Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4D

Orthogroup ID

OG0002316

Physical Location & Seq

Genomic Coordinates Forward (+)

17012341 .. 17056113

Gene Structure 43773 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4DG109800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1794 bp

ATGGACTCTTCCGATTCAACACCACTCCTTCGCCCACAACACCATCCATCACAACGCTCCTCCCCCCCGAACGCTTATTCCTCATACTCTTCCATCTCTCTCGAAATGACCTCCGCCGTCTCCGCCACCCCCACCCCCACCGCCCGCTCCGTCTTCCTCGGCGTCGACGTCGGCACCGGCAGCGCCCGCGCAGGTGTGTTTGATGAGAATGGGAAGCTTCTAGGTTCGTCTAGCAGTCCCATTCAGATTTGGAAGGACGGTGATTGCGTTGAGCAATCTTCGACGGATATCTGGCATGCAATAAGTGCGGCTGTAAAAGCAGCATGCTCCCTTGCAGAGGTTTCCGGGGATGAAGTGAAGGGTCTGGGATTCGCGGCTACTTGTTCATTAGTTGCAGTGGACGCCGATGGCTCTCCTGTTACAGTTTCCTGGAGTGGTGATTCAAGGAGAAACATAATAGTATGGATGGACCATAGAGCTGTAGAACAAGCTGAAAGGATCAATTCACGCAACTCACCCGTCCTGCAGTACTGTGGTGGAGCTCTTTCCCCTGAGATGCAGCCTCCAAAGCTTTTATGGGTGAAAGAAAATCTGCCAGAATCTTGGTCAATGGTCTTCAGGTGGATGGACTTGAGTGATTGGTTATCATACAGGGCCACAGGAGATGATACGCGTAGTCTCTGTACAACAGTTTGTAAATGGACATATCTTGGTCATGCACATATGCAGCAAAACAATGAGAAAGATTCTCGAGACATGGAAGCTTGTGGATGGGATGATGATTTCTGGGAGGAGATTGGATTAGGTGATCTTGTAGAAGGGCATCATGCTAAGATAGGACGAAGTGTAGCCTTCCCTGGCCATCCTCTGGGTTCTGGTCTCACATCTACTGCTGCGAAGGAACTAGGTCTTGCACCCGGGATTCCTGTTGGGACTTCGCTAATTGATGCTCATGCTGGTGGTGTGGGGGTATTGGAAGGTGTGCCTTCATCAGATTCTCACCCTAAAGAGTCTGATATTGAAGCTCTATGCCATCGTATGGTGTTAGTCTGTGGAACTTCTACTTGCCATATGGTTGTATCACAGAAGAAGCTTTTCATTCCAGGTGTCTGGGGTCCGTATTGGTCAGCTATGGTACCTGAACAGTGGCTTACAGAAGGTGGTCAGAGTGCTACTGGTGCATTATTGGATTACATAATTGAAAACCATGTTGCTTCTCCTCACCTTGCCAATCGTGCTGCTTCTCAACGCATTTCTGTATTTGAGCTTCTGAACAAGATATTGGAAACAATGATGCATGATCTGAAGCGTCCGTTCCTTGCTTCTTTGACCGAAGATATTCATGTTCTTCCTGATTTTCATGGGAACAGGTCGCCAATTGCGGATCCAAAAGCAAAAGGAATTATCTGTGGTTTAACACTTGATACAAGTGAGAAGCAATTGGCACTTCAGTACCTCTCCACACTGCAAGGTATTGCATATGGCACTCGCCATATTGTAGAGCATTGCAATGCCCAGGGTCACAAAATTGACACTATACTAGCATGTGGAGGCCTTGTTAAGAACCCACTATTCATACAAGAACACGCAGATATAATCGGTTGCCCTATTATTCTTCCACAGGAGAGTGAGCCTGTGCTATTGGGTGCTGCCATTCTTGGTGCTGTAGCTGCAAGGAAATATTCTAGTATGCATGATGCCATGAAGGCCCTAAATGCGTCGGGGCAGTCAGTTTTGAATGCTGGTGATAGATCAGGAAGTTCACCAATTGTTTTCTCTAAGAAGCCTATATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FGGY_C FGGY_N

Protein Analysis

597

Amino Acids

64.05

Weight (kDa)

5.61

Isoelectric Point (pI)

52.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FGGY_N	PF00370	52 - 323	3.9e-23	FGGY family of carbohydrate kinases, N-terminal domain
FGGY_C	PF02782	348 - 558	3.2e-57	FGGY family of carbohydrate kinases, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002316)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G30310 AT4G30310 AT4G30310 AT4G30310
fragaria_vesca	FvH4_4g09080 FvH4_4g09080 FvH4_4g09080 FvH4_4g09080 FvH4_4g09080 FvH4_4g09080 FvH4_4g09080
malus_domestica	MD13G1267100.v1.1
prunus_persica	Prupe.1G089400_v2.0.a1 Prupe.1G089400_v2.0.a1
pyrus_communis	pycom13g22860
rosa_chinensis	RchiOBHm_Chr4g0403081 RchiOBHm_Chr4g0405011 RchiOBHm_Chr4g0405021
rosa_laevigata	RLG00000009027
rosa_multiflora	Rmu_co8073462.1_g000001 Rmu_co8189736.1_g000001 Rmu_sc0000225.1_g000012 Rmu_sc0001023.1_g000030 Rmu_ssc0000127.1_g000034
rosa_roxburghii	Rroxscaffold_5G00347760
rosa_rugosa	Rorug04G0040500 Rorug04G0052000 Rorug04G0052100
rosa_samantha	Rh4AG117900 Rh4AG127000 Rh4AG127200 Rh4BG110300 Rh4BG121100 Rh4CG124700 Rh4CG135100 Rh4CG135200 Rh4DG109800 Rh4DG110300 Rh4DG121400
rosa_wichuraiana	Rw4G009430 Rw4G009520 Rw4G010310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	182
AatII	GACGTC	1 cut(s)	171
Acc36I	ACCTGC	1 cut(s)	182
Acc65I	GGTACC	1 cut(s)	1135
AccB1I	GGYRCC	2 cut(s)	173, 1135
AccB7I	CCANNNNNTGG	2 cut(s)	868, 1039
AccBSI	CCGCTC	1 cut(s)	147
AccI	GTMKAC	1 cut(s)	165
AccII	CGCG	3 cut(s)	189, 374, 673
AciI	CCGC	8 cut(s)	114, 123, 141, 145, 187, 308, 374, 1382
AclWI	GGATC	3 cut(s)	506, 1379, 1392
AcoI	YGGCCR	1 cut(s)	859
AcuI	CTGAAG	3 cut(s)	601, 1325, 1433
AcyI	GRCGYC	3 cut(s)	162, 168, 402
AfaI	GTAC	4 cut(s)	530, 685, 1137, 1454
AfiI	CCNNNNNNNGG	3 cut(s)	337, 868, 1039
AflIII	ACRYGT	1 cut(s)	671
AgsI	TTSAA	5 cut(s)	18, 444, 1022, 1202, 1738
AjnI	CCWGG	4 cut(s)	428, 856, 1102, 1515
AjuI	GAANNNNNNNTTGG	2 cut(s)	1265, 1297
AloI	GAACNNNNNNTCC	2 cut(s)	62, 94
Alw21I	GWGCWC	1 cut(s)	544
Alw26I	GTCTC	4 cut(s)	124, 683, 747, 884
AlwI	GGATC	3 cut(s)	506, 1379, 1392
Ama87I	CYCGRG	2 cut(s)	750, 917
AoxI	GGCC	4 cut(s)	654, 859, 1552, 1707
ApeKI	GCWGC	8 cut(s)	180, 320, 559, 727, 893, 1238, 1649, 1670
Asp700I	GAANNNNTTC	2 cut(s)	1094, 1338
Asp718I	GGTACC	1 cut(s)	1135
AspLEI	GCGC	2 cut(s)	185, 191
AspS9I	GGNCC	4 cut(s)	469, 654, 1115, 1708
AsuC2I	CCSGG	3 cut(s)	346, 918, 919
AsuHPI	GGTGA	9 cut(s)	272, 449, 507, 592, 818, 992, 1214, 1755, 1757
AvaI	CYCGRG	2 cut(s)	750, 917
AvaII	GGWCC	2 cut(s)	469, 1115
BaeI	ACNNNNGTAYC	2 cut(s)	1436, 1469
BalI	TGGCCA	1 cut(s)	861
BamHI	GGATCC	1 cut(s)	1384
BanI	GGYRCC	2 cut(s)	173, 1135
BanII	GRGCYC	1 cut(s)	544
BarI	GAAGNNNNNNTAC	2 cut(s)	1251, 1283
BbsI	GAAGAC	2 cut(s)	145, 607
Bbv12I	GWGCWC	1 cut(s)	544
BbvI	GCAGC	8 cut(s)	192, 332, 571, 739, 880, 1225, 1636, 1657
BccI	CCATC	9 cut(s)	51, 55, 101, 401, 460, 619, 765, 870, 1041
BceAI	ACGGC	1 cut(s)	101
BciT130I	CCWGG	4 cut(s)	430, 858, 1104, 1517
BcnI	CCSGG	3 cut(s)	346, 918, 919
BcoDI	GTCTC	4 cut(s)	124, 683, 747, 884
BfaI	CTAG	5 cut(s)	221, 231, 905, 1541, 1686
BfmI	CTRYAG	3 cut(s)	480, 524, 1665
BfoI	RGCGCY	1 cut(s)	186
BfuAI	ACCTGC	1 cut(s)	182
BglI	GCCNNNNNGGC	1 cut(s)	1706
BmcAI	AGTACT	1 cut(s)	530
Bme1390I	CCNGG	7 cut(s)	346, 430, 858, 918, 919, 1104, 1517
Bme18I	GGWCC	2 cut(s)	469, 1115
BmeT110I	CYCGRG	2 cut(s)	750, 917
BmgT120I	GGNCC	4 cut(s)	469, 654, 1115, 1708
BmiI	GGNNCC	4 cut(s)	175, 1116, 1137, 1386
BmrFI	CCNGG	7 cut(s)	346, 430, 858, 918, 919, 1104, 1517
BmsI	GCATC	5 cut(s)	546, 832, 937, 1284, 1687
BpiI	GAAGAC	2 cut(s)	145, 607
BpmI	CTGGAG	1 cut(s)	451
BpuEI	CTTGAG	1 cut(s)	652
BpuMI	CCSGG	3 cut(s)	346, 918, 919
BsaHI	GRCGYC	3 cut(s)	162, 168, 402
BsaI	GGTCTC	1 cut(s)	884
BsaJI	CCNNGG	6 cut(s)	157, 345, 856, 917, 1515, 1516
BsaXI	ACNNNNNCTCC	2 cut(s)	1542, 1572
Bsc4I	CCNNNNNNNGG	3 cut(s)	337, 868, 1039
Bse118I	RCCGGY	1 cut(s)	176
Bse1I	ACTGG	1 cut(s)	1180
Bse3DI	GCAATG	2 cut(s)	1504, 1516
BseBI	CCWGG	4 cut(s)	430, 858, 1104, 1517
BseDI	CCNNGG	6 cut(s)	157, 345, 856, 917, 1515, 1516
BseGI	GGATG	7 cut(s)	43, 355, 471, 630, 776, 781, 862
BseLI	CCNNNNNNNGG	3 cut(s)	337, 868, 1039
BseMI	GCAATG	2 cut(s)	1504, 1516
BseMII	CTCAG	1 cut(s)	543
BseNI	ACTGG	1 cut(s)	1180
BseRI	GAGGAG	3 cut(s)	49, 806, 1209
BseXI	GCAGC	8 cut(s)	192, 332, 571, 739, 880, 1225, 1636, 1657
Bsh1236I	CGCG	3 cut(s)	189, 374, 673
BshFI	GGCC	4 cut(s)	656, 861, 1554, 1709
BshNI	GGYRCC	2 cut(s)	173, 1135
BsiHKAI	GWGCWC	1 cut(s)	544
BsiHKCI	CYCGRG	2 cut(s)	750, 917
BsiSI	CCGG	3 cut(s)	177, 345, 918
BslFI	GGGAC	2 cut(s)	222, 946
BslI	CCNNNNNNNGG	3 cut(s)	337, 868, 1039
BsmAI	GTCTC	4 cut(s)	124, 683, 747, 884
BsmBI	CGTCTC	1 cut(s)	124
BsmFI	GGGAC	2 cut(s)	222, 946
BsmI	GAATGC	1 cut(s)	1744
BsnI	GGCC	4 cut(s)	656, 861, 1554, 1709
Bso31I	GGTCTC	1 cut(s)	884
BsoBI	CYCGRG	2 cut(s)	750, 917
Bsp1286I	GDGCHC	1 cut(s)	544
Bsp1407I	TGTACA	1 cut(s)	683
Bsp143I	GATC	5 cut(s)	498, 808, 1300, 1384, 1751
BspACI	CCGC	8 cut(s)	114, 123, 141, 145, 187, 308, 374, 1382
BspANI	GGCC	4 cut(s)	656, 861, 1554, 1709
BspCNI	CTCAG	1 cut(s)	544
BspFNI	CGCG	3 cut(s)	189, 374, 673
BspLI	GGNNCC	4 cut(s)	175, 1116, 1137, 1386
BspMAI	CTGCAG	1 cut(s)	528
BspMI	ACCTGC	1 cut(s)	182
BspPI	GGATC	3 cut(s)	506, 1379, 1392
BspT107I	GGYRCC	2 cut(s)	173, 1135
BspTNI	GGTCTC	1 cut(s)	884
BsrBI	CCGCTC	1 cut(s)	147
BsrDI	GCAATG	2 cut(s)	1504, 1516
BsrFI	RCCGGY	1 cut(s)	176
BsrGI	TGTACA	1 cut(s)	683
BsrI	ACTGG	1 cut(s)	1180
BssAI	RCCGGY	1 cut(s)	176
BssECI	CCNNGG	6 cut(s)	157, 345, 856, 917, 1515, 1516
BssMI	GATC	5 cut(s)	498, 808, 1300, 1384, 1751
BssNI	GRCGYC	3 cut(s)	162, 168, 402
Bst2UI	CCWGG	4 cut(s)	430, 858, 1104, 1517
Bst4CI	ACNGT	5 cut(s)	260, 424, 533, 691, 1146
Bst6I	CTCTTC	2 cut(s)	13, 94
BstACI	GRCGYC	3 cut(s)	162, 168, 402
BstAPI	GCANNNNNTGC	1 cut(s)	305
BstAUI	TGTACA	1 cut(s)	683
BstC8I	GCNNGC	4 cut(s)	145, 187, 297, 325
BstDEI	CTNAG	3 cut(s)	552, 831, 1779
BstENI	CCTNNNNNAGG	1 cut(s)	335
BstF5I	GGATG	7 cut(s)	43, 355, 471, 630, 776, 781, 862
BstFNI	CGCG	3 cut(s)	189, 374, 673
BstH2I	RGCGCY	1 cut(s)	186
BstHHI	GCGC	2 cut(s)	185, 191
BstKTI	GATC	5 cut(s)	501, 811, 1303, 1387, 1754
BstMAI	GTCTC	4 cut(s)	124, 683, 747, 884
BstMBI	GATC	5 cut(s)	498, 808, 1300, 1384, 1751
BstNI	CCWGG	4 cut(s)	430, 858, 1104, 1517
BstNSI	RCATGY	3 cut(s)	299, 327, 1548
BstSCI	CCNGG	7 cut(s)	344, 428, 856, 916, 917, 1102, 1515
BstSFI	CTRYAG	3 cut(s)	480, 524, 1665
BstUI	CGCG	3 cut(s)	189, 374, 673
BstV1I	GCAGC	8 cut(s)	192, 332, 571, 739, 880, 1225, 1636, 1657
BstV2I	GAAGAC	2 cut(s)	145, 607
BstX2I	RGATCY	1 cut(s)	1384
BstXI	CCANNNNNNTGG	2 cut(s)	603, 1110
BstYI	RGATCY	1 cut(s)	1384
BsuRI	GGCC	4 cut(s)	656, 861, 1554, 1709
BtsCI	GGATG	7 cut(s)	43, 355, 471, 630, 776, 781, 862
BtsI	GCAGTG	2 cut(s)	402, 1463
BtsIMutI	CAGTG	3 cut(s)	402, 1151, 1463
BveI	ACCTGC	1 cut(s)	182
Cac8I	GCNNGC	4 cut(s)	145, 187, 297, 325
CfoI	GCGC	2 cut(s)	185, 191
Cfr10I	RCCGGY	1 cut(s)	176
Cfr13I	GGNCC	4 cut(s)	469, 654, 1115, 1708
Cfr9I	CCCGGG	1 cut(s)	917
CseI	GACGC	4 cut(s)	151, 410, 1298, 1707
Csp6I	GTAC	4 cut(s)	529, 684, 1136, 1453
CviQI	GTAC	4 cut(s)	529, 684, 1136, 1453
DdeI	CTNAG	3 cut(s)	552, 831, 1779
DpnI	GATC	5 cut(s)	500, 810, 1302, 1386, 1753
DpnII	GATC	5 cut(s)	498, 808, 1300, 1384, 1751
EaeI	YGGCCR	1 cut(s)	859
Eam1104I	CTCTTC	2 cut(s)	13, 94
EarI	CTCTTC	2 cut(s)	13, 94
EciI	GGCGGA	2 cut(s)	103, 112
Ecl136II	GAGCTC	1 cut(s)	542
Eco147I	AGGCCT	1 cut(s)	1554
Eco24I	GRGCYC	1 cut(s)	544
Eco31I	GGTCTC	1 cut(s)	884
Eco32I	GATATC	1 cut(s)	289
Eco47I	GGWCC	2 cut(s)	469, 1115
Eco53kI	GAGCTC	1 cut(s)	542
Eco57I	CTGAAG	3 cut(s)	601, 1325, 1433
Eco88I	CYCGRG	2 cut(s)	750, 917
EcoICRI	GAGCTC	1 cut(s)	542
EcoNI	CCTNNNNNAGG	1 cut(s)	335
EcoO109I	RGGNCCY	1 cut(s)	1708
EcoRII	CCWGG	4 cut(s)	428, 856, 1102, 1515
EcoRV	GATATC	1 cut(s)	289
EcoT22I	ATGCAT	2 cut(s)	1299, 1695
EcoT38I	GRGCYC	1 cut(s)	544
Esp3I	CGTCTC	1 cut(s)	124
FaqI	GGGAC	2 cut(s)	222, 946
FauI	CCCGC	2 cut(s)	152, 194
FauNDI	CATATG	3 cut(s)	723, 1071, 1480
FblI	GTMKAC	1 cut(s)	165
FokI	GGATG	7 cut(s)	30, 362, 478, 637, 783, 788, 849
FriOI	GRGCYC	1 cut(s)	544
FspBI	CTAG	5 cut(s)	221, 231, 905, 1541, 1686
GlaI	GCGC	2 cut(s)	184, 190
GsuI	CTGGAG	1 cut(s)	451
HaeII	RGCGCY	1 cut(s)	186
HaeIII	GGCC	4 cut(s)	656, 861, 1554, 1709
HapII	CCGG	3 cut(s)	177, 345, 918
HgaI	GACGC	4 cut(s)	151, 410, 1298, 1707
HhaI	GCGC	2 cut(s)	185, 191
Hin1I	GRCGYC	3 cut(s)	162, 168, 402
Hin6I	GCGC	2 cut(s)	183, 189
HinP1I	GCGC	2 cut(s)	183, 189
HincII	GTYRAC	1 cut(s)	166
HindII	GTYRAC	1 cut(s)	166
HindIII	AAGCTT	4 cut(s)	215, 569, 762, 1091
HinfI	GANTC	9 cut(s)	5, 14, 369, 440, 599, 746, 922, 995, 1010
HpaII	CCGG	3 cut(s)	177, 345, 918
HphI	GGTGA	9 cut(s)	272, 449, 507, 592, 818, 992, 1214, 1755, 1757
Hpy166II	GTNNAC	3 cut(s)	166, 400, 1763
Hpy188I	TCNGA	7 cut(s)	13, 246, 994, 1015, 1167, 1272, 1305
Hpy188III	TCNNGA	5 cut(s)	101, 750, 752, 1352, 1755
Hpy8I	GTNNAC	3 cut(s)	166, 400, 1763
Hpy99I	CGWCG	5 cut(s)	167, 170, 173, 286, 1723
HpyCH4III	ACNGT	5 cut(s)	260, 424, 533, 691, 1146
HpyCH4IV	ACGT	1 cut(s)	168
HpyF3I	CTNAG	3 cut(s)	552, 831, 1779
HpySE526I	ACGT	1 cut(s)	168
Hsp92I	GRCGYC	3 cut(s)	162, 168, 402
HspAI	GCGC	2 cut(s)	183, 189
KpnI	GGTACC	1 cut(s)	1139
Kzo9I	GATC	5 cut(s)	498, 808, 1300, 1384, 1751
LmnI	GCTCC	4 cut(s)	62, 152, 332, 539
Lsp1109I	GCAGC	8 cut(s)	192, 332, 571, 739, 880, 1225, 1636, 1657
LweI	GCATC	5 cut(s)	546, 832, 937, 1284, 1687
MaeI	CTAG	5 cut(s)	221, 231, 905, 1541, 1686
MaeII	ACGT	1 cut(s)	168
MaeIII	GTNAC	2 cut(s)	418, 1520
MalI	GATC	5 cut(s)	500, 810, 1302, 1386, 1753
MbiI	CCGCTC	1 cut(s)	147
MboI	GATC	5 cut(s)	498, 808, 1300, 1384, 1751
MboII	GAAGA	8 cut(s)	81, 145, 270, 607, 1099, 1340, 1346, 1607
MfeI	CAATTG	3 cut(s)	1377, 1439, 1767
MflI	RGATCY	1 cut(s)	1384
MhlI	GDGCHC	1 cut(s)	544
MlsI	TGGCCA	1 cut(s)	861
MluCI	AATT	8 cut(s)	502, 942, 1197, 1377, 1401, 1439, 1527, 1767
MluI	ACGCGT	1 cut(s)	671
MluNI	TGGCCA	1 cut(s)	861
MlyI	GAGTC	1 cut(s)	1019
Mox20I	TGGCCA	1 cut(s)	861
Mph1103I	ATGCAT	2 cut(s)	1299, 1695
MroXI	GAANNNNTTC	2 cut(s)	1094, 1338
MscI	TGGCCA	1 cut(s)	861
MseI	TTAA	2 cut(s)	1415, 1560
MslI	CAYNNNNRTG	2 cut(s)	957, 1509
Msp20I	TGGCCA	1 cut(s)	861
MspI	CCGG	3 cut(s)	177, 345, 918
MspR9I	CCNGG	7 cut(s)	346, 430, 858, 918, 919, 1104, 1517
MunI	CAATTG	3 cut(s)	1377, 1439, 1767
Mva1269I	GAATGC	1 cut(s)	1744
MvaI	CCWGG	4 cut(s)	430, 858, 1104, 1517
MvnI	CGCG	3 cut(s)	189, 374, 673
NciI	CCSGG	3 cut(s)	346, 918, 919
NdeI	CATATG	3 cut(s)	723, 1071, 1480
NdeII	GATC	5 cut(s)	498, 808, 1300, 1384, 1751
NlaIV	GGNNCC	4 cut(s)	175, 1116, 1137, 1386
NmeAIII	GCCGAG	1 cut(s)	138
NmuCI	GTSAC	1 cut(s)	1520
NsiI	ATGCAT	2 cut(s)	1299, 1695
NspI	RCATGY	3 cut(s)	299, 327, 1548
PaeI	GCATGC	2 cut(s)	299, 327
PaeR7I	CTCGAG	1 cut(s)	750
PaqCI	CACCTGC	1 cut(s)	182
PasI	CCCWGGG	1 cut(s)	1516
PceI	AGGCCT	1 cut(s)	1554
PcsI	WCGNNNNNNNCGW	2 cut(s)	165, 264
PctI	GAATGC	1 cut(s)	1744
PdmI	GAANNNNTTC	2 cut(s)	1094, 1338
PfeI	GAWTC	7 cut(s)	14, 369, 440, 599, 746, 922, 995
PflMI	CCANNNNNTGG	2 cut(s)	868, 1039
PfoI	TCCNGGA	1 cut(s)	428
PleI	GAGTC	1 cut(s)	1018
PpsI	GAGTC	1 cut(s)	1018
Psp124BI	GAGCTC	1 cut(s)	544
Psp6I	CCWGG	4 cut(s)	428, 856, 1102, 1515
PspGI	CCWGG	4 cut(s)	428, 856, 1102, 1515
PspN4I	GGNNCC	4 cut(s)	175, 1116, 1137, 1386
PspPI	GGNCC	4 cut(s)	469, 654, 1115, 1708
PstI	CTGCAG	1 cut(s)	528
PsuI	RGATCY	1 cut(s)	1384
RsaI	GTAC	4 cut(s)	530, 685, 1137, 1454
RsaNI	GTAC	4 cut(s)	529, 684, 1136, 1453
RseI	CAYNNNNRTG	2 cut(s)	957, 1509
SacI	GAGCTC	1 cut(s)	544
SalI	GTCGAC	1 cut(s)	164
SaqAI	TTAA	2 cut(s)	1415, 1560
Sau3AI	GATC	5 cut(s)	498, 808, 1300, 1384, 1751
Sau96I	GGNCC	4 cut(s)	469, 654, 1115, 1708
ScaI	AGTACT	1 cut(s)	530
SchI	GAGTC	1 cut(s)	1019
ScrFI	CCNGG	7 cut(s)	346, 430, 858, 918, 919, 1104, 1517
SduI	GDGCHC	1 cut(s)	544
SfaNI	GCATC	5 cut(s)	546, 832, 937, 1284, 1687
SfcI	CTRYAG	3 cut(s)	480, 524, 1665
Sfr274I	CTCGAG	1 cut(s)	750
SgrDI	CGTCGACG	1 cut(s)	164
SinI	GGWCC	2 cut(s)	469, 1115
SlaI	CTCGAG	1 cut(s)	750
SmaI	CCCGGG	1 cut(s)	919
SmiMI	CAYNNNNRTG	2 cut(s)	957, 1509
SmlI	CTYRAG	2 cut(s)	631, 750
SmoI	CTYRAG	2 cut(s)	631, 750
SphI	GCATGC	2 cut(s)	299, 327
Sse9I	AATT	8 cut(s)	502, 942, 1197, 1377, 1401, 1439, 1527, 1767
SseBI	AGGCCT	1 cut(s)	1554
SsiI	CCGC	8 cut(s)	114, 123, 141, 145, 187, 308, 374, 1382
SspI	AATATT	1 cut(s)	1682
SspMI	CTAG	5 cut(s)	221, 231, 905, 1541, 1686
SstI	GAGCTC	1 cut(s)	544
StuI	AGGCCT	1 cut(s)	1554
StyD4I	CCNGG	7 cut(s)	344, 428, 856, 916, 917, 1102, 1515
TaaI	ACNGT	5 cut(s)	260, 424, 533, 691, 1146
TaiI	ACGT	1 cut(s)	171
TaqI	TCGA	4 cut(s)	102, 165, 281, 751
TaqII	GACCGA	1 cut(s)	1346
TasI	AATT	8 cut(s)	502, 942, 1197, 1377, 1401, 1439, 1527, 1767
TatI	WGTACW	2 cut(s)	528, 683
TauI	GCSGC	2 cut(s)	311, 377
TfiI	GAWTC	7 cut(s)	14, 369, 440, 599, 746, 922, 995
Tru1I	TTAA	2 cut(s)	1415, 1560
Tru9I	TTAA	2 cut(s)	1415, 1560
TscAI	CASTG	3 cut(s)	402, 1151, 1470
TseFI	GTSAC	1 cut(s)	1520
TseI	GCWGC	8 cut(s)	180, 320, 559, 727, 893, 1238, 1649, 1670
Tsp45I	GTSAC	1 cut(s)	1520
TspDTI	ATGAA	8 cut(s)	366, 375, 978, 1087, 1331, 1349, 1564, 1718
TspGWI	ACGGA	4 cut(s)	139, 299, 1107, 1302
TspMI	CCCGGG	1 cut(s)	917
TspRI	CASTG	3 cut(s)	402, 1151, 1470
Van91I	CCANNNNNTGG	2 cut(s)	868, 1039
VpaK11BI	GGWCC	2 cut(s)	469, 1115
XagI	CCTNNNNNAGG	1 cut(s)	335
XceI	RCATGY	3 cut(s)	299, 327, 1548
XcmI	CCANNNNNNNNNTGG	1 cut(s)	573
XhoI	CTCGAG	1 cut(s)	750
XmaI	CCCGGG	1 cut(s)	917
XmiI	GTMKAC	1 cut(s)	165
XmnI	GAANNNNTTC	2 cut(s)	1094, 1338
XspI	CTAG	5 cut(s)	221, 231, 905, 1541, 1686
ZraI	GACGTC	1 cut(s)	169
ZrmI	AGTACT	1 cut(s)	530
Zsp2I	ATGCAT	2 cut(s)	1299, 1695

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.