Rh4CG135100

FGGY carbohydrate kinase domain-containing

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4C
OG0002316
Physical Location & Seq
Forward (+)
26720301 .. 26723336
3036 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4CG135100.1

Sequence Viewer

Length: 798 bp
ATGTCTGGTAAATGGACTCGTTCCAATCCAACACCATCCATCACAACGCTCCTCCCCCTCAAACGCTTATTCCTCATACTCCTCTATCTCTCTCGAAATGACCTCCGCCGTCGCGCAGGTGTGTTTGATGAGAATGGGAAGCTTCTAGGTTCGTCTAGCAGTCCGATTCAGATTTGGAAGGACGCATGCTCCCTTGCAGAAGTTTCCGGGGATGAGGTGAAGGGTCTGGGATTTGCGGCTACTTGTTCACTAGTTGCAGTGGATGCTGATGGCTCTCCTGTTACGGTTTCCTGGAGTGGTGATTCAAGAAGAAACATAATAGTATGGATGGGCCATAGAGCTGTAGAACAAGCTGAAAGGATCAATTCACGCAACTCACCCGTCCTGCAGTACTGTGGTGGAGCTCTTTCCCCTGAGATGCAGCCTCCAAAGCTTTTATGGGTGAAAGAAAATCTGCCAGAATCTTGGTCAATGGTCTTCAGGTGGATGGACTTGAGTGATTGGTTATCATACAGGGCCACAGGAGATGATACACGTAGTCTCTGTACAACAGTTTGCAAATGGACATATCTTGGGCATCATGCTAAGATAGGACGAATTGTAGCCTTCCCTGGCCATCCTCTGGGTCCGTGGCGCTCCCTTGAGGAACTAGGTCTTGTAGCAGGGATTCCTGTTGGGACTTCGCTAATTGATGCTCATGCCGGTGGTGTGGGGGTATGGAAAGTGTGCCTTCATCAGATTCTCGGCCTAAAGGTTGCCAAGGCTGATCCATTTTGCTTTTTTATTTATTCTAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FGGY_C FGGY_N

Protein Analysis

265

Amino Acids

29.18

Weight (kDa)

8.85

Isoelectric Point (pI)

52.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FGGY_N PF00370 57 - 176 6.4e-08 FGGY family of carbohydrate kinases, N-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 107
Acc36I ACCTGC 1 cut(s) 107
AccB7I CCANNNNNTGG 1 cut(s) 622
AccII CGCG 1 cut(s) 114
AciI CCGC 2 cut(s) 106, 236
AclWI GGATC 2 cut(s) 368, 761
AcoI YGGCCR 1 cut(s) 613
AcuI CTGAAG 1 cut(s) 463
AfaI GTAC 2 cut(s) 392, 547
AfiI CCNNNNNNNGG 1 cut(s) 622
AflIII ACRYGT 1 cut(s) 533
AgsI TTSAA 1 cut(s) 306
AhlI ACTAGT 1 cut(s) 250
AjnI CCWGG 2 cut(s) 290, 610
AluBI AGCT 5 cut(s) 142, 341, 353, 404, 433
AluI AGCT 5 cut(s) 142, 341, 353, 404, 433
Alw21I GWGCWC 1 cut(s) 406
Alw26I GTCTC 1 cut(s) 545
AlwI GGATC 2 cut(s) 368, 761
AoxI GGCC 4 cut(s) 331, 516, 613, 745
ApeKI GCWGC 1 cut(s) 421
AspLEI GCGC 2 cut(s) 116, 636
AspS9I GGNCC 3 cut(s) 331, 516, 626
AsuC2I CCSGG 1 cut(s) 208
AsuHPI GGTGA 4 cut(s) 229, 311, 369, 454
AvaII GGWCC 1 cut(s) 626
BalI TGGCCA 1 cut(s) 615
BanII GRGCYC 1 cut(s) 406
BbsI GAAGAC 1 cut(s) 469
Bbv12I GWGCWC 1 cut(s) 406
BbvI GCAGC 1 cut(s) 433
BccI CCATC 6 cut(s) 43, 47, 263, 322, 481, 624
BceAI ACGGC 1 cut(s) 93
BciT130I CCWGG 2 cut(s) 292, 612
BcnI CCSGG 1 cut(s) 208
BcoDI GTCTC 1 cut(s) 545
BcuI ACTAGT 1 cut(s) 250
BfaI CTAG 4 cut(s) 146, 156, 251, 650
BfmI CTRYAG 2 cut(s) 342, 386
BfoI RGCGCY 1 cut(s) 637
BfuAI ACCTGC 1 cut(s) 107
BisI GCNGC 2 cut(s) 237, 422
BlsI GCNGC 2 cut(s) 238, 423
BmcAI AGTACT 1 cut(s) 392
Bme1390I CCNGG 3 cut(s) 208, 292, 612
Bme18I GGWCC 1 cut(s) 626
BmgT120I GGNCC 3 cut(s) 331, 516, 626
BmiI GGNNCC 1 cut(s) 627
BmrFI CCNGG 3 cut(s) 208, 292, 612
BmsI GCATC 4 cut(s) 253, 408, 586, 682
BpiI GAAGAC 1 cut(s) 469
BpmI CTGGAG 1 cut(s) 313
BpuEI CTTGAG 2 cut(s) 514, 662
BpuMI CCSGG 1 cut(s) 208
BsaAI YACGTR 1 cut(s) 536
BsaJI CCNNGG 4 cut(s) 207, 610, 629, 759
BsaXI ACNNNNNCTCC 2 cut(s) 173, 203
Bsc4I CCNNNNNNNGG 1 cut(s) 622
Bse118I RCCGGY 1 cut(s) 701
BseBI CCWGG 2 cut(s) 292, 612
BseDI CCNNGG 4 cut(s) 207, 610, 629, 759
BseGI GGATG 6 cut(s) 35, 217, 268, 333, 492, 616
BseLI CCNNNNNNNGG 1 cut(s) 622
BseMII CTCAG 1 cut(s) 405
BseRI GAGGAG 2 cut(s) 41, 71
BseXI GCAGC 1 cut(s) 433
Bsh1236I CGCG 1 cut(s) 114
BshFI GGCC 4 cut(s) 333, 518, 615, 747
BsiHKAI GWGCWC 1 cut(s) 406
BsiSI CCGG 2 cut(s) 207, 702
BslFI GGGAC 1 cut(s) 691
BslI CCNNNNNNNGG 1 cut(s) 622
BsmAI GTCTC 1 cut(s) 545
BsmFI GGGAC 1 cut(s) 691
BsnI GGCC 4 cut(s) 333, 518, 615, 747
Bsp1286I GDGCHC 1 cut(s) 406
Bsp1407I TGTACA 1 cut(s) 545
Bsp143I GATC 2 cut(s) 360, 766
BspACI CCGC 2 cut(s) 106, 236
BspANI GGCC 4 cut(s) 333, 518, 615, 747
BspCNI CTCAG 1 cut(s) 406
BspFNI CGCG 1 cut(s) 114
BspLI GGNNCC 1 cut(s) 627
BspMAI CTGCAG 1 cut(s) 390
BspMI ACCTGC 1 cut(s) 107
BspPI GGATC 2 cut(s) 368, 761
BsrFI RCCGGY 1 cut(s) 701
BsrGI TGTACA 1 cut(s) 545
BssAI RCCGGY 1 cut(s) 701
BssECI CCNNGG 4 cut(s) 207, 610, 629, 759
BssMI GATC 2 cut(s) 360, 766
BssT1I CCWWGG 1 cut(s) 759
Bst2UI CCWGG 2 cut(s) 292, 612
Bst4CI ACNGT 3 cut(s) 286, 395, 553
BstAPI GCANNNNNTGC 1 cut(s) 263
BstAUI TGTACA 1 cut(s) 545
BstBAI YACGTR 1 cut(s) 536
BstC8I GCNNGC 1 cut(s) 187
BstDEI CTNAG 2 cut(s) 414, 585
BstDSI CCRYGG 1 cut(s) 629
BstF5I GGATG 6 cut(s) 35, 217, 268, 333, 492, 616
BstFNI CGCG 1 cut(s) 114
BstH2I RGCGCY 1 cut(s) 637
BstHHI GCGC 2 cut(s) 116, 636
BstKTI GATC 2 cut(s) 363, 769
BstMAI GTCTC 1 cut(s) 545
BstMBI GATC 2 cut(s) 360, 766
BstMWI GCNNNNNNNGC 2 cut(s) 263, 430
BstNI CCWGG 2 cut(s) 292, 612
BstNSI RCATGY 1 cut(s) 189
BstSCI CCNGG 3 cut(s) 206, 290, 610
BstSFI CTRYAG 2 cut(s) 342, 386
BstUI CGCG 1 cut(s) 114
BstV1I GCAGC 1 cut(s) 433
BstV2I GAAGAC 1 cut(s) 469
BstXI CCANNNNNNTGG 1 cut(s) 465
BsuRI GGCC 4 cut(s) 333, 518, 615, 747
BtgI CCRYGG 1 cut(s) 629
BtsCI GGATG 6 cut(s) 35, 217, 268, 333, 492, 616
BtsI GCAGTG 1 cut(s) 264
BtsIMutI CAGTG 1 cut(s) 264
BveI ACCTGC 1 cut(s) 107
Cac8I GCNNGC 1 cut(s) 187
CfoI GCGC 2 cut(s) 116, 636
Cfr10I RCCGGY 1 cut(s) 701
Cfr13I GGNCC 3 cut(s) 331, 516, 626
CseI GACGC 1 cut(s) 191
Csp6I GTAC 2 cut(s) 391, 546
CviAII CATG 3 cut(s) 186, 581, 698
CviQI GTAC 2 cut(s) 391, 546
DdeI CTNAG 2 cut(s) 414, 585
DpnI GATC 2 cut(s) 362, 768
DpnII GATC 2 cut(s) 360, 766
EaeI YGGCCR 1 cut(s) 613
EciI GGCGGA 1 cut(s) 95
Ecl136II GAGCTC 1 cut(s) 404
Eco130I CCWWGG 1 cut(s) 759
Eco24I GRGCYC 1 cut(s) 406
Eco47I GGWCC 1 cut(s) 626
Eco53kI GAGCTC 1 cut(s) 404
Eco57I CTGAAG 1 cut(s) 463
EcoICRI GAGCTC 1 cut(s) 404
EcoRII CCWGG 2 cut(s) 290, 610
EcoT14I CCWWGG 1 cut(s) 759
EcoT38I GRGCYC 1 cut(s) 406
ErhI CCWWGG 1 cut(s) 759
FaeI CATG 3 cut(s) 189, 584, 701
FalI AAGNNNNNCTT 2 cut(s) 714, 746
FaqI GGGAC 1 cut(s) 691
FatI CATG 3 cut(s) 185, 580, 697
Fnu4HI GCNGC 2 cut(s) 237, 422
FokI GGATG 6 cut(s) 22, 224, 275, 340, 499, 603
FriOI GRGCYC 1 cut(s) 406
Fsp4HI GCNGC 2 cut(s) 237, 422
FspBI CTAG 4 cut(s) 146, 156, 251, 650
GlaI GCGC 2 cut(s) 115, 635
GluI GCNGC 2 cut(s) 237, 422
GsuI CTGGAG 1 cut(s) 313
HaeII RGCGCY 1 cut(s) 637
HaeIII GGCC 4 cut(s) 333, 518, 615, 747
HapII CCGG 2 cut(s) 207, 702
HgaI GACGC 1 cut(s) 191
HhaI GCGC 2 cut(s) 116, 636
Hin1II CATG 3 cut(s) 189, 584, 701
Hin6I GCGC 2 cut(s) 114, 634
HinP1I GCGC 2 cut(s) 114, 634
HindIII AAGCTT 2 cut(s) 140, 431
HinfI GANTC 6 cut(s) 16, 166, 302, 461, 667, 739
HpaII CCGG 2 cut(s) 207, 702
HphI GGTGA 4 cut(s) 229, 311, 369, 454
Hpy166II GTNNAC 1 cut(s) 248
Hpy188I TCNGA 3 cut(s) 165, 171, 738
Hpy188III TCNNGA 2 cut(s) 93, 306
Hpy8I GTNNAC 1 cut(s) 248
Hpy99I CGWCG 1 cut(s) 114
HpyAV CCTTC 4 cut(s) 172, 214, 616, 740
HpyCH4III ACNGT 3 cut(s) 286, 395, 553
HpyCH4IV ACGT 1 cut(s) 535
HpyCH4V TGCA 5 cut(s) 197, 257, 388, 421, 558
HpyF10VI GCNNNNNNNGC 2 cut(s) 263, 430
HpyF3I CTNAG 2 cut(s) 414, 585
HpySE526I ACGT 1 cut(s) 535
Hsp92II CATG 3 cut(s) 189, 584, 701
HspAI GCGC 2 cut(s) 114, 634
Kzo9I GATC 2 cut(s) 360, 766
LmnI GCTCC 4 cut(s) 54, 194, 401, 641
Lsp1109I GCAGC 1 cut(s) 433
LweI GCATC 4 cut(s) 253, 408, 586, 682
MaeI CTAG 4 cut(s) 146, 156, 251, 650
MaeII ACGT 1 cut(s) 535
MaeIII GTNAC 1 cut(s) 280
MalI GATC 2 cut(s) 362, 768
MboI GATC 2 cut(s) 360, 766
MboII GAAGA 2 cut(s) 321, 469
MhlI GDGCHC 1 cut(s) 406
MlsI TGGCCA 1 cut(s) 615
MluCI AATT 4 cut(s) 364, 597, 687, 793
MluNI TGGCCA 1 cut(s) 615
MlyI GAGTC 1 cut(s) 10
MmeI TCCRAC 1 cut(s) 53
MnlI CCTC 9 cut(s) 62, 68, 83, 92, 113, 208, 435, 630, 637
Mox20I TGGCCA 1 cut(s) 615
MscI TGGCCA 1 cut(s) 615
MseI TTAA 1 cut(s) 796
MslI CAYNNNNRTG 1 cut(s) 702
Msp20I TGGCCA 1 cut(s) 615
MspI CCGG 2 cut(s) 207, 702
MspR9I CCNGG 3 cut(s) 208, 292, 612
MvaI CCWGG 2 cut(s) 292, 612
MvnI CGCG 1 cut(s) 114
MwoI GCNNNNNNNGC 2 cut(s) 263, 430
NciI CCSGG 1 cut(s) 208
NdeII GATC 2 cut(s) 360, 766
NlaIII CATG 3 cut(s) 189, 584, 701
NlaIV GGNNCC 1 cut(s) 627
NmeAIII GCCGAG 1 cut(s) 723
NspI RCATGY 1 cut(s) 189
PaeI GCATGC 1 cut(s) 189
PaqCI CACCTGC 1 cut(s) 107
PfeI GAWTC 5 cut(s) 166, 302, 461, 667, 739
PflMI CCANNNNNTGG 1 cut(s) 622
PfoI TCCNGGA 1 cut(s) 290
PkrI GCNGC 2 cut(s) 238, 423
PleI GAGTC 1 cut(s) 10
PpsI GAGTC 1 cut(s) 10
Ppu21I YACGTR 1 cut(s) 536
Psp124BI GAGCTC 1 cut(s) 406
Psp6I CCWGG 2 cut(s) 290, 610
PspGI CCWGG 2 cut(s) 290, 610
PspN4I GGNNCC 1 cut(s) 627
PspPI GGNCC 3 cut(s) 331, 516, 626
PstI CTGCAG 1 cut(s) 390
RsaI GTAC 2 cut(s) 392, 547
RsaNI GTAC 2 cut(s) 391, 546
RseI CAYNNNNRTG 1 cut(s) 702
SacI GAGCTC 1 cut(s) 406
SaqAI TTAA 1 cut(s) 796
SatI GCNGC 2 cut(s) 237, 422
Sau3AI GATC 2 cut(s) 360, 766
Sau96I GGNCC 3 cut(s) 331, 516, 626
ScaI AGTACT 1 cut(s) 392
SchI GAGTC 1 cut(s) 10
ScrFI CCNGG 3 cut(s) 208, 292, 612
SduI GDGCHC 1 cut(s) 406
SfaNI GCATC 4 cut(s) 253, 408, 586, 682
SfcI CTRYAG 2 cut(s) 342, 386
SinI GGWCC 1 cut(s) 626
SmiMI CAYNNNNRTG 1 cut(s) 702
SmlI CTYRAG 2 cut(s) 493, 641
SmoI CTYRAG 2 cut(s) 493, 641
SpeI ACTAGT 1 cut(s) 250
SphI GCATGC 1 cut(s) 189
Sse9I AATT 4 cut(s) 364, 597, 687, 793
SsiI CCGC 2 cut(s) 106, 236
SspMI CTAG 4 cut(s) 146, 156, 251, 650
SstI GAGCTC 1 cut(s) 406
StyD4I CCNGG 3 cut(s) 206, 290, 610
StyI CCWWGG 1 cut(s) 759
TaaI ACNGT 3 cut(s) 286, 395, 553
TaiI ACGT 1 cut(s) 538
TaqI TCGA 1 cut(s) 94
TasI AATT 4 cut(s) 364, 597, 687, 793
TatI WGTACW 2 cut(s) 390, 545
TauI GCSGC 1 cut(s) 239
TfiI GAWTC 5 cut(s) 166, 302, 461, 667, 739
Tru1I TTAA 1 cut(s) 796
Tru9I TTAA 1 cut(s) 796
TscAI CASTG 1 cut(s) 264
TseI GCWGC 1 cut(s) 421
TspDTI ATGAA 1 cut(s) 722
TspGWI ACGGA 1 cut(s) 618
TspRI CASTG 1 cut(s) 264
Van91I CCANNNNNTGG 1 cut(s) 622
VpaK11BI GGWCC 1 cut(s) 626
XceI RCATGY 1 cut(s) 189
XcmI CCANNNNNNNNNTGG 1 cut(s) 435
XspI CTAG 4 cut(s) 146, 156, 251, 650
ZrmI AGTACT 1 cut(s) 392
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.