Rh4DG121400

FGGY carbohydrate kinase domain-containing

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4D
OG0002316
Physical Location & Seq
Forward (+)
19331830 .. 19339557
7728 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4DG121400.1

Sequence Viewer

Length: 1083 bp
ATGGACCATGGAGCTGTAGAACAAGCTGAAAGGATCAATTCACGCAACTCACCCGTCCTGCAGTACTGTGGTGGAGCTCTTTCCCCTGAGATGCAGCCTCCAAAGCTTTTATGGGTGAAAGAAAATCTGCCAGAATCTTGGTCAATGGTCTTCAGGTGGATGGACTTGAGTGATTGGTTATCATACAGGGCCACAGGAGATGATACACGTAGTCTCTGTACAACAGTTTGCAAATGGACATATCTTGGTCATCCACATATGCAGCAAAACAATGAGAAAGATTCTCGAGACATGGAAGCTTGTGGATGGGATGATGATTTCTGGGAGGAGATTGGATTAGGTGATCTTGTAGAAGGGCATCATGCTAAGATAGGACGAATTGCAGCCTTCCCTGGCCATCCTCTGGGTTCTGGTCTCACATCTACTGCTGCGAAAGCAAGATATTCTGAACTAGGTCTTTTAGCAGGGATTCCTGTTGGGACTTCGCTAATTGATGCTCATGCCGGTGGTGTGGGAGTATTGGAAAGTGTGCCTTCATCAGATTCTCAGCCTAAAGAGTCTGATGTTGAAGCTCTATGCCAACGTATGGTGTTAGTCTGTGGAACTTCTACTTGCCATCTGATTGTATCACAGAAGAAGCTTTTCATTCCAGGTGTCTGGGGTCTGTATTGGTCAGCTGTGGTACCTGAACAATGGCTCACAGAAGGTGGTCAGAGTGCTACGGGTGCATTATTGGATTACATAATTGAAAACCATGTTGCTTCTCCTCACCTTGCCAATCATGCTGCTTCTCAAAGCATTTATGTGTTTGAACTTCTGAACAAGATATTGGAAACAACGATGCATGAACTGAAGCGTCCGTTCCTTGCTTCTTTGACCGAAGATATTCATGTTCTTCCTGATTTTCATGGGAACAGGTCACCAATTGCAGATCCAAAAGCAAAAGGATTTATCTGTGGTTTAACACTTGATACAAGTGAGAAGCAATTGGCACTTCAATACCTTGCCACACTGCAAGGTACTTGGCACTTCAATACCTTGCCACACTGCAAGGTATTGCATATGGCACTCGCCATATTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FGGY_C FGGY_N

Protein Analysis

360

Amino Acids

39.63

Weight (kDa)

5.52

Isoelectric Point (pI)

47.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FGGY_C PF02782 197 - 341 6.6e-27 FGGY family of carbohydrate kinases, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 682
AccB1I GGYRCC 1 cut(s) 682
AccB7I CCANNNNNTGG 2 cut(s) 403, 586
AclWI GGATC 2 cut(s) 41, 926
AcoI YGGCCR 1 cut(s) 394
AcuI CTGAAG 2 cut(s) 136, 872
AfaI GTAC 4 cut(s) 65, 220, 684, 1021
AfiI CCNNNNNNNGG 2 cut(s) 403, 586
AflIII ACRYGT 1 cut(s) 206
AgsI TTSAA 5 cut(s) 569, 749, 812, 998, 1033
AjnI CCWGG 2 cut(s) 391, 649
AjuI GAANNNNNNNTTGG 2 cut(s) 812, 844
AluBI AGCT 8 cut(s) 14, 26, 77, 106, 299, 572, 640, 677
AluI AGCT 8 cut(s) 14, 26, 77, 106, 299, 572, 640, 677
Alw21I GWGCWC 1 cut(s) 79
Alw26I GTCTC 3 cut(s) 218, 282, 419
AlwI GGATC 2 cut(s) 41, 926
Ama87I CYCGRG 1 cut(s) 285
AoxI GGCC 2 cut(s) 189, 394
ApeKI GCWGC 5 cut(s) 94, 262, 383, 428, 785
Asp700I GAANNNNTTC 2 cut(s) 641, 885
Asp718I GGTACC 1 cut(s) 682
AspS9I GGNCC 2 cut(s) 4, 189
AsuHPI GGTGA 5 cut(s) 42, 127, 353, 761, 912
AvaI CYCGRG 1 cut(s) 285
AvaII GGWCC 1 cut(s) 4
BalI TGGCCA 1 cut(s) 396
BanI GGYRCC 1 cut(s) 682
BanII GRGCYC 1 cut(s) 79
BbsI GAAGAC 1 cut(s) 142
Bbv12I GWGCWC 1 cut(s) 79
BbvI GCAGC 5 cut(s) 106, 274, 395, 415, 772
BccI CCATC 4 cut(s) 154, 300, 405, 624
BciT130I CCWGG 2 cut(s) 393, 651
BcoDI GTCTC 3 cut(s) 218, 282, 419
BfaI CTAG 1 cut(s) 452
BfmI CTRYAG 2 cut(s) 15, 59
BisI GCNGC 5 cut(s) 95, 263, 384, 429, 786
BlsI GCNGC 5 cut(s) 96, 264, 385, 430, 787
BmcAI AGTACT 1 cut(s) 65
Bme1390I CCNGG 2 cut(s) 393, 651
Bme18I GGWCC 1 cut(s) 4
BmeT110I CYCGRG 1 cut(s) 285
BmgT120I GGNCC 2 cut(s) 4, 189
BmiI GGNNCC 1 cut(s) 684
BmrFI CCNGG 2 cut(s) 393, 651
BmsI GCATC 4 cut(s) 81, 367, 484, 831
BpiI GAAGAC 1 cut(s) 142
BpuEI CTTGAG 1 cut(s) 187
BsaAI YACGTR 1 cut(s) 209
BsaI GGTCTC 1 cut(s) 419
BsaJI CCNNGG 2 cut(s) 7, 391
Bsc4I CCNNNNNNNGG 2 cut(s) 403, 586
Bse118I RCCGGY 1 cut(s) 503
BseBI CCWGG 2 cut(s) 393, 651
BseDI CCNNGG 2 cut(s) 7, 391
BseGI GGATG 5 cut(s) 165, 250, 311, 316, 397
BseLI CCNNNNNNNGG 2 cut(s) 403, 586
BseMII CTCAG 2 cut(s) 78, 560
BseRI GAGGAG 2 cut(s) 341, 756
BseXI GCAGC 5 cut(s) 106, 274, 395, 415, 772
BshFI GGCC 2 cut(s) 191, 396
BshNI GGYRCC 1 cut(s) 682
BsiHKAI GWGCWC 1 cut(s) 79
BsiHKCI CYCGRG 1 cut(s) 285
BsiSI CCGG 1 cut(s) 504
BslFI GGGAC 1 cut(s) 493
BslI CCNNNNNNNGG 2 cut(s) 403, 586
BsmAI GTCTC 3 cut(s) 218, 282, 419
BsmFI GGGAC 1 cut(s) 493
BsnI GGCC 2 cut(s) 191, 396
Bso31I GGTCTC 1 cut(s) 419
BsoBI CYCGRG 1 cut(s) 285
Bsp1286I GDGCHC 1 cut(s) 79
Bsp1407I TGTACA 1 cut(s) 218
Bsp143I GATC 3 cut(s) 33, 343, 931
Bsp19I CCATGG 1 cut(s) 7
BspANI GGCC 2 cut(s) 191, 396
BspCNI CTCAG 2 cut(s) 79, 559
BspLI GGNNCC 1 cut(s) 684
BspMAI CTGCAG 1 cut(s) 63
BspPI GGATC 2 cut(s) 41, 926
BspT107I GGYRCC 1 cut(s) 682
BspTNI GGTCTC 1 cut(s) 419
BsrFI RCCGGY 1 cut(s) 503
BsrGI TGTACA 1 cut(s) 218
BssAI RCCGGY 1 cut(s) 503
BssECI CCNNGG 2 cut(s) 7, 391
BssMI GATC 3 cut(s) 33, 343, 931
BssT1I CCWWGG 1 cut(s) 7
Bst2UI CCWGG 2 cut(s) 393, 651
Bst4CI ACNGT 2 cut(s) 68, 226
BstAUI TGTACA 1 cut(s) 218
BstBAI YACGTR 1 cut(s) 209
BstDEI CTNAG 3 cut(s) 87, 366, 546
BstDSI CCRYGG 1 cut(s) 7
BstEII GGTNACC 1 cut(s) 918
BstF5I GGATG 5 cut(s) 165, 250, 311, 316, 397
BstKTI GATC 3 cut(s) 36, 346, 934
BstMAI GTCTC 3 cut(s) 218, 282, 419
BstMBI GATC 3 cut(s) 33, 343, 931
BstMWI GCNNNNNNNGC 4 cut(s) 103, 434, 725, 782
BstNI CCWGG 2 cut(s) 393, 651
BstPI GGTNACC 1 cut(s) 918
BstSCI CCNGG 2 cut(s) 391, 649
BstSFI CTRYAG 2 cut(s) 15, 59
BstV1I GCAGC 5 cut(s) 106, 274, 395, 415, 772
BstV2I GAAGAC 1 cut(s) 142
BstX2I RGATCY 1 cut(s) 931
BstXI CCANNNNNNTGG 2 cut(s) 138, 657
BstYI RGATCY 1 cut(s) 931
BsuRI GGCC 2 cut(s) 191, 396
BtgI CCRYGG 1 cut(s) 7
BtsCI GGATG 5 cut(s) 165, 250, 311, 316, 397
BtsI GCAGTG 2 cut(s) 1010, 1045
BtsIMutI CAGTG 2 cut(s) 1010, 1045
Cfr10I RCCGGY 1 cut(s) 503
Cfr13I GGNCC 2 cut(s) 4, 189
CseI GACGC 1 cut(s) 845
Csp6I GTAC 4 cut(s) 64, 219, 683, 1020
CviAII CATG 9 cut(s) 8, 292, 362, 500, 755, 782, 845, 890, 908
CviQI GTAC 4 cut(s) 64, 219, 683, 1020
DdeI CTNAG 3 cut(s) 87, 366, 546
DpnI GATC 3 cut(s) 35, 345, 933
DpnII GATC 3 cut(s) 33, 343, 931
EaeI YGGCCR 1 cut(s) 394
Ecl136II GAGCTC 1 cut(s) 77
Eco130I CCWWGG 1 cut(s) 7
Eco24I GRGCYC 1 cut(s) 79
Eco31I GGTCTC 1 cut(s) 419
Eco47I GGWCC 1 cut(s) 4
Eco53kI GAGCTC 1 cut(s) 77
Eco57I CTGAAG 2 cut(s) 136, 872
Eco88I CYCGRG 1 cut(s) 285
Eco91I GGTNACC 1 cut(s) 918
EcoICRI GAGCTC 1 cut(s) 77
EcoO65I GGTNACC 1 cut(s) 918
EcoRII CCWGG 2 cut(s) 391, 649
EcoT14I CCWWGG 1 cut(s) 7
EcoT22I ATGCAT 1 cut(s) 846
EcoT38I GRGCYC 1 cut(s) 79
ErhI CCWWGG 1 cut(s) 7
FaeI CATG 9 cut(s) 11, 295, 365, 503, 758, 785, 848, 893, 911
FalI AAGNNNNNCTT 2 cut(s) 517, 549
FaqI GGGAC 1 cut(s) 493
FatI CATG 9 cut(s) 7, 291, 361, 499, 754, 781, 844, 889, 907
FauNDI CATATG 2 cut(s) 258, 1062
Fnu4HI GCNGC 5 cut(s) 95, 263, 384, 429, 786
FokI GGATG 5 cut(s) 172, 237, 318, 323, 384
FriOI GRGCYC 1 cut(s) 79
Fsp4HI GCNGC 5 cut(s) 95, 263, 384, 429, 786
FspBI CTAG 1 cut(s) 452
GluI GCNGC 5 cut(s) 95, 263, 384, 429, 786
HaeIII GGCC 2 cut(s) 191, 396
HapII CCGG 1 cut(s) 504
HgaI GACGC 1 cut(s) 845
Hin1II CATG 9 cut(s) 11, 295, 365, 503, 758, 785, 848, 893, 911
HindIII AAGCTT 3 cut(s) 104, 297, 638
HinfI GANTC 5 cut(s) 134, 281, 469, 542, 557
HpaII CCGG 1 cut(s) 504
HphI GGTGA 5 cut(s) 42, 127, 353, 761, 912
Hpy188I TCNGA 6 cut(s) 448, 541, 562, 621, 714, 819
Hpy188III TCNNGA 3 cut(s) 285, 287, 899
HpyAV CCTTC 4 cut(s) 347, 397, 543, 698
HpyCH4III ACNGT 2 cut(s) 68, 226
HpyCH4IV ACGT 2 cut(s) 208, 583
HpyF10VI GCNNNNNNNGC 4 cut(s) 103, 434, 725, 782
HpyF3I CTNAG 3 cut(s) 87, 366, 546
HpySE526I ACGT 2 cut(s) 208, 583
Hsp92II CATG 9 cut(s) 11, 295, 365, 503, 758, 785, 848, 893, 911
KpnI GGTACC 1 cut(s) 686
Kzo9I GATC 3 cut(s) 33, 343, 931
LmnI GCTCC 2 cut(s) 11, 74
Lsp1109I GCAGC 5 cut(s) 106, 274, 395, 415, 772
LweI GCATC 4 cut(s) 81, 367, 484, 831
MaeI CTAG 1 cut(s) 452
MaeII ACGT 2 cut(s) 208, 583
MaeIII GTNAC 1 cut(s) 918
MalI GATC 3 cut(s) 35, 345, 933
MboI GATC 3 cut(s) 33, 343, 931
MboII GAAGA 4 cut(s) 142, 646, 887, 893
MfeI CAATTG 2 cut(s) 924, 986
MflI RGATCY 1 cut(s) 931
MhlI GDGCHC 1 cut(s) 79
MlsI TGGCCA 1 cut(s) 396
MluCI AATT 6 cut(s) 37, 378, 489, 744, 924, 986
MluNI TGGCCA 1 cut(s) 396
MlyI GAGTC 1 cut(s) 566
MnlI CCTC 4 cut(s) 108, 319, 411, 777
Mox20I TGGCCA 1 cut(s) 396
Mph1103I ATGCAT 1 cut(s) 846
MroXI GAANNNNTTC 2 cut(s) 641, 885
MscI TGGCCA 1 cut(s) 396
MseI TTAA 1 cut(s) 962
MslI CAYNNNNRTG 2 cut(s) 504, 803
Msp20I TGGCCA 1 cut(s) 396
MspA1I CMGCKG 1 cut(s) 677
MspI CCGG 1 cut(s) 504
MspR9I CCNGG 2 cut(s) 393, 651
MunI CAATTG 2 cut(s) 924, 986
MvaI CCWGG 2 cut(s) 393, 651
MwoI GCNNNNNNNGC 4 cut(s) 103, 434, 725, 782
NcoI CCATGG 1 cut(s) 7
NdeI CATATG 2 cut(s) 258, 1062
NdeII GATC 3 cut(s) 33, 343, 931
NlaIII CATG 9 cut(s) 11, 295, 365, 503, 758, 785, 848, 893, 911
NlaIV GGNNCC 1 cut(s) 684
NmuCI GTSAC 1 cut(s) 918
NsiI ATGCAT 1 cut(s) 846
PaeR7I CTCGAG 1 cut(s) 285
PdmI GAANNNNTTC 2 cut(s) 641, 885
PfeI GAWTC 4 cut(s) 134, 281, 469, 542
PflMI CCANNNNNTGG 2 cut(s) 403, 586
PkrI GCNGC 5 cut(s) 96, 264, 385, 430, 787
PleI GAGTC 1 cut(s) 565
PpsI GAGTC 1 cut(s) 565
Ppu21I YACGTR 1 cut(s) 209
Psp124BI GAGCTC 1 cut(s) 79
Psp6I CCWGG 2 cut(s) 391, 649
PspEI GGTNACC 1 cut(s) 918
PspGI CCWGG 2 cut(s) 391, 649
PspN4I GGNNCC 1 cut(s) 684
PspPI GGNCC 2 cut(s) 4, 189
PstI CTGCAG 1 cut(s) 63
PsuI RGATCY 1 cut(s) 931
PvuII CAGCTG 1 cut(s) 677
RsaI GTAC 4 cut(s) 65, 220, 684, 1021
RsaNI GTAC 4 cut(s) 64, 219, 683, 1020
RseI CAYNNNNRTG 2 cut(s) 504, 803
SacI GAGCTC 1 cut(s) 79
SaqAI TTAA 1 cut(s) 962
SatI GCNGC 5 cut(s) 95, 263, 384, 429, 786
Sau3AI GATC 3 cut(s) 33, 343, 931
Sau96I GGNCC 2 cut(s) 4, 189
ScaI AGTACT 1 cut(s) 65
SchI GAGTC 1 cut(s) 566
ScrFI CCNGG 2 cut(s) 393, 651
SduI GDGCHC 1 cut(s) 79
SfaNI GCATC 4 cut(s) 81, 367, 484, 831
SfcI CTRYAG 2 cut(s) 15, 59
Sfr274I CTCGAG 1 cut(s) 285
SinI GGWCC 1 cut(s) 4
SlaI CTCGAG 1 cut(s) 285
SmiMI CAYNNNNRTG 2 cut(s) 504, 803
SmlI CTYRAG 2 cut(s) 166, 285
SmoI CTYRAG 2 cut(s) 166, 285
Sse9I AATT 6 cut(s) 37, 378, 489, 744, 924, 986
SspMI CTAG 1 cut(s) 452
SstI GAGCTC 1 cut(s) 79
StyD4I CCNGG 2 cut(s) 391, 649
StyI CCWWGG 1 cut(s) 7
TaaI ACNGT 2 cut(s) 68, 226
TaiI ACGT 2 cut(s) 211, 586
TaqI TCGA 1 cut(s) 286
TaqII GACCGA 1 cut(s) 893
TasI AATT 6 cut(s) 37, 378, 489, 744, 924, 986
TatI WGTACW 2 cut(s) 63, 218
TfiI GAWTC 4 cut(s) 134, 281, 469, 542
Tru1I TTAA 1 cut(s) 962
Tru9I TTAA 1 cut(s) 962
TscAI CASTG 2 cut(s) 1017, 1052
TseFI GTSAC 1 cut(s) 918
TseI GCWGC 5 cut(s) 94, 262, 383, 428, 785
Tsp45I GTSAC 1 cut(s) 918
TspDTI ATGAA 5 cut(s) 525, 634, 861, 878, 896
TspGWI ACGGA 1 cut(s) 849
TspRI CASTG 2 cut(s) 1017, 1052
Van91I CCANNNNNTGG 2 cut(s) 403, 586
VpaK11BI GGWCC 1 cut(s) 4
XcmI CCANNNNNNNNNTGG 1 cut(s) 108
XhoI CTCGAG 1 cut(s) 285
XmnI GAANNNNTTC 2 cut(s) 641, 885
XspI CTAG 1 cut(s) 452
ZrmI AGTACT 1 cut(s) 65
Zsp2I ATGCAT 1 cut(s) 846
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.