Transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G30935 |
| fragaria_vesca | FvH4_1g00960 FvH4_1g00960 |
| malus_domestica | MD02G1007900.v1.1 MD15G1152100.v1.1 |
| prunus_persica | Prupe.7G262600_v2.0.a1 |
| pyrus_communis | pycom02g00680 pycom02g00690 pycom15g13670 |
| rosa_chinensis | RchiOBHm_Chr2g0085691 |
| rosa_laevigata | RLG00000015712 |
| rosa_multiflora | Rmu_sc0007631.1_g000005 |
| rosa_roxburghii | Rroxscaffold_2G00155120 |
| rosa_rugosa | Rorug01G0462300 Rorug01G0462400 Rorug01G0462500 Rorug01G0462600 |
| rosa_samantha | Rh2AG011500 Rh2BG012000 Rh2CG012800 Rh2DG013900 |
| rosa_wichuraiana | Rw2G001020 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 513 |
| Acc36I | ACCTGC | 1 cut(s) | 529 |
| AccB1I | GGYRCC | 1 cut(s) | 1171 |
| AccBSI | CCGCTC | 1 cut(s) | 1223 |
| AciI | CCGC | 5 cut(s) | 119, 396, 780, 1076, 1221 |
| AclWI | GGATC | 4 cut(s) | 177, 371, 384, 782 |
| AcsI | RAATTY | 2 cut(s) | 193, 953 |
| AcuI | CTGAAG | 1 cut(s) | 1056 |
| AcyI | GRCGYC | 1 cut(s) | 359 |
| AdeI | CACNNNGTG | 1 cut(s) | 116 |
| AfaI | GTAC | 3 cut(s) | 580, 963, 1152 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 166, 1285 |
| AgsI | TTSAA | 5 cut(s) | 179, 218, 393, 611, 1275 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 363 |
| AjnI | CCWGG | 2 cut(s) | 937, 1241 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 96, 128 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1071, 1103 |
| AluBI | AGCT | 9 cut(s) | 29, 690, 722, 763, 866, 971, 1200, 1214, 1358 |
| AluI | AGCT | 9 cut(s) | 29, 690, 722, 763, 866, 971, 1200, 1214, 1358 |
| Alw21I | GWGCWC | 1 cut(s) | 1286 |
| Alw26I | GTCTC | 5 cut(s) | 90, 137, 233, 934, 1097 |
| AlwI | GGATC | 4 cut(s) | 177, 371, 384, 782 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 926 |
| Ama87I | CYCGRG | 1 cut(s) | 697 |
| AoxI | GGCC | 1 cut(s) | 728 |
| ApeKI | GCWGC | 4 cut(s) | 332, 968, 1214, 1217 |
| ApoI | RAATTY | 2 cut(s) | 193, 953 |
| AspA2I | CCTAGG | 2 cut(s) | 160, 488 |
| AspS9I | GGNCC | 1 cut(s) | 1190 |
| AsuC2I | CCSGG | 1 cut(s) | 679 |
| AsuHPI | GGTGA | 4 cut(s) | 986, 1004, 1042, 1270 |
| AsuII | TTCGAA | 1 cut(s) | 1383 |
| AvaI | CYCGRG | 1 cut(s) | 697 |
| AvaII | GGWCC | 1 cut(s) | 1190 |
| AvrII | CCTAGG | 2 cut(s) | 160, 488 |
| BaeI | ACNNNNGTAYC | 3 cut(s) | 34, 738, 771 |
| BamHI | GGATCC | 1 cut(s) | 376 |
| BanI | GGYRCC | 1 cut(s) | 1171 |
| BanII | GRGCYC | 1 cut(s) | 560 |
| BauI | CACGAG | 1 cut(s) | 501 |
| BbsI | GAAGAC | 3 cut(s) | 15, 689, 898 |
| Bbv12I | GWGCWC | 1 cut(s) | 1286 |
| BbvI | GCAGC | 4 cut(s) | 319, 980, 1201, 1229 |
| BccI | CCATC | 3 cut(s) | 500, 989, 1342 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1363, 1397 |
| BciT130I | CCWGG | 2 cut(s) | 939, 1243 |
| BciVI | GTATCC | 1 cut(s) | 992 |
| BcnI | CCSGG | 1 cut(s) | 679 |
| BcoDI | GTCTC | 5 cut(s) | 90, 137, 233, 934, 1097 |
| BfaI | CTAG | 5 cut(s) | 161, 489, 687, 777, 1359 |
| BfmI | CTRYAG | 2 cut(s) | 571, 1215 |
| BfuAI | ACCTGC | 1 cut(s) | 529 |
| BfuI | GTATCC | 1 cut(s) | 992 |
| BisI | GCNGC | 5 cut(s) | 333, 969, 1215, 1218, 1221 |
| BlnI | CCTAGG | 2 cut(s) | 160, 488 |
| BlsI | GCNGC | 5 cut(s) | 334, 970, 1216, 1219, 1222 |
| Bme1390I | CCNGG | 3 cut(s) | 679, 939, 1243 |
| Bme18I | GGWCC | 1 cut(s) | 1190 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 363 |
| BmeT110I | CYCGRG | 1 cut(s) | 697 |
| BmgT120I | GGNCC | 1 cut(s) | 1190 |
| BmiI | GGNNCC | 5 cut(s) | 66, 207, 378, 876, 1173 |
| BmrFI | CCNGG | 3 cut(s) | 679, 939, 1243 |
| BmsI | GCATC | 2 cut(s) | 344, 1055 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1109 |
| BpiI | GAAGAC | 3 cut(s) | 15, 689, 898 |
| Bpu14I | TTCGAA | 1 cut(s) | 1383 |
| BpuMI | CCSGG | 1 cut(s) | 679 |
| BsaHI | GRCGYC | 1 cut(s) | 359 |
| BsaJI | CCNNGG | 6 cut(s) | 160, 488, 552, 677, 1049, 1186 |
| BsaWI | WCCGGW | 1 cut(s) | 840 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1329, 1359 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 166, 1285 |
| Bse118I | RCCGGY | 4 cut(s) | 280, 454, 496, 1168 |
| Bse1I | ACTGG | 4 cut(s) | 19, 417, 1085, 1279 |
| Bse3DI | GCAATG | 2 cut(s) | 637, 1400 |
| BseBI | CCWGG | 2 cut(s) | 939, 1243 |
| BseDI | CCNNGG | 6 cut(s) | 160, 488, 552, 677, 1049, 1186 |
| BseGI | GGATG | 3 cut(s) | 748, 1045, 1085 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 166, 1285 |
| BseMI | GCAATG | 2 cut(s) | 637, 1400 |
| BseMII | CTCAG | 1 cut(s) | 74 |
| BseNI | ACTGG | 4 cut(s) | 19, 417, 1085, 1279 |
| BseXI | GCAGC | 4 cut(s) | 319, 980, 1201, 1229 |
| BshFI | GGCC | 1 cut(s) | 730 |
| BshNI | GGYRCC | 1 cut(s) | 1171 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1286 |
| BsiHKCI | CYCGRG | 1 cut(s) | 697 |
| BsiSI | CCGG | 8 cut(s) | 68, 281, 455, 497, 679, 727, 841, 1169 |
| BslFI | GGGAC | 1 cut(s) | 534 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 166, 1285 |
| BsmAI | GTCTC | 5 cut(s) | 90, 137, 233, 934, 1097 |
| BsmBI | CGTCTC | 1 cut(s) | 90 |
| BsmFI | GGGAC | 1 cut(s) | 534 |
| BsmI | GAATGC | 1 cut(s) | 617 |
| BsnI | GGCC | 1 cut(s) | 730 |
| BsoBI | CYCGRG | 1 cut(s) | 697 |
| Bsp119I | TTCGAA | 1 cut(s) | 1383 |
| Bsp1286I | GDGCHC | 2 cut(s) | 560, 1286 |
| Bsp1407I | TGTACA | 1 cut(s) | 578 |
| Bsp143I | GATC | 5 cut(s) | 169, 376, 443, 787, 1252 |
| Bsp19I | CCATGG | 1 cut(s) | 1186 |
| BspACI | CCGC | 5 cut(s) | 119, 396, 780, 1076, 1221 |
| BspANI | GGCC | 1 cut(s) | 730 |
| BspCNI | CTCAG | 1 cut(s) | 75 |
| BspHI | TCATGA | 1 cut(s) | 667 |
| BspLI | GGNNCC | 5 cut(s) | 66, 207, 378, 876, 1173 |
| BspMAI | CTGCAG | 1 cut(s) | 1219 |
| BspMI | ACCTGC | 1 cut(s) | 529 |
| BspPI | GGATC | 4 cut(s) | 177, 371, 384, 782 |
| BspQI | GCTCTTC | 2 cut(s) | 44, 753 |
| BspT104I | TTCGAA | 1 cut(s) | 1383 |
| BspT107I | GGYRCC | 1 cut(s) | 1171 |
| BsrBI | CCGCTC | 1 cut(s) | 1223 |
| BsrDI | GCAATG | 2 cut(s) | 637, 1400 |
| BsrFI | RCCGGY | 4 cut(s) | 280, 454, 496, 1168 |
| BsrGI | TGTACA | 1 cut(s) | 578 |
| BsrI | ACTGG | 4 cut(s) | 19, 417, 1085, 1279 |
| BssAI | RCCGGY | 4 cut(s) | 280, 454, 496, 1168 |
| BssECI | CCNNGG | 6 cut(s) | 160, 488, 552, 677, 1049, 1186 |
| BssMI | GATC | 5 cut(s) | 169, 376, 443, 787, 1252 |
| BssNI | GRCGYC | 1 cut(s) | 359 |
| BssSI | CACGAG | 1 cut(s) | 501 |
| BssT1I | CCWWGG | 5 cut(s) | 160, 488, 552, 1049, 1186 |
| Bst2BI | CACGAG | 1 cut(s) | 501 |
| Bst2UI | CCWGG | 2 cut(s) | 939, 1243 |
| Bst4CI | ACNGT | 6 cut(s) | 43, 148, 262, 355, 751, 854 |
| Bst6I | CTCTTC | 3 cut(s) | 44, 291, 753 |
| BstACI | GRCGYC | 1 cut(s) | 359 |
| BstAUI | TGTACA | 1 cut(s) | 578 |
| BstBI | TTCGAA | 1 cut(s) | 1383 |
| BstDEI | CTNAG | 3 cut(s) | 30, 83, 1176 |
| BstDSI | CCRYGG | 1 cut(s) | 1186 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 164 |
| BstF5I | GGATG | 3 cut(s) | 748, 1045, 1085 |
| BstKTI | GATC | 5 cut(s) | 172, 379, 446, 790, 1255 |
| BstMAI | GTCTC | 5 cut(s) | 90, 137, 233, 934, 1097 |
| BstMBI | GATC | 5 cut(s) | 169, 376, 443, 787, 1252 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 395, 1220 |
| BstNI | CCWGG | 2 cut(s) | 939, 1243 |
| BstNSI | RCATGY | 1 cut(s) | 1168 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1109 |
| BstSCI | CCNGG | 3 cut(s) | 677, 937, 1241 |
| BstSFI | CTRYAG | 2 cut(s) | 571, 1215 |
| BstV1I | GCAGC | 4 cut(s) | 319, 980, 1201, 1229 |
| BstV2I | GAAGAC | 3 cut(s) | 15, 689, 898 |
| BstX2I | RGATCY | 2 cut(s) | 376, 787 |
| BstYI | RGATCY | 2 cut(s) | 376, 787 |
| BsuI | GTATCC | 1 cut(s) | 992 |
| BsuRI | GGCC | 1 cut(s) | 730 |
| BtgI | CCRYGG | 1 cut(s) | 1186 |
| BtsCI | GGATG | 3 cut(s) | 748, 1045, 1085 |
| BtsIMutI | CAGTG | 6 cut(s) | 12, 360, 410, 585, 850, 1286 |
| BveI | ACCTGC | 1 cut(s) | 529 |
| CaiI | CAGNNNCTG | 1 cut(s) | 926 |
| CciI | TCATGA | 1 cut(s) | 667 |
| Cfr10I | RCCGGY | 4 cut(s) | 280, 454, 496, 1168 |
| Cfr13I | GGNCC | 1 cut(s) | 1190 |
| CseI | GACGC | 2 cut(s) | 238, 367 |
| Csp6I | GTAC | 3 cut(s) | 579, 962, 1151 |
| CviAII | CATG | 5 cut(s) | 137, 363, 668, 1165, 1187 |
| CviQI | GTAC | 3 cut(s) | 579, 962, 1151 |
| DdeI | CTNAG | 3 cut(s) | 30, 83, 1176 |
| DpnI | GATC | 5 cut(s) | 171, 378, 445, 789, 1254 |
| DpnII | GATC | 5 cut(s) | 169, 376, 443, 787, 1252 |
| DraIII | CACNNNGTG | 1 cut(s) | 116 |
| DriI | GACNNNNNGTC | 1 cut(s) | 363 |
| Eam1104I | CTCTTC | 3 cut(s) | 44, 291, 753 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 363 |
| EarI | CTCTTC | 3 cut(s) | 44, 291, 753 |
| Eco130I | CCWWGG | 5 cut(s) | 160, 488, 552, 1049, 1186 |
| Eco24I | GRGCYC | 1 cut(s) | 560 |
| Eco47I | GGWCC | 1 cut(s) | 1190 |
| Eco57I | CTGAAG | 1 cut(s) | 1056 |
| Eco88I | CYCGRG | 1 cut(s) | 697 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 164 |
| EcoRII | CCWGG | 2 cut(s) | 937, 1241 |
| EcoT14I | CCWWGG | 5 cut(s) | 160, 488, 552, 1049, 1186 |
| EcoT38I | GRGCYC | 1 cut(s) | 560 |
| ErhI | CCWWGG | 5 cut(s) | 160, 488, 552, 1049, 1186 |
| Esp3I | CGTCTC | 1 cut(s) | 90 |
| FaeI | CATG | 5 cut(s) | 140, 366, 671, 1168, 1190 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 674, 706 |
| FaqI | GGGAC | 1 cut(s) | 534 |
| FatI | CATG | 5 cut(s) | 136, 362, 667, 1164, 1186 |
| FauI | CCCGC | 1 cut(s) | 1069 |
| Fnu4HI | GCNGC | 5 cut(s) | 333, 969, 1215, 1218, 1221 |
| FokI | GGATG | 3 cut(s) | 755, 1032, 1092 |
| FriOI | GRGCYC | 1 cut(s) | 560 |
| Fsp4HI | GCNGC | 5 cut(s) | 333, 969, 1215, 1218, 1221 |
| FspBI | CTAG | 5 cut(s) | 161, 489, 687, 777, 1359 |
| GluI | GCNGC | 5 cut(s) | 333, 969, 1215, 1218, 1221 |
| HaeIII | GGCC | 1 cut(s) | 730 |
| HapII | CCGG | 8 cut(s) | 68, 281, 455, 497, 679, 727, 841, 1169 |
| HgaI | GACGC | 2 cut(s) | 238, 367 |
| Hin1I | GRCGYC | 1 cut(s) | 359 |
| Hin1II | CATG | 5 cut(s) | 140, 366, 671, 1168, 1190 |
| HincII | GTYRAC | 3 cut(s) | 463, 649, 838 |
| HindII | GTYRAC | 3 cut(s) | 463, 649, 838 |
| HpaI | GTTAAC | 2 cut(s) | 463, 649 |
| HpaII | CCGG | 8 cut(s) | 68, 281, 455, 497, 679, 727, 841, 1169 |
| HphI | GGTGA | 4 cut(s) | 986, 1004, 1042, 1270 |
| Hpy166II | GTNNAC | 9 cut(s) | 463, 579, 649, 659, 838, 964, 1094, 1153, 1261 |
| Hpy188I | TCNGA | 7 cut(s) | 95, 343, 448, 739, 787, 922, 1269 |
| Hpy188III | TCNNGA | 4 cut(s) | 188, 503, 668, 1114 |
| Hpy8I | GTNNAC | 9 cut(s) | 463, 579, 649, 659, 838, 964, 1094, 1153, 1261 |
| Hpy99I | CGWCG | 1 cut(s) | 26 |
| HpyAV | CCTTC | 2 cut(s) | 67, 333 |
| HpyCH4III | ACNGT | 6 cut(s) | 43, 148, 262, 355, 751, 854 |
| HpyCH4IV | ACGT | 1 cut(s) | 1329 |
| HpyCH4V | TGCA | 4 cut(s) | 335, 383, 1068, 1217 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 395, 1220 |
| HpyF3I | CTNAG | 3 cut(s) | 30, 83, 1176 |
| HpySE526I | ACGT | 1 cut(s) | 1329 |
| Hsp92I | GRCGYC | 1 cut(s) | 359 |
| Hsp92II | CATG | 5 cut(s) | 140, 366, 671, 1168, 1190 |
| KspAI | GTTAAC | 2 cut(s) | 463, 649 |
| Kzo9I | GATC | 5 cut(s) | 169, 376, 443, 787, 1252 |
| LguI | GCTCTTC | 2 cut(s) | 44, 753 |
| LmnI | GCTCC | 3 cut(s) | 64, 620, 1228 |
| Lsp1109I | GCAGC | 4 cut(s) | 319, 980, 1201, 1229 |
| LweI | GCATC | 2 cut(s) | 344, 1055 |
| MaeI | CTAG | 5 cut(s) | 161, 489, 687, 777, 1359 |
| MaeII | ACGT | 1 cut(s) | 1329 |
| MaeIII | GTNAC | 4 cut(s) | 355, 475, 566, 712 |
| MalI | GATC | 5 cut(s) | 171, 378, 445, 789, 1254 |
| MbiI | CCGCTC | 1 cut(s) | 1223 |
| MboI | GATC | 5 cut(s) | 169, 376, 443, 787, 1252 |
| MboII | GAAGA | 9 cut(s) | 17, 20, 61, 140, 230, 308, 694, 770, 903 |
| MfeI | CAATTG | 1 cut(s) | 768 |
| MflI | RGATCY | 2 cut(s) | 376, 787 |
| MhlI | GDGCHC | 2 cut(s) | 560, 1286 |
| MluCI | AATT | 6 cut(s) | 89, 193, 514, 606, 768, 953 |
| MlyI | GAGTC | 4 cut(s) | 94, 338, 556, 830 |
| MmeI | TCCRAC | 3 cut(s) | 449, 1250, 1292 |
| MnlI | CCTC | 7 cut(s) | 94, 208, 684, 733, 865, 1053, 1203 |
| MseI | TTAA | 3 cut(s) | 462, 543, 648 |
| MslI | CAYNNNNRTG | 2 cut(s) | 666, 1169 |
| MspA1I | CMGCKG | 2 cut(s) | 971, 1076 |
| MspI | CCGG | 8 cut(s) | 68, 281, 455, 497, 679, 727, 841, 1169 |
| MspR9I | CCNGG | 3 cut(s) | 679, 939, 1243 |
| MunI | CAATTG | 1 cut(s) | 768 |
| Mva1269I | GAATGC | 1 cut(s) | 617 |
| MvaI | CCWGG | 2 cut(s) | 939, 1243 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 395, 1220 |
| NciI | CCSGG | 1 cut(s) | 679 |
| NcoI | CCATGG | 1 cut(s) | 1186 |
| NdeII | GATC | 5 cut(s) | 169, 376, 443, 787, 1252 |
| NlaIII | CATG | 5 cut(s) | 140, 366, 671, 1168, 1190 |
| NlaIV | GGNNCC | 5 cut(s) | 66, 207, 378, 876, 1173 |
| NmuCI | GTSAC | 1 cut(s) | 355 |
| NspI | RCATGY | 1 cut(s) | 1168 |
| NspV | TTCGAA | 1 cut(s) | 1383 |
| PagI | TCATGA | 1 cut(s) | 667 |
| PciSI | GCTCTTC | 2 cut(s) | 44, 753 |
| PctI | GAATGC | 1 cut(s) | 617 |
| PfeI | GAWTC | 6 cut(s) | 301, 449, 623, 923, 1352, 1380 |
| PflFI | GACNNNGTC | 1 cut(s) | 84 |
| PkrI | GCNGC | 5 cut(s) | 334, 970, 1216, 1219, 1222 |
| PleI | GAGTC | 4 cut(s) | 93, 338, 555, 829 |
| PpsI | GAGTC | 4 cut(s) | 93, 338, 555, 829 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1109 |
| PsiI | TTATAA | 1 cut(s) | 513 |
| Psp6I | CCWGG | 2 cut(s) | 937, 1241 |
| PspGI | CCWGG | 2 cut(s) | 937, 1241 |
| PspN4I | GGNNCC | 5 cut(s) | 66, 207, 378, 876, 1173 |
| PspPI | GGNCC | 1 cut(s) | 1190 |
| PstI | CTGCAG | 1 cut(s) | 1219 |
| PstNI | CAGNNNCTG | 1 cut(s) | 926 |
| PsuI | RGATCY | 2 cut(s) | 376, 787 |
| PsyI | GACNNNGTC | 1 cut(s) | 84 |
| PvuII | CAGCTG | 1 cut(s) | 971 |
| RsaI | GTAC | 3 cut(s) | 580, 963, 1152 |
| RsaNI | GTAC | 3 cut(s) | 579, 962, 1151 |
| RseI | CAYNNNNRTG | 2 cut(s) | 666, 1169 |
| SapI | GCTCTTC | 2 cut(s) | 44, 753 |
| SaqAI | TTAA | 3 cut(s) | 462, 543, 648 |
| SatI | GCNGC | 5 cut(s) | 333, 969, 1215, 1218, 1221 |
| Sau3AI | GATC | 5 cut(s) | 169, 376, 443, 787, 1252 |
| Sau96I | GGNCC | 1 cut(s) | 1190 |
| SchI | GAGTC | 4 cut(s) | 94, 338, 556, 830 |
| ScrFI | CCNGG | 3 cut(s) | 679, 939, 1243 |
| SduI | GDGCHC | 2 cut(s) | 560, 1286 |
| SfaNI | GCATC | 2 cut(s) | 344, 1055 |
| SfcI | CTRYAG | 2 cut(s) | 571, 1215 |
| SfuI | TTCGAA | 1 cut(s) | 1383 |
| SgrAI | CRCCGGYG | 1 cut(s) | 454 |
| SinI | GGWCC | 1 cut(s) | 1190 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 666, 1169 |
| Sse9I | AATT | 6 cut(s) | 89, 193, 514, 606, 768, 953 |
| SsiI | CCGC | 5 cut(s) | 119, 396, 780, 1076, 1221 |
| SspMI | CTAG | 5 cut(s) | 161, 489, 687, 777, 1359 |
| StyD4I | CCNGG | 3 cut(s) | 677, 937, 1241 |
| StyI | CCWWGG | 5 cut(s) | 160, 488, 552, 1049, 1186 |
| TaaI | ACNGT | 6 cut(s) | 43, 148, 262, 355, 751, 854 |
| TaiI | ACGT | 1 cut(s) | 1332 |
| TaqI | TCGA | 4 cut(s) | 21, 187, 1113, 1383 |
| TasI | AATT | 6 cut(s) | 89, 193, 514, 606, 768, 953 |
| TatI | WGTACW | 3 cut(s) | 578, 961, 1150 |
| TauI | GCSGC | 1 cut(s) | 1223 |
| TfiI | GAWTC | 6 cut(s) | 301, 449, 623, 923, 1352, 1380 |
| Tru1I | TTAA | 3 cut(s) | 462, 543, 648 |
| Tru9I | TTAA | 3 cut(s) | 462, 543, 648 |
| TscAI | CASTG | 6 cut(s) | 19, 360, 417, 592, 857, 1286 |
| TseFI | GTSAC | 1 cut(s) | 355 |
| TseI | GCWGC | 4 cut(s) | 332, 968, 1214, 1217 |
| Tsp45I | GTSAC | 1 cut(s) | 355 |
| TspDTI | ATGAA | 2 cut(s) | 303, 684 |
| TspGWI | ACGGA | 3 cut(s) | 93, 577, 780 |
| TspRI | CASTG | 6 cut(s) | 19, 360, 417, 592, 857, 1286 |
| Tth111I | GACNNNGTC | 1 cut(s) | 84 |
| VpaK11BI | GGWCC | 1 cut(s) | 1190 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 164 |
| XapI | RAATTY | 2 cut(s) | 193, 953 |
| XceI | RCATGY | 1 cut(s) | 1168 |
| XmaJI | CCTAGG | 2 cut(s) | 160, 488 |
| XspI | CTAG | 5 cut(s) | 161, 489, 687, 777, 1359 |