WRKY transcription factor
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G30935 |
| fragaria_vesca | FvH4_1g00960 FvH4_1g00960 |
| malus_domestica | MD02G1007900.v1.1 MD15G1152100.v1.1 |
| prunus_persica | Prupe.7G262600_v2.0.a1 |
| pyrus_communis | pycom02g00680 pycom02g00690 pycom15g13670 |
| rosa_chinensis | RchiOBHm_Chr2g0085691 |
| rosa_laevigata | RLG00000015712 |
| rosa_multiflora | Rmu_sc0007631.1_g000005 |
| rosa_roxburghii | Rroxscaffold_2G00155120 |
| rosa_rugosa | Rorug01G0462300 Rorug01G0462400 Rorug01G0462500 Rorug01G0462600 |
| rosa_samantha | Rh2AG011500 Rh2BG012000 Rh2CG012800 Rh2DG013900 |
| rosa_wichuraiana | Rw2G001020 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 3 cut(s) | 1357, 1396, 1435 |
| Acc36I | ACCTGC | 1 cut(s) | 203 |
| AccBSI | CCGCTC | 1 cut(s) | 146 |
| AccI | GTMKAC | 2 cut(s) | 1216, 1482 |
| AccII | CGCG | 5 cut(s) | 161, 163, 410, 604, 1283 |
| AccIII | TCCGGA | 1 cut(s) | 1155 |
| AclWI | GGATC | 2 cut(s) | 210, 707 |
| AcoI | YGGCCR | 2 cut(s) | 3, 571 |
| AcsI | RAATTY | 2 cut(s) | 114, 489 |
| AcuI | CTGAAG | 3 cut(s) | 50, 1122, 1353 |
| AfaI | GTAC | 1 cut(s) | 469 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 180, 317, 723, 1116 |
| AgsI | TTSAA | 7 cut(s) | 77, 653, 964, 1000, 1169, 1467, 1574 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 505 |
| AjnI | CCWGG | 4 cut(s) | 279, 595, 1003, 1115 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 99, 131 |
| AluBI | AGCT | 8 cut(s) | 18, 138, 248, 823, 1142, 1376, 1415, 1547 |
| AluI | AGCT | 8 cut(s) | 18, 138, 248, 823, 1142, 1376, 1415, 1547 |
| Alw21I | GWGCWC | 8 cut(s) | 12, 20, 250, 623, 1270, 1378, 1417, 1456 |
| Alw26I | GTCTC | 2 cut(s) | 150, 1502 |
| Alw44I | GTGCAC | 1 cut(s) | 619 |
| AlwI | GGATC | 2 cut(s) | 210, 707 |
| Aor13HI | TCCGGA | 1 cut(s) | 1155 |
| AoxI | GGCC | 5 cut(s) | 3, 182, 571, 670, 1255 |
| ApaLI | GTGCAC | 1 cut(s) | 619 |
| ApeKI | GCWGC | 8 cut(s) | 293, 296, 657, 823, 1034, 1286, 1393, 1432 |
| ApoI | RAATTY | 2 cut(s) | 114, 489 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 118 |
| AspLEI | GCGC | 3 cut(s) | 163, 412, 1077 |
| AspS9I | GGNCC | 2 cut(s) | 182, 1256 |
| AsuHPI | GGTGA | 9 cut(s) | 369, 396, 920, 1070, 1108, 1370, 1409, 1517, 1538 |
| AsuII | TTCGAA | 1 cut(s) | 836 |
| AxyI | CCTNAGG | 1 cut(s) | 474 |
| BaeGI | GKGCMC | 1 cut(s) | 623 |
| BalI | TGGCCA | 1 cut(s) | 573 |
| BanII | GRGCYC | 4 cut(s) | 20, 250, 1378, 1417 |
| Bbv12I | GWGCWC | 8 cut(s) | 12, 20, 250, 623, 1270, 1378, 1417, 1456 |
| BbvI | GCAGC | 8 cut(s) | 305, 308, 644, 810, 1046, 1273, 1405, 1444 |
| BccI | CCATC | 6 cut(s) | 236, 542, 893, 1055, 1087, 1119 |
| BceAI | ACGGC | 2 cut(s) | 1160, 1178 |
| BciT130I | CCWGG | 4 cut(s) | 281, 597, 1005, 1117 |
| BclI | TGATCA | 1 cut(s) | 918 |
| BcoDI | GTCTC | 2 cut(s) | 150, 1502 |
| BfaI | CTAG | 1 cut(s) | 176 |
| BfmI | CTRYAG | 1 cut(s) | 1126 |
| BfuAI | ACCTGC | 1 cut(s) | 203 |
| Bme1390I | CCNGG | 4 cut(s) | 281, 597, 1005, 1117 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 505 |
| BmgT120I | GGNCC | 2 cut(s) | 182, 1256 |
| BmiI | GGNNCC | 2 cut(s) | 183, 261 |
| BmrFI | CCNGG | 4 cut(s) | 281, 597, 1005, 1117 |
| BmrI | ACTGGG | 2 cut(s) | 1348, 1465 |
| BmsI | GCATC | 4 cut(s) | 13, 764, 1121, 1136 |
| BmuI | ACTGGG | 2 cut(s) | 1348, 1465 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1255, 1287 |
| BpmI | CTGGAG | 2 cut(s) | 162, 579 |
| Bpu10I | CCTNAGC | 1 cut(s) | 315 |
| Bpu14I | TTCGAA | 1 cut(s) | 836 |
| BsaI | GGTCTC | 1 cut(s) | 1502 |
| BsaJI | CCNNGG | 3 cut(s) | 719, 1115, 1281 |
| BsaWI | WCCGGW | 1 cut(s) | 1155 |
| BsaXI | ACNNNNNCTCC | 1 cut(s) | 32 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 180, 317, 723, 1116 |
| Bse1I | ACTGG | 4 cut(s) | 563, 1354, 1471, 1507 |
| Bse21I | CCTNAGG | 1 cut(s) | 474 |
| Bse3DI | GCAATG | 2 cut(s) | 443, 1542 |
| BseAI | TCCGGA | 1 cut(s) | 1155 |
| BseBI | CCWGG | 4 cut(s) | 281, 597, 1005, 1117 |
| BseDI | CCNNGG | 3 cut(s) | 719, 1115, 1281 |
| BseGI | GGATG | 3 cut(s) | 1048, 1111, 1151 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 180, 317, 723, 1116 |
| BseMI | GCAATG | 2 cut(s) | 443, 1542 |
| BseMII | CTCAG | 9 cut(s) | 186, 200, 329, 465, 558, 621, 756, 990, 1550 |
| BseNI | ACTGG | 4 cut(s) | 563, 1354, 1471, 1507 |
| BseRI | GAGGAG | 5 cut(s) | 491, 739, 941, 1260, 1506 |
| BseSI | GKGCMC | 1 cut(s) | 623 |
| BseXI | GCAGC | 8 cut(s) | 305, 308, 644, 810, 1046, 1273, 1405, 1444 |
| BsgI | GTGCAG | 2 cut(s) | 231, 718 |
| Bsh1236I | CGCG | 5 cut(s) | 161, 163, 410, 604, 1283 |
| BshFI | GGCC | 5 cut(s) | 5, 184, 573, 672, 1257 |
| BsiHKAI | GWGCWC | 8 cut(s) | 12, 20, 250, 623, 1270, 1378, 1417, 1456 |
| BsiSI | CCGG | 1 cut(s) | 1156 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 180, 317, 723, 1116 |
| BsmAI | GTCTC | 2 cut(s) | 150, 1502 |
| BsmBI | CGTCTC | 1 cut(s) | 150 |
| BsmI | GAATGC | 1 cut(s) | 659 |
| BsnI | GGCC | 5 cut(s) | 5, 184, 573, 672, 1257 |
| Bso31I | GGTCTC | 1 cut(s) | 1502 |
| Bsp119I | TTCGAA | 1 cut(s) | 836 |
| Bsp1286I | GDGCHC | 8 cut(s) | 12, 20, 250, 623, 1270, 1378, 1417, 1456 |
| Bsp13I | TCCGGA | 1 cut(s) | 1155 |
| Bsp143I | GATC | 3 cut(s) | 202, 712, 918 |
| Bsp68I | TCGCGA | 1 cut(s) | 604 |
| BspANI | GGCC | 5 cut(s) | 5, 184, 573, 672, 1257 |
| BspCNI | CTCAG | 9 cut(s) | 187, 199, 328, 466, 557, 622, 757, 989, 1551 |
| BspEI | TCCGGA | 1 cut(s) | 1155 |
| BspFNI | CGCG | 5 cut(s) | 161, 163, 410, 604, 1283 |
| BspHI | TCATGA | 1 cut(s) | 709 |
| BspLI | GGNNCC | 2 cut(s) | 183, 261 |
| BspMI | ACCTGC | 1 cut(s) | 203 |
| BspPI | GGATC | 2 cut(s) | 210, 707 |
| BspT104I | TTCGAA | 1 cut(s) | 836 |
| BspTNI | GGTCTC | 1 cut(s) | 1502 |
| BsrBI | CCGCTC | 1 cut(s) | 146 |
| BsrDI | GCAATG | 2 cut(s) | 443, 1542 |
| BsrI | ACTGG | 4 cut(s) | 563, 1354, 1471, 1507 |
| BssECI | CCNNGG | 3 cut(s) | 719, 1115, 1281 |
| BssMI | GATC | 3 cut(s) | 202, 712, 918 |
| BssNAI | GTATAC | 1 cut(s) | 1217 |
| Bst1107I | GTATAC | 1 cut(s) | 1217 |
| Bst2UI | CCWGG | 4 cut(s) | 281, 597, 1005, 1117 |
| Bst4CI | ACNGT | 2 cut(s) | 342, 375 |
| Bst6I | CTCTTC | 1 cut(s) | 1560 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 761 |
| BstBI | TTCGAA | 1 cut(s) | 836 |
| BstC8I | GCNNGC | 2 cut(s) | 312, 1032 |
| BstDSI | CCRYGG | 1 cut(s) | 1281 |
| BstF5I | GGATG | 3 cut(s) | 1048, 1111, 1151 |
| BstFNI | CGCG | 5 cut(s) | 161, 163, 410, 604, 1283 |
| BstHHI | GCGC | 3 cut(s) | 163, 412, 1077 |
| BstKTI | GATC | 3 cut(s) | 205, 715, 921 |
| BstMAI | GTCTC | 2 cut(s) | 150, 1502 |
| BstMBI | GATC | 3 cut(s) | 202, 712, 918 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 761, 1286, 1292 |
| BstNI | CCWGG | 4 cut(s) | 281, 597, 1005, 1117 |
| BstNSI | RCATGY | 2 cut(s) | 1034, 1234 |
| BstSCI | CCNGG | 4 cut(s) | 279, 595, 1003, 1115 |
| BstSFI | CTRYAG | 1 cut(s) | 1126 |
| BstSLI | GKGCMC | 1 cut(s) | 623 |
| BstUI | CGCG | 5 cut(s) | 161, 163, 410, 604, 1283 |
| BstV1I | GCAGC | 8 cut(s) | 305, 308, 644, 810, 1046, 1273, 1405, 1444 |
| BstZ17I | GTATAC | 1 cut(s) | 1217 |
| Bsu36I | CCTNAGG | 1 cut(s) | 474 |
| BsuRI | GGCC | 5 cut(s) | 5, 184, 573, 672, 1257 |
| BtgI | CCRYGG | 1 cut(s) | 1281 |
| BtsCI | GGATG | 3 cut(s) | 1048, 1111, 1151 |
| BtsIMutI | CAGTG | 6 cut(s) | 212, 1361, 1368, 1407, 1446, 1478 |
| BtuMI | TCGCGA | 1 cut(s) | 604 |
| BveI | ACCTGC | 1 cut(s) | 203 |
| Cac8I | GCNNGC | 2 cut(s) | 312, 1032 |
| CciI | TCATGA | 1 cut(s) | 709 |
| CfoI | GCGC | 3 cut(s) | 163, 412, 1077 |
| Cfr13I | GGNCC | 2 cut(s) | 182, 1256 |
| Cfr42I | CCGCGG | 1 cut(s) | 1284 |
| CseI | GACGC | 3 cut(s) | 167, 1399, 1438 |
| Csp6I | GTAC | 1 cut(s) | 468 |
| CviAII | CATG | 7 cut(s) | 710, 1031, 1220, 1226, 1231, 1253, 1300 |
| CviQI | GTAC | 1 cut(s) | 468 |
| DpnI | GATC | 3 cut(s) | 204, 714, 920 |
| DpnII | GATC | 3 cut(s) | 202, 712, 918 |
| DrdI | GACNNNNNNGTC | 3 cut(s) | 1357, 1396, 1435 |
| DriI | GACNNNNNGTC | 1 cut(s) | 505 |
| DseDI | GACNNNNNNGTC | 3 cut(s) | 1357, 1396, 1435 |
| EaeI | YGGCCR | 2 cut(s) | 3, 571 |
| Eam1104I | CTCTTC | 1 cut(s) | 1560 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 505 |
| EarI | CTCTTC | 1 cut(s) | 1560 |
| Ecl136II | GAGCTC | 4 cut(s) | 18, 248, 1376, 1415 |
| Eco24I | GRGCYC | 4 cut(s) | 20, 250, 1378, 1417 |
| Eco31I | GGTCTC | 1 cut(s) | 1502 |
| Eco53kI | GAGCTC | 4 cut(s) | 18, 248, 1376, 1415 |
| Eco57I | CTGAAG | 3 cut(s) | 50, 1122, 1353 |
| Eco81I | CCTNAGG | 1 cut(s) | 474 |
| EcoICRI | GAGCTC | 4 cut(s) | 18, 248, 1376, 1415 |
| EcoO109I | RGGNCCY | 1 cut(s) | 182 |
| EcoRI | GAATTC | 1 cut(s) | 114 |
| EcoRII | CCWGG | 4 cut(s) | 279, 595, 1003, 1115 |
| EcoT38I | GRGCYC | 4 cut(s) | 20, 250, 1378, 1417 |
| Esp3I | CGTCTC | 1 cut(s) | 150 |
| FaeI | CATG | 7 cut(s) | 713, 1034, 1223, 1229, 1234, 1256, 1303 |
| FatI | CATG | 7 cut(s) | 709, 1030, 1219, 1225, 1230, 1252, 1299 |
| FauI | CCCGC | 3 cut(s) | 172, 415, 1030 |
| FbaI | TGATCA | 1 cut(s) | 918 |
| FblI | GTMKAC | 2 cut(s) | 1216, 1482 |
| FokI | GGATG | 3 cut(s) | 1055, 1098, 1158 |
| FriOI | GRGCYC | 4 cut(s) | 20, 250, 1378, 1417 |
| FspBI | CTAG | 1 cut(s) | 176 |
| GlaI | GCGC | 3 cut(s) | 162, 411, 1076 |
| GsuI | CTGGAG | 2 cut(s) | 162, 579 |
| HaeIII | GGCC | 5 cut(s) | 5, 184, 573, 672, 1257 |
| HapII | CCGG | 1 cut(s) | 1156 |
| HgaI | GACGC | 3 cut(s) | 167, 1399, 1438 |
| HhaI | GCGC | 3 cut(s) | 163, 412, 1077 |
| Hin1II | CATG | 7 cut(s) | 713, 1034, 1223, 1229, 1234, 1256, 1303 |
| Hin6I | GCGC | 3 cut(s) | 161, 410, 1075 |
| HinP1I | GCGC | 3 cut(s) | 161, 410, 1075 |
| HincII | GTYRAC | 2 cut(s) | 192, 226 |
| HindII | GTYRAC | 2 cut(s) | 192, 226 |
| HinfI | GANTC | 5 cut(s) | 149, 815, 947, 989, 1541 |
| HpaI | GTTAAC | 2 cut(s) | 192, 226 |
| HpaII | CCGG | 1 cut(s) | 1156 |
| HphI | GGTGA | 9 cut(s) | 369, 396, 920, 1070, 1108, 1370, 1409, 1517, 1538 |
| Hpy166II | GTNNAC | 9 cut(s) | 192, 226, 621, 691, 1217, 1366, 1405, 1444, 1483 |
| Hpy8I | GTNNAC | 9 cut(s) | 192, 226, 621, 691, 1217, 1366, 1405, 1444, 1483 |
| Hpy99I | CGWCG | 2 cut(s) | 1393, 1432 |
| HpyAV | CCTTC | 5 cut(s) | 129, 193, 445, 1093, 1328 |
| HpyCH4III | ACNGT | 2 cut(s) | 342, 375 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 761, 1286, 1292 |
| Hsp92II | CATG | 7 cut(s) | 713, 1034, 1223, 1229, 1234, 1256, 1303 |
| HspAI | GCGC | 3 cut(s) | 161, 410, 1075 |
| Kpn2I | TCCGGA | 1 cut(s) | 1155 |
| Ksp22I | TGATCA | 1 cut(s) | 918 |
| KspAI | GTTAAC | 2 cut(s) | 192, 226 |
| KspI | CCGCGG | 1 cut(s) | 1284 |
| Kzo9I | GATC | 3 cut(s) | 202, 712, 918 |
| Lsp1109I | GCAGC | 8 cut(s) | 305, 308, 644, 810, 1046, 1273, 1405, 1444 |
| LweI | GCATC | 4 cut(s) | 13, 764, 1121, 1136 |
| MaeI | CTAG | 1 cut(s) | 176 |
| MaeIII | GTNAC | 7 cut(s) | 86, 129, 375, 388, 551, 728, 971 |
| MalI | GATC | 3 cut(s) | 204, 714, 920 |
| MbiI | CCGCTC | 1 cut(s) | 146 |
| MboI | GATC | 3 cut(s) | 202, 712, 918 |
| MfeI | CAATTG | 1 cut(s) | 264 |
| MhlI | GDGCHC | 8 cut(s) | 12, 20, 250, 623, 1270, 1378, 1417, 1456 |
| MlsI | TGGCCA | 1 cut(s) | 573 |
| MluCI | AATT | 9 cut(s) | 114, 251, 264, 420, 489, 684, 861, 1306, 1496 |
| MluNI | TGGCCA | 1 cut(s) | 573 |
| MlyI | GAGTC | 1 cut(s) | 158 |
| MmeI | TCCRAC | 1 cut(s) | 380 |
| Mox20I | TGGCCA | 1 cut(s) | 573 |
| MroI | TCCGGA | 1 cut(s) | 1155 |
| MroXI | GAANNNNTTC | 1 cut(s) | 118 |
| MscI | TGGCCA | 1 cut(s) | 573 |
| MseI | TTAA | 3 cut(s) | 191, 225, 504 |
| MslI | CAYNNNNRTG | 3 cut(s) | 708, 936, 1224 |
| Msp20I | TGGCCA | 1 cut(s) | 573 |
| MspA1I | CMGCKG | 5 cut(s) | 1037, 1142, 1283, 1396, 1435 |
| MspI | CCGG | 1 cut(s) | 1156 |
| MspR9I | CCNGG | 4 cut(s) | 281, 597, 1005, 1117 |
| MunI | CAATTG | 1 cut(s) | 264 |
| Mva1269I | GAATGC | 1 cut(s) | 659 |
| MvaI | CCWGG | 4 cut(s) | 281, 597, 1005, 1117 |
| MvnI | CGCG | 5 cut(s) | 161, 163, 410, 604, 1283 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 761, 1286, 1292 |
| NdeII | GATC | 3 cut(s) | 202, 712, 918 |
| NlaIII | CATG | 7 cut(s) | 713, 1034, 1223, 1229, 1234, 1256, 1303 |
| NlaIV | GGNNCC | 2 cut(s) | 183, 261 |
| NmeAIII | GCCGAG | 1 cut(s) | 31 |
| NmuCI | GTSAC | 2 cut(s) | 86, 375 |
| NruI | TCGCGA | 1 cut(s) | 604 |
| NspI | RCATGY | 2 cut(s) | 1034, 1234 |
| NspV | TTCGAA | 1 cut(s) | 836 |
| PaeI | GCATGC | 1 cut(s) | 1034 |
| PagI | TCATGA | 1 cut(s) | 709 |
| PctI | GAATGC | 1 cut(s) | 659 |
| PdmI | GAANNNNTTC | 1 cut(s) | 118 |
| PfeI | GAWTC | 4 cut(s) | 815, 947, 989, 1541 |
| PleI | GAGTC | 1 cut(s) | 157 |
| PpsI | GAGTC | 1 cut(s) | 157 |
| Psp124BI | GAGCTC | 4 cut(s) | 20, 250, 1378, 1417 |
| Psp6I | CCWGG | 4 cut(s) | 279, 595, 1003, 1115 |
| PspGI | CCWGG | 4 cut(s) | 279, 595, 1003, 1115 |
| PspN4I | GGNNCC | 2 cut(s) | 183, 261 |
| PspPI | GGNCC | 2 cut(s) | 182, 1256 |
| PvuII | CAGCTG | 1 cut(s) | 1142 |
| RruI | TCGCGA | 1 cut(s) | 604 |
| RsaI | GTAC | 1 cut(s) | 469 |
| RsaNI | GTAC | 1 cut(s) | 468 |
| RseI | CAYNNNNRTG | 3 cut(s) | 708, 936, 1224 |
| SacI | GAGCTC | 4 cut(s) | 20, 250, 1378, 1417 |
| SacII | CCGCGG | 1 cut(s) | 1284 |
| SaqAI | TTAA | 3 cut(s) | 191, 225, 504 |
| Sau3AI | GATC | 3 cut(s) | 202, 712, 918 |
| Sau96I | GGNCC | 2 cut(s) | 182, 1256 |
| SchI | GAGTC | 1 cut(s) | 158 |
| ScrFI | CCNGG | 4 cut(s) | 281, 597, 1005, 1117 |
| SduI | GDGCHC | 8 cut(s) | 12, 20, 250, 623, 1270, 1378, 1417, 1456 |
| SfaNI | GCATC | 4 cut(s) | 13, 764, 1121, 1136 |
| SfcI | CTRYAG | 1 cut(s) | 1126 |
| Sfr303I | CCGCGG | 1 cut(s) | 1284 |
| SfuI | TTCGAA | 1 cut(s) | 836 |
| SgrBI | CCGCGG | 1 cut(s) | 1284 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 708, 936, 1224 |
| SphI | GCATGC | 1 cut(s) | 1034 |
| Sse9I | AATT | 9 cut(s) | 114, 251, 264, 420, 489, 684, 861, 1306, 1496 |
| SspI | AATATT | 1 cut(s) | 983 |
| SspMI | CTAG | 1 cut(s) | 176 |
| SstI | GAGCTC | 4 cut(s) | 20, 250, 1378, 1417 |
| StyD4I | CCNGG | 4 cut(s) | 279, 595, 1003, 1115 |
| TaaI | ACNGT | 2 cut(s) | 342, 375 |
| TaqI | TCGA | 6 cut(s) | 152, 836, 1349, 1388, 1427, 1549 |
| TasI | AATT | 9 cut(s) | 114, 251, 264, 420, 489, 684, 861, 1306, 1496 |
| TauI | GCSGC | 3 cut(s) | 1252, 1283, 1286 |
| TfiI | GAWTC | 4 cut(s) | 815, 947, 989, 1541 |
| Tru1I | TTAA | 3 cut(s) | 191, 225, 504 |
| Tru9I | TTAA | 3 cut(s) | 191, 225, 504 |
| TscAI | CASTG | 6 cut(s) | 212, 1361, 1368, 1407, 1446, 1478 |
| TseFI | GTSAC | 2 cut(s) | 86, 375 |
| TseI | GCWGC | 8 cut(s) | 293, 296, 657, 823, 1034, 1286, 1393, 1432 |
| Tsp45I | GTSAC | 2 cut(s) | 86, 375 |
| TspDTI | ATGAA | 4 cut(s) | 72, 96, 954, 1316 |
| TspRI | CASTG | 6 cut(s) | 212, 1361, 1368, 1407, 1446, 1478 |
| VneI | GTGCAC | 1 cut(s) | 619 |
| XapI | RAATTY | 2 cut(s) | 114, 489 |
| XceI | RCATGY | 2 cut(s) | 1034, 1234 |
| XmiI | GTMKAC | 2 cut(s) | 1216, 1482 |
| XmnI | GAANNNNTTC | 1 cut(s) | 118 |
| XspI | CTAG | 1 cut(s) | 176 |