Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0003910

Physical Location & Seq

Genomic Coordinates Forward (+)

15652775 .. 15655531

Gene Structure 2757 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G32430.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2292 bp

ATGACCCTTCTGAACTATCTACACTGTAATCGCTCAAAATCATTTCTTTTTCAGAGATTTTACTCTCCTTATAGAATTGCTCACAAGCTGTTCGATGGAAGTTCCCAAAGAAATGCGACAACTTCCATTAACCATTCAATCAGTGAATCCTTACGGAGAAATTCTCCGGCACGAGCTCTTTCGATCTTCAAGGAAAATCTCCAGCTGGGTTATTTTGGTCGTCATATGGACGAAGTTACTCTTTGTCTTGCGCTTAAAGCATGTCGTGGAGACTTGAAACGCGGCTGCCAAATCCACGGGTTTTCCACAACTTCTGGGTTCACTTCCTTTGTTTGTGTTTCAAACGCAGTAATGGGTATGTACCGTAAAGCCGGTCGCTTTGACAATGCTTTGTGCATATTTGAGAATCTGGTTGATCCTGATGTTGTTTCTTGGAACACTATACTCTCTGGGTTTGATGACAATCAAATTGCTCTGAATTTTGTTGTTAGGATGAAATCTGCTGGAGTAGTTTTTGACGCATTCACTTATTCCACTGCTCTTAGCTTCTGTGTGGGCTCTGAAGGATTTCTTTTAGGATTGCAGTTGCAGTCAACTGTGGTGAAAACCGGACTGGAGTCTGATCTTGTCGTTGGAAACTCGTTTATTACAATGTATTCGCGGTCTGGAAGTTTCAGAGGAGCTCGGAGAGTTTTTGATGAAATGTCGTTTAAGGATATGATTTCATGGAACTCTTTATTGTCAGGACTTTCTCAAGAAGGCACTTTCGGGTTTGAAGCAGTGGTTATCTTTAGGGACATGATGCGAGAAGGTGTGGAGCTTGATCACGTGTCTTTTACTAGCGTGATTACTACCTGTTGTCACGAAACTGACTTGAAGCTGGCCAGGCAAATTCATGGTTTGTGCATAAAAAGAGGTTATGAATCACTTTTAGAAGTTGGTAATATTTTGATGTCAAGGTACTCCAAGTGTGGGGTTTTGGAAGCTGTGAAATCAGTGTTTCACCAAATGAGTGAGCGGAATGTTGTCTCTTGGACAACAATGATTTCCTCGAATAAAGACGATGCTGTGTCCATCTTCCTTAATATGCGGTTTGATGGAGTTTACCCTAACGAGGTCACTTTTGTTGGATTAATCAATGCCGTGAAGTGCAATGAGCAAATCAAAGAAGGGCTTAAAATTCATGGGCTATGCATCAAGACAGGCTTTGTTTCAGAACCATCTGTAGGCAACAGTTTCATCACATTGTATGCCAAGTTTGAGGCTCTGGAAGATGCCAAGAAGGCTTTTGAGGATATAACTTTCCGGGAGATTATATCCTGGAATGCTATGATATCTGGATTTGCACAAAATGGATTCTCTCATGAAGCTCTCAAGATGTTCTTATCCGCAGCAGCAGAAACAATGCCGAATGAATACACTTTCGGAAGTGTCTTGAATGCAATAGCTTTTGCAGAGGATATATCTGTAAAGCAAGGTCAGCGTTGCCATGCTCATTTACTGAAATTGGGTTTGAATAGTTGTCCTGTTGTTTCAAGCGCGCTTCTTGATATGTACGCCAAGCGTGGGAACATTGATGAATCTGAGAAAGTCTTTAACGAGATGTCTCAAAAGAACCAATTTGTTTGGACATCGATAATATCAGCCTATTCAAGCCACGGTGATTTTGAAACCGTGATGAACTTGTTCCACAAGATGATTAAAGAAAACGTAGCACCAGACCTAGTCACTTTTCTCTCTGTGTTAACAGCTTGTAATAGAAAAGGAATGGTAGACAAGGGCTATGAGATTTTCAACATGATGATCGAAGTCTACAATCTTGAGCCGTCTCATGAGCATTACTCATGTATGGTTGATATGCTTGGCCGAGCTGGGAGATTGAAAGAAGCAGAAGAGCTTATGAGTGAGGTTCCTGGAGGACCAGGAGAGTCGATGCTTCAGAGCATGCTCGGGTCTTGTAGGCTGCACGGGAATGTGAAAATGGGAGCAAAAGTGGCTGAGCTTGCAATGGAAATGAAACCGGAACTGTCAGGTTCTTACGTTCAGATGTATAACATCTATGCAGAGAAAGAAGAGTGGGATAAAGCTGCAGAGATCAGGAAAGCAATGAGGAAGAAAAACGTAAGTAAAGAAGCTGGATTCAGTTGGATCGATGTTGGTGACACTGAAGGGTCTTTAACGATGCAAGGTTTCTCTTCAGGGGATAAGTCTCATCCAAAATCTGATGAGATTTATAGAATGGTGGAAATTATTGGATTGGAGATGAATTTGGAGGGGAAAGTTGCAGTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000960 GO:0000962 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010468 GO:0010604 GO:0016070 GO:0016787 GO:0016788 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031329 GO:0031331 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0045935 GO:0046483 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0061013 GO:0061014 GO:0065007 GO:0071704 GO:0080090 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363 GO:1903311 GO:1903313 GO:1905637 GO:1905639

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

763

Amino Acids

85.18

Weight (kDa)

6.14

Isoelectric Point (pI)

37.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	107 - 156	4.2e-08	PPR repeat family
PPR_2	PF13041	407 - 453	5e-10	PPR repeat family
PPR_long	PF17177	407 - 495	9.8e-06	Pentacotripeptide-repeat region of PRORP
PPR	PF01535	410 - 439	1.6e-06	PPR repeat
E_motif	PF20431	524 - 586	3.4e-11	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003910)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G32430 AT4G32430
fragaria_vesca	FvH4_1g03430
malus_domestica	MD15G1174400.v1.1
prunus_persica	Prupe.5G003100_v2.0.a1 Prupe.7G240400_v2.0.a1 Prupe.7G241500_v2.0.a1 Prupe.7G241700_v2.0.a1 Prupe.8G249000_v2.0.a1
pyrus_communis	pycom15g15600
rosa_chinensis	RchiOBHm_Chr2g0088661 RchiOBHm_Chr5g0002171
rosa_laevigata	RLG00000015973 RLG00000015974 RLG00000031004
rosa_multiflora	Rmu_sc0006835.1_g000012 Rmu_sc0006835.1_g000013 Rmu_sc0013155.1_g000001 Rmu_sc0015442.1_g000012 Rmu_sc0015442.1_g000013 Rmu_sc0024326.1_g000001 Rmu_sc0041985.1_g000001
rosa_roxburghii	Rroxscaffold_2G00152420
rosa_rugosa	Rorug01G0485700
rosa_samantha	Rh2AG041200 Rh2BG039900 Rh2CG040700 Rh2DG040300 Rh5AG016800 Rh5AG016900 Rh5CG018300 Rh5CG018400 Rh5CG018500
rosa_wichuraiana	Rw2G003320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	1018
AccI	GTMKAC	2 cut(s)	1773, 1812
AccII	CGCG	3 cut(s)	282, 661, 1541
AciI	CCGC	5 cut(s)	282, 661, 1018, 1090, 1389
AclWI	GGATC	2 cut(s)	410, 2156
AcoI	YGGCCR	2 cut(s)	882, 1864
AcsI	RAATTY	5 cut(s)	160, 478, 891, 1179, 2266
AcuI	CTGAAG	4 cut(s)	582, 1922, 2181, 2187
AcvI	CACGTG	1 cut(s)	829
AfaI	GTAC	3 cut(s)	362, 962, 1556
AfiI	CCNNNNNNNGG	4 cut(s)	972, 1114, 1226, 1566
AflIII	ACRYGT	1 cut(s)	828
AjnI	CCWGG	4 cut(s)	884, 1319, 1912, 1921
Alw21I	GWGCWC	2 cut(s)	178, 685
Alw26I	GTCTC	5 cut(s)	264, 1033, 1611, 1833, 2214
AlwI	GGATC	2 cut(s)	410, 2156
Ama87I	CYCGRG	1 cut(s)	1949
AoxI	GGCC	2 cut(s)	882, 1864
ApeKI	GCWGC	5 cut(s)	285, 1391, 1394, 1963, 2087
ApoI	RAATTY	5 cut(s)	160, 478, 891, 1179, 2266
AseI	ATTAAT	1 cut(s)	1133
Asp700I	GAANNNNTTC	2 cut(s)	567, 1685
AspLEI	GCGC	3 cut(s)	253, 1541, 1543
AspS9I	GGNCC	1 cut(s)	1919
AsuC2I	CCSGG	1 cut(s)	1307
AsuHPI	GGTGA	4 cut(s)	613, 995, 1673, 2171
AvaI	CYCGRG	1 cut(s)	1949
AvaII	GGWCC	1 cut(s)	1919
BalI	TGGCCA	1 cut(s)	884
BanII	GRGCYC	3 cut(s)	178, 560, 685
BauI	CACGAG	1 cut(s)	171
BbrPI	CACGTG	1 cut(s)	829
Bbv12I	GWGCWC	2 cut(s)	178, 685
BbvI	GCAGC	5 cut(s)	272, 1403, 1406, 1950, 2074
BccI	CCATC	4 cut(s)	89, 1082, 1091, 1228
BceAI	ACGGC	2 cut(s)	1127, 1810
BciT130I	CCWGG	4 cut(s)	886, 1321, 1914, 1923
BclI	TGATCA	1 cut(s)	823
BcnI	CCSGG	1 cut(s)	1307
BcoDI	GTCTC	5 cut(s)	264, 1033, 1611, 1833, 2214
BfaI	CTAG	2 cut(s)	840, 1724
BfmI	CTRYAG	2 cut(s)	1224, 2088
BglI	GCCNNNNNGGC	1 cut(s)	1283
BisI	GCNGC	6 cut(s)	283, 286, 1392, 1395, 1964, 2088
BlpI	GCTNAGC	1 cut(s)	1998
BlsI	GCNGC	6 cut(s)	284, 287, 1393, 1396, 1965, 2089
Bme1390I	CCNGG	5 cut(s)	886, 1307, 1321, 1914, 1923
Bme18I	GGWCC	1 cut(s)	1919
BmeT110I	CYCGRG	1 cut(s)	1949
BmgT120I	GGNCC	1 cut(s)	1919
BmiI	GGNNCC	1 cut(s)	1911
BmrFI	CCNGG	5 cut(s)	886, 1307, 1321, 1914, 1923
BmsI	GCATC	6 cut(s)	792, 1054, 1203, 1264, 1923, 2172
BoxI	GACNNNNGTC	1 cut(s)	616
BplI	GAGNNNNNCTC	4 cut(s)	148, 180, 1826, 1858
BpmI	CTGGAG	4 cut(s)	185, 525, 635, 1935
Bpu1102I	GCTNAGC	1 cut(s)	1998
BpuEI	CTTGAG	3 cut(s)	738, 1358, 1841
BpuMI	CCSGG	1 cut(s)	1307
Bsa29I	ATCGAT	2 cut(s)	1634, 2151
BsaAI	YACGTR	1 cut(s)	829
BsaBI	GATNNNNATC	1 cut(s)	462
BsaJI	CCNNGG	2 cut(s)	295, 1657
BsaWI	WCCGGW	2 cut(s)	608, 2020
BsaXI	ACNNNNNCTCC	2 cut(s)	1977, 2007
Bsc4I	CCNNNNNNNGG	4 cut(s)	972, 1114, 1226, 1566
Bse118I	RCCGGY	1 cut(s)	371
Bse1I	ACTGG	1 cut(s)	618
Bse3DI	GCAATG	3 cut(s)	1159, 2013, 2112
Bse8I	GATNNNNATC	1 cut(s)	462
BseBI	CCWGG	4 cut(s)	886, 1321, 1914, 1923
BseCI	ATCGAT	2 cut(s)	1634, 2151
BseDI	CCNNGG	2 cut(s)	295, 1657
BseGI	GGATG	2 cut(s)	498, 2212
BseJI	GATNNNNATC	1 cut(s)	462
BseLI	CCNNNNNNNGG	4 cut(s)	972, 1114, 1226, 1566
BseMI	GCAATG	3 cut(s)	1159, 2013, 2112
BseMII	CTCAG	2 cut(s)	1575, 1989
BseNI	ACTGG	1 cut(s)	618
BsePI	GCGCGC	1 cut(s)	1539
BseRI	GAGGAG	1 cut(s)	693
BseXI	GCAGC	5 cut(s)	272, 1403, 1406, 1950, 2074
BseYI	CCCAGC	2 cut(s)	205, 1871
BsgI	GTGCAG	1 cut(s)	1949
Bsh1236I	CGCG	3 cut(s)	282, 661, 1541
Bsh1285I	CGRYCG	1 cut(s)	376
BshFI	GGCC	2 cut(s)	884, 1866
BshVI	ATCGAT	2 cut(s)	1634, 2151
BsiEI	CGRYCG	1 cut(s)	376
BsiHKAI	GWGCWC	2 cut(s)	178, 685
BsiHKCI	CYCGRG	1 cut(s)	1949
BsiSI	CCGG	5 cut(s)	167, 372, 609, 1306, 2021
BslFI	GGGAC	1 cut(s)	809
BslI	CCNNNNNNNGG	4 cut(s)	972, 1114, 1226, 1566
BsmAI	GTCTC	5 cut(s)	264, 1033, 1611, 1833, 2214
BsmBI	CGTCTC	1 cut(s)	1833
BsmFI	GGGAC	1 cut(s)	809
BsmI	GAATGC	3 cut(s)	521, 1330, 1444
BsnI	GGCC	2 cut(s)	884, 1866
BsoBI	CYCGRG	1 cut(s)	1949
Bsp1286I	GDGCHC	3 cut(s)	178, 560, 685
Bsp143I	GATC	7 cut(s)	183, 415, 622, 823, 1803, 2094, 2148
Bsp1720I	GCTNAGC	1 cut(s)	1998
BspACI	CCGC	5 cut(s)	282, 661, 1018, 1090, 1389
BspANI	GGCC	2 cut(s)	884, 1866
BspCNI	CTCAG	2 cut(s)	1576, 1990
BspDI	ATCGAT	2 cut(s)	1634, 2151
BspFNI	CGCG	3 cut(s)	282, 661, 1541
BspHI	TCATGA	2 cut(s)	1363, 1831
BspLI	GGNNCC	1 cut(s)	1911
BspMAI	CTGCAG	1 cut(s)	2092
BspPI	GGATC	2 cut(s)	410, 2156
BspQI	GCTCTTC	1 cut(s)	1887
BsrBI	CCGCTC	1 cut(s)	1018
BsrDI	GCAATG	3 cut(s)	1159, 2013, 2112
BsrFI	RCCGGY	1 cut(s)	371
BsrI	ACTGG	1 cut(s)	618
BssAI	RCCGGY	1 cut(s)	371
BssECI	CCNNGG	2 cut(s)	295, 1657
BssHII	GCGCGC	1 cut(s)	1539
BssMI	GATC	7 cut(s)	183, 415, 622, 823, 1803, 2094, 2148
BssSI	CACGAG	1 cut(s)	171
Bst2BI	CACGAG	1 cut(s)	171
Bst2UI	CCWGG	4 cut(s)	886, 1321, 1914, 1923
Bst4CI	ACNGT	7 cut(s)	26, 365, 598, 1235, 1661, 1675, 2028
Bst6I	CTCTTC	3 cut(s)	1887, 2067, 2200
BstBAI	YACGTR	1 cut(s)	829
BstC8I	GCNNGC	4 cut(s)	882, 1541, 1946, 2004
BstDEI	CTNAG	3 cut(s)	542, 1584, 1998
BstDSI	CCRYGG	2 cut(s)	295, 1657
BstF5I	GGATG	2 cut(s)	498, 2212
BstFNI	CGCG	3 cut(s)	282, 661, 1541
BstHHI	GCGC	3 cut(s)	253, 1541, 1543
BstKTI	GATC	7 cut(s)	186, 418, 625, 826, 1806, 2097, 2151
BstMAI	GTCTC	5 cut(s)	264, 1033, 1611, 1833, 2214
BstMBI	GATC	7 cut(s)	183, 415, 622, 823, 1803, 2094, 2148
BstMCI	CGRYCG	1 cut(s)	376
BstMWI	GCNNNNNNNGC	6 cut(s)	257, 886, 1283, 1480, 1994, 2003
BstNI	CCWGG	4 cut(s)	886, 1321, 1914, 1923
BstNSI	RCATGY	2 cut(s)	264, 1948
BstPAI	GACNNNNGTC	1 cut(s)	616
BstSCI	CCNGG	5 cut(s)	884, 1305, 1319, 1912, 1921
BstSFI	CTRYAG	2 cut(s)	1224, 2088
BstUI	CGCG	3 cut(s)	282, 661, 1541
BstV1I	GCAGC	5 cut(s)	272, 1403, 1406, 1950, 2074
Bsu15I	ATCGAT	2 cut(s)	1634, 2151
BsuRI	GGCC	2 cut(s)	884, 1866
BsuTUI	ATCGAT	2 cut(s)	1634, 2151
BtgI	CCRYGG	2 cut(s)	295, 1657
BtsCI	GGATG	2 cut(s)	498, 2212
BtsI	GCAGTG	2 cut(s)	534, 786
BtsIMutI	CAGTG	6 cut(s)	22, 148, 534, 786, 1002, 2163
Cac8I	GCNNGC	4 cut(s)	882, 1541, 1946, 2004
CciI	TCATGA	2 cut(s)	1363, 1831
CfoI	GCGC	3 cut(s)	253, 1541, 1543
Cfr10I	RCCGGY	1 cut(s)	371
Cfr13I	GGNCC	1 cut(s)	1919
ClaI	ATCGAT	2 cut(s)	1634, 2151
CseI	GACGC	1 cut(s)	527
Csp6I	GTAC	3 cut(s)	361, 961, 1555
CviQI	GTAC	3 cut(s)	361, 961, 1555
DdeI	CTNAG	3 cut(s)	542, 1584, 1998
DpnI	GATC	7 cut(s)	185, 417, 624, 825, 1805, 2096, 2150
DpnII	GATC	7 cut(s)	183, 415, 622, 823, 1803, 2094, 2148
EaeI	YGGCCR	2 cut(s)	882, 1864
Eam1104I	CTCTTC	3 cut(s)	1887, 2067, 2200
EarI	CTCTTC	3 cut(s)	1887, 2067, 2200
Ecl136II	GAGCTC	2 cut(s)	176, 683
Eco24I	GRGCYC	3 cut(s)	178, 560, 685
Eco32I	GATATC	1 cut(s)	1335
Eco47I	GGWCC	1 cut(s)	1919
Eco53kI	GAGCTC	2 cut(s)	176, 683
Eco57I	CTGAAG	4 cut(s)	582, 1922, 2181, 2187
Eco72I	CACGTG	1 cut(s)	829
Eco88I	CYCGRG	1 cut(s)	1949
EcoICRI	GAGCTC	2 cut(s)	176, 683
EcoRII	CCWGG	4 cut(s)	884, 1319, 1912, 1921
EcoRV	GATATC	1 cut(s)	1335
EcoT22I	ATGCAT	1 cut(s)	1196
EcoT38I	GRGCYC	3 cut(s)	178, 560, 685
Esp3I	CGTCTC	1 cut(s)	1833
FaqI	GGGAC	1 cut(s)	809
FauNDI	CATATG	1 cut(s)	225
FbaI	TGATCA	1 cut(s)	823
FblI	GTMKAC	2 cut(s)	1773, 1812
Fnu4HI	GCNGC	6 cut(s)	283, 286, 1392, 1395, 1964, 2088
FokI	GGATG	2 cut(s)	505, 2199
FriOI	GRGCYC	3 cut(s)	178, 560, 685
Fsp4HI	GCNGC	6 cut(s)	283, 286, 1392, 1395, 1964, 2088
FspBI	CTAG	2 cut(s)	840, 1724
GlaI	GCGC	3 cut(s)	252, 1540, 1542
GluI	GCNGC	6 cut(s)	283, 286, 1392, 1395, 1964, 2088
GsaI	CCCAGC	2 cut(s)	209, 1875
GsuI	CTGGAG	4 cut(s)	185, 525, 635, 1935
HaeIII	GGCC	2 cut(s)	884, 1866
HapII	CCGG	5 cut(s)	167, 372, 609, 1306, 2021
HgaI	GACGC	1 cut(s)	527
HhaI	GCGC	3 cut(s)	253, 1541, 1543
Hin6I	GCGC	3 cut(s)	251, 1539, 1541
HinP1I	GCGC	3 cut(s)	251, 1539, 1541
HincII	GTYRAC	2 cut(s)	594, 1746
HindII	GTYRAC	2 cut(s)	594, 1746
HinfI	GANTC	8 cut(s)	146, 406, 617, 923, 1356, 1580, 1928, 2139
HpaI	GTTAAC	1 cut(s)	1746
HpaII	CCGG	5 cut(s)	167, 372, 609, 1306, 2021
HphI	GGTGA	4 cut(s)	613, 995, 1673, 2171
Hpy166II	GTNNAC	6 cut(s)	321, 594, 1105, 1746, 1774, 1813
Hpy8I	GTNNAC	6 cut(s)	321, 594, 1105, 1746, 1774, 1813
HpyAV	CCTTC	7 cut(s)	17, 557, 752, 803, 1163, 1276, 2162
HpyCH4III	ACNGT	7 cut(s)	26, 365, 598, 1235, 1661, 1675, 2028
HpyCH4IV	ACGT	4 cut(s)	828, 1710, 2040, 2121
HpyF10VI	GCNNNNNNNGC	6 cut(s)	257, 886, 1283, 1480, 1994, 2003
HpyF3I	CTNAG	3 cut(s)	542, 1584, 1998
HpySE526I	ACGT	4 cut(s)	828, 1710, 2040, 2121
HspAI	GCGC	3 cut(s)	251, 1539, 1541
Ksp22I	TGATCA	1 cut(s)	823
KspAI	GTTAAC	1 cut(s)	1746
Kzo9I	GATC	7 cut(s)	183, 415, 622, 823, 1803, 2094, 2148
LguI	GCTCTTC	1 cut(s)	1887
LmnI	GCTCC	3 cut(s)	680, 817, 1985
Lsp1109I	GCAGC	5 cut(s)	272, 1403, 1406, 1950, 2074
LweI	GCATC	6 cut(s)	792, 1054, 1203, 1264, 1923, 2172
MaeI	CTAG	2 cut(s)	840, 1724
MaeII	ACGT	4 cut(s)	828, 1710, 2040, 2121
MaeIII	GTNAC	5 cut(s)	235, 860, 1117, 1726, 2159
MalI	GATC	7 cut(s)	185, 417, 624, 825, 1805, 2096, 2150
MbiI	CCGCTC	1 cut(s)	1018
MboI	GATC	7 cut(s)	183, 415, 622, 823, 1803, 2094, 2148
MboII	GAAGA	7 cut(s)	178, 1069, 1283, 1904, 2084, 2125, 2187
MhlI	GDGCHC	3 cut(s)	178, 560, 685
MlsI	TGGCCA	1 cut(s)	884
MluNI	TGGCCA	1 cut(s)	884
MlyI	GAGTC	2 cut(s)	626, 1937
MmeI	TCCRAC	3 cut(s)	613, 1108, 2126
Mox20I	TGGCCA	1 cut(s)	884
Mph1103I	ATGCAT	1 cut(s)	1196
MroXI	GAANNNNTTC	2 cut(s)	567, 1685
MscI	TGGCCA	1 cut(s)	884
MslI	CAYNNNNRTG	1 cut(s)	1971
Msp20I	TGGCCA	1 cut(s)	884
MspA1I	CMGCKG	1 cut(s)	205
MspI	CCGG	5 cut(s)	167, 372, 609, 1306, 2021
MspR9I	CCNGG	5 cut(s)	886, 1307, 1321, 1914, 1923
Mva1269I	GAATGC	3 cut(s)	521, 1330, 1444
MvaI	CCWGG	4 cut(s)	886, 1321, 1914, 1923
MvnI	CGCG	3 cut(s)	282, 661, 1541
MwoI	GCNNNNNNNGC	6 cut(s)	257, 886, 1283, 1480, 1994, 2003
NciI	CCSGG	1 cut(s)	1307
NdeI	CATATG	1 cut(s)	225
NdeII	GATC	7 cut(s)	183, 415, 622, 823, 1803, 2094, 2148
NlaIV	GGNNCC	1 cut(s)	1911
NmeAIII	GCCGAG	1 cut(s)	1892
NmuCI	GTSAC	4 cut(s)	860, 1117, 1726, 2159
NsiI	ATGCAT	1 cut(s)	1196
NspI	RCATGY	2 cut(s)	264, 1948
PaeI	GCATGC	1 cut(s)	1948
PagI	TCATGA	2 cut(s)	1363, 1831
PauI	GCGCGC	1 cut(s)	1539
PciSI	GCTCTTC	1 cut(s)	1887
PctI	GAATGC	3 cut(s)	521, 1330, 1444
PdmI	GAANNNNTTC	2 cut(s)	567, 1685
PfeI	GAWTC	6 cut(s)	146, 406, 923, 1356, 1580, 2139
PflFI	GACNNNGTC	1 cut(s)	1724
PfoI	TCCNGGA	3 cut(s)	1305, 1319, 1912
PkrI	GCNGC	6 cut(s)	284, 287, 1393, 1396, 1965, 2089
PleI	GAGTC	2 cut(s)	625, 1936
PmaCI	CACGTG	1 cut(s)	829
PmlI	CACGTG	1 cut(s)	829
PpsI	GAGTC	2 cut(s)	625, 1936
Ppu21I	YACGTR	1 cut(s)	829
PshAI	GACNNNNGTC	1 cut(s)	616
PshBI	ATTAAT	1 cut(s)	1133
Psp124BI	GAGCTC	2 cut(s)	178, 685
Psp6I	CCWGG	4 cut(s)	884, 1319, 1912, 1921
PspCI	CACGTG	1 cut(s)	829
PspFI	CCCAGC	2 cut(s)	205, 1871
PspGI	CCWGG	4 cut(s)	884, 1319, 1912, 1921
PspN4I	GGNNCC	1 cut(s)	1911
PspPI	GGNCC	1 cut(s)	1919
PstI	CTGCAG	1 cut(s)	2092
PsyI	GACNNNGTC	1 cut(s)	1724
PteI	GCGCGC	1 cut(s)	1539
PvuII	CAGCTG	1 cut(s)	205
RsaI	GTAC	3 cut(s)	362, 962, 1556
RsaNI	GTAC	3 cut(s)	361, 961, 1555
RseI	CAYNNNNRTG	1 cut(s)	1971
SacI	GAGCTC	2 cut(s)	178, 685
SapI	GCTCTTC	1 cut(s)	1887
SatI	GCNGC	6 cut(s)	283, 286, 1392, 1395, 1964, 2088
Sau3AI	GATC	7 cut(s)	183, 415, 622, 823, 1803, 2094, 2148
Sau96I	GGNCC	1 cut(s)	1919
SchI	GAGTC	2 cut(s)	626, 1937
ScrFI	CCNGG	5 cut(s)	886, 1307, 1321, 1914, 1923
SduI	GDGCHC	3 cut(s)	178, 560, 685
SfaNI	GCATC	6 cut(s)	792, 1054, 1203, 1264, 1923, 2172
SfcI	CTRYAG	2 cut(s)	1224, 2088
SinI	GGWCC	1 cut(s)	1919
SmiMI	CAYNNNNRTG	1 cut(s)	1971
SmlI	CTYRAG	3 cut(s)	753, 1373, 1820
SmoI	CTYRAG	3 cut(s)	753, 1373, 1820
SphI	GCATGC	1 cut(s)	1948
SsiI	CCGC	5 cut(s)	282, 661, 1018, 1090, 1389
SspI	AATATT	1 cut(s)	946
SspMI	CTAG	2 cut(s)	840, 1724
SstI	GAGCTC	2 cut(s)	178, 685
StyD4I	CCNGG	5 cut(s)	884, 1305, 1319, 1912, 1921
TaaI	ACNGT	7 cut(s)	26, 365, 598, 1235, 1661, 1675, 2028
TaiI	ACGT	4 cut(s)	831, 1713, 2043, 2124
TaqI	TCGA	7 cut(s)	93, 182, 1052, 1634, 1806, 1931, 2151
TauI	GCSGC	1 cut(s)	285
TfiI	GAWTC	6 cut(s)	146, 406, 923, 1356, 1580, 2139
TscAI	CASTG	6 cut(s)	29, 148, 541, 786, 1002, 2170
TseFI	GTSAC	4 cut(s)	860, 1117, 1726, 2159
TseI	GCWGC	5 cut(s)	285, 1391, 1394, 1963, 2087
Tsp45I	GTSAC	4 cut(s)	860, 1117, 1726, 2159
TspGWI	ACGGA	1 cut(s)	169
TspRI	CASTG	6 cut(s)	29, 148, 541, 786, 1002, 2170
Tth111I	GACNNNGTC	1 cut(s)	1724
VpaK11BI	GGWCC	1 cut(s)	1919
VspI	ATTAAT	1 cut(s)	1133
XapI	RAATTY	5 cut(s)	160, 478, 891, 1179, 2266
XceI	RCATGY	2 cut(s)	264, 1948
XmiI	GTMKAC	2 cut(s)	1773, 1812
XmnI	GAANNNNTTC	2 cut(s)	567, 1685
XspI	CTAG	2 cut(s)	840, 1724
Zsp2I	ATGCAT	1 cut(s)	1196

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.