Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0003910

Physical Location & Seq

Genomic Coordinates Forward (+)

436756 .. 438971

Gene Structure 2216 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G003100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1968 bp

ATGATTATCCGCCAACTGAATTTCAAAACCCTCCAACGAATACCCAACCAACGGTATGCTAGCTGCTGTTATTACCATTCATTCAGACATGAGCACCAACCGTTCGACCAAAATCCCCAAACAAATGCAGCCTCAACTAACCACTCTATGCTCAACTACTTTCACAGAAACCTTCCACTTAGAGCCATTGACATGTTCAGTAAGCAACTTCAACTACATTTGTTTCATAACATCGATGAAGTTACCGTTACCCTTGCTGTCAAGGCCTGTCAAGGCCACCCCAAACCCGGATGCCAAATTCACAGGTTCACAGTTTCTTCTGGGTTTGCTTCGTATACTACGGTTTCAAATTCTATGATGAGTATGTACACTAAAGCTGGACAGTTTGATTTTTCTTGGAATACTATTCTTTCGGGGTTTCGAACAAGTGAGGGTGCATTGAATTTTGCTCTTAGGATGAATTTTAATGGAGTTATTTTTTATCCAGTGACTTGTACTACGGTTCTTGCTTTTTGTGCGGATCATGAAGATTTTCTATTTGGATTACAACTGCATTCTCTTATATTTAAGTCTGGTTTAGATGGTGAAGTTTTTGTTGGAAATGCAATTATAAGTATGTATTCGAGGTGGAGGCGGAGGCGGTTAATAGAAGCTAGGAAGGGAAACCATGGGCTTGAAGCGATTTTTGTCTTTATTCAGATGGTGAGAGAAGGGATGGGGTTTGATCATGTCTCATTTACTAGTGCAGTTTCAGCTTGCGGTCATGAAATGAATTTAGAACTTGGGAAACAGATACATGGCTTGACAATTAAATCAGGATATGGAAATGTTTCAGTTTGTAATGCATTGGTCTCGACATATTCAAAATGTGAGTTTACTGAAGATGCAACATTAGTCTTTCAGTGCATGAATGATCGCAACGTAGTGTCTTGGACGACTATGATTTCTATAGATGAAGAAGATGCCATCTCTCTATTTAATGAGATGAGATTGGATGGAGTATATCCAAATGATGTTACATTTACTGGATTTTTATCAAAACATAATGTTGGCAACAGCTTGATCACCATGTATGCTAAGTCTGAGTCCATGCATGACTCCATCAAAGTTTTTGAGGAGTTGAACTGCAGAGAAATCATATCATGGAATGCTTTGATTTCAGGTTATGCTCAGAACGGGCTTTGTCAGGATGCACTAAAAACATTCTTGGTAGCAACTATGGAGTCGAAGCCAAACAATTACACATTTGGTAGTGTCTTGAGTGCAATTGGTGATGCTCATGATATCTCTCTGAAATATGGCCAACGATGCCACTCGTCCTTGATCAAACTTGGATTAGTGACTGACCCAATTATCGCAGGTGCTCTTCTTGATATGTATGCAAAGCGAGGAAGCATTTGTGAGTCCAAAAGAGTTTTCAGTGAGACGCCTCATAAAAGGGTAAGACCTGATTCAGTCACATTTCTTTCTGTACTAACATCATGCAGCAGAAAGGGAATGGTGGAGATGGGCCGTCACCTCTTTCACTCAATGGTGAAAGACTATCATATTGAACCATCTCCTCAACATTATTCAAGTATGGTGGACATGTTGGGACGGGCAGGGAAATTGGAGGAAGCAAAGGAATTGATGAGTCGGATCCCGGGACAGCCAGGGTTTTCGTTGTTGCAAAGCCTGCTTGGGGCTTGCAGGATCCATGGGAATGTGGAGATGGCGGAGAGAGTGGCCGATACATTGATGAGATTGGAACCTACGGAATTGGGTTCTTTTGTGTTGATGTCCAACTTGTATGCTGAGAAAGGCGACTGGGAAATGGTGGCAAAGGTGAGGAAAGGGATGAGAGATAAAGGAGTGAGAAAGGAAGTGGGATATGGTTGGGTGGATACTGGTGATTCTGATGGTTCCTTGTATCTGCATGCGTTTTCATCAGGTGATACATCCCACCCACAGTTTGGGGGAGATATGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000960 GO:0000962 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010468 GO:0010604 GO:0016070 GO:0016787 GO:0016788 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031329 GO:0031331 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0045935 GO:0046483 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0061013 GO:0061014 GO:0065007 GO:0071704 GO:0080090 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363 GO:1903311 GO:1903313 GO:1905637 GO:1905639

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

656

Amino Acids

73.48

Weight (kDa)

6.97

Isoelectric Point (pI)

39.08

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003910)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G32430 AT4G32430
fragaria_vesca	FvH4_1g03430
malus_domestica	MD15G1174400.v1.1
prunus_persica	Prupe.5G003100_v2.0.a1 Prupe.7G240400_v2.0.a1 Prupe.7G241500_v2.0.a1 Prupe.7G241700_v2.0.a1 Prupe.8G249000_v2.0.a1
pyrus_communis	pycom15g15600
rosa_chinensis	RchiOBHm_Chr2g0088661 RchiOBHm_Chr5g0002171
rosa_laevigata	RLG00000015973 RLG00000015974 RLG00000031004
rosa_multiflora	Rmu_sc0006835.1_g000012 Rmu_sc0006835.1_g000013 Rmu_sc0013155.1_g000001 Rmu_sc0015442.1_g000012 Rmu_sc0015442.1_g000013 Rmu_sc0024326.1_g000001 Rmu_sc0041985.1_g000001
rosa_roxburghii	Rroxscaffold_2G00152420
rosa_rugosa	Rorug01G0485700
rosa_samantha	Rh2AG041200 Rh2BG039900 Rh2CG040700 Rh2DG040300 Rh5AG016800 Rh5AG016900 Rh5CG018300 Rh5CG018400 Rh5CG018500
rosa_wichuraiana	Rw2G003320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	611
AarI	CACCTGC	1 cut(s)	1349
Acc36I	ACCTGC	1 cut(s)	1349
AccB7I	CCANNNNNTGG	1 cut(s)	1952
AccI	GTMKAC	1 cut(s)	335
AciI	CCGC	6 cut(s)	10, 518, 634, 640, 759, 1715
AclWI	GGATC	5 cut(s)	528, 1633, 1646, 1687, 1700
AcoI	YGGCCR	2 cut(s)	1300, 1725
AcsI	RAATTY	6 cut(s)	19, 297, 349, 442, 460, 772
AcuI	CTGAAG	1 cut(s)	900
AcyI	GRCGYC	1 cut(s)	1427
AfaI	GTAC	3 cut(s)	368, 496, 1473
AfiI	CCNNNNNNNGG	4 cut(s)	51, 287, 1681, 1952
AflIII	ACRYGT	2 cut(s)	192, 1587
AgsI	TTSAA	9 cut(s)	25, 212, 348, 442, 677, 864, 1123, 1553, 1575
AhlI	ACTAGT	1 cut(s)	740
AjnI	CCWGG	1 cut(s)	1651
AjuI	GAANNNNNNNTTGG	4 cut(s)	579, 611, 1400, 1432
AluBI	AGCT	5 cut(s)	63, 377, 653, 755, 1059
AluI	AGCT	5 cut(s)	63, 377, 653, 755, 1059
Alw21I	GWGCWC	2 cut(s)	96, 1366
Alw26I	GTCTC	3 cut(s)	736, 856, 1418
AlwI	GGATC	5 cut(s)	528, 1633, 1646, 1687, 1700
Ama87I	CYCGRG	1 cut(s)	1642
AoxI	GGCC	5 cut(s)	264, 274, 1300, 1510, 1725
ApeKI	GCWGC	3 cut(s)	63, 128, 1485
ApoI	RAATTY	6 cut(s)	19, 297, 349, 442, 460, 772
Asp700I	GAANNNNTTC	2 cut(s)	531, 829
AspS9I	GGNCC	1 cut(s)	1510
AsuC2I	CCSGG	3 cut(s)	288, 1643, 1644
AsuHPI	GGTGA	9 cut(s)	596, 715, 1057, 1283, 1508, 1546, 1837, 1901, 1943
AsuII	TTCGAA	1 cut(s)	421
AsuNHI	GCTAGC	1 cut(s)	59
AvaI	CYCGRG	1 cut(s)	1642
BalI	TGGCCA	1 cut(s)	1302
BamHI	GGATCC	2 cut(s)	1638, 1692
Bbv12I	GWGCWC	2 cut(s)	96, 1366
BbvI	GCAGC	3 cut(s)	50, 140, 1497
BceAI	ACGGC	1 cut(s)	1497
BcgI	CGANNNNNNTGC	2 cut(s)	834, 868
BciT130I	CCWGG	1 cut(s)	1653
BciVI	GTATCC	1 cut(s)	1876
BclI	TGATCA	3 cut(s)	724, 1062, 1323
BcnI	CCSGG	3 cut(s)	288, 1643, 1644
BcoDI	GTCTC	3 cut(s)	736, 856, 1418
BcuI	ACTAGT	1 cut(s)	740
BfaI	CTAG	3 cut(s)	60, 654, 741
BfmI	CTRYAG	2 cut(s)	948, 1126
BfuAI	ACCTGC	1 cut(s)	1349
BfuI	GTATCC	1 cut(s)	1876
BisI	GCNGC	3 cut(s)	64, 129, 1486
BlsI	GCNGC	3 cut(s)	65, 130, 1487
Bme1390I	CCNGG	4 cut(s)	288, 1643, 1644, 1653
BmeT110I	CYCGRG	1 cut(s)	1642
BmgT120I	GGNCC	1 cut(s)	1510
BmiI	GGNNCC	4 cut(s)	1640, 1694, 1749, 1903
BmrFI	CCNGG	4 cut(s)	288, 1643, 1644, 1653
BmrI	ACTGGG	1 cut(s)	1816
BmsI	GCATC	6 cut(s)	281, 874, 952, 1180, 1264, 1298
BmtI	GCTAGC	1 cut(s)	63
BmuI	ACTGGG	1 cut(s)	1816
Bpu14I	TTCGAA	1 cut(s)	421
BpuEI	CTTGAG	1 cut(s)	1279
BpuMI	CCSGG	3 cut(s)	288, 1643, 1644
Bsa29I	ATCGAT	1 cut(s)	234
BsaBI	GATNNNNATC	1 cut(s)	1033
BsaHI	GRCGYC	1 cut(s)	1427
BsaI	GGTCTC	1 cut(s)	856
BsaJI	CCNNGG	4 cut(s)	667, 1642, 1652, 1696
Bsc4I	CCNNNNNNNGG	4 cut(s)	51, 287, 1681, 1952
Bse1I	ACTGG	4 cut(s)	485, 1030, 1811, 1891
Bse8I	GATNNNNATC	1 cut(s)	1033
BseBI	CCWGG	1 cut(s)	1653
BseCI	ATCGAT	1 cut(s)	234
BseDI	CCNNGG	4 cut(s)	667, 1642, 1652, 1696
BseGI	GGATG	7 cut(s)	296, 462, 720, 1000, 1195, 1842, 1937
BseJI	GATNNNNATC	1 cut(s)	1033
BseLI	CCNNNNNNNGG	4 cut(s)	51, 287, 1681, 1952
BseMII	CTCAG	3 cut(s)	1074, 1184, 1785
BseNI	ACTGG	4 cut(s)	485, 1030, 1811, 1891
BseRI	GAGGAG	2 cut(s)	1130, 1551
BseXI	GCAGC	3 cut(s)	50, 140, 1497
BsgI	GTGCAG	1 cut(s)	765
BshFI	GGCC	5 cut(s)	266, 276, 1302, 1512, 1727
BshVI	ATCGAT	1 cut(s)	234
BsiHKAI	GWGCWC	2 cut(s)	96, 1366
BsiHKCI	CYCGRG	1 cut(s)	1642
BsiSI	CCGG	2 cut(s)	288, 1643
BslFI	GGGAC	2 cut(s)	1608, 1659
BslI	CCNNNNNNNGG	4 cut(s)	51, 287, 1681, 1952
BsmAI	GTCTC	3 cut(s)	736, 856, 1418
BsmBI	CGTCTC	1 cut(s)	1418
BsmFI	GGGAC	2 cut(s)	1608, 1659
BsmI	GAATGC	2 cut(s)	553, 1153
BsnI	GGCC	5 cut(s)	266, 276, 1302, 1512, 1727
Bso31I	GGTCTC	1 cut(s)	856
BsoBI	CYCGRG	1 cut(s)	1642
Bsp119I	TTCGAA	1 cut(s)	421
Bsp1286I	GDGCHC	2 cut(s)	96, 1366
Bsp1407I	TGTACA	1 cut(s)	366
Bsp143I	GATC	7 cut(s)	520, 724, 913, 1062, 1323, 1638, 1692
Bsp19I	CCATGG	2 cut(s)	667, 1696
BspACI	CCGC	6 cut(s)	10, 518, 634, 640, 759, 1715
BspANI	GGCC	5 cut(s)	266, 276, 1302, 1512, 1727
BspCNI	CTCAG	3 cut(s)	1075, 1183, 1786
BspDI	ATCGAT	1 cut(s)	234
BspHI	TCATGA	3 cut(s)	523, 763, 1279
BspLI	GGNNCC	4 cut(s)	1640, 1694, 1749, 1903
BspMAI	CTGCAG	1 cut(s)	1130
BspMI	ACCTGC	1 cut(s)	1349
BspOI	GCTAGC	1 cut(s)	63
BspPI	GGATC	5 cut(s)	528, 1633, 1646, 1687, 1700
BspQI	GCTCTTC	1 cut(s)	1371
BspT104I	TTCGAA	1 cut(s)	421
BspTNI	GGTCTC	1 cut(s)	856
BsrGI	TGTACA	1 cut(s)	366
BsrI	ACTGG	4 cut(s)	485, 1030, 1811, 1891
BssECI	CCNNGG	4 cut(s)	667, 1642, 1652, 1696
BssMI	GATC	7 cut(s)	520, 724, 913, 1062, 1323, 1638, 1692
BssNAI	GTATAC	1 cut(s)	336
BssNI	GRCGYC	1 cut(s)	1427
BssT1I	CCWWGG	2 cut(s)	667, 1696
Bst1107I	GTATAC	1 cut(s)	336
Bst2UI	CCWGG	1 cut(s)	1653
Bst4CI	ACNGT	8 cut(s)	54, 102, 247, 313, 343, 384, 502, 1950
Bst6I	CTCTTC	1 cut(s)	1371
BstACI	GRCGYC	1 cut(s)	1427
BstAPI	GCANNNNNTGC	1 cut(s)	1675
BstAUI	TGTACA	1 cut(s)	366
BstBI	TTCGAA	1 cut(s)	421
BstC8I	GCNNGC	5 cut(s)	61, 757, 1676, 1687, 1917
BstDEI	CTNAG	6 cut(s)	179, 452, 1077, 1083, 1170, 1794
BstDSI	CCRYGG	2 cut(s)	667, 1696
BstF5I	GGATG	7 cut(s)	296, 462, 720, 1000, 1195, 1842, 1937
BstKTI	GATC	7 cut(s)	523, 727, 916, 1065, 1326, 1641, 1695
BstMAI	GTCTC	3 cut(s)	736, 856, 1418
BstMBI	GATC	7 cut(s)	520, 724, 913, 1062, 1323, 1638, 1692
BstMWI	GCNNNNNNNGC	5 cut(s)	263, 515, 752, 1308, 1675
BstNI	CCWGG	1 cut(s)	1653
BstNSI	RCATGY	3 cut(s)	196, 1591, 1919
BstSCI	CCNGG	4 cut(s)	286, 1641, 1642, 1651
BstSFI	CTRYAG	2 cut(s)	948, 1126
BstV1I	GCAGC	3 cut(s)	50, 140, 1497
BstX2I	RGATCY	2 cut(s)	1638, 1692
BstYI	RGATCY	2 cut(s)	1638, 1692
BstZ17I	GTATAC	1 cut(s)	336
Bsu15I	ATCGAT	1 cut(s)	234
BsuI	GTATCC	1 cut(s)	1876
BsuRI	GGCC	5 cut(s)	266, 276, 1302, 1512, 1727
BsuTUI	ATCGAT	1 cut(s)	234
BtgI	CCRYGG	2 cut(s)	667, 1696
BtsCI	GGATG	7 cut(s)	296, 462, 720, 1000, 1195, 1842, 1937
BtsIMutI	CAGTG	3 cut(s)	492, 908, 1426
BveI	ACCTGC	1 cut(s)	1349
Cac8I	GCNNGC	5 cut(s)	61, 757, 1676, 1687, 1917
CciI	TCATGA	3 cut(s)	523, 763, 1279
Cfr13I	GGNCC	1 cut(s)	1510
Cfr9I	CCCGGG	1 cut(s)	1642
ClaI	ATCGAT	1 cut(s)	234
CseI	GACGC	1 cut(s)	1435
Csp6I	GTAC	3 cut(s)	367, 495, 1472
CspCI	CAANNNNNGTGG	2 cut(s)	1563, 1598
CviQI	GTAC	3 cut(s)	367, 495, 1472
DdeI	CTNAG	6 cut(s)	179, 452, 1077, 1083, 1170, 1794
DpnI	GATC	7 cut(s)	522, 726, 915, 1064, 1325, 1640, 1694
DpnII	GATC	7 cut(s)	520, 724, 913, 1062, 1323, 1638, 1692
EaeI	YGGCCR	2 cut(s)	1300, 1725
Eam1104I	CTCTTC	1 cut(s)	1371
EarI	CTCTTC	1 cut(s)	1371
EciI	GGCGGA	2 cut(s)	649, 1730
Eco130I	CCWWGG	2 cut(s)	667, 1696
Eco147I	AGGCCT	1 cut(s)	266
Eco31I	GGTCTC	1 cut(s)	856
Eco32I	GATATC	1 cut(s)	1285
Eco57I	CTGAAG	1 cut(s)	900
Eco88I	CYCGRG	1 cut(s)	1642
EcoRII	CCWGG	1 cut(s)	1651
EcoRV	GATATC	1 cut(s)	1285
EcoT14I	CCWWGG	2 cut(s)	667, 1696
EcoT22I	ATGCAT	2 cut(s)	847, 1095
ErhI	CCWWGG	2 cut(s)	667, 1696
Esp3I	CGTCTC	1 cut(s)	1418
FaqI	GGGAC	2 cut(s)	1608, 1659
FbaI	TGATCA	3 cut(s)	724, 1062, 1323
FblI	GTMKAC	1 cut(s)	335
Fnu4HI	GCNGC	3 cut(s)	64, 129, 1486
FokI	GGATG	7 cut(s)	303, 469, 727, 1007, 1202, 1849, 1924
Fsp4HI	GCNGC	3 cut(s)	64, 129, 1486
FspBI	CTAG	3 cut(s)	60, 654, 741
GluI	GCNGC	3 cut(s)	64, 129, 1486
HaeIII	GGCC	5 cut(s)	266, 276, 1302, 1512, 1727
HapII	CCGG	2 cut(s)	288, 1643
HgaI	GACGC	1 cut(s)	1435
Hin1I	GRCGYC	1 cut(s)	1427
HinfI	GANTC	7 cut(s)	1085, 1097, 1223, 1403, 1451, 1633, 1892
HpaII	CCGG	2 cut(s)	288, 1643
HphI	GGTGA	9 cut(s)	596, 715, 1057, 1283, 1508, 1546, 1837, 1901, 1943
Hpy166II	GTNNAC	5 cut(s)	309, 336, 369, 876, 1585
Hpy188I	TCNGA	7 cut(s)	86, 699, 1084, 1173, 1293, 1638, 1897
Hpy188III	TCNNGA	8 cut(s)	524, 764, 816, 853, 1187, 1258, 1280, 1370
Hpy8I	GTNNAC	5 cut(s)	309, 336, 369, 876, 1585
HpyAV	CCTTC	3 cut(s)	182, 652, 704
HpyCH4III	ACNGT	8 cut(s)	54, 102, 247, 313, 343, 384, 502, 1950
HpyCH4IV	ACGT	1 cut(s)	921
HpyF10VI	GCNNNNNNNGC	5 cut(s)	263, 515, 752, 1308, 1675
HpyF3I	CTNAG	6 cut(s)	179, 452, 1077, 1083, 1170, 1794
HpySE526I	ACGT	1 cut(s)	921
Hsp92I	GRCGYC	1 cut(s)	1427
Ksp22I	TGATCA	3 cut(s)	724, 1062, 1323
Kzo9I	GATC	7 cut(s)	520, 724, 913, 1062, 1323, 1638, 1692
LguI	GCTCTTC	1 cut(s)	1371
Lsp1109I	GCAGC	3 cut(s)	50, 140, 1497
LweI	GCATC	6 cut(s)	281, 874, 952, 1180, 1264, 1298
MaeI	CTAG	3 cut(s)	60, 654, 741
MaeII	ACGT	1 cut(s)	921
MaeIII	GTNAC	7 cut(s)	241, 247, 487, 1015, 1339, 1456, 1514
MalI	GATC	7 cut(s)	522, 726, 915, 1064, 1325, 1640, 1694
MboI	GATC	7 cut(s)	520, 724, 913, 1062, 1323, 1638, 1692
MboII	GAAGA	6 cut(s)	309, 539, 893, 968, 971, 1358
MfeI	CAATTG	1 cut(s)	1266
MflI	RGATCY	2 cut(s)	1638, 1692
MhlI	GDGCHC	2 cut(s)	96, 1366
MlsI	TGGCCA	1 cut(s)	1302
MluNI	TGGCCA	1 cut(s)	1302
MlyI	GAGTC	5 cut(s)	1091, 1094, 1232, 1412, 1642
MmeI	TCCRAC	4 cut(s)	58, 577, 1616, 1806
Mox20I	TGGCCA	1 cut(s)	1302
Mph1103I	ATGCAT	2 cut(s)	847, 1095
MroXI	GAANNNNTTC	2 cut(s)	531, 829
MscI	TGGCCA	1 cut(s)	1302
MseI	TTAA	5 cut(s)	465, 567, 644, 810, 978
MslI	CAYNNNNRTG	2 cut(s)	191, 1701
Msp20I	TGGCCA	1 cut(s)	1302
MspI	CCGG	2 cut(s)	288, 1643
MspR9I	CCNGG	4 cut(s)	288, 1643, 1644, 1653
MunI	CAATTG	1 cut(s)	1266
Mva1269I	GAATGC	2 cut(s)	553, 1153
MvaI	CCWGG	1 cut(s)	1653
MwoI	GCNNNNNNNGC	5 cut(s)	263, 515, 752, 1308, 1675
NciI	CCSGG	3 cut(s)	288, 1643, 1644
NcoI	CCATGG	2 cut(s)	667, 1696
NdeII	GATC	7 cut(s)	520, 724, 913, 1062, 1323, 1638, 1692
NheI	GCTAGC	1 cut(s)	59
NlaIV	GGNNCC	4 cut(s)	1640, 1694, 1749, 1903
NmuCI	GTSAC	4 cut(s)	487, 1339, 1456, 1514
NsiI	ATGCAT	2 cut(s)	847, 1095
NspI	RCATGY	3 cut(s)	196, 1591, 1919
NspV	TTCGAA	1 cut(s)	421
PaeI	GCATGC	1 cut(s)	1919
PagI	TCATGA	3 cut(s)	523, 763, 1279
PaqCI	CACCTGC	1 cut(s)	1349
PceI	AGGCCT	1 cut(s)	266
PciI	ACATGT	2 cut(s)	192, 1587
PciSI	GCTCTTC	1 cut(s)	1371
PctI	GAATGC	2 cut(s)	553, 1153
PdmI	GAANNNNTTC	2 cut(s)	531, 829
PfeI	GAWTC	2 cut(s)	1451, 1892
PflMI	CCANNNNNTGG	1 cut(s)	1952
PkrI	GCNGC	3 cut(s)	65, 130, 1487
PleI	GAGTC	5 cut(s)	1091, 1093, 1231, 1411, 1641
PpsI	GAGTC	5 cut(s)	1091, 1093, 1231, 1411, 1641
PscI	ACATGT	2 cut(s)	192, 1587
PsiI	TTATAA	1 cut(s)	611
Psp6I	CCWGG	1 cut(s)	1651
PspGI	CCWGG	1 cut(s)	1651
PspN4I	GGNNCC	4 cut(s)	1640, 1694, 1749, 1903
PspPI	GGNCC	1 cut(s)	1510
PstI	CTGCAG	1 cut(s)	1130
PsuI	RGATCY	2 cut(s)	1638, 1692
RsaI	GTAC	3 cut(s)	368, 496, 1473
RsaNI	GTAC	3 cut(s)	367, 495, 1472
RseI	CAYNNNNRTG	2 cut(s)	191, 1701
SapI	GCTCTTC	1 cut(s)	1371
SaqAI	TTAA	5 cut(s)	465, 567, 644, 810, 978
SatI	GCNGC	3 cut(s)	64, 129, 1486
Sau3AI	GATC	7 cut(s)	520, 724, 913, 1062, 1323, 1638, 1692
Sau96I	GGNCC	1 cut(s)	1510
SchI	GAGTC	5 cut(s)	1091, 1094, 1232, 1412, 1642
ScrFI	CCNGG	4 cut(s)	288, 1643, 1644, 1653
SduI	GDGCHC	2 cut(s)	96, 1366
SfaNI	GCATC	6 cut(s)	281, 874, 952, 1180, 1264, 1298
SfcI	CTRYAG	2 cut(s)	948, 1126
SfuI	TTCGAA	1 cut(s)	421
SmaI	CCCGGG	1 cut(s)	1644
SmiMI	CAYNNNNRTG	2 cut(s)	191, 1701
SmlI	CTYRAG	1 cut(s)	1258
SmoI	CTYRAG	1 cut(s)	1258
SpeI	ACTAGT	1 cut(s)	740
SphI	GCATGC	1 cut(s)	1919
SseBI	AGGCCT	1 cut(s)	266
SsiI	CCGC	6 cut(s)	10, 518, 634, 640, 759, 1715
SspMI	CTAG	3 cut(s)	60, 654, 741
StuI	AGGCCT	1 cut(s)	266
StyD4I	CCNGG	4 cut(s)	286, 1641, 1642, 1651
StyI	CCWWGG	2 cut(s)	667, 1696
TaaI	ACNGT	8 cut(s)	54, 102, 247, 313, 343, 384, 502, 1950
TaiI	ACGT	1 cut(s)	924
TaqI	TCGA	6 cut(s)	105, 234, 421, 623, 854, 1226
TatI	WGTACW	3 cut(s)	366, 494, 1471
TfiI	GAWTC	2 cut(s)	1451, 1892
Tru1I	TTAA	5 cut(s)	465, 567, 644, 810, 978
Tru9I	TTAA	5 cut(s)	465, 567, 644, 810, 978
TscAI	CASTG	3 cut(s)	492, 908, 1426
TseFI	GTSAC	4 cut(s)	487, 1339, 1456, 1514
TseI	GCWGC	3 cut(s)	63, 128, 1485
Tsp45I	GTSAC	4 cut(s)	487, 1339, 1456, 1514
TspGWI	ACGGA	1 cut(s)	1769
TspMI	CCCGGG	1 cut(s)	1642
TspRI	CASTG	3 cut(s)	492, 908, 1426
Van91I	CCANNNNNTGG	1 cut(s)	1952
XapI	RAATTY	6 cut(s)	19, 297, 349, 442, 460, 772
XceI	RCATGY	3 cut(s)	196, 1591, 1919
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1949
XmaI	CCCGGG	1 cut(s)	1642
XmiI	GTMKAC	1 cut(s)	335
XmnI	GAANNNNTTC	2 cut(s)	531, 829
XspI	CTAG	3 cut(s)	60, 654, 741
Zsp2I	ATGCAT	2 cut(s)	847, 1095

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.