Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0003910

Physical Location & Seq

Genomic Coordinates Forward (+)

1895963 .. 1898338

Gene Structure 2376 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g03430.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2376 bp

ATGATTACCCGCCAATTGAATTTCAAAACCCTTCAACGAATACGCAAGCCCCGACTTACAACCTCTACAATCTGCTCAAAATTCCATTCTTATAACCATGAACACCACCTGTTCGACGAAATTCCCCAACCAGATGCTGCCGCAGTTAACCGCTCTATGCTCAACTATATGCACAGGAACCTTTCTGCTACTTCCCTCGACATTTTTACTAAGCAATTTCAACATTTTTCGTATCCTTGTAATATTGATGAAGTTACTGTTACCCTTGCTGTCAAGGCTTGCCAAGGAGACCCAAAACCCGGATGCCAAATCCACGGCTTTGCTGTTTCGTCTGGGTTTATTTCTTATGTTACGGTTTCTAATTCATTGATGAGTATGTACAATAAGGCTGGGAGGTTTGATAGTGCAATGTGTATCTTTGATGGTATGTGTTACACTGATATAGTTTCTTGGAACACTGTTCTTTCGGGGTTTCGGACGAGTGAGGGGGCATTGAGTTTTGCTTGCAGGATGCATTCGAATGGGATTGCTTTGGATCCGGTGACTTATTGTACAGTTCTTGCGTTTTGTGGGGAGTATGAGGATTTTCTCTTTGGATTGCAACTGCATTCTCTCGTGTTTAAGTCTGGGTTGGATTGTGAAGTTTTTGTTGGGAATGCTCTTATAAGTATGTATTCAAGGTGGAGACGTTTGAGAGAAGCTAGGAATGTGTTTGATGAAATGCGGAAGAGGGATGTGGTTTCATGGAATGCAATTCTATCAGGTTACTCTCAAGAGAGAAATCATGGCCTTGAGGCAATTATACTGTTCATTGAAATGGTGAGAGAAGGGATGAAACTAGATCATGTCTCATTTACTAGTGCTGTTTCAGCTTGTGGTCATGAGAAGAACTTAAGACTCGGGAGACAGATACATGGCTTGACAGTAAAATCAGGATATGAAAGTCATGTTTCAGTTGGGAACGTGTTGATCTCCACATATTCAAAGAGTGGTGTCAATGAAGATGCAGGATTGGTGTTTCAGCACCTGAAAAACCGCAATGTAATTTCCTGGACTACAATGATTTCTATGGACGAAGAGAATGCCATCTCTTTATTTAACAAGATGAGGTTGGATGGAGTATATCCAAATGAAGTTACATTTGTTGGACTAATCCATGCAATATCAAACAGAAAGTTGGTGGAAGAAGGCCTTATGATTCATGGGTTTTGCAGAAAGACTGGATTTTTGTCGAAGCATAATGTCTGCAATAGCTTTATCACCATGTATGCTCAGTTTGAGTCCATGGATGATTCTTTCAAGGTTTTTGAGGAGTTGGACTTCAGAGAAATCATTTCATGGAATGCTCTGATCTCAGGCTATGCTCAGAACAAGCTGTGTCAGGATGCACTGAGGACATTCTTGTCAGCAATTATGGAGTCCACGCCCAACAACTACACATTTGGTAGTGTGTTGAGCGCAATTGGTGATGCTCATGACATTTCTCTGAAGTATGGCCAGCGCTGCCACTCCTTTTTGATAAAACTTGGATCAGTTACTGACCCGATTACAGCAGGTGCGCTCCTTGATATGTATGCAAAGCGAGGAAGCATTTGTGAGTCGCAAAGAGTTTTCAGTGAGACCCCTCACAGAACTCAGTTTGCTTGGACAGCAATAATATCTGCATATGCTGGCCATGGAGACTATGACTCGGTGGTCGAATTGTTCTACCAGATGGATAAAGAAGGGGTGAAACCTGACTCGATCACATTTCTTTCCGTACTAAGCGCATGTAGTAGAAAGGGATCAGTTGAGATGGGCCGCCATTTCTTTGAATCAATGGTTAAAGACTATCAGATAGTACCATCTCCTCAACATTATGCTTCTATGGTGGATATGTTGGGACGAGCTGGGAAGCTGGAGGAAGCAGAGGAACTGATGAGTCAGATGTCTGGACAGCCGAGTTTTTCTTTGTTGCAAAGCTTGCTCGGGGCTTGCACAATACATGGGAATGTGGAGATGGCTGAGAGAGTAGCAGGCGCTTTAATGCGAATGGAGCCAACTGAATCAGGTTCTTATGTGTTGCTGTCCAACTTGTATGCAGAGAAAGGGGACTGGGAAATGGTGGCAAAAATAAGAAGACAGATGAGAGATAGGGGAGTGAGAAAGGAAGTGGGATATAGTTGGTTGGACAATGGTGATGCTGATGGCTCTTTGTATCTCCACGGGTTTTCGTCAGGTGATAAATCTCACTGCCGGTCTGAAGAGATATGTAGAATGGCAAAGTTCCTAGGATTAGAAATGAAGTTTTTGAGAGAGAACATGTCTGATATAGACTCTGTGAAACAAAACAGTGAGACACATTCTGAAGTCCCTCGTGATGAAGGCTTGTATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000960 GO:0000962 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010468 GO:0010604 GO:0016070 GO:0016787 GO:0016788 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031329 GO:0031331 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0045935 GO:0046483 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0061013 GO:0061014 GO:0065007 GO:0071704 GO:0080090 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363 GO:1903311 GO:1903313 GO:1905637 GO:1905639

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

792

Amino Acids

89.03

Weight (kDa)

6.23

Isoelectric Point (pI)

40.22

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	244 - 292	1.2e-08	PPR repeat family
PPR_2	PF13041	546 - 592	4e-10	PPR repeat family
E_motif	PF20431	662 - 723	1.7e-17	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003910)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G32430 AT4G32430
fragaria_vesca	FvH4_1g03430
malus_domestica	MD15G1174400.v1.1
prunus_persica	Prupe.5G003100_v2.0.a1 Prupe.7G240400_v2.0.a1 Prupe.7G241500_v2.0.a1 Prupe.7G241700_v2.0.a1 Prupe.8G249000_v2.0.a1
pyrus_communis	pycom15g15600
rosa_chinensis	RchiOBHm_Chr2g0088661 RchiOBHm_Chr5g0002171
rosa_laevigata	RLG00000015973 RLG00000015974 RLG00000031004
rosa_multiflora	Rmu_sc0006835.1_g000012 Rmu_sc0006835.1_g000013 Rmu_sc0013155.1_g000001 Rmu_sc0015442.1_g000012 Rmu_sc0015442.1_g000013 Rmu_sc0024326.1_g000001 Rmu_sc0041985.1_g000001
rosa_roxburghii	Rroxscaffold_2G00152420
rosa_rugosa	Rorug01G0485700
rosa_samantha	Rh2AG041200 Rh2BG039900 Rh2CG040700 Rh2DG040300 Rh5AG016800 Rh5AG016900 Rh5CG018300 Rh5CG018400 Rh5CG018500
rosa_wichuraiana	Rw2G003320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	93, 665
AarI	CACCTGC	1 cut(s)	1544
AasI	GACNNNNNNGTC	2 cut(s)	1402, 1694
Acc36I	ACCTGC	1 cut(s)	1544
AccBSI	CCGCTC	1 cut(s)	153
AciI	CCGC	6 cut(s)	10, 141, 151, 724, 1036, 1801
AclWI	GGATC	4 cut(s)	530, 543, 1537, 1792
AcoI	YGGCCR	2 cut(s)	1495, 1672
AcsI	RAATTY	3 cut(s)	19, 80, 120
AcuI	CTGAAG	4 cut(s)	1306, 1508, 2262, 2367
AfaI	GTAC	4 cut(s)	380, 553, 1761, 1842
AfeI	AGCGCT	1 cut(s)	1502
AfiI	CCNNNNNNNGG	1 cut(s)	299
AflII	CTTAAG	1 cut(s)	892
AflIII	ACRYGT	2 cut(s)	963, 2301
AgsI	TTSAA	9 cut(s)	19, 25, 35, 221, 678, 815, 984, 1300, 1814
AhlI	ACTAGT	1 cut(s)	857
AjnI	CCWGG	1 cut(s)	1049
AjuI	GAANNNNNNNTTGG	2 cut(s)	633, 665
AluBI	AGCT	7 cut(s)	701, 872, 1254, 1375, 1889, 1897, 1962
AluI	AGCT	7 cut(s)	701, 872, 1254, 1375, 1889, 1897, 1962
Alw26I	GTCTC	7 cut(s)	282, 679, 853, 898, 1613, 1674, 2330
AlwI	GGATC	4 cut(s)	530, 543, 1537, 1792
AlwNI	CAGNNNCTG	3 cut(s)	137, 1027, 1538
Ama87I	CYCGRG	2 cut(s)	899, 1967
Aor51HI	AGCGCT	1 cut(s)	1502
AoxI	GGCC	5 cut(s)	787, 1189, 1495, 1672, 1798
ApeKI	GCWGC	2 cut(s)	137, 1503
ApoI	RAATTY	3 cut(s)	19, 80, 120
ArsI	GACNNNNNNTTYG	2 cut(s)	1210, 1242
AspA2I	CCTAGG	1 cut(s)	2269
AspLEI	GCGC	5 cut(s)	1460, 1503, 1561, 1769, 2021
AspS9I	GGNCC	1 cut(s)	1798
AsuC2I	CCSGG	1 cut(s)	300
AsuHPI	GGTGA	7 cut(s)	553, 832, 1252, 1478, 1741, 2189, 2231
AsuII	TTCGAA	1 cut(s)	518
AvaI	CYCGRG	2 cut(s)	899, 1967
AvrII	CCTAGG	1 cut(s)	2269
BalI	TGGCCA	2 cut(s)	1497, 1674
BamHI	GGATCC	1 cut(s)	535
BauI	CACGAG	2 cut(s)	614, 2355
BbsI	GAAGAC	1 cut(s)	2125
BbvI	GCAGC	2 cut(s)	124, 1490
BccI	CCATC	8 cut(s)	416, 1094, 1109, 1708, 1789, 1852, 1993, 2180
BceAI	ACGGC	1 cut(s)	331
BcgI	CGANNNNNNTGC	2 cut(s)	1064, 1098
BciT130I	CCWGG	1 cut(s)	1051
BciVI	GTATCC	1 cut(s)	243
BcnI	CCSGG	1 cut(s)	300
BcoDI	GTCTC	7 cut(s)	282, 679, 853, 898, 1613, 1674, 2330
BcuI	ACTAGT	1 cut(s)	857
BfaI	CTAG	4 cut(s)	702, 839, 858, 2270
BfoI	RGCGCY	2 cut(s)	1504, 2022
BfrI	CTTAAG	1 cut(s)	892
BfuAI	ACCTGC	1 cut(s)	1544
BfuI	GTATCC	1 cut(s)	243
BisI	GCNGC	4 cut(s)	138, 141, 1504, 1801
BlnI	CCTAGG	1 cut(s)	2269
BlsI	GCNGC	4 cut(s)	139, 142, 1505, 1802
Bme1390I	CCNGG	2 cut(s)	300, 1051
BmeT110I	CYCGRG	2 cut(s)	899, 1967
BmgT120I	GGNCC	1 cut(s)	1798
BmiI	GGNNCC	3 cut(s)	179, 537, 2037
BmrFI	CCNGG	2 cut(s)	300, 1051
BmrI	ACTGGG	1 cut(s)	2104
BmsI	GCATC	7 cut(s)	124, 293, 501, 994, 1375, 1459, 2170
BmuI	ACTGGG	1 cut(s)	2104
BpiI	GAAGAC	1 cut(s)	2125
BpmI	CTGGAG	1 cut(s)	1919
Bpu14I	TTCGAA	1 cut(s)	518
BpuEI	CTTGAG	2 cut(s)	756, 812
BpuMI	CCSGG	1 cut(s)	300
BsaI	GGTCTC	2 cut(s)	282, 1613
BsaJI	CCNNGG	6 cut(s)	283, 313, 1284, 1675, 2203, 2269
BsaWI	WCCGGW	1 cut(s)	538
Bsc4I	CCNNNNNNNGG	1 cut(s)	299
Bse118I	RCCGGY	1 cut(s)	2235
Bse1I	ACTGG	2 cut(s)	1225, 2099
Bse3DI	GCAATG	2 cut(s)	414, 1045
BseBI	CCWGG	1 cut(s)	1051
BseDI	CCNNGG	6 cut(s)	283, 313, 1284, 1675, 2203, 2269
BseGI	GGATG	7 cut(s)	308, 516, 739, 837, 1120, 1294, 1390
BseLI	CCNNNNNNNGG	1 cut(s)	299
BseMI	GCAATG	2 cut(s)	414, 1045
BseMII	CTCAG	6 cut(s)	1286, 1368, 1379, 1382, 1649, 1995
BseNI	ACTGG	2 cut(s)	1225, 2099
BseRI	GAGGAG	2 cut(s)	1325, 1839
BseXI	GCAGC	2 cut(s)	124, 1490
BseYI	CCCAGC	2 cut(s)	389, 1889
BshFI	GGCC	5 cut(s)	789, 1191, 1497, 1674, 1800
BsiHKCI	CYCGRG	2 cut(s)	899, 1967
BsiSI	CCGG	3 cut(s)	300, 539, 2236
BslFI	GGGAC	3 cut(s)	1896, 2105, 2336
BslI	CCNNNNNNNGG	1 cut(s)	299
BsmAI	GTCTC	7 cut(s)	282, 679, 853, 898, 1613, 1674, 2330
BsmBI	CGTCTC	1 cut(s)	679
BsmFI	GGGAC	3 cut(s)	1896, 2105, 2336
BsmI	GAATGC	6 cut(s)	514, 607, 661, 754, 1087, 1348
BsnI	GGCC	5 cut(s)	789, 1191, 1497, 1674, 1800
Bso31I	GGTCTC	2 cut(s)	282, 1613
BsoBI	CYCGRG	2 cut(s)	899, 1967
Bsp119I	TTCGAA	1 cut(s)	518
Bsp1407I	TGTACA	2 cut(s)	378, 551
Bsp143I	GATC	7 cut(s)	535, 841, 969, 1350, 1529, 1743, 1784
Bsp19I	CCATGG	2 cut(s)	1284, 1675
BspACI	CCGC	6 cut(s)	10, 141, 151, 724, 1036, 1801
BspANI	GGCC	5 cut(s)	789, 1191, 1497, 1674, 1800
BspCNI	CTCAG	6 cut(s)	1285, 1367, 1378, 1383, 1648, 1996
BspHI	TCATGA	2 cut(s)	880, 1474
BspLI	GGNNCC	3 cut(s)	179, 537, 2037
BspMI	ACCTGC	1 cut(s)	1544
BspPI	GGATC	4 cut(s)	530, 543, 1537, 1792
BspT104I	TTCGAA	1 cut(s)	518
BspTI	CTTAAG	1 cut(s)	892
BspTNI	GGTCTC	2 cut(s)	282, 1613
BsrBI	CCGCTC	1 cut(s)	153
BsrDI	GCAATG	2 cut(s)	414, 1045
BsrFI	RCCGGY	1 cut(s)	2235
BsrGI	TGTACA	2 cut(s)	378, 551
BsrI	ACTGG	2 cut(s)	1225, 2099
BssAI	RCCGGY	1 cut(s)	2235
BssECI	CCNNGG	6 cut(s)	283, 313, 1284, 1675, 2203, 2269
BssMI	GATC	7 cut(s)	535, 841, 969, 1350, 1529, 1743, 1784
BssSI	CACGAG	2 cut(s)	614, 2355
BssT1I	CCWWGG	4 cut(s)	283, 1284, 1675, 2269
Bst2BI	CACGAG	2 cut(s)	614, 2355
Bst2UI	CCWGG	1 cut(s)	1051
Bst4CI	ACNGT	7 cut(s)	259, 355, 460, 556, 807, 925, 2333
Bst6I	CTCTTC	3 cut(s)	722, 1071, 2238
BstAFI	CTTAAG	1 cut(s)	892
BstAPI	GCANNNNNTGC	1 cut(s)	1963
BstAUI	TGTACA	2 cut(s)	378, 551
BstBI	TTCGAA	1 cut(s)	518
BstC8I	GCNNGC	8 cut(s)	47, 280, 505, 1499, 1672, 1964, 1975, 2017
BstDEI	CTNAG	8 cut(s)	210, 1272, 1354, 1365, 1391, 1635, 1763, 2004
BstDSI	CCRYGG	4 cut(s)	313, 1284, 1675, 2203
BstF5I	GGATG	7 cut(s)	308, 516, 739, 837, 1120, 1294, 1390
BstH2I	RGCGCY	2 cut(s)	1504, 2022
BstHHI	GCGC	5 cut(s)	1460, 1503, 1561, 1769, 2021
BstKTI	GATC	7 cut(s)	538, 844, 972, 1353, 1532, 1746, 1787
BstMAI	GTCTC	7 cut(s)	282, 679, 853, 898, 1613, 1674, 2330
BstMBI	GATC	7 cut(s)	535, 841, 969, 1350, 1529, 1743, 1784
BstMWI	GCNNNNNNNGC	6 cut(s)	275, 869, 1503, 1649, 1963, 2035
BstNI	CCWGG	1 cut(s)	1051
BstNSI	RCATGY	2 cut(s)	1773, 2305
BstSCI	CCNGG	2 cut(s)	298, 1049
BstV1I	GCAGC	2 cut(s)	124, 1490
BstV2I	GAAGAC	1 cut(s)	2125
BstX2I	RGATCY	1 cut(s)	535
BstYI	RGATCY	1 cut(s)	535
BsuI	GTATCC	1 cut(s)	243
BsuRI	GGCC	5 cut(s)	789, 1191, 1497, 1674, 1800
BtgI	CCRYGG	4 cut(s)	313, 1284, 1675, 2203
BtsCI	GGATG	7 cut(s)	308, 516, 739, 837, 1120, 1294, 1390
BtsI	GCAGTG	1 cut(s)	2230
BtsIMutI	CAGTG	6 cut(s)	435, 456, 1388, 1621, 2230, 2338
BveI	ACCTGC	1 cut(s)	1544
Cac8I	GCNNGC	8 cut(s)	47, 280, 505, 1499, 1672, 1964, 1975, 2017
CaiI	CAGNNNCTG	3 cut(s)	137, 1027, 1538
CciI	TCATGA	2 cut(s)	880, 1474
CfoI	GCGC	5 cut(s)	1460, 1503, 1561, 1769, 2021
Cfr10I	RCCGGY	1 cut(s)	2235
Cfr13I	GGNCC	1 cut(s)	1798
Csp6I	GTAC	4 cut(s)	379, 552, 1760, 1841
CviQI	GTAC	4 cut(s)	379, 552, 1760, 1841
DdeI	CTNAG	8 cut(s)	210, 1272, 1354, 1365, 1391, 1635, 1763, 2004
DpnI	GATC	7 cut(s)	537, 843, 971, 1352, 1531, 1745, 1786
DpnII	GATC	7 cut(s)	535, 841, 969, 1350, 1529, 1743, 1784
DrdI	GACNNNNNNGTC	2 cut(s)	1402, 1694
DseDI	GACNNNNNNGTC	2 cut(s)	1402, 1694
EaeI	YGGCCR	2 cut(s)	1495, 1672
Eam1104I	CTCTTC	3 cut(s)	722, 1071, 2238
EarI	CTCTTC	3 cut(s)	722, 1071, 2238
Eco130I	CCWWGG	4 cut(s)	283, 1284, 1675, 2269
Eco147I	AGGCCT	1 cut(s)	1191
Eco31I	GGTCTC	2 cut(s)	282, 1613
Eco47III	AGCGCT	1 cut(s)	1502
Eco57I	CTGAAG	4 cut(s)	1306, 1508, 2262, 2367
Eco88I	CYCGRG	2 cut(s)	899, 1967
EcoRII	CCWGG	1 cut(s)	1049
EcoT14I	CCWWGG	4 cut(s)	283, 1284, 1675, 2269
EcoT22I	ATGCAT	1 cut(s)	516
ErhI	CCWWGG	4 cut(s)	283, 1284, 1675, 2269
Esp3I	CGTCTC	1 cut(s)	679
FalI	AAGNNNNNCTT	2 cut(s)	1176, 1208
FaqI	GGGAC	3 cut(s)	1896, 2105, 2336
FauI	CCCGC	1 cut(s)	17
FauNDI	CATATG	1 cut(s)	1666
Fnu4HI	GCNGC	4 cut(s)	138, 141, 1504, 1801
FokI	GGATG	7 cut(s)	315, 523, 746, 844, 1127, 1301, 1397
Fsp4HI	GCNGC	4 cut(s)	138, 141, 1504, 1801
FspBI	CTAG	4 cut(s)	702, 839, 858, 2270
GlaI	GCGC	5 cut(s)	1459, 1502, 1560, 1768, 2020
GluI	GCNGC	4 cut(s)	138, 141, 1504, 1801
GsaI	CCCAGC	2 cut(s)	393, 1893
GsuI	CTGGAG	1 cut(s)	1919
HaeII	RGCGCY	2 cut(s)	1504, 2022
HaeIII	GGCC	5 cut(s)	789, 1191, 1497, 1674, 1800
HapII	CCGG	3 cut(s)	300, 539, 2236
HhaI	GCGC	5 cut(s)	1460, 1503, 1561, 1769, 2021
Hin6I	GCGC	5 cut(s)	1458, 1501, 1559, 1767, 2019
HinP1I	GCGC	5 cut(s)	1458, 1501, 1559, 1767, 2019
HincII	GTYRAC	1 cut(s)	148
HindII	GTYRAC	1 cut(s)	148
HindIII	AAGCTT	1 cut(s)	1960
HpaI	GTTAAC	1 cut(s)	148
HpaII	CCGG	3 cut(s)	300, 539, 2236
HphI	GGTGA	7 cut(s)	553, 832, 1252, 1478, 1741, 2189, 2231
Hpy166II	GTNNAC	2 cut(s)	148, 1422
Hpy188III	TCNNGA	8 cut(s)	773, 881, 901, 933, 1382, 1475, 1932, 2357
Hpy8I	GTNNAC	2 cut(s)	148, 1422
Hpy99I	CGWCG	1 cut(s)	119
HpyAV	CCTTC	5 cut(s)	41, 821, 1181, 1718, 2357
HpyCH4III	ACNGT	7 cut(s)	259, 355, 460, 556, 807, 925, 2333
HpyCH4IV	ACGT	2 cut(s)	688, 963
HpyF10VI	GCNNNNNNNGC	6 cut(s)	275, 869, 1503, 1649, 1963, 2035
HpyF3I	CTNAG	8 cut(s)	210, 1272, 1354, 1365, 1391, 1635, 1763, 2004
HpySE526I	ACGT	2 cut(s)	688, 963
HspAI	GCGC	5 cut(s)	1458, 1501, 1559, 1767, 2019
KspAI	GTTAAC	1 cut(s)	148
Kzo9I	GATC	7 cut(s)	535, 841, 969, 1350, 1529, 1743, 1784
LmnI	GCTCC	2 cut(s)	1566, 2035
Lsp1109I	GCAGC	2 cut(s)	124, 1490
LweI	GCATC	7 cut(s)	124, 293, 501, 994, 1375, 1459, 2170
MaeI	CTAG	4 cut(s)	702, 839, 858, 2270
MaeII	ACGT	2 cut(s)	688, 963
MaeIII	GTNAC	8 cut(s)	253, 259, 349, 431, 541, 764, 1135, 1534
MalI	GATC	7 cut(s)	537, 843, 971, 1352, 1531, 1745, 1786
MbiI	CCGCTC	1 cut(s)	153
MboI	GATC	7 cut(s)	535, 841, 969, 1350, 1529, 1743, 1784
MboII	GAAGA	7 cut(s)	739, 898, 1013, 1088, 1196, 2130, 2255
MfeI	CAATTG	2 cut(s)	14, 1461
MflI	RGATCY	1 cut(s)	535
MlsI	TGGCCA	2 cut(s)	1497, 1674
MluNI	TGGCCA	2 cut(s)	1497, 1674
MlyI	GAGTC	8 cut(s)	891, 1289, 1427, 1607, 1682, 1733, 1930, 2309
MmeI	TCCRAC	6 cut(s)	612, 1092, 1126, 1296, 2094, 2148
Mox20I	TGGCCA	2 cut(s)	1497, 1674
Mph1103I	ATGCAT	1 cut(s)	516
MscI	TGGCCA	2 cut(s)	1497, 1674
MseI	TTAA	6 cut(s)	147, 621, 893, 1098, 1824, 2024
MslI	CAYNNNNRTG	3 cut(s)	519, 815, 1989
Msp20I	TGGCCA	2 cut(s)	1497, 1674
MspCI	CTTAAG	1 cut(s)	892
MspI	CCGG	3 cut(s)	300, 539, 2236
MspR9I	CCNGG	2 cut(s)	300, 1051
MunI	CAATTG	2 cut(s)	14, 1461
Mva1269I	GAATGC	6 cut(s)	514, 607, 661, 754, 1087, 1348
MvaI	CCWGG	1 cut(s)	1051
MwoI	GCNNNNNNNGC	6 cut(s)	275, 869, 1503, 1649, 1963, 2035
NciI	CCSGG	1 cut(s)	300
NcoI	CCATGG	2 cut(s)	1284, 1675
NdeI	CATATG	1 cut(s)	1666
NdeII	GATC	7 cut(s)	535, 841, 969, 1350, 1529, 1743, 1784
NlaIV	GGNNCC	3 cut(s)	179, 537, 2037
NmeAIII	GCCGAG	1 cut(s)	1965
NmuCI	GTSAC	1 cut(s)	541
NsiI	ATGCAT	1 cut(s)	516
NspI	RCATGY	2 cut(s)	1773, 2305
NspV	TTCGAA	1 cut(s)	518
PagI	TCATGA	2 cut(s)	880, 1474
PaqCI	CACCTGC	1 cut(s)	1544
PceI	AGGCCT	1 cut(s)	1191
PciI	ACATGT	1 cut(s)	2301
PcsI	WCGNNNNNNNCGW	1 cut(s)	49
PctI	GAATGC	6 cut(s)	514, 607, 661, 754, 1087, 1348
PfeI	GAWTC	4 cut(s)	1198, 1292, 1814, 2045
PfoI	TCCNGGA	1 cut(s)	1049
PkrI	GCNGC	4 cut(s)	139, 142, 1505, 1802
PleI	GAGTC	8 cut(s)	891, 1288, 1426, 1606, 1682, 1733, 1929, 2309
PpsI	GAGTC	8 cut(s)	891, 1288, 1426, 1606, 1682, 1733, 1929, 2309
PscI	ACATGT	1 cut(s)	2301
PsiI	TTATAA	2 cut(s)	93, 665
Psp6I	CCWGG	1 cut(s)	1049
PspFI	CCCAGC	2 cut(s)	389, 1889
PspGI	CCWGG	1 cut(s)	1049
PspN4I	GGNNCC	3 cut(s)	179, 537, 2037
PspPI	GGNCC	1 cut(s)	1798
PstNI	CAGNNNCTG	3 cut(s)	137, 1027, 1538
PsuI	RGATCY	1 cut(s)	535
RsaI	GTAC	4 cut(s)	380, 553, 1761, 1842
RsaNI	GTAC	4 cut(s)	379, 552, 1760, 1841
RseI	CAYNNNNRTG	3 cut(s)	519, 815, 1989
SaqAI	TTAA	6 cut(s)	147, 621, 893, 1098, 1824, 2024
SatI	GCNGC	4 cut(s)	138, 141, 1504, 1801
Sau3AI	GATC	7 cut(s)	535, 841, 969, 1350, 1529, 1743, 1784
Sau96I	GGNCC	1 cut(s)	1798
SchI	GAGTC	8 cut(s)	891, 1289, 1427, 1607, 1682, 1733, 1930, 2309
ScrFI	CCNGG	2 cut(s)	300, 1051
SfaNI	GCATC	7 cut(s)	124, 293, 501, 994, 1375, 1459, 2170
SfuI	TTCGAA	1 cut(s)	518
SmiMI	CAYNNNNRTG	3 cut(s)	519, 815, 1989
SmlI	CTYRAG	3 cut(s)	771, 791, 892
SmoI	CTYRAG	3 cut(s)	771, 791, 892
SpeI	ACTAGT	1 cut(s)	857
SseBI	AGGCCT	1 cut(s)	1191
SsiI	CCGC	6 cut(s)	10, 141, 151, 724, 1036, 1801
SspI	AATATT	1 cut(s)	244
SspMI	CTAG	4 cut(s)	702, 839, 858, 2270
StuI	AGGCCT	1 cut(s)	1191
StyD4I	CCNGG	2 cut(s)	298, 1049
StyI	CCWWGG	4 cut(s)	283, 1284, 1675, 2269
TaaI	ACNGT	7 cut(s)	259, 355, 460, 556, 807, 925, 2333
TaiI	ACGT	2 cut(s)	691, 966
TaqI	TCGA	6 cut(s)	114, 198, 518, 1232, 1698, 1742
TatI	WGTACW	2 cut(s)	378, 551
TauI	GCSGC	2 cut(s)	143, 1803
TfiI	GAWTC	4 cut(s)	1198, 1292, 1814, 2045
Tru1I	TTAA	6 cut(s)	147, 621, 893, 1098, 1824, 2024
Tru9I	TTAA	6 cut(s)	147, 621, 893, 1098, 1824, 2024
TscAI	CASTG	6 cut(s)	442, 463, 1395, 1621, 2237, 2338
TseFI	GTSAC	1 cut(s)	541
TseI	GCWGC	2 cut(s)	137, 1503
Tsp45I	GTSAC	1 cut(s)	541
TspGWI	ACGGA	1 cut(s)	1747
TspRI	CASTG	6 cut(s)	442, 463, 1395, 1621, 2237, 2338
Vha464I	CTTAAG	1 cut(s)	892
XapI	RAATTY	3 cut(s)	19, 80, 120
XceI	RCATGY	2 cut(s)	1773, 2305
XmaJI	CCTAGG	1 cut(s)	2269
XspI	CTAG	4 cut(s)	702, 839, 858, 2270
Zsp2I	ATGCAT	1 cut(s)	516

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.