Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0003910

Physical Location & Seq

Genomic Coordinates Forward (+)

1312618 .. 1314810

Gene Structure 2193 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000031004

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2094 bp

ATGAAATTCCCCAACCAGATGCTGCCGCAGTTAACCGCTCTATGCTCAACTATATGCAAGGAACCTTTCAGCTACGGCCCTCCAAATATTAGTAAACAAATTCAACTATGTTCGTCTCCTCGGAACAGCTTGCCAAGGGGACCCGAAAGTCCGAAACCCGGATGCCAAATCCACGGGTTTGCAGTTTCTTGTGGGTTTATTTCCTATGTTACAGTTTCGAATTCGTTGATGAGTATGTACACTAAAGCTGGGAGGTTTGATAGTGCAATGTGTATTTTTGATGGTATGTGTTATACTGATATAGTTTCTTGGAATACTATTCTTTCGGGGTTTCAAACGAGTGAGGGGGTGTTGAGTTTTGCTCCGGTGACTTATTGTACAGTTCTTGCTTTTTGTGCGGAGTATGAAGATTTTCTGTTTGGGTTACAATTGCATTCTCTCATACTTAAGTCTGGGTTGGATGGTGAAGTTTTTGTTGGGAATGCGCTTATAAGTATGTATTCAAGGTGGAGACGTTTGATAGAAGCTAGGAATGTGTTTGATGAAATGCGGATTAAGGATGTGGTTTCTTGGAATGCAACACTATCAGGTTACTCTCAAGAGGGAAATCATGGGCTTGAAGCAGTTTTACTCTTCATTGCAATGGTGAGAAAAGGGATGAAACTTGAAACTAGTGCAGTTTCAGCTTGCGGGCATGAGAAGAATTTAAGACTTGGGAGACAGATACATGGCTTGACACTCATGAACGATCGCAATGTAATTTCCTGGACTACAATGATTTCTATGGACGAAGAGAATGCCATCTCTTTATTCAATGAGATGAGATTGGATGGAGTATATCCAAATGATGTTACATTTGTTGGACTAATCCATGCTATATCAACTAGGAAGTTGGTGGAAGAAGGCCTTATGATTCATGGGTTTTGCACAAAGACTGGATTTTTGTCAAAGCATAATGTTTGCAATAGCTTTATCACCATGTATGCTAAGTTTGAGTCCATGGATGATTCTGTCAAGGTTTTTGAGGAGTTGGACTTCAGAGAAATCATATCATGGAATGCTTTGATCTCAGGGTATGCTCAGAACGGGCTGTGTCAGGATGCACTGAAGACATTCTTGTCTGCAATCATGGAGTCCACGCCTAACAACTACACATTTGGTAGTGTCTTGAGTGCAATTGGTGATGCTCATGACATTTCTCTGAAGTATGGCCAGCGATGCCTCTCCTTTTTGATAAAACTTGGATCAGTCACTCACTCGATTACAGCAGGTGCTCTCCTTGATATGTATGCAAAGCGAGGAAGCATTTGCGAGTCCCAAAGAGTTTTCAGTGAGACCCCTCACAGAACTCAGTGTGCTTGGACATCAATAATATCTGCATATGCTGGGCATGGAGACTATGACTCAGTAATCGAATTGTTCTACCAGATGGATAAAGAAGGGGTAAAACCTGACTCGATCACATTTCTTTCTGTACTAAGCGCATGTAGCAGAAAGGGATCAGTTGAGATGGGCCACCATTTCTTTGAATCAATGGTCAAAGACTATCAGATTGAATCATCTCCTCAACATTATGCTTGTATGGTGGACATGTTAGGCTGGGCAGGAAAGCTGGAGGAAGCAGAGGAATTGACGAGTCAGATGTCAGGACAGCCGAGTTTTTCTTTGTTGCAAAGCTTGCTTGGGGCTTGCACGATACATGGGAATGTGGAGATGGCTGAGAGAGTTGCAGATGCTTTAATGCGAATGGAGCCAACTGAATCAGGTTCGTATGTGCTGTTGTCCAACTTGTATGCAGAGAAAGGGGACTGGGAAATGGTGGCAAAAATAAGGAAACAGATGAGAGATAGTGGAGTGAGAAAGGAATTGGGATTTAGCTGGTTGGATAATGGTGATGCTGATGGTTCTTTGTATCTCCACGGGTTTTCGTCAGGTGATACCTCTCACCGCCAGTCTGAAGAGATAAGTAGAATGGCGAAATGCATAGGACTAGAAATGAAGTTTTTGAGAGAGAACATGGCTGAGATAGACTCACTGAAACAAGACAGTGAGACACATTCTCAAGTGCCTCATGATGAAGAAGGCTTGCATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000960 GO:0000962 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010468 GO:0010604 GO:0016070 GO:0016787 GO:0016788 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031329 GO:0031331 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0045935 GO:0046483 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0061013 GO:0061014 GO:0065007 GO:0071704 GO:0080090 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363 GO:1903311 GO:1903313 GO:1905637 GO:1905639

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

698

Amino Acids

77.6

Weight (kDa)

5.4

Isoelectric Point (pI)

44.21

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	451 - 497	4.1e-10	PPR repeat family
E_motif	PF20431	567 - 628	8.3e-19	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003910)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G32430 AT4G32430
fragaria_vesca	FvH4_1g03430
malus_domestica	MD15G1174400.v1.1
prunus_persica	Prupe.5G003100_v2.0.a1 Prupe.7G240400_v2.0.a1 Prupe.7G241500_v2.0.a1 Prupe.7G241700_v2.0.a1 Prupe.8G249000_v2.0.a1
pyrus_communis	pycom15g15600
rosa_chinensis	RchiOBHm_Chr2g0088661 RchiOBHm_Chr5g0002171
rosa_laevigata	RLG00000015973 RLG00000015974 RLG00000031004
rosa_multiflora	Rmu_sc0006835.1_g000012 Rmu_sc0006835.1_g000013 Rmu_sc0013155.1_g000001 Rmu_sc0015442.1_g000012 Rmu_sc0015442.1_g000013 Rmu_sc0024326.1_g000001 Rmu_sc0041985.1_g000001
rosa_roxburghii	Rroxscaffold_2G00152420
rosa_rugosa	Rorug01G0485700
rosa_samantha	Rh2AG041200 Rh2BG039900 Rh2CG040700 Rh2DG040300 Rh5AG016800 Rh5AG016900 Rh5CG018300 Rh5CG018400 Rh5CG018500
rosa_wichuraiana	Rw2G003320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	491
AarI	CACCTGC	1 cut(s)	1259
AasI	GACNNNNNNGTC	2 cut(s)	147, 1117
Acc36I	ACCTGC	1 cut(s)	1259
AccBSI	CCGCTC	1 cut(s)	38
AciI	CCGC	6 cut(s)	26, 36, 398, 550, 690, 1948
AclWI	GGATC	2 cut(s)	1252, 1507
AcoI	YGGCCR	1 cut(s)	1210
AcsI	RAATTY	4 cut(s)	5, 99, 220, 703
AcuI	CTGAAG	4 cut(s)	1021, 1127, 1223, 1977
AfaI	GTAC	3 cut(s)	239, 379, 1476
AfiI	CCNNNNNNNGG	1 cut(s)	158
AflII	CTTAAG	1 cut(s)	446
AflIII	ACRYGT	1 cut(s)	1590
AgsI	TTSAA	8 cut(s)	104, 335, 504, 620, 668, 814, 1529, 1556
AhlI	ACTAGT	1 cut(s)	671
AjnI	CCWGG	1 cut(s)	764
AjuI	GAANNNNNNNTTGG	2 cut(s)	459, 491
AluBI	AGCT	9 cut(s)	72, 129, 248, 527, 686, 969, 1612, 1677, 1878
AluI	AGCT	9 cut(s)	72, 129, 248, 527, 686, 969, 1612, 1677, 1878
Alw21I	GWGCWC	1 cut(s)	1276
Alw26I	GTCTC	6 cut(s)	120, 505, 712, 1328, 1389, 2045
AlwI	GGATC	2 cut(s)	1252, 1507
AlwNI	CAGNNNCTG	1 cut(s)	22
AoxI	GGCC	4 cut(s)	76, 904, 1210, 1513
ApeKI	GCWGC	1 cut(s)	22
ApoI	RAATTY	4 cut(s)	5, 99, 220, 703
ArsI	GACNNNNNNTTYG	2 cut(s)	925, 957
Asp700I	GAANNNNTTC	2 cut(s)	411, 1112
AspLEI	GCGC	2 cut(s)	487, 1484
AspS9I	GGNCC	3 cut(s)	77, 140, 1513
AsuC2I	CCSGG	1 cut(s)	159
AsuHPI	GGTGA	8 cut(s)	379, 476, 658, 967, 1193, 1904, 1937, 1946
AsuII	TTCGAA	1 cut(s)	218
AvaII	GGWCC	1 cut(s)	140
BalI	TGGCCA	1 cut(s)	1212
BarI	GAAGNNNNNNTAC	2 cut(s)	612, 644
BbsI	GAAGAC	1 cut(s)	1115
Bbv12I	GWGCWC	1 cut(s)	1276
BbvI	GCAGC	1 cut(s)	9
BccI	CCATC	8 cut(s)	275, 455, 809, 824, 1423, 1504, 1708, 1895
BceAI	ACGGC	1 cut(s)	91
BcgI	CGANNNNNNTGC	2 cut(s)	779, 813
BciT130I	CCWGG	1 cut(s)	766
BcnI	CCSGG	1 cut(s)	159
BcoDI	GTCTC	6 cut(s)	120, 505, 712, 1328, 1389, 2045
BcuI	ACTAGT	1 cut(s)	671
BfaI	CTAG	4 cut(s)	528, 672, 885, 1991
BfrI	CTTAAG	1 cut(s)	446
BfuAI	ACCTGC	1 cut(s)	1259
BisI	GCNGC	2 cut(s)	23, 26
BlsI	GCNGC	2 cut(s)	24, 27
Bme1390I	CCNGG	2 cut(s)	159, 766
Bme18I	GGWCC	1 cut(s)	140
BmgT120I	GGNCC	3 cut(s)	77, 140, 1513
BmiI	GGNNCC	4 cut(s)	63, 141, 142, 1752
BmrFI	CCNGG	2 cut(s)	159, 766
BmrI	ACTGGG	1 cut(s)	1819
BmsI	GCATC	7 cut(s)	9, 152, 1090, 1174, 1208, 1723, 1885
BmuI	ACTGGG	1 cut(s)	1819
BpiI	GAAGAC	1 cut(s)	1115
BplI	GAGNNNNNCTC	4 cut(s)	346, 378, 2015, 2047
BpmI	CTGGAG	1 cut(s)	1634
Bpu14I	TTCGAA	1 cut(s)	218
BpuEI	CTTGAG	3 cut(s)	582, 1189, 2046
BpuMI	CCSGG	1 cut(s)	159
BsaI	GGTCTC	1 cut(s)	1328
BsaJI	CCNNGG	5 cut(s)	119, 134, 172, 999, 1918
BsaWI	WCCGGW	1 cut(s)	364
Bsc4I	CCNNNNNNNGG	1 cut(s)	158
Bse1I	ACTGG	3 cut(s)	940, 1814, 1951
Bse3DI	GCAATG	4 cut(s)	273, 636, 648, 760
BseBI	CCWGG	1 cut(s)	766
BseDI	CCNNGG	5 cut(s)	119, 134, 172, 999, 1918
BseGI	GGATG	7 cut(s)	167, 466, 565, 663, 835, 1009, 1105
BseLI	CCNNNNNNNGG	1 cut(s)	158
BseMI	GCAATG	4 cut(s)	273, 636, 648, 760
BseMII	CTCAG	6 cut(s)	1083, 1094, 1364, 1419, 1710, 2013
BseNI	ACTGG	3 cut(s)	940, 1814, 1951
BseRI	GAGGAG	3 cut(s)	108, 1040, 1554
BseXI	GCAGC	1 cut(s)	9
BseYI	CCCAGC	3 cut(s)	248, 1385, 1599
BsgI	GTGCAG	1 cut(s)	696
Bsh1285I	CGRYCG	1 cut(s)	751
BshFI	GGCC	4 cut(s)	78, 906, 1212, 1515
BsiEI	CGRYCG	1 cut(s)	751
BsiHKAI	GWGCWC	1 cut(s)	1276
BsiSI	CCGG	2 cut(s)	159, 365
BslFI	GGGAC	3 cut(s)	153, 1300, 1820
BslI	CCNNNNNNNGG	1 cut(s)	158
BsmAI	GTCTC	6 cut(s)	120, 505, 712, 1328, 1389, 2045
BsmBI	CGTCTC	2 cut(s)	120, 505
BsmFI	GGGAC	3 cut(s)	153, 1300, 1820
BsmI	GAATGC	5 cut(s)	433, 487, 580, 802, 1063
BsnI	GGCC	4 cut(s)	78, 906, 1212, 1515
Bso31I	GGTCTC	1 cut(s)	1328
Bsp119I	TTCGAA	1 cut(s)	218
Bsp1286I	GDGCHC	1 cut(s)	1276
Bsp1407I	TGTACA	2 cut(s)	237, 377
Bsp143I	GATC	5 cut(s)	748, 1065, 1244, 1458, 1499
Bsp19I	CCATGG	1 cut(s)	999
BspACI	CCGC	6 cut(s)	26, 36, 398, 550, 690, 1948
BspANI	GGCC	4 cut(s)	78, 906, 1212, 1515
BspCNI	CTCAG	6 cut(s)	1082, 1093, 1363, 1418, 1711, 2014
BspHI	TCATGA	3 cut(s)	741, 1189, 2071
BspLI	GGNNCC	4 cut(s)	63, 141, 142, 1752
BspMI	ACCTGC	1 cut(s)	1259
BspPI	GGATC	2 cut(s)	1252, 1507
BspT104I	TTCGAA	1 cut(s)	218
BspTI	CTTAAG	1 cut(s)	446
BspTNI	GGTCTC	1 cut(s)	1328
BsrBI	CCGCTC	1 cut(s)	38
BsrDI	GCAATG	4 cut(s)	273, 636, 648, 760
BsrGI	TGTACA	2 cut(s)	237, 377
BsrI	ACTGG	3 cut(s)	940, 1814, 1951
BssECI	CCNNGG	5 cut(s)	119, 134, 172, 999, 1918
BssMI	GATC	5 cut(s)	748, 1065, 1244, 1458, 1499
BssT1I	CCWWGG	2 cut(s)	134, 999
Bst2UI	CCWGG	1 cut(s)	766
Bst4CI	ACNGT	3 cut(s)	214, 382, 2048
Bst6I	CTCTTC	3 cut(s)	638, 786, 1953
BstAFI	CTTAAG	1 cut(s)	446
BstAPI	GCANNNNNTGC	1 cut(s)	1678
BstAUI	TGTACA	2 cut(s)	237, 377
BstBI	TTCGAA	1 cut(s)	218
BstC8I	GCNNGC	7 cut(s)	131, 688, 692, 1214, 1679, 1690, 2087
BstDEI	CTNAG	8 cut(s)	987, 1069, 1080, 1350, 1405, 1478, 1719, 2022
BstDSI	CCRYGG	3 cut(s)	172, 999, 1918
BstF5I	GGATG	7 cut(s)	167, 466, 565, 663, 835, 1009, 1105
BstHHI	GCGC	2 cut(s)	487, 1484
BstKTI	GATC	5 cut(s)	751, 1068, 1247, 1461, 1502
BstMAI	GTCTC	6 cut(s)	120, 505, 712, 1328, 1389, 2045
BstMBI	GATC	5 cut(s)	748, 1065, 1244, 1458, 1499
BstMCI	CGRYCG	1 cut(s)	751
BstMWI	GCNNNNNNNGC	6 cut(s)	395, 683, 1218, 1488, 1678, 1750
BstNI	CCWGG	1 cut(s)	766
BstNSI	RCATGY	2 cut(s)	1488, 1594
BstSCI	CCNGG	2 cut(s)	157, 764
BstV1I	GCAGC	1 cut(s)	9
BstV2I	GAAGAC	1 cut(s)	1115
BsuRI	GGCC	4 cut(s)	78, 906, 1212, 1515
BtgI	CCRYGG	3 cut(s)	172, 999, 1918
BtgZI	GCGATG	1 cut(s)	1231
BtsCI	GGATG	7 cut(s)	167, 466, 565, 663, 835, 1009, 1105
BtsIMutI	CAGTG	5 cut(s)	1103, 1336, 1358, 2033, 2053
BveI	ACCTGC	1 cut(s)	1259
Cac8I	GCNNGC	7 cut(s)	131, 688, 692, 1214, 1679, 1690, 2087
CaiI	CAGNNNCTG	1 cut(s)	22
CciI	TCATGA	3 cut(s)	741, 1189, 2071
CfoI	GCGC	2 cut(s)	487, 1484
Cfr13I	GGNCC	3 cut(s)	77, 140, 1513
Csp6I	GTAC	3 cut(s)	238, 378, 1475
CviQI	GTAC	3 cut(s)	238, 378, 1475
DdeI	CTNAG	8 cut(s)	987, 1069, 1080, 1350, 1405, 1478, 1719, 2022
DpnI	GATC	5 cut(s)	750, 1067, 1246, 1460, 1501
DpnII	GATC	5 cut(s)	748, 1065, 1244, 1458, 1499
DrdI	GACNNNNNNGTC	2 cut(s)	147, 1117
DseDI	GACNNNNNNGTC	2 cut(s)	147, 1117
EaeI	YGGCCR	1 cut(s)	1210
Eam1104I	CTCTTC	3 cut(s)	638, 786, 1953
EarI	CTCTTC	3 cut(s)	638, 786, 1953
Eco130I	CCWWGG	2 cut(s)	134, 999
Eco147I	AGGCCT	1 cut(s)	906
Eco31I	GGTCTC	1 cut(s)	1328
Eco47I	GGWCC	1 cut(s)	140
Eco57I	CTGAAG	4 cut(s)	1021, 1127, 1223, 1977
EcoO109I	RGGNCCY	1 cut(s)	140
EcoRI	GAATTC	1 cut(s)	220
EcoRII	CCWGG	1 cut(s)	764
EcoT14I	CCWWGG	2 cut(s)	134, 999
EcoT22I	ATGCAT	1 cut(s)	1985
ErhI	CCWWGG	2 cut(s)	134, 999
Esp3I	CGTCTC	2 cut(s)	120, 505
FalI	AAGNNNNNCTT	4 cut(s)	891, 923, 1100, 1132
FaqI	GGGAC	3 cut(s)	153, 1300, 1820
FauI	CCCGC	1 cut(s)	683
FauNDI	CATATG	1 cut(s)	1381
Fnu4HI	GCNGC	2 cut(s)	23, 26
FokI	GGATG	7 cut(s)	174, 473, 572, 670, 842, 1016, 1112
Fsp4HI	GCNGC	2 cut(s)	23, 26
FspBI	CTAG	4 cut(s)	528, 672, 885, 1991
GlaI	GCGC	2 cut(s)	486, 1483
GluI	GCNGC	2 cut(s)	23, 26
GsaI	CCCAGC	3 cut(s)	252, 1389, 1603
GsuI	CTGGAG	1 cut(s)	1634
HaeIII	GGCC	4 cut(s)	78, 906, 1212, 1515
HapII	CCGG	2 cut(s)	159, 365
HhaI	GCGC	2 cut(s)	487, 1484
Hin6I	GCGC	2 cut(s)	485, 1482
HinP1I	GCGC	2 cut(s)	485, 1482
HincII	GTYRAC	1 cut(s)	33
HindII	GTYRAC	1 cut(s)	33
HindIII	AAGCTT	1 cut(s)	1675
HpaI	GTTAAC	1 cut(s)	33
HpaII	CCGG	2 cut(s)	159, 365
HphI	GGTGA	8 cut(s)	379, 476, 658, 967, 1193, 1904, 1937, 1946
Hpy166II	GTNNAC	5 cut(s)	33, 95, 240, 1137, 1588
Hpy188I	TCNGA	8 cut(s)	123, 153, 1040, 1083, 1203, 1551, 1641, 1957
Hpy188III	TCNNGA	7 cut(s)	599, 742, 1097, 1168, 1190, 1647, 2072
Hpy8I	GTNNAC	5 cut(s)	33, 95, 240, 1137, 1588
HpyAV	CCTTC	3 cut(s)	896, 1433, 2075
HpyCH4III	ACNGT	3 cut(s)	214, 382, 2048
HpyCH4IV	ACGT	1 cut(s)	514
HpyF10VI	GCNNNNNNNGC	6 cut(s)	395, 683, 1218, 1488, 1678, 1750
HpyF3I	CTNAG	8 cut(s)	987, 1069, 1080, 1350, 1405, 1478, 1719, 2022
HpySE526I	ACGT	1 cut(s)	514
HspAI	GCGC	2 cut(s)	485, 1482
KflI	GGGWCCC	1 cut(s)	140
KspAI	GTTAAC	1 cut(s)	33
Kzo9I	GATC	5 cut(s)	748, 1065, 1244, 1458, 1499
LmnI	GCTCC	2 cut(s)	367, 1750
Lsp1109I	GCAGC	1 cut(s)	9
LweI	GCATC	7 cut(s)	9, 152, 1090, 1174, 1208, 1723, 1885
MaeI	CTAG	4 cut(s)	528, 672, 885, 1991
MaeII	ACGT	1 cut(s)	514
MaeIII	GTNAC	6 cut(s)	208, 367, 423, 590, 850, 1249
MalI	GATC	5 cut(s)	750, 1067, 1246, 1460, 1501
MbiI	CCGCTC	1 cut(s)	38
MboI	GATC	5 cut(s)	748, 1065, 1244, 1458, 1499
MboII	GAAGA	8 cut(s)	419, 625, 712, 803, 911, 1120, 1970, 2090
MfeI	CAATTG	2 cut(s)	428, 1176
MhlI	GDGCHC	1 cut(s)	1276
MlsI	TGGCCA	1 cut(s)	1212
MluNI	TGGCCA	1 cut(s)	1212
MlyI	GAGTC	7 cut(s)	1004, 1142, 1322, 1397, 1448, 1645, 2024
MmeI	TCCRAC	5 cut(s)	438, 841, 1011, 1809, 1863
Mox20I	TGGCCA	1 cut(s)	1212
Mph1103I	ATGCAT	1 cut(s)	1985
MroXI	GAANNNNTTC	2 cut(s)	411, 1112
MscI	TGGCCA	1 cut(s)	1212
MseI	TTAA	5 cut(s)	32, 447, 555, 707, 1739
MslI	CAYNNNNRTG	2 cut(s)	641, 1704
Msp20I	TGGCCA	1 cut(s)	1212
MspCI	CTTAAG	1 cut(s)	446
MspI	CCGG	2 cut(s)	159, 365
MspR9I	CCNGG	2 cut(s)	159, 766
MunI	CAATTG	2 cut(s)	428, 1176
Mva1269I	GAATGC	5 cut(s)	433, 487, 580, 802, 1063
MvaI	CCWGG	1 cut(s)	766
MwoI	GCNNNNNNNGC	6 cut(s)	395, 683, 1218, 1488, 1678, 1750
NciI	CCSGG	1 cut(s)	159
NcoI	CCATGG	1 cut(s)	999
NdeI	CATATG	1 cut(s)	1381
NdeII	GATC	5 cut(s)	748, 1065, 1244, 1458, 1499
NlaIV	GGNNCC	4 cut(s)	63, 141, 142, 1752
NmeAIII	GCCGAG	1 cut(s)	1680
NmuCI	GTSAC	2 cut(s)	367, 1249
NsiI	ATGCAT	1 cut(s)	1985
NspI	RCATGY	2 cut(s)	1488, 1594
NspV	TTCGAA	1 cut(s)	218
PagI	TCATGA	3 cut(s)	741, 1189, 2071
PaqCI	CACCTGC	1 cut(s)	1259
PceI	AGGCCT	1 cut(s)	906
PciI	ACATGT	1 cut(s)	1590
PctI	GAATGC	5 cut(s)	433, 487, 580, 802, 1063
PdmI	GAANNNNTTC	2 cut(s)	411, 1112
PfeI	GAWTC	5 cut(s)	913, 1007, 1529, 1556, 1760
PfoI	TCCNGGA	1 cut(s)	764
PkrI	GCNGC	2 cut(s)	24, 27
Ple19I	CGATCG	1 cut(s)	751
PleI	GAGTC	7 cut(s)	1003, 1141, 1321, 1397, 1448, 1644, 2024
PpsI	GAGTC	7 cut(s)	1003, 1141, 1321, 1397, 1448, 1644, 2024
PpuMI	RGGWCCY	1 cut(s)	140
PscI	ACATGT	1 cut(s)	1590
PsiI	TTATAA	1 cut(s)	491
Psp5II	RGGWCCY	1 cut(s)	140
Psp6I	CCWGG	1 cut(s)	764
PspFI	CCCAGC	3 cut(s)	248, 1385, 1599
PspGI	CCWGG	1 cut(s)	764
PspN4I	GGNNCC	4 cut(s)	63, 141, 142, 1752
PspPI	GGNCC	3 cut(s)	77, 140, 1513
PspPPI	RGGWCCY	1 cut(s)	140
PstNI	CAGNNNCTG	1 cut(s)	22
PvuI	CGATCG	1 cut(s)	751
RsaI	GTAC	3 cut(s)	239, 379, 1476
RsaNI	GTAC	3 cut(s)	238, 378, 1475
RseI	CAYNNNNRTG	2 cut(s)	641, 1704
SaqAI	TTAA	5 cut(s)	32, 447, 555, 707, 1739
SatI	GCNGC	2 cut(s)	23, 26
Sau3AI	GATC	5 cut(s)	748, 1065, 1244, 1458, 1499
Sau96I	GGNCC	3 cut(s)	77, 140, 1513
SchI	GAGTC	7 cut(s)	1004, 1142, 1322, 1397, 1448, 1645, 2024
ScrFI	CCNGG	2 cut(s)	159, 766
SduI	GDGCHC	1 cut(s)	1276
SfaNI	GCATC	7 cut(s)	9, 152, 1090, 1174, 1208, 1723, 1885
SfuI	TTCGAA	1 cut(s)	218
SinI	GGWCC	1 cut(s)	140
SmiMI	CAYNNNNRTG	2 cut(s)	641, 1704
SmlI	CTYRAG	4 cut(s)	446, 597, 1168, 2061
SmoI	CTYRAG	4 cut(s)	446, 597, 1168, 2061
SpeI	ACTAGT	1 cut(s)	671
SseBI	AGGCCT	1 cut(s)	906
SsiI	CCGC	6 cut(s)	26, 36, 398, 550, 690, 1948
SspI	AATATT	1 cut(s)	88
SspMI	CTAG	4 cut(s)	528, 672, 885, 1991
StuI	AGGCCT	1 cut(s)	906
StyD4I	CCNGG	2 cut(s)	157, 764
StyI	CCWWGG	2 cut(s)	134, 999
TaaI	ACNGT	3 cut(s)	214, 382, 2048
TaiI	ACGT	1 cut(s)	517
TaqI	TCGA	4 cut(s)	218, 1259, 1413, 1457
TatI	WGTACW	3 cut(s)	237, 377, 1474
TauI	GCSGC	1 cut(s)	28
TfiI	GAWTC	5 cut(s)	913, 1007, 1529, 1556, 1760
Tru1I	TTAA	5 cut(s)	32, 447, 555, 707, 1739
Tru9I	TTAA	5 cut(s)	32, 447, 555, 707, 1739
TscAI	CASTG	5 cut(s)	1110, 1336, 1358, 2040, 2053
TseFI	GTSAC	2 cut(s)	367, 1249
TseI	GCWGC	1 cut(s)	22
Tsp45I	GTSAC	2 cut(s)	367, 1249
TspDTI	ATGAA	9 cut(s)	17, 420, 558, 625, 674, 758, 905, 2012, 2091
TspRI	CASTG	5 cut(s)	1110, 1336, 1358, 2040, 2053
Vha464I	CTTAAG	1 cut(s)	446
VpaK11BI	GGWCC	1 cut(s)	140
XapI	RAATTY	4 cut(s)	5, 99, 220, 703
XceI	RCATGY	2 cut(s)	1488, 1594
XmnI	GAANNNNTTC	2 cut(s)	411, 1112
XspI	CTAG	4 cut(s)	528, 672, 885, 1991
Zsp2I	ATGCAT	1 cut(s)	1985

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.