Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0003910

Physical Location & Seq

Genomic Coordinates Forward (+)

1250313 .. 1252322

Gene Structure 2010 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ28355

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1728 bp

ATGAGTATGTACACTAAAGCTGGGAGGTTTGATAGTGCAATGTGTATTTTTGATGGGTTTCAAACGAGTGAGGGGGTGTTGAGTTTTGCTCCCAGGATGCATTCAAATGGGATAGGTTTGGATCCGGTGACTTATTGTACAGTTCTTGCTTTTTGTGCGGAGTATGAAGATTTTCTGTTTGGGTTACATTTGCATTCTCTCATACTTAAGTCTGGGTTGGATCGTGAAGATTTTGTTGGGAATGCGCTTATAAGTATGTATTCAAGGTGGAGACGTTTGATAGAAGCTAGGAATGTGTTTGATGAAATGCGGATTAAGGATGTGGTTTCTTGGAATGCAATACTATCAGGTTACTCTCAAGAGGGAAATCATGGGCTTGAAGCAGTTTTACTCTTCATTGAAATGGTGAGAAAAGGGATGAAACTTGATCATGTCTCATTTACTAGCGCAGTTTCAGCTTGCGGGCATGAGAAGAATTTAAGACTTGGGAGACAGATACATGGCTTGACAGTAAAATCAGGGAAGTTGGTGGAAGAAGGCCTTATGATTCATGGGTTTTGCACAAAGACTGGATTTTTGTCAAAGCATAATGTTTGCAATAGCTTTATCACCATGTATGCTAAGTTTGAGTCCATGGATGATTCTGTCAAGGTTTTTGAGGAGTTGGACTTCAGAGAAATCATATCATGGAATGCTTTGATCTCAGGGTATGCTCAGAACGGGCTGTGTCAGGATGCACTGAAGACATTCTTGTCTGCAATCATGGAGTCCAGGCCTAACAACTACACATTTGGTAGTGTCTTGAGTGCAATTGGTGATGCTCATGACATTTCTCTGAAGTATGGCCAGCGATGCCTCTCCTTTTTGATAAAACTTGGATCAGTCACTGACTCGATTACAGCAGGTGCTCTCCTTGATATGTATGCAAAGCAAGGAAGCATTTGCGAGTCCCAAAGAGTTTTCAGTGAGACCCCTCACAGAACTCAGTGTGCTTGGACAGCAATAATATCTGCATATGCTGGGCATGGAGACTATGACTCAGTAATCGAATTGTTCTACCAGATGGATAAAGAAGGGGTAAAACCTGACTCGATCACATTTCTTTCTGTACTAAGCGCATGTAGCAGAAAGGGATCAGTTGAGATGGGCCACCATTTCTTTGAATCAATGGTCAAAGACTATCAGATTGAATCATCTCCTCAACATTATGCTTGTATGGTGGACATGTTAGGCCAGGCAGGAAAGCTGGAGGAAGCAGAGGAATTGATGAGTCAGATGTCAGGACAGCCGAGTTTTTCTTTGTTGCAAAGCTTGCTTGGGGCTTGCACGATACATGGGAATGTGGAGATGGCTGAGAGAGTTGCAGATGCTTTAATGCGAATGGAGCCAACTGAATCAGGTTCGTATGTGCTGTTGTCCAACTTGTATGGAGAGAAAGGGGACTGGGAAATGGTGGCAAAAATAAGGAAACAGATGAGAGATAGGGGAGTGAGAAAGGAAGTGGGATTTAGCTGGTTGGATAATGGTGATGCTGATGGTTCTTTGTATCTCCACGGGTTTTCATCAGGTGATACCTCTCACCGCCAGTCTGAAGAGATAAGTAGAATGGCGAAATGCATAGGACTAGAAATGAAGTTTTTGAGAGAGAACATGGCTGAGATAGACTCACTGAAACAAGACAGTGAGACACATTCTCAAGTGCCTCATGATGAAGAAGGCTTGTATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000960 GO:0000962 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010468 GO:0010604 GO:0016070 GO:0016787 GO:0016788 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031329 GO:0031331 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0045935 GO:0046483 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0061013 GO:0061014 GO:0065007 GO:0071704 GO:0080090 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363 GO:1903311 GO:1903313 GO:1905637 GO:1905639

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

575

Amino Acids

64.22

Weight (kDa)

5.38

Isoelectric Point (pI)

46.5

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	106 - 154	3.5e-09	PPR repeat family
PPR_2	PF13041	329 - 375	2.7e-10	PPR repeat family
E_motif	PF20431	445 - 506	1.3e-17	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003910)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G32430 AT4G32430
fragaria_vesca	FvH4_1g03430
malus_domestica	MD15G1174400.v1.1
prunus_persica	Prupe.5G003100_v2.0.a1 Prupe.7G240400_v2.0.a1 Prupe.7G241500_v2.0.a1 Prupe.7G241700_v2.0.a1 Prupe.8G249000_v2.0.a1
pyrus_communis	pycom15g15600
rosa_chinensis	RchiOBHm_Chr2g0088661 RchiOBHm_Chr5g0002171
rosa_laevigata	RLG00000015973 RLG00000015974 RLG00000031004
rosa_multiflora	Rmu_sc0006835.1_g000012 Rmu_sc0006835.1_g000013 Rmu_sc0013155.1_g000001 Rmu_sc0015442.1_g000012 Rmu_sc0015442.1_g000013 Rmu_sc0024326.1_g000001 Rmu_sc0041985.1_g000001
rosa_roxburghii	Rroxscaffold_2G00152420
rosa_rugosa	Rorug01G0485700
rosa_samantha	Rh2AG041200 Rh2BG039900 Rh2CG040700 Rh2DG040300 Rh5AG016800 Rh5AG016900 Rh5CG018300 Rh5CG018400 Rh5CG018500
rosa_wichuraiana	Rw2G003320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	251
AarI	CACCTGC	1 cut(s)	893
AasI	GACNNNNNNGTC	1 cut(s)	751
Acc36I	ACCTGC	1 cut(s)	893
AciI	CCGC	4 cut(s)	158, 310, 462, 1582
AclWI	GGATC	5 cut(s)	116, 129, 228, 886, 1141
AcoI	YGGCCR	1 cut(s)	844
AcsI	RAATTY	1 cut(s)	475
AcuI	CTGAAG	4 cut(s)	655, 761, 857, 1611
AfaI	GTAC	3 cut(s)	11, 139, 1110
AflII	CTTAAG	1 cut(s)	206
AflIII	ACRYGT	1 cut(s)	1224
AgsI	TTSAA	7 cut(s)	62, 105, 264, 380, 401, 1163, 1190
AjnI	CCWGG	3 cut(s)	92, 770, 1233
AjuI	GAANNNNNNNTTGG	2 cut(s)	219, 251
AluBI	AGCT	7 cut(s)	20, 287, 458, 603, 1246, 1311, 1512
AluI	AGCT	7 cut(s)	20, 287, 458, 603, 1246, 1311, 1512
Alw21I	GWGCWC	1 cut(s)	910
Alw26I	GTCTC	6 cut(s)	265, 439, 484, 962, 1023, 1679
AlwI	GGATC	5 cut(s)	116, 129, 228, 886, 1141
AlwNI	CAGNNNCTG	1 cut(s)	887
AoxI	GGCC	5 cut(s)	538, 773, 844, 1147, 1231
ApoI	RAATTY	1 cut(s)	475
ArsI	GACNNNNNNTTYG	2 cut(s)	559, 591
Asp700I	GAANNNNTTC	2 cut(s)	171, 746
AspLEI	GCGC	3 cut(s)	247, 449, 1118
AspS9I	GGNCC	1 cut(s)	1147
AsuHPI	GGTGA	7 cut(s)	139, 418, 601, 827, 1538, 1571, 1580
BalI	TGGCCA	1 cut(s)	846
BamHI	GGATCC	1 cut(s)	121
BarI	GAAGNNNNNNTAC	2 cut(s)	372, 404
BbsI	GAAGAC	1 cut(s)	749
Bbv12I	GWGCWC	1 cut(s)	910
BccI	CCATC	5 cut(s)	47, 1057, 1138, 1342, 1529
BciT130I	CCWGG	3 cut(s)	94, 772, 1235
BclI	TGATCA	1 cut(s)	427
BcoDI	GTCTC	6 cut(s)	265, 439, 484, 962, 1023, 1679
BfaI	CTAG	3 cut(s)	288, 444, 1625
BfrI	CTTAAG	1 cut(s)	206
BfuAI	ACCTGC	1 cut(s)	893
Bme1390I	CCNGG	3 cut(s)	94, 772, 1235
BmgT120I	GGNCC	1 cut(s)	1147
BmiI	GGNNCC	2 cut(s)	123, 1386
BmrFI	CCNGG	3 cut(s)	94, 772, 1235
BmrI	ACTGGG	1 cut(s)	1453
BmsI	GCATC	6 cut(s)	87, 724, 808, 842, 1357, 1519
BmuI	ACTGGG	1 cut(s)	1453
BpiI	GAAGAC	1 cut(s)	749
BplI	GAGNNNNNCTC	4 cut(s)	73, 105, 1649, 1681
BpmI	CTGGAG	1 cut(s)	1268
BpuEI	CTTGAG	3 cut(s)	342, 823, 1680
BsaI	GGTCTC	1 cut(s)	962
BsaJI	CCNNGG	3 cut(s)	92, 633, 1552
BsaWI	WCCGGW	1 cut(s)	124
Bse1I	ACTGG	3 cut(s)	574, 1448, 1585
Bse3DI	GCAATG	1 cut(s)	45
BseBI	CCWGG	3 cut(s)	94, 772, 1235
BseDI	CCNNGG	3 cut(s)	92, 633, 1552
BseGI	GGATG	5 cut(s)	102, 325, 423, 643, 739
BseMI	GCAATG	1 cut(s)	45
BseMII	CTCAG	6 cut(s)	717, 728, 998, 1053, 1344, 1647
BseNI	ACTGG	3 cut(s)	574, 1448, 1585
BseRI	GAGGAG	2 cut(s)	674, 1188
BseYI	CCCAGC	2 cut(s)	20, 1019
BshFI	GGCC	5 cut(s)	540, 775, 846, 1149, 1233
BsiHKAI	GWGCWC	1 cut(s)	910
BsiSI	CCGG	1 cut(s)	125
BslFI	GGGAC	2 cut(s)	934, 1454
BsmAI	GTCTC	6 cut(s)	265, 439, 484, 962, 1023, 1679
BsmBI	CGTCTC	1 cut(s)	265
BsmFI	GGGAC	2 cut(s)	934, 1454
BsmI	GAATGC	5 cut(s)	100, 193, 247, 340, 697
BsnI	GGCC	5 cut(s)	540, 775, 846, 1149, 1233
Bso31I	GGTCTC	1 cut(s)	962
Bsp1286I	GDGCHC	1 cut(s)	910
Bsp1407I	TGTACA	2 cut(s)	9, 137
Bsp143I	GATC	7 cut(s)	121, 220, 427, 699, 878, 1092, 1133
Bsp19I	CCATGG	1 cut(s)	633
BspACI	CCGC	4 cut(s)	158, 310, 462, 1582
BspANI	GGCC	5 cut(s)	540, 775, 846, 1149, 1233
BspCNI	CTCAG	6 cut(s)	716, 727, 997, 1052, 1345, 1648
BspHI	TCATGA	2 cut(s)	823, 1705
BspLI	GGNNCC	2 cut(s)	123, 1386
BspMI	ACCTGC	1 cut(s)	893
BspPI	GGATC	5 cut(s)	116, 129, 228, 886, 1141
BspTI	CTTAAG	1 cut(s)	206
BspTNI	GGTCTC	1 cut(s)	962
BsrDI	GCAATG	1 cut(s)	45
BsrGI	TGTACA	2 cut(s)	9, 137
BsrI	ACTGG	3 cut(s)	574, 1448, 1585
BssECI	CCNNGG	3 cut(s)	92, 633, 1552
BssMI	GATC	7 cut(s)	121, 220, 427, 699, 878, 1092, 1133
BssT1I	CCWWGG	1 cut(s)	633
Bst2UI	CCWGG	3 cut(s)	94, 772, 1235
Bst4CI	ACNGT	3 cut(s)	142, 511, 1682
Bst6I	CTCTTC	2 cut(s)	398, 1587
BstAFI	CTTAAG	1 cut(s)	206
BstAPI	GCANNNNNTGC	1 cut(s)	1312
BstAUI	TGTACA	2 cut(s)	9, 137
BstC8I	GCNNGC	5 cut(s)	460, 464, 848, 1313, 1324
BstDEI	CTNAG	8 cut(s)	621, 703, 714, 984, 1039, 1112, 1353, 1656
BstDSI	CCRYGG	2 cut(s)	633, 1552
BstF5I	GGATG	5 cut(s)	102, 325, 423, 643, 739
BstHHI	GCGC	3 cut(s)	247, 449, 1118
BstKTI	GATC	7 cut(s)	124, 223, 430, 702, 881, 1095, 1136
BstMAI	GTCTC	6 cut(s)	265, 439, 484, 962, 1023, 1679
BstMBI	GATC	7 cut(s)	121, 220, 427, 699, 878, 1092, 1133
BstMWI	GCNNNNNNNGC	7 cut(s)	155, 455, 852, 998, 1122, 1312, 1384
BstNI	CCWGG	3 cut(s)	94, 772, 1235
BstNSI	RCATGY	2 cut(s)	1122, 1228
BstSCI	CCNGG	3 cut(s)	92, 770, 1233
BstV2I	GAAGAC	1 cut(s)	749
BstX2I	RGATCY	1 cut(s)	121
BstYI	RGATCY	1 cut(s)	121
BsuRI	GGCC	5 cut(s)	540, 775, 846, 1149, 1233
BtgI	CCRYGG	2 cut(s)	633, 1552
BtgZI	GCGATG	1 cut(s)	865
BtsCI	GGATG	5 cut(s)	102, 325, 423, 643, 739
BtsIMutI	CAGTG	6 cut(s)	737, 885, 970, 992, 1667, 1687
BveI	ACCTGC	1 cut(s)	893
Cac8I	GCNNGC	5 cut(s)	460, 464, 848, 1313, 1324
CaiI	CAGNNNCTG	1 cut(s)	887
CciI	TCATGA	2 cut(s)	823, 1705
CfoI	GCGC	3 cut(s)	247, 449, 1118
Cfr13I	GGNCC	1 cut(s)	1147
Csp6I	GTAC	3 cut(s)	10, 138, 1109
CviQI	GTAC	3 cut(s)	10, 138, 1109
DdeI	CTNAG	8 cut(s)	621, 703, 714, 984, 1039, 1112, 1353, 1656
DpnI	GATC	7 cut(s)	123, 222, 429, 701, 880, 1094, 1135
DpnII	GATC	7 cut(s)	121, 220, 427, 699, 878, 1092, 1133
DrdI	GACNNNNNNGTC	1 cut(s)	751
DseDI	GACNNNNNNGTC	1 cut(s)	751
EaeI	YGGCCR	1 cut(s)	844
Eam1104I	CTCTTC	2 cut(s)	398, 1587
EarI	CTCTTC	2 cut(s)	398, 1587
Eco130I	CCWWGG	1 cut(s)	633
Eco147I	AGGCCT	2 cut(s)	540, 775
Eco31I	GGTCTC	1 cut(s)	962
Eco57I	CTGAAG	4 cut(s)	655, 761, 857, 1611
EcoRII	CCWGG	3 cut(s)	92, 770, 1233
EcoT14I	CCWWGG	1 cut(s)	633
EcoT22I	ATGCAT	2 cut(s)	102, 1619
ErhI	CCWWGG	1 cut(s)	633
Esp3I	CGTCTC	1 cut(s)	265
FalI	AAGNNNNNCTT	4 cut(s)	525, 557, 734, 766
FaqI	GGGAC	2 cut(s)	934, 1454
FauI	CCCGC	1 cut(s)	455
FauNDI	CATATG	1 cut(s)	1015
FbaI	TGATCA	1 cut(s)	427
FokI	GGATG	5 cut(s)	109, 332, 430, 650, 746
FspBI	CTAG	3 cut(s)	288, 444, 1625
GlaI	GCGC	3 cut(s)	246, 448, 1117
GsaI	CCCAGC	2 cut(s)	24, 1023
GsuI	CTGGAG	1 cut(s)	1268
HaeIII	GGCC	5 cut(s)	540, 775, 846, 1149, 1233
HapII	CCGG	1 cut(s)	125
HhaI	GCGC	3 cut(s)	247, 449, 1118
Hin6I	GCGC	3 cut(s)	245, 447, 1116
HinP1I	GCGC	3 cut(s)	245, 447, 1116
HindIII	AAGCTT	1 cut(s)	1309
HpaII	CCGG	1 cut(s)	125
HphI	GGTGA	7 cut(s)	139, 418, 601, 827, 1538, 1571, 1580
Hpy166II	GTNNAC	2 cut(s)	12, 1222
Hpy188I	TCNGA	6 cut(s)	674, 717, 837, 1185, 1275, 1591
Hpy188III	TCNNGA	7 cut(s)	224, 359, 731, 802, 824, 1281, 1706
Hpy8I	GTNNAC	2 cut(s)	12, 1222
HpyAV	CCTTC	3 cut(s)	530, 1067, 1709
HpyCH4III	ACNGT	3 cut(s)	142, 511, 1682
HpyCH4IV	ACGT	1 cut(s)	274
HpyF10VI	GCNNNNNNNGC	7 cut(s)	155, 455, 852, 998, 1122, 1312, 1384
HpyF3I	CTNAG	8 cut(s)	621, 703, 714, 984, 1039, 1112, 1353, 1656
HpySE526I	ACGT	1 cut(s)	274
HspAI	GCGC	3 cut(s)	245, 447, 1116
Ksp22I	TGATCA	1 cut(s)	427
Kzo9I	GATC	7 cut(s)	121, 220, 427, 699, 878, 1092, 1133
LmnI	GCTCC	2 cut(s)	94, 1384
LweI	GCATC	6 cut(s)	87, 724, 808, 842, 1357, 1519
MaeI	CTAG	3 cut(s)	288, 444, 1625
MaeII	ACGT	1 cut(s)	274
MaeIII	GTNAC	4 cut(s)	127, 183, 350, 883
MalI	GATC	7 cut(s)	123, 222, 429, 701, 880, 1094, 1135
MboI	GATC	7 cut(s)	121, 220, 427, 699, 878, 1092, 1133
MboII	GAAGA	8 cut(s)	179, 239, 385, 484, 545, 754, 1604, 1724
MfeI	CAATTG	1 cut(s)	810
MflI	RGATCY	1 cut(s)	121
MhlI	GDGCHC	1 cut(s)	910
MlsI	TGGCCA	1 cut(s)	846
MluCI	AATT	4 cut(s)	475, 810, 1049, 1262
MluNI	TGGCCA	1 cut(s)	846
MlyI	GAGTC	8 cut(s)	638, 776, 884, 956, 1031, 1082, 1279, 1658
MmeI	TCCRAC	4 cut(s)	198, 645, 1443, 1497
Mox20I	TGGCCA	1 cut(s)	846
Mph1103I	ATGCAT	2 cut(s)	102, 1619
MroXI	GAANNNNTTC	2 cut(s)	171, 746
MscI	TGGCCA	1 cut(s)	846
MseI	TTAA	4 cut(s)	207, 315, 479, 1373
MslI	CAYNNNNRTG	3 cut(s)	105, 401, 1338
Msp20I	TGGCCA	1 cut(s)	846
MspCI	CTTAAG	1 cut(s)	206
MspI	CCGG	1 cut(s)	125
MspR9I	CCNGG	3 cut(s)	94, 772, 1235
MunI	CAATTG	1 cut(s)	810
Mva1269I	GAATGC	5 cut(s)	100, 193, 247, 340, 697
MvaI	CCWGG	3 cut(s)	94, 772, 1235
MwoI	GCNNNNNNNGC	7 cut(s)	155, 455, 852, 998, 1122, 1312, 1384
NcoI	CCATGG	1 cut(s)	633
NdeI	CATATG	1 cut(s)	1015
NdeII	GATC	7 cut(s)	121, 220, 427, 699, 878, 1092, 1133
NlaIV	GGNNCC	2 cut(s)	123, 1386
NmeAIII	GCCGAG	1 cut(s)	1314
NmuCI	GTSAC	2 cut(s)	127, 883
NsiI	ATGCAT	2 cut(s)	102, 1619
NspI	RCATGY	2 cut(s)	1122, 1228
PagI	TCATGA	2 cut(s)	823, 1705
PaqCI	CACCTGC	1 cut(s)	893
PceI	AGGCCT	2 cut(s)	540, 775
PciI	ACATGT	1 cut(s)	1224
PctI	GAATGC	5 cut(s)	100, 193, 247, 340, 697
PdmI	GAANNNNTTC	2 cut(s)	171, 746
PfeI	GAWTC	5 cut(s)	547, 641, 1163, 1190, 1394
PleI	GAGTC	8 cut(s)	637, 775, 884, 955, 1031, 1082, 1278, 1658
PpsI	GAGTC	8 cut(s)	637, 775, 884, 955, 1031, 1082, 1278, 1658
PscI	ACATGT	1 cut(s)	1224
PsiI	TTATAA	1 cut(s)	251
Psp6I	CCWGG	3 cut(s)	92, 770, 1233
PspFI	CCCAGC	2 cut(s)	20, 1019
PspGI	CCWGG	3 cut(s)	92, 770, 1233
PspN4I	GGNNCC	2 cut(s)	123, 1386
PspPI	GGNCC	1 cut(s)	1147
PstNI	CAGNNNCTG	1 cut(s)	887
PsuI	RGATCY	1 cut(s)	121
RsaI	GTAC	3 cut(s)	11, 139, 1110
RsaNI	GTAC	3 cut(s)	10, 138, 1109
RseI	CAYNNNNRTG	3 cut(s)	105, 401, 1338
SaqAI	TTAA	4 cut(s)	207, 315, 479, 1373
Sau3AI	GATC	7 cut(s)	121, 220, 427, 699, 878, 1092, 1133
Sau96I	GGNCC	1 cut(s)	1147
SchI	GAGTC	8 cut(s)	638, 776, 884, 956, 1031, 1082, 1279, 1658
ScrFI	CCNGG	3 cut(s)	94, 772, 1235
SduI	GDGCHC	1 cut(s)	910
SfaNI	GCATC	6 cut(s)	87, 724, 808, 842, 1357, 1519
SmiMI	CAYNNNNRTG	3 cut(s)	105, 401, 1338
SmlI	CTYRAG	4 cut(s)	206, 357, 802, 1695
SmoI	CTYRAG	4 cut(s)	206, 357, 802, 1695
Sse9I	AATT	4 cut(s)	475, 810, 1049, 1262
SseBI	AGGCCT	2 cut(s)	540, 775
SsiI	CCGC	4 cut(s)	158, 310, 462, 1582
SspMI	CTAG	3 cut(s)	288, 444, 1625
StuI	AGGCCT	2 cut(s)	540, 775
StyD4I	CCNGG	3 cut(s)	92, 770, 1233
StyI	CCWWGG	1 cut(s)	633
TaaI	ACNGT	3 cut(s)	142, 511, 1682
TaiI	ACGT	1 cut(s)	277
TaqI	TCGA	3 cut(s)	893, 1047, 1091
TasI	AATT	4 cut(s)	475, 810, 1049, 1262
TatI	WGTACW	3 cut(s)	9, 137, 1108
TfiI	GAWTC	5 cut(s)	547, 641, 1163, 1190, 1394
Tru1I	TTAA	4 cut(s)	207, 315, 479, 1373
Tru9I	TTAA	4 cut(s)	207, 315, 479, 1373
TscAI	CASTG	6 cut(s)	744, 892, 970, 992, 1674, 1687
TseFI	GTSAC	2 cut(s)	127, 883
Tsp45I	GTSAC	2 cut(s)	127, 883
TspDTI	ATGAA	8 cut(s)	180, 318, 385, 434, 539, 1551, 1646, 1725
TspRI	CASTG	6 cut(s)	744, 892, 970, 992, 1674, 1687
Vha464I	CTTAAG	1 cut(s)	206
XapI	RAATTY	1 cut(s)	475
XceI	RCATGY	2 cut(s)	1122, 1228
XmnI	GAANNNNTTC	2 cut(s)	171, 746
XspI	CTAG	3 cut(s)	288, 444, 1625
Zsp2I	ATGCAT	2 cut(s)	102, 1619

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.