AT4G32920

glycine-rich protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0002500
Physical Location & Seq
Reverse (-)
15887270 .. 15896345
9076 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G32920.2

Sequence Viewer

Length: 4299 bp
ATGATTTCGATTTCGATTCCAATGGTGAGATTCTGTCTCTGTTTCGCGTTCGTCATCCTCGTATCTGCAAATCCGAAATTAATCAATTCGTGGGATGAGACTGCGATTAGATTCGAACCACTGTCACCTTCTCCGGCGCCGGAGCCTTCCCCGGATGATGATGATTCGTCGGTTTCATGTGTAGATGACCTAGGAGGTGTTGGCTCTTTAGATTCCACGTGTAAGCTCGTCGCTGATTTGAATCTCACACGTGACCTAAACATCACCGGTAAAGGTAATCTCCACGTTTTGCCTGGTGTTAGATTGGTTTGCCAGTTTCCGGGATGTTCGATTAGTGTCAATATCTCCGGCAATTTCTCATTGGCTGAGAATTCTTCGGTTATCGCCGGGACTTTCCGTCTCGCGGCGGAAAACGCTGAATTTGGGCTAAGCTCGGCCGTTGATACCACTGGATTGGCTGGAGAACCTCCGCCGGATACTAGCGGTACGCCGGAGGGAGTGGAAGGTGCCGGTGGTGGATACGGTGGAAGAGGTGCATGTTGTTTGTCGGATACTACTACGAAGATTCCGGAAGATGTGTTCGGTGGTGATGTTTATGGTTGGTCGTCTTTGGAGAAGCCGGAGATTTATGGCAGTAGAGGTGGTTCGACGAGTAATGAGGTTGATTACGGTGGAGGTGGCGGCGGAACGGTGGCGATAGAGATATTAGGGTATATTAGTTTAAACGGCAGCGTTTTAGCTGATGGGGCCAGTGGTGGTGTTAAAGGTGGTGGTGGGTCCGGCGGCAGCATCTTCGTAATGGCTCATAAAATGGCAGGAAATGGTCGTTTAAGTGCATCTGGAGGTGATGGGTATGCTGGTGGAGGTGGTGGACGGGTATCCGTCGATATATACAGCCGCCATTCTGATCCAAAAATCTTTTTCAATGGAGGTCGTAGTTTTGGTTGTCCAGAAAATGCTGGAGCTGCTGGGACTCTGTATGATGTTATTTCAGAGAGCTTAACCATTGACAACCACAATAAGACAACATATACAGACACTCTTCTCCTGGAGTTCCCTAACCACCGCCTTTTCACTAATTTGTATATCCGGAATATGGCAAAGGTTGCTGTTCCCTTGCGTTGGAGCCGTGTTCAGGTTCAAGGATTGATAAGTTTGTCAAATGGTGGAGAGTTGAACTTTGGTCTTCCACGTTATGCTTCCTCTGAATTTGAATTATTTGCTGAGGAACTCTTGATGAGTAATTCTGCAATCAAGGTTTACGGGGCTTTACGTATGACAGTCAAGGTGTTCTTGATGTTGAAGTCAAGAATGTTTATAGATGGCGGTGGTGTGACAATATTGGGAACTTCAATGCTTGAAATTAGTAATCTGTTGGTGCTCAAGGAGTCATCTGTGATACAATCCAATGGAAACCTCGGAGTACATGGGCAGGGCCTGTTGAATCTAACAGGCACAGGAGATACAATTGAAGCACAGCGTCTGATTTTGTCTCTATTTTATAGCATCCAGGTTGGAGCCGGAGCGGTTTTGCGTGGTCCTTTGCAGAATGCATCAACTGGTGGCCTTACTCCAAAGCTTTACTGTCAACGCCAAGATTGCCCTGTTGAACTACTCCACCCACCGGAGGATTGCAATGTCAATTCATCCCTTCCATTCACTCTTCAGATCTGCCGAGTTGAGGATATTACTGTTGAAGGTCTCATTAAAGGATCTGTAATCCAATTCCATCTGGCAAGAACGGTACTTGTCCGCTCTTCTGGAACAATATCCGCGGACGGGATGGGCTGCAAAGGTGGAGTTGGGACAGGTAGGTTTCTGAGAAGCGGTATTGGGAGTGGTGGTGGACATGGTGGTAAAGGCGGAAGCGGATGTTACAATCATACTTGCATTGAGGGTGGCGAGTCTTATGGAAATGCAGACCTACCATGTGAACTTGGCAGCGGAAGTGGAAATGAAGAGTCAACGGATTCAGTTGCTGGGGGAGGAATCATTGTGCTTGGTTCACTTGAGCACCCACTTTCAAGCTTGTCACTGGAAGGCTCAATAACAACTGATGGCGAAAGTCCCAGGAAGACGCTGAAAGGCCTAAGTAATTCAAGTCTAGGACCTGGTGGTGGTTCAGGTGGAACCGTACTTTTATTCTTGCGCACACTTGAGATAGGGAGGTCTGCGATTCTCTCTAGTATTGGAGGAAATGGTAGCCTGAAGGGAGGTGGAGGAGGAAGTGGTGGAAGGATTCATTTTCATTGGTCAGACATTCCCACTGGTGATGTCTATCATCCCGTTGCCATAGTTAAGGGAAGAGTTTATGTAAGAGGAGGGATGGGTATCATTGAAGATAATATTGGAGGGAATGGAACTTTGACTGGCAAAGCTTGTCCAGAAGGGCTCTATGGTTTATTTTGCGAGGAATGTCCATCTGGCACTTATAAGAACGTTACTGGATCTGATAAAGCTCTTTGTCATCTTTGTCCGGCTAATGATATTCCCCATCGTGCTGTATATGTCACTGTTCGAGGTGGTGTTGCAGAAACGCCTTGTCCATATAAATGCATTTCGGATAGATACCACATGCCACACTGTTATACTACGCTTGAAGAGTTAATATACACATTTGGTGGACCCTGGCTGTTTGGTGTTCTTTTAGTAGTTGTGCTCCTCCTACTAGCACTTGTTTTCAGCGTCGCCAGAATGAAATTTGTGAGCGGTGACGAATTGCATGGGTCTGCCCCGACCCAGCATGGCTCTCAGATTGATCACTCATTTCCATTCCTCGAGTCGTTGAATGAGGTGATGGAGACGAGCAGAGTGGAGGAGTCACAGGGCCACATGCATAGGATCTATTTCTTAGGTCCTAATACTTTCAGTGAACCTTGGCATCTTTCTCATACACCCCCAGAGGAAATAAAAGAGATTGTGTACGAGGCTGCGTTTAATGGGTTTGTTGATGAAGTCAATGTTATAGCTGCATATCAGTGGTGGGAGGGTGCGATTTACATTATGCTTTCAGTTCTAGTCTATCCTCTTGCATGGTCATGGCAGCAATCACGCCGGAGGCTGAAATTTCAGAAACTCCGTGACTTTGTTAGATCAGAATATGACCATTCTTGTCTACGCTCGTGTCGTTCAAGGGCATTATATGAAGGGCTAAAGGTAGCTGCTACTCCTGATTTGATGTTAGCTCATCTAGATTTCTTCCTTGGTGGCGATGAAAAGAGAAGCGATCTTCCTCCTCAGGTTCATCAAAGACTTCCAATGCCTTTAATATTTGGAGGCGACGGAAGTTACATGGCCTATTACTCACTCCAAAGTGACGATATTCTGACCAGTCTTCTGAGCCAGTTGGTCCCACCAACCACTTGGTACCGCTTTGTCGCTGGTCTGAACGCTCAGCTACGTCTGGTTCAGCAAGGGAAACTGAGGTCCACGTTTCGCTCTGTTATGAGATGGATTGAAACTCATGGAAACCCTGCTTTGAAAAGACATGGTGTACGTGTTGACCTAGCTAGGTTTCAGGCATTGTCTTCGTCGTCTTGCCAGTATGGAATCCTTGTTCACACCATTGCAGATGAAGTCGCATCAACAAGAAGTGATGATGAAACAGAACAGCAGCATCCATGGGGGACACAAATTGAAAATCACTCTGGTGATTTCAGGGAGAATTTTCAACCTCTAAGAAGCGAAATCAACCACGTGAGGCATCAAGAGTGTGGAGAAATCATAGACATTGGAAGCTTACAATTTCTTAAAGAAGAAAAAGATGTCCTTTCCCTCATCTCCTTCTTGATTCATAACACAAAACCTGTTGGTCATCAGGATCTGGTCGGTTTGGTTATCTCGGTGCTACTCCTAGGAGATTTAACTCTAACGTTACTCACACTACTCCAACTCTACTCGATATCATTGCTGGAAGTCTTTCTCGCTATGTTTATTTTACCTCTCAGCATCATTTTTCCATTCCCTGCTGGGGTCAGCGCTTTGTTTAGCCACGGACCAAGGCGCTCTGCTAGTCGCACACGCGTTTATGCATTGTGGAATGTCACATCCTTGGTCAATGTCGTTGTGGCATTTGTGTGTGGATATGTTCACTATCATGGCTCATCATCTGGGAAAAAGATCCCGTATCTCCAGCCATGGAACATTAGCATGGACGAGAACGAATGGTGGATATTCCCAGTCGCTTTGTTTCTATGCAAAGTCTTGCAATCCCAACTCGTAAACTGGCACGTTGCAAACCTCGAGATACAAGATTACTCCTTGTACAGCGATGATTCCGAGCTGTTCTGGCAGTCGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1432

Amino Acids

153.99

Weight (kDa)

5.59

Isoelectric Point (pI)

44.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF8003 PF26010 790 - 863 1.5e-35 Domain of unknown function (DUF8003)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2433
Acc16I TGCGCA 1 cut(s) 2150
Acc65I GGTACC 1 cut(s) 3366
AccB1I GGYRCC 3 cut(s) 136, 506, 3366
AccBSI CCGCTC 3 cut(s) 1526, 1755, 2709
AccI GTMKAC 1 cut(s) 3115
AccII CGCG 4 cut(s) 47, 404, 1775, 4023
AccIII TCCGGA 2 cut(s) 568, 1089
AclI AACGTT 2 cut(s) 2439, 3872
AclWI GGATC 6 cut(s) 902, 1720, 2455, 2849, 3828, 4114
AcoI YGGCCR 1 cut(s) 435
AcsI RAATTY 6 cut(s) 370, 419, 1208, 2699, 3065, 3664
AcuI CTGAAG 2 cut(s) 1649, 2228
AcvI CACGTG 3 cut(s) 219, 251, 3697
AcyI GRCGYC 1 cut(s) 137
AfaI GTAC 8 cut(s) 487, 1425, 1746, 2136, 2924, 3368, 3495, 4265
AfeI AGCGCT 1 cut(s) 3979
AflIII ACRYGT 4 cut(s) 218, 248, 3496, 4021
AgeI ACCGGT 1 cut(s) 266
AhdI GACNNNNNGTC 1 cut(s) 396
AjnI CCWGG 6 cut(s) 292, 1047, 1509, 2069, 2110, 2627
AjuI GAANNNNNNNTTGG 2 cut(s) 2331, 2363
AleI CACNNNNGTG 1 cut(s) 3648
AloI GAACNNNNNNTCC 4 cut(s) 563, 595, 3540, 3572
Alw21I GWGCWC 3 cut(s) 1383, 2016, 2661
Alw26I GTCTC 6 cut(s) 41, 92, 404, 1497, 1706, 2795
AlwI GGATC 6 cut(s) 902, 1720, 2455, 2849, 3828, 4114
AlwNI CAGNNNCTG 4 cut(s) 1438, 1483, 1979, 3823
Ama87I CYCGRG 2 cut(s) 2777, 4241
Aor13HI TCCGGA 2 cut(s) 568, 1089
Aor51HI AGCGCT 1 cut(s) 3979
AoxI GGCC 7 cut(s) 435, 747, 1435, 1564, 2086, 2827, 3294
ApoI RAATTY 6 cut(s) 370, 419, 1208, 2699, 3065, 3664
AseI ATTAAT 1 cut(s) 80
AsiGI ACCGGT 1 cut(s) 266
Asp700I GAANNNNTTC 1 cut(s) 3918
Asp718I GGTACC 1 cut(s) 3366
AspA2I CCTAGG 2 cut(s) 190, 3853
AspLEI GCGC 4 cut(s) 139, 2151, 3980, 4005
AsuC2I CCSGG 3 cut(s) 152, 321, 388
AsuHPI GGTGA 9 cut(s) 37, 117, 256, 599, 857, 2282, 2723, 2806, 3662
AsuII TTCGAA 1 cut(s) 114
AvaI CYCGRG 2 cut(s) 2777, 4241
AvaII GGWCC 8 cut(s) 777, 1538, 2108, 2624, 2855, 3349, 3426, 3995
AvrII CCTAGG 2 cut(s) 190, 3853
AxyI CCTNAGG 1 cut(s) 3237
BanI GGYRCC 3 cut(s) 136, 506, 3366
BanII GRGCYC 1 cut(s) 2394
BauI CACGAG 1 cut(s) 3121
BbrPI CACGTG 3 cut(s) 219, 251, 3697
BbsI GAAGAC 4 cut(s) 1178, 2081, 3326, 3519
Bbv12I GWGCWC 3 cut(s) 1383, 2016, 2661
BbvCI CCTCAGC 1 cut(s) 1224
BceAI ACGGC 3 cut(s) 422, 742, 1113
BcgI CGANNNNNNTGC 6 cut(s) 775, 809, 3510, 3544, 3889, 3923
BciT130I CCWGG 6 cut(s) 294, 1049, 1511, 2071, 2112, 2629
BciVI GTATCC 4 cut(s) 469, 512, 544, 889
BclI TGATCA 1 cut(s) 2758
BcnI CCSGG 3 cut(s) 152, 321, 388
BcoDI GTCTC 6 cut(s) 41, 92, 404, 1497, 1706, 2795
BfoI RGCGCY 3 cut(s) 140, 3981, 4006
BfuI GTATCC 4 cut(s) 469, 512, 544, 889
BglII AGATCT 1 cut(s) 1668
BlnI CCTAGG 2 cut(s) 190, 3853
BlpI GCTNAGC 2 cut(s) 428, 3393
Bme1390I CCNGG 9 cut(s) 152, 294, 321, 388, 1049, 1511, 2071, 2112, 2629
Bme18I GGWCC 8 cut(s) 777, 1538, 2108, 2624, 2855, 3349, 3426, 3995
BmeRI GACNNNNNGTC 1 cut(s) 396
BmeT110I CYCGRG 2 cut(s) 2777, 4241
BmrFI CCNGG 9 cut(s) 152, 294, 321, 388, 1049, 1511, 2071, 2112, 2629
BmrI ACTGGG 1 cut(s) 4172
BmsI GCATC 9 cut(s) 798, 845, 1515, 1562, 2890, 3590, 3625, 3712, 3957
BmuI ACTGGG 1 cut(s) 4172
BpiI GAAGAC 4 cut(s) 1178, 2081, 3326, 3519
BpmI CTGGAG 5 cut(s) 480, 861, 981, 1070, 4115
Bpu10I CCTNAGC 1 cut(s) 1224
Bpu1102I GCTNAGC 2 cut(s) 428, 3393
Bpu14I TTCGAA 1 cut(s) 114
BpuEI CTTGAG 3 cut(s) 1367, 2030, 2177
BpuMI CCSGG 3 cut(s) 152, 321, 388
BsaAI YACGTR 5 cut(s) 219, 251, 1274, 3497, 3697
BsaBI GATNNNNATC 3 cut(s) 240, 2277, 2330
BsaHI GRCGYC 1 cut(s) 137
BsaI GGTCTC 1 cut(s) 1706
BsaWI WCCGGW 4 cut(s) 266, 568, 1089, 1624
BsaXI ACNNNNNCTCC 2 cut(s) 1828, 1858
Bse118I RCCGGY 2 cut(s) 266, 509
Bse21I CCTNAGG 1 cut(s) 3237
Bse3DI GCAATG 3 cut(s) 1642, 3564, 3905
Bse8I GATNNNNATC 3 cut(s) 240, 2277, 2330
BseAI TCCGGA 2 cut(s) 568, 1089
BseBI CCWGG 6 cut(s) 294, 1049, 1511, 2071, 2112, 2629
BseJI GATNNNNATC 3 cut(s) 240, 2277, 2330
BseMI GCAATG 3 cut(s) 1642, 3564, 3905
BseMII CTCAG 9 cut(s) 357, 1215, 1811, 2765, 3251, 3329, 3407, 3413, 3958
BseRI GAGGAG 5 cut(s) 2235, 2334, 2651, 2831, 3225
BseX3I CGGCCG 1 cut(s) 435
BseYI CCCAGC 4 cut(s) 968, 1979, 2739, 3968
Bsh1236I CGCG 4 cut(s) 47, 404, 1775, 4023
Bsh1285I CGRYCG 1 cut(s) 438
BshFI GGCC 7 cut(s) 437, 749, 1437, 1566, 2088, 2829, 3296
BshNI GGYRCC 3 cut(s) 136, 506, 3366
BshTI ACCGGT 1 cut(s) 266
BsiEI CGRYCG 1 cut(s) 438
BsiHKAI GWGCWC 3 cut(s) 1383, 2016, 2661
BsiHKCI CYCGRG 2 cut(s) 2777, 4241
BslFI GGGAC 6 cut(s) 403, 985, 1819, 2052, 3335, 3640
BsmAI GTCTC 6 cut(s) 41, 92, 404, 1497, 1706, 2795
BsmBI CGTCTC 2 cut(s) 404, 2795
BsmFI GGGAC 6 cut(s) 403, 985, 1819, 2052, 3335, 3640
BsmI GAATGC 1 cut(s) 1555
BsnI GGCC 7 cut(s) 437, 749, 1437, 1566, 2088, 2829, 3296
Bso31I GGTCTC 1 cut(s) 1706
BsoBI CYCGRG 2 cut(s) 2777, 4241
Bsp119I TTCGAA 1 cut(s) 114
Bsp1286I GDGCHC 4 cut(s) 1383, 2016, 2394, 2661
Bsp13I TCCGGA 2 cut(s) 568, 1089
Bsp1407I TGTACA 1 cut(s) 4263
Bsp1720I GCTNAGC 2 cut(s) 428, 3393
Bsp19I CCATGG 2 cut(s) 3620, 4136
BspANI GGCC 7 cut(s) 437, 749, 1437, 1566, 2088, 2829, 3296
BspCNI CTCAG 9 cut(s) 358, 1216, 1812, 2764, 3250, 3330, 3406, 3414, 3957
BspEI TCCGGA 2 cut(s) 568, 1089
BspFNI CGCG 4 cut(s) 47, 404, 1775, 4023
BspPI GGATC 6 cut(s) 902, 1720, 2455, 2849, 3828, 4114
BspQI GCTCTTC 1 cut(s) 1762
BspT104I TTCGAA 1 cut(s) 114
BspT107I GGYRCC 3 cut(s) 136, 506, 3366
BspTNI GGTCTC 1 cut(s) 1706
BsrBI CCGCTC 3 cut(s) 1526, 1755, 2709
BsrDI GCAATG 3 cut(s) 1642, 3564, 3905
BsrFI RCCGGY 2 cut(s) 266, 509
BsrGI TGTACA 1 cut(s) 4263
BssAI RCCGGY 2 cut(s) 266, 509
BssNI GRCGYC 1 cut(s) 137
BssSI CACGAG 1 cut(s) 3121
BssT1I CCWWGG 8 cut(s) 190, 2876, 3202, 3620, 3853, 3998, 4050, 4136
Bst2BI CACGAG 1 cut(s) 3121
Bst2UI CCWGG 6 cut(s) 294, 1049, 1511, 2071, 2112, 2629
Bst6I CTCTTC 7 cut(s) 523, 1047, 1668, 1762, 1953, 2299, 2595
BstACI GRCGYC 1 cut(s) 137
BstAPI GCANNNNNTGC 1 cut(s) 1106
BstAUI TGTACA 1 cut(s) 4263
BstBAI YACGTR 5 cut(s) 219, 251, 1274, 3497, 3697
BstBI TTCGAA 1 cut(s) 114
BstDSI CCRYGG 4 cut(s) 1773, 3620, 3991, 4136
BstFNI CGCG 4 cut(s) 47, 404, 1775, 4023
BstH2I RGCGCY 3 cut(s) 140, 3981, 4006
BstHHI GCGC 4 cut(s) 139, 2151, 3980, 4005
BstMAI GTCTC 6 cut(s) 41, 92, 404, 1497, 1706, 2795
BstMCI CGRYCG 1 cut(s) 438
BstMWI GCNNNNNNNGC 6 cut(s) 413, 746, 965, 1106, 1599, 4288
BstNI CCWGG 6 cut(s) 294, 1049, 1511, 2071, 2112, 2629
BstNSI RCATGY 3 cut(s) 540, 2578, 2836
BstSCI CCNGG 9 cut(s) 150, 292, 319, 386, 1047, 1509, 2069, 2110, 2627
BstSNI TACGTA 1 cut(s) 1274
BstUI CGCG 4 cut(s) 47, 404, 1775, 4023
BstV2I GAAGAC 4 cut(s) 1178, 2081, 3326, 3519
BstX2I RGATCY 6 cut(s) 1668, 1712, 2447, 2841, 3820, 4119
BstXI CCANNNNNNTGG 2 cut(s) 454, 3363
BstYI RGATCY 6 cut(s) 1668, 1712, 2447, 2841, 3820, 4119
BstZI CGGCCG 1 cut(s) 435
Bsu36I CCTNAGG 1 cut(s) 3237
BsuI GTATCC 4 cut(s) 469, 512, 544, 889
BsuRI GGCC 7 cut(s) 437, 749, 1437, 1566, 2088, 2829, 3296
BtgI CCRYGG 4 cut(s) 1773, 3620, 3991, 4136
BtgZI GCGATG 2 cut(s) 3225, 4284
BtsIMutI CAGTG 9 cut(s) 119, 447, 757, 2033, 2265, 2511, 2581, 2875, 2984
CaiI CAGNNNCTG 4 cut(s) 1438, 1483, 1979, 3823
CfoI GCGC 4 cut(s) 139, 2151, 3980, 4005
Cfr10I RCCGGY 2 cut(s) 266, 509
Cfr42I CCGCGG 1 cut(s) 1776
CseI GACGC 3 cut(s) 1469, 2086, 2674
CsiI ACCWGGT 1 cut(s) 2110
Csp6I GTAC 8 cut(s) 486, 1424, 1745, 2135, 2923, 3367, 3494, 4264
CspAI ACCGGT 1 cut(s) 266
CviQI GTAC 8 cut(s) 486, 1424, 1745, 2135, 2923, 3367, 3494, 4264
DinI GGCGCC 1 cut(s) 138
DraI TTTAAA 1 cut(s) 723
DriI GACNNNNNGTC 1 cut(s) 396
EaeI YGGCCR 1 cut(s) 435
EagI CGGCCG 1 cut(s) 435
Eam1104I CTCTTC 7 cut(s) 523, 1047, 1668, 1762, 1953, 2299, 2595
Eam1105I GACNNNNNGTC 1 cut(s) 396
EarI CTCTTC 7 cut(s) 523, 1047, 1668, 1762, 1953, 2299, 2595
EciI GGCGGA 4 cut(s) 422, 459, 699, 1878
EclXI CGGCCG 1 cut(s) 435
Eco105I TACGTA 1 cut(s) 1274
Eco130I CCWWGG 8 cut(s) 190, 2876, 3202, 3620, 3853, 3998, 4050, 4136
Eco147I AGGCCT 1 cut(s) 2088
Eco24I GRGCYC 1 cut(s) 2394
Eco31I GGTCTC 1 cut(s) 1706
Eco32I GATATC 1 cut(s) 3903
Eco47I GGWCC 8 cut(s) 777, 1538, 2108, 2624, 2855, 3349, 3426, 3995
Eco47III AGCGCT 1 cut(s) 3979
Eco52I CGGCCG 1 cut(s) 435
Eco57I CTGAAG 2 cut(s) 1649, 2228
Eco72I CACGTG 3 cut(s) 219, 251, 3697
Eco81I CCTNAGG 1 cut(s) 3237
Eco88I CYCGRG 2 cut(s) 2777, 4241
EcoO109I RGGNCCY 3 cut(s) 1435, 2108, 2855
EcoRI GAATTC 1 cut(s) 370
EcoRII CCWGG 6 cut(s) 292, 1047, 1509, 2069, 2110, 2627
EcoRV GATATC 1 cut(s) 3903
EcoT14I CCWWGG 8 cut(s) 190, 2876, 3202, 3620, 3853, 3998, 4050, 4136
EcoT22I ATGCAT 4 cut(s) 1555, 2558, 2838, 4033
EcoT38I GRGCYC 1 cut(s) 2394
EgeI GGCGCC 1 cut(s) 138
EheI GGCGCC 1 cut(s) 138
ErhI CCWWGG 8 cut(s) 190, 2876, 3202, 3620, 3853, 3998, 4050, 4136
Esp3I CGTCTC 2 cut(s) 404, 2795
FalI AAGNNNNNCTT 4 cut(s) 1277, 1309, 3753, 3785
FaqI GGGAC 6 cut(s) 403, 985, 1819, 2052, 3335, 3640
FbaI TGATCA 1 cut(s) 2758
FblI GTMKAC 1 cut(s) 3115
FriOI GRGCYC 1 cut(s) 2394
FspI TGCGCA 1 cut(s) 2150
GlaI GCGC 4 cut(s) 138, 2150, 3979, 4004
GsaI CCCAGC 4 cut(s) 972, 1983, 2743, 3972
GsuI CTGGAG 5 cut(s) 480, 861, 981, 1070, 4115
HaeII RGCGCY 3 cut(s) 140, 3981, 4006
HaeIII GGCC 7 cut(s) 437, 749, 1437, 1566, 2088, 2829, 3296
HgaI GACGC 3 cut(s) 1469, 2086, 2674
HhaI GCGC 4 cut(s) 139, 2151, 3980, 4005
Hin1I GRCGYC 1 cut(s) 137
Hin6I GCGC 4 cut(s) 137, 2149, 3978, 4003
HinP1I GCGC 4 cut(s) 137, 2149, 3978, 4003
HincII GTYRAC 3 cut(s) 1589, 1965, 3502
HindII GTYRAC 3 cut(s) 1589, 1965, 3502
HindIII AAGCTT 4 cut(s) 1577, 2026, 2376, 3736
HphI GGTGA 9 cut(s) 37, 117, 256, 599, 857, 2282, 2723, 2806, 3662
Hpy99I CGWCG 7 cut(s) 172, 233, 652, 887, 2690, 3284, 3535
HpyF10VI GCNNNNNNNGC 6 cut(s) 413, 746, 965, 1106, 1599, 4288
Hsp92I GRCGYC 1 cut(s) 137
HspAI GCGC 4 cut(s) 137, 2149, 3978, 4003
KasI GGCGCC 1 cut(s) 136
Kpn2I TCCGGA 2 cut(s) 568, 1089
KpnI GGTACC 1 cut(s) 3370
Ksp22I TGATCA 1 cut(s) 2758
KspI CCGCGG 1 cut(s) 1776
LguI GCTCTTC 1 cut(s) 1762
LmnI GCTCC 6 cut(s) 142, 962, 1125, 1517, 1523, 2664
LweI GCATC 9 cut(s) 798, 845, 1515, 1562, 2890, 3590, 3625, 3712, 3957
MabI ACCWGGT 1 cut(s) 2110
MbiI CCGCTC 3 cut(s) 1526, 1755, 2709
MfeI CAATTG 1 cut(s) 1467
MflI RGATCY 6 cut(s) 1668, 1712, 2447, 2841, 3820, 4119
MhlI GDGCHC 4 cut(s) 1383, 2016, 2394, 2661
MluI ACGCGT 1 cut(s) 4021
Mly113I GGCGCC 1 cut(s) 137
MlyI GAGTC 6 cut(s) 967, 1397, 1913, 1970, 2789, 2828
MmeI TCCRAC 4 cut(s) 528, 1103, 1495, 3913
Mph1103I ATGCAT 4 cut(s) 1555, 2558, 2838, 4033
MroI TCCGGA 2 cut(s) 568, 1089
MroXI GAANNNNTTC 1 cut(s) 3918
MslI CAYNNNNRTG 7 cut(s) 2551, 2977, 3037, 3648, 4075, 4095, 4148
MspA1I CMGCKG 2 cut(s) 1775, 1944
MspR9I CCNGG 9 cut(s) 152, 294, 321, 388, 1049, 1511, 2071, 2112, 2629
MssI GTTTAAAC 1 cut(s) 723
MunI CAATTG 1 cut(s) 1467
Mva1269I GAATGC 1 cut(s) 1555
MvaI CCWGG 6 cut(s) 294, 1049, 1511, 2071, 2112, 2629
MvnI CGCG 4 cut(s) 47, 404, 1775, 4023
MwoI GCNNNNNNNGC 6 cut(s) 413, 746, 965, 1106, 1599, 4288
NarI GGCGCC 1 cut(s) 137
NciI CCSGG 3 cut(s) 152, 321, 388
NcoI CCATGG 2 cut(s) 3620, 4136
NmeAIII GCCGAG 2 cut(s) 413, 1700
NsbI TGCGCA 1 cut(s) 2150
NsiI ATGCAT 4 cut(s) 1555, 2558, 2838, 4033
NspI RCATGY 3 cut(s) 540, 2578, 2836
NspV TTCGAA 1 cut(s) 114
OliI CACNNNNGTG 1 cut(s) 3648
PaeR7I CTCGAG 2 cut(s) 2777, 4241
PceI AGGCCT 1 cut(s) 2088
PciSI GCTCTTC 1 cut(s) 1762
PcsI WCGNNNNNNNCGW 2 cut(s) 57, 3124
PctI GAATGC 1 cut(s) 1555
PdmI GAANNNNTTC 1 cut(s) 3918
PfoI TCCNGGA 2 cut(s) 319, 1047
PinAI ACCGGT 1 cut(s) 266
PleI GAGTC 6 cut(s) 967, 1396, 1912, 1969, 2788, 2827
PluTI GGCGCC 1 cut(s) 140
PmaCI CACGTG 3 cut(s) 219, 251, 3697
PmeI GTTTAAAC 1 cut(s) 723
PmlI CACGTG 3 cut(s) 219, 251, 3697
PpsI GAGTC 6 cut(s) 967, 1396, 1912, 1969, 2788, 2827
Ppu21I YACGTR 5 cut(s) 219, 251, 1274, 3497, 3697
PpuMI RGGWCCY 2 cut(s) 2108, 2855
PshBI ATTAAT 1 cut(s) 80
PsiI TTATAA 1 cut(s) 2433
Psp1406I AACGTT 2 cut(s) 2439, 3872
Psp5II RGGWCCY 2 cut(s) 2108, 2855
Psp6I CCWGG 6 cut(s) 292, 1047, 1509, 2069, 2110, 2627
PspCI CACGTG 3 cut(s) 219, 251, 3697
PspFI CCCAGC 4 cut(s) 968, 1979, 2739, 3968
PspGI CCWGG 6 cut(s) 292, 1047, 1509, 2069, 2110, 2627
PspPPI RGGWCCY 2 cut(s) 2108, 2855
PspXI VCTCGAGB 1 cut(s) 2777
PsrI GAACNNNNNNTAC 2 cut(s) 628, 660
PstNI CAGNNNCTG 4 cut(s) 1438, 1483, 1979, 3823
PsuI RGATCY 6 cut(s) 1668, 1712, 2447, 2841, 3820, 4119
RsaI GTAC 8 cut(s) 487, 1425, 1746, 2136, 2924, 3368, 3495, 4265
RsaNI GTAC 8 cut(s) 486, 1424, 1745, 2135, 2923, 3367, 3494, 4264
RseI CAYNNNNRTG 7 cut(s) 2551, 2977, 3037, 3648, 4075, 4095, 4148
SacII CCGCGG 1 cut(s) 1776
SapI GCTCTTC 1 cut(s) 1762
SchI GAGTC 6 cut(s) 967, 1397, 1913, 1970, 2789, 2828
ScrFI CCNGG 9 cut(s) 152, 294, 321, 388, 1049, 1511, 2071, 2112, 2629
SduI GDGCHC 4 cut(s) 1383, 2016, 2394, 2661
SexAI ACCWGGT 1 cut(s) 2110
SfaNI GCATC 9 cut(s) 798, 845, 1515, 1562, 2890, 3590, 3625, 3712, 3957
SfoI GGCGCC 1 cut(s) 138
Sfr274I CTCGAG 2 cut(s) 2777, 4241
Sfr303I CCGCGG 1 cut(s) 1776
SfuI TTCGAA 1 cut(s) 114
SgrBI CCGCGG 1 cut(s) 1776
SinI GGWCC 8 cut(s) 777, 1538, 2108, 2624, 2855, 3349, 3426, 3995
SlaI CTCGAG 2 cut(s) 2777, 4241
SmiMI CAYNNNNRTG 7 cut(s) 2551, 2977, 3037, 3648, 4075, 4095, 4148
SmlI CTYRAG 5 cut(s) 1382, 2009, 2156, 2777, 4241
SmoI CTYRAG 5 cut(s) 1382, 2009, 2156, 2777, 4241
SnaBI TACGTA 1 cut(s) 1274
SseBI AGGCCT 1 cut(s) 2088
SspDI GGCGCC 1 cut(s) 136
SspI AATATT 3 cut(s) 1341, 2347, 3270
StuI AGGCCT 1 cut(s) 2088
StyD4I CCNGG 9 cut(s) 150, 292, 319, 386, 1047, 1509, 2069, 2110, 2627
StyI CCWWGG 8 cut(s) 190, 2876, 3202, 3620, 3853, 3998, 4050, 4136
TatI WGTACW 2 cut(s) 1423, 4263
TauI GCSGC 4 cut(s) 407, 684, 786, 900
TscAI CASTG 9 cut(s) 126, 454, 757, 2040, 2272, 2518, 2588, 2875, 2984
TspGWI ACGGA 6 cut(s) 386, 871, 1982, 3068, 3297, 4008
TspRI CASTG 9 cut(s) 126, 454, 757, 2040, 2272, 2518, 2588, 2875, 2984
VpaK11BI GGWCC 8 cut(s) 777, 1538, 2108, 2624, 2855, 3349, 3426, 3995
VspI ATTAAT 1 cut(s) 80
XapI RAATTY 6 cut(s) 370, 419, 1208, 2699, 3065, 3664
XbaI TCTAGA 1 cut(s) 3190
XceI RCATGY 3 cut(s) 540, 2578, 2836
XcmI CCANNNNNNNNNTGG 2 cut(s) 290, 3360
XhoI CTCGAG 2 cut(s) 2777, 4241
XmaJI CCTAGG 2 cut(s) 190, 3853
XmiI GTMKAC 1 cut(s) 3115
XmnI GAANNNNTTC 1 cut(s) 3918
Zsp2I ATGCAT 4 cut(s) 1555, 2558, 2838, 4033
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.