Rroxscaffold_2G00149210

No description available

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
Physical Location & Seq
Forward (+)
86856482 .. 86871284
14803 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00149210.1

Sequence Viewer

Length: 5475 bp
ATGGTTCCTTTTGCCTCAGTTCTCTACCACCTTTGCATTCTCAGCCTCTTCACCATAAACCCTACTCTCTCCACTGATTTGGGCAATGAATTCTCAATCCTTAGCTTCGATTCCGATGACTTTCGTGGAGACTACGCGCCTCCATCGCCACCGCCGAGTCCGCCGGAGCCTCAGCCGCCCTCACTCTCCTGCAGAGAGGGTCTCAATGCAACTGGGTCTTTCGACACCATTTGTGAGCTCAATTCAAGCTTGAGTCTTGAAAATGATGTGTATATACATGGAAATGGGAGCTTTTATATCCTCCCTGGTGTTAATGTGAGCTGCCCACATTTGGGGTGCTCCATTGTGGTTAATATTAGTGGAGATTTTAGTTTAGGTAGCAATTCATTGATTATTGCCGGGTTAGTTTCGGTTAATGCTTCCAATGTTAGCTTGTTTACTGGTTCAGTGATTAATGTGACTGGGATGGCTGGGGCTCCGCCTCCAATGACTAGTGGCACACCAGGGGGTGAGCAGGGTGCTGGTGGAGGTCATGGTGGGAGAGGAGCTAGTTGTGTCACAGATAACAAGAAGCTCCCGGATGATATTTGGGGTGGGGATCCATATGCTTGGTCATCGTTGGAGGAGCCGAAAAGTTATGGGAGTAAGGGTGGGAGTACTAGTAAGGAAGTGAAGTACGGTGGGGAAGGAGGTGGAAGGATTTGGTTGGAGACGAGAAACTCGATTGTTGTTGGGGGGAGTGTTTTGGCTGATGGTGGTGATGGTGGTATCAAGGGTGGAGGAGGGTCAGGAGGCAGCATATACGTCAAAGGTCTTAGAATGACTGGAAGTGGCATGATAAGTGCAATTGGGGGTAATGGATTTGCTGGAGGTGGAGGTGGAAGAATTTCTATCAATGTTTTCAGCAGGCGTGATGAACCAGAAATCTTCAGTCATGGGGGAAGGAGTTTAGGCTGTCCTGAAAATGCAGGTGCTGCAGGGACATATTATGATGCTGTCCCTCGAAGGCTTATAGTCAGTAATCATAACTTGTCCACACGGACTGACACGCTTCTGTTGGAGTTTCCTAAACTGCCCCTCTGGACAAATGTTGATATACAAGATCATGCCAAGGCTCTGGTTCCTCTGTTTTGGAGCCGTGTTCAGGTTAGAGGTCAAATTCGTTTATCATGTGGTGCAGTTTTGAGTTTTGGTCTTCAACATTTTGCTTCATCGGAGTTTGAGTTAATGGCAGAAGAGCTTGTAATGAGTGATTCTATCGTCAAGGCAAGTATATTTGGGGCTCTTCGAATGTCTGTGAAAATGCACTTGATGTGGAATTCCAAAATGCTTATAGAGGGTGGTGTTGATGCACTTGTGGCAACATCCTTGCTTGAAGCAACCAATTTAATGGTTCTCAGGGAGTCCTCAGTGATACATTCTACTGCGAATTTGGGAGTTCATGGACAAGGTTTCTTGAATTTGACTGGGCCAGGAGATGCTATTGAAGCAAAACACCTGGTTGGACCTGGATCTTTTCTGCGAGGGCCTTTGGATCGCAGCAGTAGTAACTTTACGACACCCCAACTCAACTGTGAGCTCCCAAATTGCCCTGTGGAATTACTTCATCCACCTGAAGATTGTAACATGAACTCTACATTGACCTTCACTCTTCAGATTTGTCGAGTTGAATATGTTATTGTTGAAGGCATTGTAACTGGATCTGTTATACATTTTCACTGGGTGAGAGATGTAGTTGTACACTCTTCTGGGGTAATTACTGCATCTGGTCTGGGTTGCACTGGTGGGCTGGGTAGAGGAAGATTTTTTGTAAATGGTCTTGGCAGCGGTGGCGGGCATGGAGGCAAAGGTGGAGATGGGTTTTACGACGGAAATTTTATTGAAGGTGGCGTTTCCTATGGAAATGCTGATTTACCTTGTGAACTTGGTAGTGGTAGTGGAAATGATAGTCTAGCTGGTGCAACAGCAGGTGGTGGTATTATTGTAATGGGTTCATTGGAACGCTCATTGTCTAGTTTCACTCTTGCGGGCTCTCTTAGAGCTGATGGAGAAACCTTTGGAGAAAATTTTGGGGAGAAAGTTGGTCAGACCATTTCAAATATAGGTCCTGGCGGTGGATCCGGTGGAACCATTCTTTTGTTTGTTCAGACATTAGCACTCAGTGATTCTTCTACAATCTCAACTGTTGGTGGGCATGGTAGTCCTAGTGGTGGCGGTGGAGGAGGTGGTGGGAGGATTCACTTCCATTGGTCGGACATACCAGTTGGGGATGCATATCTACCCATAGCAAGCGTGCGAGGAAACATTAATACTGGGGGAGGATTCGGTAGAGGAAATGGGCGTGCTGGACAAAATGGGACTATCACTGGAAGGGCCTGTCCCAGAGGGTTATATGGTATCTTTTGTGAGGAATGCCCTCTTGGCACCTTTAAGAATGTCAGTGGCTCTGCTAGAGCCCTTTGTCATTCTTGTCCTTCTTTTCAGCTTCCGCATCGTGCCATATATGTTACCGTTCGAGGTGGTGTTACTGAGACTCCATGTCCATACAAGTGCGTTTCTGACAGATATCACATGCCAAACTGTTATACAGCAGTTGAAGAATTGGTATACACTTTCGGTGGACCGTGGTTGTTCTGTCTTATTCTGTTAGGTCTCCTCGTCCTCTTAGCTCTTGTGCTCAGTGTTGCACGAATGAAATATGTTACTGCAGACGAATTACCAGCTGTTGTACCTGCTCGACGGGGCTCCCGTATAGATCATTCTTTCCCTTTCCTTGAATCGTTAAATGAGGTTTTGGAAACAAATAGAAATGAGGAATCTCAGAGTCATGTGCATAGGATGTATTTCATGGGGCCAAATACATTCAGTGAACCTTGGCATCTACCTCATTCCCCTCCAGAACAAATAACAGAGATAGTATATGAGGATGCATTCAATCGGTTTGTGGATGAGATTAATGGTCTAGCTGCTTATCAGTGGTGGGAAGGATCAGTCTACAGCATTCTTTCTATTCTTGCCTATCCACTTGCTTGGTGTTGGCTACAGAGTCGACGGAAACAGAAATTACAACAACTTCGTGAATTTGTTCGATCAGAATATGATCATTCTTGCTTGCGTTCTTGTCGTTCCCGTGCACTATATGAAGGGATTAAGGTAGCTGCAACTACAGATTTGATGCTTGCATATGTGGACTTTTTCCTAGGTGGAGATGAGAAAAGAGCTGGCCTTCCTCCCCGTCTTCATCAGAGATTTCCAATGTCTATAATTTTTGGAGGAGATGGAAGTTACATGGCTCCTTTCTCTCTTCAGAGTGATAACATTCTTACTAGCCTCATGAGTCAGTCTGTTCCACCTACCGTCTGGTATCGGCTTGTAGCCGGTCTAAATGCTCAGTTGCGCTTAGTCCGGCATGGACACTTAAAACTGACTTTTGGTCATGTTACTAGCTGGCTTGAAACACATGCAAAACCTACTCTTGGTGCATTTGGCATACATGTTGATCTTGCCTGGTTTCAGCCTACAGCGTCTGGATATTGCCACTTTGGAATCGTGGTATATGCTATGGAAGTTGAAAGTCTGCCATCTGAATTGGACGGTCAAGGTGCATTCTTTCCACCAGAGCATCAGTCACGGGATGAAAGTGAATGGTGGGTGCTTCCTTGTGGTCTAGTACTGTGCAAAGTTGTCCAATCACGACTTATTGATTGCCTTGTGGCAAACCAGGAGATTCAGGATCACTCACTGTACAGCAATGACCCTGAACTGTTCTGGCAGTCAGAATCAGATAAGGGGATTGGAGCAAATGAATCTGACATTGTTGAGTCAGAGCATGGTGTTGTTGCTGCTGATGATGCCAGGTGTTCCAAAATCGGTGCATCGATTCTTAGGCAGGGTGGGCATGCTGTTGATGCTTCAGTGGCAACAGCATTGTGCCTTGGCGTTGTTAATCCGATGGCAAGTGGAATAGGAGGTGGGGGGTTTATGGTTGTCAGATCTTCAGCAACCTCGAAAACCCAAGCTTTCGATATGAGGGAAACTGCTCCTTCAGCTGCTTCACAGAATATGTATGAAAGCAATCCTGAAGCCAAGTTATATGGTGCATTGTCAATGGGGGTTCCTGGTGAGATTGCTGGCCTACATGAAGCATGGTTACAACATGGGCGAATGGCGTGGAGGACTTTATTTCAGCCTGCAATAAAGCTCGCTAAAGAGGGATTTGAAGTTGCTCCTTACCTTGGAGGACATATACGTTCATGTGAAGAAATGATTATAAAAGACCCTGGCTTAAGGCAAGTGTTTGCCCCAAACGGGAAGGTGTTAAAAGCAGGTGATAAGTGTTATAATGTGGAACTTGGCAATAGCTTAGAGGCAATTGCAGAATTGGGGCCACAAGCCTTCTACAACGGTAGTCTTGGTGAAAAAATTGTAAAAGATGTGAGAGAGGCTGGTGGGATTTTGACAATGGAGGATTTGAGGAATTACAAAGTGAATATTACGGATGCCATGACTGCAAATGTGTTGGGATATACTATATCAGGAATGCCACCTCCTTCAGCTGGAACTTTGGGGCTTTCTATGATTCTGAACATCTTCAACAGCTATGGAAATTCAGATGCAGCAAACGGAGATCTTGGTCTGCATCGTCTGATTGAAGCATTGAAACACATGTTTGCAATCCGAATGAACTTGGGTGATCCTGCTTTTGTAGATACCCATGAATATGCATCTGATATGCTTTCTCCATCCTTTGCTAAGGAAATTCAGCAGAAGATATTTGACAACACAACTTTCCCACCAGAGTGGAGTCAGCTCAGAGATCACGGAACAAGTCATTTCTGCATAGTAGATGCAGACAGAAATGCGGTATCAATGACAACCACTGTAAACTATCCATTTGGAGGTGGAGTACTCTCTCCTTCTACTGGAATTGTGCTCAACAATGAGATGGGTGACTTCTCAATTCCCACTGACATATCGCCAGACCATCTCCCTCCTGCTCCGTCAAATTTCATTGAACCAATCAAAAGACCTTTATCTTCCATGACTCCTATAATAGTCACAAAGGATAATCAATTGGTTGGTGTGCTTGGAGGTAGTGGTGGTTTGAACATTATCCCAGCTGTAACTCAGGTGTTTATCAATTATTTCATATTGGGGATGGAACCTTTAGCCGCAGTTCAAAGTCCAAGGGTCTACCACAGGCTAATACCAAACATAGTGTCCTATGAAAACTGGACTGTTATCGATGGAGATCATATCGAGCTTTCAGACGAAAGAAAGCTCTTCTTGCAGGAGCAGGGTCATGAATTGCAGGCTAAAGCCGGGGGAGCCATCACTCAGCTCATTGTTCAAAGACTTGGAAACCCTATTCAGATGGGCAGGAAATGTTGTAGAAGTTCAAATGAAAACGTTTTCCATGGTTTACTCACTGCTGTAAGTGACCCTAGAAAAGATGGAAGGCCTGCAGCTGTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1824

Amino Acids

194.82

Weight (kDa)

5.6

Isoelectric Point (pI)

45.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF8003 PF26010 788 - 862 1.5e-34 Domain of unknown function (DUF8003)
G_glu_transpept PF01019 1293 - 1819 2.1e-169 Gamma-glutamyltranspeptidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 4271, 4341
AarI CACCTGC 3 cut(s) 959, 1958, 4316
Acc36I ACCTGC 4 cut(s) 959, 1958, 2740, 4316
AccB1I GGYRCC 1 cut(s) 2423
AccI GTMKAC 4 cut(s) 2607, 2994, 3049, 5193
AccII CGCG 1 cut(s) 137
AclI AACGTT 1 cut(s) 5409
AcuI CTGAAG 9 cut(s) 913, 1635, 1637, 3290, 3897, 3981, 4029, 4101, 4536
AdeI CACNNNGTG 2 cut(s) 1723, 2162
AfaI GTAC 7 cut(s) 658, 677, 1740, 2730, 3672, 3746, 4908
AflII CTTAAG 1 cut(s) 4285
AflIII ACRYGT 2 cut(s) 3493, 4665
AhdI GACNNNNNGTC 2 cut(s) 2538, 3432
AhlI ACTAGT 2 cut(s) 491, 659
AjuI GAANNNNNNNTTGG 2 cut(s) 2403, 2435
AleI CACNNNNGTG 1 cut(s) 4798
Alw21I GWGCWC 6 cut(s) 240, 341, 1581, 2679, 3136, 4935
Alw26I GTCTC 5 cut(s) 123, 206, 704, 2525, 2657
Alw44I GTGCAC 1 cut(s) 3132
AlwNI CAGNNNCTG 2 cut(s) 974, 3527
AoxI GGCC 8 cut(s) 1469, 1526, 2373, 2852, 3223, 4132, 4385, 5459
ApaLI GTGCAC 1 cut(s) 3132
ArsI GACNNNNNNTTYG 2 cut(s) 5204, 5236
AseI ATTAAT 3 cut(s) 453, 2307, 2955
Asp700I GAANNNNTTC 4 cut(s) 886, 1602, 3084, 4589
AspA2I CCTAGG 1 cut(s) 3199
AspLEI GCGC 2 cut(s) 139, 3399
AspS9I GGNCC 8 cut(s) 1469, 1505, 1526, 2105, 2373, 2621, 2852, 4385
AsuC2I CCSGG 3 cut(s) 400, 578, 5323
AsuHPI GGTGA 9 cut(s) 43, 521, 770, 1735, 4133, 4340, 4427, 4703, 4961
AsuII TTCGAA 1 cut(s) 1288
AvaII GGWCC 3 cut(s) 1505, 2105, 2621
AvrII CCTAGG 1 cut(s) 3199
BaeGI GKGCMC 1 cut(s) 3136
BamHI GGATCC 2 cut(s) 598, 2117
BanI GGYRCC 1 cut(s) 2423
BanII GRGCYC 7 cut(s) 240, 478, 1285, 1581, 2033, 2458, 2747
BarI GAAGNNNNNNTAC 2 cut(s) 4134, 4166
BbsI GAAGAC 2 cut(s) 1187, 3230
Bbv12I GWGCWC 6 cut(s) 240, 341, 1581, 2679, 3136, 4935
BbvCI CCTCAGC 1 cut(s) 171
BceAI ACGGC 1 cut(s) 1122
BclI TGATCA 1 cut(s) 3100
BcnI CCSGG 3 cut(s) 400, 578, 5323
BcoDI GTCTC 5 cut(s) 123, 206, 704, 2525, 2657
BcuI ACTAGT 2 cut(s) 491, 659
BfmI CTRYAG 8 cut(s) 190, 975, 2706, 2995, 3041, 3165, 3519, 5463
BfrI CTTAAG 1 cut(s) 4285
BfuAI ACCTGC 4 cut(s) 959, 1958, 2740, 4316
BglI GCCNNNNNGGC 1 cut(s) 2421
BglII AGATCT 2 cut(s) 3992, 4627
BlnI CCTAGG 1 cut(s) 3199
BmcAI AGTACT 3 cut(s) 658, 3672, 4908
Bme18I GGWCC 3 cut(s) 1505, 2105, 2621
BmeRI GACNNNNNGTC 2 cut(s) 2538, 3432
BmgT120I GGNCC 8 cut(s) 1469, 1505, 1526, 2105, 2373, 2621, 2852, 4385
BmrI ACTGGG 5 cut(s) 222, 471, 1476, 1729, 2322
BmuI ACTGGG 5 cut(s) 222, 471, 1476, 1729, 2322
BpiI GAAGAC 2 cut(s) 1187, 3230
BplI GAGNNNNNCTC 2 cut(s) 186, 218
BpmI CTGGAG 2 cut(s) 888, 2880
Bpu10I CCTNAGC 3 cut(s) 101, 171, 4752
Bpu14I TTCGAA 1 cut(s) 1288
BpuEI CTTGAG 1 cut(s) 271
BpuMI CCSGG 3 cut(s) 400, 578, 5323
Bsa29I ATCGAT 2 cut(s) 3878, 5244
BsaBI GATNNNNATC 2 cut(s) 2274, 5250
BsaI GGTCTC 2 cut(s) 206, 2657
BsaWI WCCGGW 1 cut(s) 2120
Bse118I RCCGGY 1 cut(s) 3377
Bse3DI GCAATG 2 cut(s) 91, 3757
Bse8I GATNNNNATC 2 cut(s) 2274, 5250
BseCI ATCGAT 2 cut(s) 3878, 5244
BseJI GATNNNNATC 2 cut(s) 2274, 5250
BseMI GCAATG 2 cut(s) 91, 3757
BseRI GAGGAG 6 cut(s) 558, 638, 795, 2235, 2645, 3288
BseSI GKGCMC 1 cut(s) 3136
BseYI CCCAGC 3 cut(s) 470, 1789, 5116
BsgI GTGCAG 1 cut(s) 1197
Bsh1236I CGCG 1 cut(s) 137
BshFI GGCC 8 cut(s) 1471, 1528, 2375, 2854, 3225, 4134, 4387, 5461
BshNI GGYRCC 1 cut(s) 2423
BshVI ATCGAT 2 cut(s) 3878, 5244
BsiHKAI GWGCWC 6 cut(s) 240, 341, 1581, 2679, 3136, 4935
BsiSI CCGG 7 cut(s) 164, 399, 578, 2121, 3378, 3406, 5322
BslFI GGGAC 4 cut(s) 983, 994, 2364, 2371
BsmAI GTCTC 5 cut(s) 123, 206, 704, 2525, 2657
BsmBI CGTCTC 1 cut(s) 704
BsmFI GGGAC 4 cut(s) 983, 994, 2364, 2371
BsmI GAATGC 6 cut(s) 36, 2417, 2930, 3000, 3605, 4545
BsnI GGCC 8 cut(s) 1471, 1528, 2375, 2854, 3225, 4134, 4387, 5461
Bso31I GGTCTC 2 cut(s) 206, 2657
Bsp119I TTCGAA 1 cut(s) 1288
Bsp1407I TGTACA 2 cut(s) 1738, 3744
Bsp19I CCATGG 1 cut(s) 5416
BspANI GGCC 8 cut(s) 1471, 1528, 2375, 2854, 3225, 4134, 4387, 5461
BspDI ATCGAT 2 cut(s) 3878, 5244
BspFNI CGCG 1 cut(s) 137
BspHI TCATGA 2 cut(s) 3333, 5302
BspMAI CTGCAG 4 cut(s) 194, 979, 2710, 5467
BspMI ACCTGC 4 cut(s) 959, 1958, 2740, 4316
BspQI GCTCTTC 3 cut(s) 1230, 1290, 5288
BspT104I TTCGAA 1 cut(s) 1288
BspT107I GGYRCC 1 cut(s) 2423
BspTI CTTAAG 1 cut(s) 4285
BspTNI GGTCTC 2 cut(s) 206, 2657
BsrDI GCAATG 2 cut(s) 91, 3757
BsrFI RCCGGY 1 cut(s) 3377
BsrGI TGTACA 2 cut(s) 1738, 3744
BssAI RCCGGY 1 cut(s) 3377
BssNAI GTATAC 1 cut(s) 2608
BssT1I CCWWGG 7 cut(s) 1110, 2873, 3199, 3934, 4234, 5186, 5416
Bst1107I GTATAC 1 cut(s) 2608
Bst6I CTCTTC 7 cut(s) 53, 1230, 1290, 1656, 1750, 3309, 5288
BstAFI CTTAAG 1 cut(s) 4285
BstAPI GCANNNNNTGC 1 cut(s) 974
BstAUI TGTACA 2 cut(s) 1738, 3744
BstBI TTCGAA 1 cut(s) 1288
BstDSI CCRYGG 2 cut(s) 2624, 5416
BstFNI CGCG 1 cut(s) 137
BstHHI GCGC 2 cut(s) 139, 3399
BstMAI GTCTC 5 cut(s) 123, 206, 704, 2525, 2657
BstNSI RCATGY 5 cut(s) 2575, 3464, 3497, 3902, 4669
BstSFI CTRYAG 8 cut(s) 190, 975, 2706, 2995, 3041, 3165, 3519, 5463
BstSLI GKGCMC 1 cut(s) 3136
BstUI CGCG 1 cut(s) 137
BstV2I GAAGAC 2 cut(s) 1187, 3230
BstX2I RGATCY 6 cut(s) 598, 1511, 1700, 2117, 3992, 4627
BstXI CCANNNNNNTGG 6 cut(s) 79, 609, 1117, 1390, 3030, 4800
BstYI RGATCY 6 cut(s) 598, 1511, 1700, 2117, 3992, 4627
BstZ17I GTATAC 1 cut(s) 2608
Bsu15I ATCGAT 2 cut(s) 3878, 5244
BsuRI GGCC 8 cut(s) 1471, 1528, 2375, 2854, 3225, 4134, 4387, 5461
BsuTUI ATCGAT 2 cut(s) 3878, 5244
BtgI CCRYGG 2 cut(s) 2624, 5416
BtgZI GCGATG 1 cut(s) 129
BtsI GCAGTG 1 cut(s) 5427
BveI ACCTGC 4 cut(s) 959, 1958, 2740, 4316
CaiI CAGNNNCTG 2 cut(s) 974, 3527
CciI TCATGA 2 cut(s) 3333, 5302
CfoI GCGC 2 cut(s) 139, 3399
Cfr10I RCCGGY 1 cut(s) 3377
Cfr13I GGNCC 8 cut(s) 1469, 1505, 1526, 2105, 2373, 2621, 2852, 4385
ClaI ATCGAT 2 cut(s) 3878, 5244
CseI GACGC 1 cut(s) 3513
CsiI ACCWGGT 1 cut(s) 1497
Csp6I GTAC 7 cut(s) 657, 676, 1739, 2729, 3671, 3745, 4907
CviQI GTAC 7 cut(s) 657, 676, 1739, 2729, 3671, 3745, 4907
DraIII CACNNNGTG 2 cut(s) 1723, 2162
DriI GACNNNNNGTC 2 cut(s) 2538, 3432
Eam1104I CTCTTC 7 cut(s) 53, 1230, 1290, 1656, 1750, 3309, 5288
Eam1105I GACNNNNNGTC 2 cut(s) 2538, 3432
EarI CTCTTC 7 cut(s) 53, 1230, 1290, 1656, 1750, 3309, 5288
EciI GGCGGA 2 cut(s) 150, 468
Ecl136II GAGCTC 2 cut(s) 238, 1579
Eco130I CCWWGG 7 cut(s) 1110, 2873, 3199, 3934, 4234, 5186, 5416
Eco147I AGGCCT 1 cut(s) 5461
Eco24I GRGCYC 7 cut(s) 240, 478, 1285, 1581, 2033, 2458, 2747
Eco31I GGTCTC 2 cut(s) 206, 2657
Eco32I GATATC 1 cut(s) 2567
Eco47I GGWCC 3 cut(s) 1505, 2105, 2621
Eco53kI GAGCTC 2 cut(s) 238, 1579
Eco57I CTGAAG 9 cut(s) 913, 1635, 1637, 3290, 3897, 3981, 4029, 4101, 4536
EcoICRI GAGCTC 2 cut(s) 238, 1579
EcoO109I RGGNCCY 3 cut(s) 1526, 2105, 2373
EcoRI GAATTC 2 cut(s) 89, 1318
EcoRV GATATC 1 cut(s) 2567
EcoT14I CCWWGG 7 cut(s) 1110, 2873, 3199, 3934, 4234, 5186, 5416
EcoT22I ATGCAT 3 cut(s) 2275, 2932, 4726
EcoT38I GRGCYC 7 cut(s) 240, 478, 1285, 1581, 2033, 2458, 2747
ErhI CCWWGG 7 cut(s) 1110, 2873, 3199, 3934, 4234, 5186, 5416
Esp3I CGTCTC 1 cut(s) 704
FalI AAGNNNNNCTT 2 cut(s) 5270, 5302
FaqI GGGAC 4 cut(s) 983, 994, 2364, 2371
FauI CCCGC 2 cut(s) 1826, 2020
FauNDI CATATG 2 cut(s) 604, 3184
FbaI TGATCA 1 cut(s) 3100
FblI GTMKAC 4 cut(s) 2607, 2994, 3049, 5193
FriOI GRGCYC 7 cut(s) 240, 478, 1285, 1581, 2033, 2458, 2747
GlaI GCGC 2 cut(s) 138, 3398
GsaI CCCAGC 3 cut(s) 474, 1793, 5120
GsuI CTGGAG 2 cut(s) 888, 2880
HaeIII GGCC 8 cut(s) 1471, 1528, 2375, 2854, 3225, 4134, 4387, 5461
HapII CCGG 7 cut(s) 164, 399, 578, 2121, 3378, 3406, 5322
HgaI GACGC 1 cut(s) 3513
HhaI GCGC 2 cut(s) 139, 3399
Hin6I GCGC 2 cut(s) 137, 3397
HinP1I GCGC 2 cut(s) 137, 3397
HincII GTYRAC 1 cut(s) 3050
HindII GTYRAC 1 cut(s) 3050
HindIII AAGCTT 2 cut(s) 247, 4017
HpaII CCGG 7 cut(s) 164, 399, 578, 2121, 3378, 3406, 5322
HphI GGTGA 9 cut(s) 43, 521, 770, 1735, 4133, 4340, 4427, 4703, 4961
Hpy99I CGWCG 3 cut(s) 1871, 2742, 3054
HpyCH4IV ACGT 3 cut(s) 804, 4249, 5409
HpySE526I ACGT 3 cut(s) 804, 4249, 5409
HspAI GCGC 2 cut(s) 137, 3397
Ksp22I TGATCA 1 cut(s) 3100
LguI GCTCTTC 3 cut(s) 1230, 1290, 5288
MabI ACCWGGT 1 cut(s) 1497
MaeII ACGT 3 cut(s) 804, 4249, 5409
MfeI CAATTG 3 cut(s) 846, 4371, 5072
MflI RGATCY 6 cut(s) 598, 1511, 1700, 2117, 3992, 4627
MmeI TCCRAC 5 cut(s) 600, 687, 1038, 1483, 2232
Mph1103I ATGCAT 3 cut(s) 2275, 2932, 4726
MroXI GAANNNNTTC 4 cut(s) 886, 1602, 3084, 4589
MslI CAYNNNNRTG 4 cut(s) 282, 2548, 4719, 4798
MspA1I CMGCKG 6 cut(s) 1827, 2723, 4049, 4556, 5120, 5468
MspCI CTTAAG 1 cut(s) 4285
MspI CCGG 7 cut(s) 164, 399, 578, 2121, 3378, 3406, 5322
MunI CAATTG 3 cut(s) 846, 4371, 5072
Mva1269I GAATGC 6 cut(s) 36, 2417, 2930, 3000, 3605, 4545
MvnI CGCG 1 cut(s) 137
NciI CCSGG 3 cut(s) 400, 578, 5323
NcoI CCATGG 1 cut(s) 5416
NdeI CATATG 2 cut(s) 604, 3184
NmeAIII GCCGAG 1 cut(s) 180
NmuCI GTSAC 6 cut(s) 457, 556, 3627, 4949, 5056, 5438
NsiI ATGCAT 3 cut(s) 2275, 2932, 4726
NspI RCATGY 5 cut(s) 2575, 3464, 3497, 3902, 4669
NspV TTCGAA 1 cut(s) 1288
OliI CACNNNNGTG 1 cut(s) 4798
PaeI GCATGC 1 cut(s) 3902
PagI TCATGA 2 cut(s) 3333, 5302
PaqCI CACCTGC 3 cut(s) 959, 1958, 4316
PceI AGGCCT 1 cut(s) 5461
PciI ACATGT 2 cut(s) 3493, 4665
PciSI GCTCTTC 3 cut(s) 1230, 1290, 5288
PcsI WCGNNNNNNNCGW 3 cut(s) 152, 719, 2746
PctI GAATGC 6 cut(s) 36, 2417, 2930, 3000, 3605, 4545
PdmI GAANNNNTTC 4 cut(s) 886, 1602, 3084, 4589
PfoI TCCNGGA 1 cut(s) 576
PpuMI RGGWCCY 1 cut(s) 2105
PscI ACATGT 2 cut(s) 3493, 4665
PshBI ATTAAT 3 cut(s) 453, 2307, 2955
PsiI TTATAA 2 cut(s) 4271, 4341
Psp124BI GAGCTC 2 cut(s) 240, 1581
Psp1406I AACGTT 1 cut(s) 5409
Psp5II RGGWCCY 1 cut(s) 2105
PspFI CCCAGC 3 cut(s) 470, 1789, 5116
PspPI GGNCC 8 cut(s) 1469, 1505, 1526, 2105, 2373, 2621, 2852, 4385
PspPPI RGGWCCY 1 cut(s) 2105
PstI CTGCAG 4 cut(s) 194, 979, 2710, 5467
PstNI CAGNNNCTG 2 cut(s) 974, 3527
PsuI RGATCY 6 cut(s) 598, 1511, 1700, 2117, 3992, 4627
PvuII CAGCTG 5 cut(s) 2723, 4049, 4556, 5120, 5468
RsaI GTAC 7 cut(s) 658, 677, 1740, 2730, 3672, 3746, 4908
RsaNI GTAC 7 cut(s) 657, 676, 1739, 2729, 3671, 3745, 4907
RseI CAYNNNNRTG 4 cut(s) 282, 2548, 4719, 4798
SacI GAGCTC 2 cut(s) 240, 1581
SalI GTCGAC 1 cut(s) 3048
SapI GCTCTTC 3 cut(s) 1230, 1290, 5288
Sau96I GGNCC 8 cut(s) 1469, 1505, 1526, 2105, 2373, 2621, 2852, 4385
ScaI AGTACT 3 cut(s) 658, 3672, 4908
SexAI ACCWGGT 1 cut(s) 1497
SfcI CTRYAG 8 cut(s) 190, 975, 2706, 2995, 3041, 3165, 3519, 5463
SfuI TTCGAA 1 cut(s) 1288
SinI GGWCC 3 cut(s) 1505, 2105, 2621
SmiMI CAYNNNNRTG 4 cut(s) 282, 2548, 4719, 4798
SmlI CTYRAG 2 cut(s) 250, 4285
SmoI CTYRAG 2 cut(s) 250, 4285
SpeI ACTAGT 2 cut(s) 491, 659
SphI GCATGC 1 cut(s) 3902
SseBI AGGCCT 1 cut(s) 5461
SspI AATATT 2 cut(s) 355, 4492
SstI GAGCTC 2 cut(s) 240, 1581
StuI AGGCCT 1 cut(s) 5461
StyI CCWWGG 7 cut(s) 1110, 2873, 3199, 3934, 4234, 5186, 5416
TaiI ACGT 3 cut(s) 807, 4252, 5412
TatI WGTACW 5 cut(s) 656, 1738, 3670, 3744, 4906
TauI GCSGC 2 cut(s) 178, 5174
TseFI GTSAC 6 cut(s) 457, 556, 3627, 4949, 5056, 5438
Tsp45I GTSAC 6 cut(s) 457, 556, 3627, 4949, 5056, 5438
TspGWI ACGGA 7 cut(s) 1054, 1884, 3067, 4511, 4638, 4836, 4989
Vha464I CTTAAG 1 cut(s) 4285
VneI GTGCAC 1 cut(s) 3132
VpaK11BI GGWCC 3 cut(s) 1505, 2105, 2621
VspI ATTAAT 3 cut(s) 453, 2307, 2955
XceI RCATGY 5 cut(s) 2575, 3464, 3497, 3902, 4669
XcmI CCANNNNNNNNNTGG 1 cut(s) 3357
XmaJI CCTAGG 1 cut(s) 3199
XmiI GTMKAC 4 cut(s) 2607, 2994, 3049, 5193
XmnI GAANNNNTTC 4 cut(s) 886, 1602, 3084, 4589
ZrmI AGTACT 3 cut(s) 658, 3672, 4908
Zsp2I ATGCAT 3 cut(s) 2275, 2932, 4726
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.