AT5G11700

glycine-rich protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0002500
Physical Location & Seq
Reverse (-)
3762391 .. 3771449
9059 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G11700.1

Sequence Viewer

Length: 4260 bp
ATGGCTCGATTTCAATTTTGCTGCGTCTTCGTCTTGGTCGCTCTTGCGGTTTTGGCCGTAAACCCTAGTTCAAGCTATCGATTTACCATTGTGGAACCGAAATCGGGTTCTGATTCCGATTTGGACTCAGATTCAGAGTCGTTACTTTTCCATCAGGACTACTCTCCGCCTGCTCCGCCACCGCCACCACCGCATGGACCGTCGGTATCTTGTAGCGAGGATCTCGGCGGCGTTGGGTTTTTGGATACTACTTGTAAGATTGTCGCCGATTTGAACCTTACGCACGATGTGTATATAGCTGGGAAGGGGAATTTTATCATCCTGCCTGGTGTTAGGTTTCACTGCCCGATCCCTGGTTGTTCTATAGCTATCAATGTTTCTGGAAACTTCTCTTTGGGAGCGGAATCTACAATTGTCGCTGGGACATTGGAGCTTACAGCTGGTAATGCTAGCTTTGCTAATGGGTCGGCGGTGAACACGACGGGGTTAGCTGGGAGCCCTCCGCCACAGACCAGTGGGACACCGCAGGGGATTGATGGTGCTGGTGGTGGACATGGTGGTAGAGGCGCTTGTTGTTTGACTGACACTAAGAAGCTACCTGAAGATGTGTGGGGAGGTGATGCATACTCTTGGTCGACTCTGCAGAAGCCGTGGAGCTATGGTAGTAAAGGAGGGTCAACTAGTAGAGAGATTGATTATGGAGGAGGAGGAGGTGGGAAAGTGAAGATGGATATTCTGCAGCTTCTGGATGTTAACGGAAGCCTTTTGGCAAACGGAGGCTATGGAGGAGCCAAAGGCGGTGGTGGATCTGGTGGCAGCATCTACATCAAGGCATACAAGATGACTGGAATTGGAAAGATCAGTGCATGTGGTGGGAGTGGTTATGGTGGTGGGGGTGGTGGAAGAGTATCTGTCGATATTTTTAGTAGGCATGATGACCCGAAGATTTTTGTGCATGGCGGATACAGTATCGGATGTCCAGATAACTCGGGTGCTGCTGGAACTCTATATGATGCTGTTCCCCGAAGCCTTTTCGTTAGCAACTACAATCAGACAACAGACACGTATACGCTTCTCTTAGAATTTCCATTCCAGCCACTTTGGACCAATGTTTATATTCAGGATAAAGCACGCGCAACTTGTCCTCTGTTATGGAGTCGTGTCCAGGTTCAAGGACAAATTAGTTTGTTGTGCGGTGGTGTTTTGAGCTTCGGATTAGCTCATTATGGTACATCAGTATTTGAGTTGTTGGCAGAAGAACTCTTAATGAGTGATTCTACCATCAAGGTTTACGGGGCATTACGCATGACTGTCAAGATGTTCTTGATGTGGAACTCAGAATTGCATTTAGATGGAGGAGGAGGAGATACAACTGTTTCAACTTCCATGCTTGAGGCTAGCAATTTATTCGTTCTTAGGGGATCATCTGTCATTCGGTCAAATGCAAATCTTGGAGTCCATGGACAAGGTTTCTTGAATCTAACTGGACCAGGGGATTCAATTGAAGCACAACGGCTTGTTTTGTCACTGTTTTACCGGATTTATGTTGGGCCTGGGTCTATCTTGCGTGCTCCTCTACTGAATGCGTCCAGAGATGCTGTTACACCAAAGCTCTATTGTGAACGACAAGATTGCCCTTATGAACTACTGAATCCTCCAGAGGATTGCAATGTGAATGCATCTCTGTCCTTTACTCTACAGATATGCCGAGTTGAGGATATTCTCGTCGAAGGTTTCATTAAAGGATCAGTAGTTCATTTCCACCGGGCAAAAACTGTAACCCTTGAACCCTCTGGAGAGATTAGTGCCAGTGGAATGGGTTGTAGAGGTGGCGTAGGTGAAGGTAAATTGCTTGGAAATGGCTTTGGCAGTGGTGGTGGACATGGTGGTAAAGGGGGGCGTGTTTGTTACAATAACAGCTGTGTTGAAGGTGGAATTACATATGGAAATGCAAATCTCCCTTGTGAGCTTGGCAGTGGAAGTGGCGATTTTAGCCCTGGTTATTCATCTGCTGGTGGTGGTATTGTAGTGATTGGTTCAATGGAGCAGCCTCTATCTGGTTTATCGCTTGAAGGCTCAATTAGGGTTGATGGAGAAAGTGTCAAACGTTTGAGTAGAGATGAAAACGGTTCTATTGTAGCTCCTGGGGGTGGTTCTGGGGGAACAGTCCTTTTGTTCCTGCGTTATCTTATTTTAGGAGAGTCATCTCTTCTCTCAAGTGGTGGTGGGTCTGGCAGTCCTGGTGGTGGTGGTGGTGGCGGAGGTGGGAGGATTCATTTTCATTGGTCAAACATTCCTACTGGGGACATATACCAGCCAATTGCTAGTGTAAAAGGAATAATTCATGCACGAGGGGGAGCAGCAGCGGATGATGGTTTTTATGGCAAAAATGGTACAATAACTGGGACGGCTTGTCCGAAGGGACTCCACGGTATATTTTGCAAGGAATGCCCATCTGGTACATTCAAGAATGTTACTGGATCCGACCCTTCTCTTTGTCGTCCTTGTCCGGTTGATGAGCTTCCAACTCGTGCTGTCTATGTCACAGTTCGAGGTGGTGTTTCTGAGACACCATGTCCATATCGATGCATATCGGAAAGGTATCACATGCCACACTGTTACACCGCACTCGAGGAGTTAATTTACACATTTGGTGGGCCTTGGTTGTTTGGTCTTCTTCTGATGGGTCTCCTCATCCTCTTAGCACTTGTACTTAGTGTTGCACGAATGAAATTTGTTGGAGTTGATGATTTACCTGGCCCAGCTCCCACACAGCATGGCTCTCAAATAGATCATTCGTTCCCTTTCCTGGAATCACTTAATGAGGTGTTGGAAACAAATAGAGCTGAGCAATCTCAGAGTCATGTGCATAGAATGTATTTTATGGGTCCTAATACATTCAGTGAACCGTGGCATCTCTCACACATTCCCCCGGAGGAGATTAAAGAGATAGTATATGAGGCTGCATTTAACACATTTGTCGACGAAATCAACTCTATAGCTGCATATCAATGGTGGGAAGGTGCTATATATAGTATTCTTTCAGTAGTTGCGTATCCGCTCGCATGGTCATGGCAGCAATGGCGGCGGAAGATGAAGTTGCAAAAATTGCGTGAGTTTGTACGTTCAGAATATGATCACTCCTGTTTACGCTCCTGTCGCTCCCGAGCTTTATACGAGGGTCTGAAGGTCGCTGCAACCTCCGATTTGATGCTTGCGTATCTGGATTTCTTCCTTGGTGGGGATGAAAAAAGGACAGACCTTCCACCTCGACTTCACCAAAGGTTTCCAATGCCCATATTGTTTGGTGGTGATGGCAGTTACATGGCTCCTTTCTCACTTCAAAATGACAACATTCTTACCAGTCTGATGAGTCAGCTTGGTTCGCCTACTACTTGGTATAGACTGGTGGCTGGTGTAAATGCTCAATTACGTCTTGTTCGCCGTGGGCGTCTGAGATCAACATTTCATTCTGTTCTGAGATGGTTAGAAACTCATGCTAATCCCGCTCTGGAAACACATGGCATACGGGTTGATCTGGCCTGGTTCCAGACTACAGCTTGTGGTTACTGCCAATATGGTCTCTTGATTCATACTGTTGAGGATTGTGAACCAACATCACCTCAGTGTGTCAGTGAAACAACATGGACTGAAATCCAGCCACGAAAGAACTATGGAGGGATAATCGACCTTGACAGCTTACCGAGTCTGAAAGAGAAGAGAGATATGTTTTTCCTTCTCTCTTTCTTAGTTCACAACACAAAACCTGTGGGCCACCAGGATATGGTTGGCTTAGTTATCTCGATGTTACTTTTAGGAGATTTTAGTCTAGTCTTGCTCACACTCCTCCAGCTGTATTCGATTTCTTTGCTGGATGTACTTTTGGCTTTGTTTATATTACCTCTCGGCTTGCTTCTGCCATTCCCCGCTGGGATTAATGCCTTATTCAGTCATGGACCCAGACGCTCTGCTGGCTTAGCACGTGTTTACGCATTGTGGAACTTCATGTCCTTAGTCAATGTGTTTGTGGCTTTTCTCTGCGGATATGTTCATTATCATAGTGAATCATCAGCTAGCAAGAAAATCCCATTTCAGCCGTGGAATATAAACATGGGTGAAAGTGAATGGTGGATATTCCCAGCAGGACTGGTCGTGTGTAAGATAATGCAATCGCAGCTCATAAATCGACATGTAGCAAACCTGGAGATACAAGACCGCTCGTTGTATAGTAAGGATTATGAGCTGTTTTGGCAGTCGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1419

Amino Acids

152.46

Weight (kDa)

6.09

Isoelectric Point (pI)

43.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF8003 PF26010 800 - 874 5.4e-34 Domain of unknown function (DUF8003)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 194, 3784
AccBSI CCGCTC 4 cut(s) 401, 3061, 3509, 4218
AccI GTMKAC 3 cut(s) 635, 1067, 2982
AccII CGCG 1 cut(s) 1134
AclI AACGTT 1 cut(s) 2107
AclWI GGATC 7 cut(s) 228, 343, 814, 1429, 1753, 2475, 2488
AcoI YGGCCR 1 cut(s) 54
AcsI RAATTY 3 cut(s) 310, 1082, 2732
AcuI CTGAAG 2 cut(s) 621, 3206
AcvI CACGTG 1 cut(s) 3983
AcyI GRCGYC 1 cut(s) 3451
AdeI CACNNNGTG 1 cut(s) 289
AfaI GTAC 6 cut(s) 1231, 2395, 2461, 2712, 3123, 3879
AflIII ACRYGT 3 cut(s) 1062, 3982, 4189
AhdI GACNNNNNGTC 2 cut(s) 2412, 2574
AhlI ACTAGT 1 cut(s) 680
AleI CACNNNNGTG 1 cut(s) 3625
AloI GAACNNNNNNTCC 4 cut(s) 1737, 1769, 3992, 4024
Alw21I GWGCWC 1 cut(s) 1573
Alw26I GTCTC 3 cut(s) 2561, 2693, 3587
AlwI GGATC 7 cut(s) 228, 343, 814, 1429, 1753, 2475, 2488
AlwNI CAGNNNCTG 1 cut(s) 745
Ama87I CYCGRG 3 cut(s) 988, 2630, 3165
AoxI GGCC 6 cut(s) 54, 1550, 2657, 2758, 3540, 3772
ApoI RAATTY 3 cut(s) 310, 1082, 2732
AseI ATTAAT 1 cut(s) 3936
AspLEI GCGC 2 cut(s) 569, 1136
AspS9I GGNCC 9 cut(s) 197, 1104, 1487, 1550, 2657, 2759, 2888, 3772, 3956
AsuC2I CCSGG 2 cut(s) 1766, 2933
AsuHPI GGTGA 7 cut(s) 484, 629, 1850, 3269, 3323, 3612, 4127
AsuNHI GCTAGC 3 cut(s) 449, 1397, 4073
AvaI CYCGRG 3 cut(s) 988, 2630, 3165
AvaII GGWCC 5 cut(s) 197, 1104, 1487, 2888, 3956
BaeI ACNNNNGTAYC 4 cut(s) 1221, 1254, 1359, 1392
BamHI GGATCC 1 cut(s) 2480
BanII GRGCYC 1 cut(s) 500
BauI CACGAG 2 cut(s) 2349, 2529
BbrPI CACGTG 1 cut(s) 3983
BbsI GAAGAC 2 cut(s) 19, 2666
Bbv12I GWGCWC 1 cut(s) 1573
BceAI ACGGC 6 cut(s) 41, 634, 1529, 2424, 3429, 4081
BcgI CGANNNNNNTGC 6 cut(s) 1390, 1424, 1614, 1648, 3850, 3884
BciVI GTATCC 3 cut(s) 238, 956, 3066
BclI TGATCA 1 cut(s) 3136
BcnI CCSGG 2 cut(s) 1766, 2933
BcoDI GTCTC 3 cut(s) 2561, 2693, 3587
BcuI ACTAGT 1 cut(s) 680
BfaI CTAG 7 cut(s) 66, 450, 681, 1398, 2325, 3830, 4074
BfmI CTRYAG 6 cut(s) 363, 641, 737, 1697, 2997, 3555
BfoI RGCGCY 1 cut(s) 570
BfuI GTATCC 3 cut(s) 238, 956, 3066
BlpI GCTNAGC 2 cut(s) 2847, 3976
Bme18I GGWCC 5 cut(s) 197, 1104, 1487, 2888, 3956
BmeRI GACNNNNNGTC 2 cut(s) 2412, 2574
BmeT110I CYCGRG 3 cut(s) 988, 2630, 3165
BmgT120I GGNCC 9 cut(s) 197, 1104, 1487, 1550, 2657, 2759, 2888, 3772, 3956
BmiI GGNNCC 8 cut(s) 96, 497, 790, 2482, 2889, 3330, 3548, 3958
BmrI ACTGGG 2 cut(s) 2310, 2412
BmsI GCATC 8 cut(s) 610, 828, 1003, 1585, 1688, 2576, 2923, 3201
BmtI GCTAGC 3 cut(s) 453, 1401, 4077
BmuI ACTGGG 2 cut(s) 2310, 2412
BpiI GAAGAC 2 cut(s) 19, 2666
BpmI CTGGAG 4 cut(s) 1641, 1815, 3833, 4223
Bpu1102I GCTNAGC 2 cut(s) 2847, 3976
BpuEI CTTGAG 2 cut(s) 1412, 2200
BpuMI CCSGG 2 cut(s) 1766, 2933
Bsa29I ATCGAT 2 cut(s) 79, 2584
BsaAI YACGTR 2 cut(s) 1065, 3983
BsaBI GATNNNNATC 1 cut(s) 2590
BsaHI GRCGYC 1 cut(s) 3451
BsaI GGTCTC 2 cut(s) 2693, 3587
BsaWI WCCGGW 2 cut(s) 1536, 2509
BsaXI ACNNNNNCTCC 4 cut(s) 646, 676, 2085, 2115
Bse3DI GCAATG 2 cut(s) 1675, 3086
Bse8I GATNNNNATC 1 cut(s) 2590
BseCI ATCGAT 2 cut(s) 79, 2584
BseGI GGATG 7 cut(s) 318, 754, 980, 2374, 2694, 3250, 3880
BseJI GATNNNNATC 1 cut(s) 2590
BseMI GCAATG 2 cut(s) 1675, 3086
BseMII CTCAG 8 cut(s) 141, 1350, 2556, 2838, 2870, 3446, 3470, 3638
BseYI CCCAGC 6 cut(s) 299, 419, 491, 2761, 3929, 4138
Bsh1236I CGCG 1 cut(s) 1134
BshFI GGCC 6 cut(s) 56, 1552, 2659, 2760, 3542, 3774
BshVI ATCGAT 2 cut(s) 79, 2584
BsiHKAI GWGCWC 1 cut(s) 1573
BsiHKCI CYCGRG 3 cut(s) 988, 2630, 3165
BsiSI CCGG 4 cut(s) 1537, 1765, 2510, 2933
BslFI GGGAC 5 cut(s) 436, 532, 2318, 2419, 2436
BsmAI GTCTC 3 cut(s) 2561, 2693, 3587
BsmFI GGGAC 5 cut(s) 436, 532, 2318, 2419, 2436
BsmI GAATGC 3 cut(s) 1588, 1681, 2453
BsnI GGCC 6 cut(s) 56, 1552, 2659, 2760, 3542, 3774
Bso31I GGTCTC 2 cut(s) 2693, 3587
BsoBI CYCGRG 3 cut(s) 988, 2630, 3165
Bsp1286I GDGCHC 2 cut(s) 500, 1573
Bsp1720I GCTNAGC 2 cut(s) 2847, 3976
Bsp19I CCATGG 1 cut(s) 1459
BspANI GGCC 6 cut(s) 56, 1552, 2659, 2760, 3542, 3774
BspCNI CTCAG 8 cut(s) 140, 1349, 2557, 2839, 2869, 3447, 3471, 3637
BspDI ATCGAT 2 cut(s) 79, 2584
BspFNI CGCG 1 cut(s) 1134
BspLI GGNNCC 8 cut(s) 96, 497, 790, 2482, 2889, 3330, 3548, 3958
BspMAI CTGCAG 2 cut(s) 645, 741
BspOI GCTAGC 3 cut(s) 453, 1401, 4077
BspPI GGATC 7 cut(s) 228, 343, 814, 1429, 1753, 2475, 2488
BspTNI GGTCTC 2 cut(s) 2693, 3587
BsrBI CCGCTC 4 cut(s) 401, 3061, 3509, 4218
BsrDI GCAATG 2 cut(s) 1675, 3086
BssNAI GTATAC 1 cut(s) 1068
BssNI GRCGYC 1 cut(s) 3451
BssSI CACGAG 2 cut(s) 2349, 2529
BssT1I CCWWGG 3 cut(s) 1459, 2660, 3235
Bst1107I GTATAC 1 cut(s) 1068
Bst2BI CACGAG 2 cut(s) 2349, 2529
Bst6I CTCTTC 3 cut(s) 898, 2214, 3713
BstACI GRCGYC 1 cut(s) 3451
BstAPI GCANNNNNTGC 2 cut(s) 2448, 3109
BstBAI YACGTR 2 cut(s) 1065, 3983
BstDSI CCRYGG 6 cut(s) 650, 1459, 2428, 2909, 3445, 4097
BstF5I GGATG 7 cut(s) 318, 754, 980, 2374, 2694, 3250, 3880
BstFNI CGCG 1 cut(s) 1134
BstH2I RGCGCY 1 cut(s) 570
BstHHI GCGC 2 cut(s) 569, 1136
BstMAI GTCTC 3 cut(s) 2561, 2693, 3587
BstNSI RCATGY 3 cut(s) 870, 2611, 4193
BstSFI CTRYAG 6 cut(s) 363, 641, 737, 1697, 2997, 3555
BstUI CGCG 1 cut(s) 1134
BstV2I GAAGAC 2 cut(s) 19, 2666
BstX2I RGATCY 3 cut(s) 220, 806, 2480
BstXI CCANNNNNNTGG 1 cut(s) 1816
BstYI RGATCY 3 cut(s) 220, 806, 2480
BstZ17I GTATAC 1 cut(s) 1068
Bsu15I ATCGAT 2 cut(s) 79, 2584
BsuI GTATCC 3 cut(s) 238, 956, 3066
BsuRI GGCC 6 cut(s) 56, 1552, 2659, 2760, 3542, 3774
BsuTUI ATCGAT 2 cut(s) 79, 2584
BtgI CCRYGG 6 cut(s) 650, 1459, 2428, 2909, 3445, 4097
BtsCI GGATG 7 cut(s) 318, 754, 980, 2374, 2694, 3250, 3880
BtsI GCAGTG 3 cut(s) 340, 1876, 1981
CaiI CAGNNNCTG 1 cut(s) 745
CfoI GCGC 2 cut(s) 569, 1136
Cfr13I GGNCC 9 cut(s) 197, 1104, 1487, 1550, 2657, 2759, 2888, 3772, 3956
ClaI ATCGAT 2 cut(s) 79, 2584
CseI GACGC 4 cut(s) 13, 1575, 3440, 3972
Csp6I GTAC 6 cut(s) 1230, 2394, 2460, 2711, 3122, 3878
CspCI CAANNNNNGTGG 4 cut(s) 781, 816, 3750, 3785
CviQI GTAC 6 cut(s) 1230, 2394, 2460, 2711, 3122, 3878
DraIII CACNNNGTG 1 cut(s) 289
DriI GACNNNNNGTC 2 cut(s) 2412, 2574
EaeI YGGCCR 1 cut(s) 54
Eam1104I CTCTTC 3 cut(s) 898, 2214, 3713
Eam1105I GACNNNNNGTC 2 cut(s) 2412, 2574
EarI CTCTTC 3 cut(s) 898, 2214, 3713
EciI GGCGGA 6 cut(s) 156, 165, 492, 975, 2274, 3103
Eco130I CCWWGG 3 cut(s) 1459, 2660, 3235
Eco24I GRGCYC 1 cut(s) 500
Eco31I GGTCTC 2 cut(s) 2693, 3587
Eco47I GGWCC 5 cut(s) 197, 1104, 1487, 2888, 3956
Eco57I CTGAAG 2 cut(s) 621, 3206
Eco72I CACGTG 1 cut(s) 3983
Eco88I CYCGRG 3 cut(s) 988, 2630, 3165
EcoO109I RGGNCCY 1 cut(s) 2888
EcoT14I CCWWGG 3 cut(s) 1459, 2660, 3235
EcoT22I ATGCAT 3 cut(s) 625, 1681, 2591
EcoT38I GRGCYC 1 cut(s) 500
ErhI CCWWGG 3 cut(s) 1459, 2660, 3235
FalI AAGNNNNNCTT 2 cut(s) 1307, 1339
FaqI GGGAC 5 cut(s) 436, 532, 2318, 2419, 2436
FauI CCCGC 2 cut(s) 3514, 3934
FauNDI CATATG 1 cut(s) 1942
FbaI TGATCA 1 cut(s) 3136
FblI GTMKAC 3 cut(s) 635, 1067, 2982
FokI GGATG 7 cut(s) 305, 761, 987, 2381, 2681, 3257, 3887
FriOI GRGCYC 1 cut(s) 500
FspBI CTAG 7 cut(s) 66, 450, 681, 1398, 2325, 3830, 4074
GlaI GCGC 2 cut(s) 568, 1135
GsaI CCCAGC 6 cut(s) 303, 423, 495, 2765, 3933, 4142
GsuI CTGGAG 4 cut(s) 1641, 1815, 3833, 4223
HaeII RGCGCY 1 cut(s) 570
HaeIII GGCC 6 cut(s) 56, 1552, 2659, 2760, 3542, 3774
HapII CCGG 4 cut(s) 1537, 1765, 2510, 2933
HgaI GACGC 4 cut(s) 13, 1575, 3440, 3972
HhaI GCGC 2 cut(s) 569, 1136
Hin1I GRCGYC 1 cut(s) 3451
Hin6I GCGC 2 cut(s) 567, 1134
HinP1I GCGC 2 cut(s) 567, 1134
HincII GTYRAC 4 cut(s) 636, 678, 754, 2983
HindII GTYRAC 4 cut(s) 636, 678, 754, 2983
HpaI GTTAAC 1 cut(s) 754
HpaII CCGG 4 cut(s) 1537, 1765, 2510, 2933
HphI GGTGA 7 cut(s) 484, 629, 1850, 3269, 3323, 3612, 4127
Hpy99I CGWCG 4 cut(s) 205, 484, 1730, 2987
HpyCH4IV ACGT 5 cut(s) 1064, 2107, 3124, 3433, 3982
HpySE526I ACGT 5 cut(s) 1064, 2107, 3124, 3433, 3982
Hsp92I GRCGYC 1 cut(s) 3451
HspAI GCGC 2 cut(s) 567, 1134
Ksp22I TGATCA 1 cut(s) 3136
KspAI GTTAAC 1 cut(s) 754
LweI GCATC 8 cut(s) 610, 828, 1003, 1585, 1688, 2576, 2923, 3201
MaeI CTAG 7 cut(s) 66, 450, 681, 1398, 2325, 3830, 4074
MaeII ACGT 5 cut(s) 1064, 2107, 3124, 3433, 3982
MbiI CCGCTC 4 cut(s) 401, 3061, 3509, 4218
MfeI CAATTG 3 cut(s) 411, 1500, 2319
MflI RGATCY 3 cut(s) 220, 806, 2480
MhlI GDGCHC 2 cut(s) 500, 1573
MmeI TCCRAC 4 cut(s) 2508, 2549, 2719, 2811
Mph1103I ATGCAT 3 cut(s) 625, 1681, 2591
MseI TTAA 8 cut(s) 753, 1265, 1740, 2639, 2820, 2943, 2970, 3936
MslI CAYNNNNRTG 5 cut(s) 1350, 2584, 3010, 3070, 3625
MspA1I CMGCKG 5 cut(s) 440, 1920, 2366, 3853, 3929
MspI CCGG 4 cut(s) 1537, 1765, 2510, 2933
MunI CAATTG 3 cut(s) 411, 1500, 2319
Mva1269I GAATGC 3 cut(s) 1588, 1681, 2453
MvnI CGCG 1 cut(s) 1134
NciI CCSGG 2 cut(s) 1766, 2933
NcoI CCATGG 1 cut(s) 1459
NdeI CATATG 1 cut(s) 1942
NheI GCTAGC 3 cut(s) 449, 1397, 4073
NlaIV GGNNCC 8 cut(s) 96, 497, 790, 2482, 2889, 3330, 3548, 3958
NmeAIII GCCGAG 3 cut(s) 204, 1733, 3885
NmuCI GTSAC 2 cut(s) 1524, 2542
NsiI ATGCAT 3 cut(s) 625, 1681, 2591
NspI RCATGY 3 cut(s) 870, 2611, 4193
OliI CACNNNNGTG 1 cut(s) 3625
PaeR7I CTCGAG 1 cut(s) 2630
PciI ACATGT 1 cut(s) 4189
PcsI WCGNNNNNNNCGW 2 cut(s) 2414, 3448
PctI GAATGC 3 cut(s) 1588, 1681, 2453
PflMI CCANNNNNTGG 2 cut(s) 194, 3784
PfoI TCCNGGA 1 cut(s) 2808
PmaCI CACGTG 1 cut(s) 3983
PmlI CACGTG 1 cut(s) 3983
Ppu21I YACGTR 2 cut(s) 1065, 3983
PpuMI RGGWCCY 1 cut(s) 2888
PscI ACATGT 1 cut(s) 4189
PshBI ATTAAT 1 cut(s) 3936
Psp1406I AACGTT 1 cut(s) 2107
Psp5II RGGWCCY 1 cut(s) 2888
PspCI CACGTG 1 cut(s) 3983
PspFI CCCAGC 6 cut(s) 299, 419, 491, 2761, 3929, 4138
PspN4I GGNNCC 8 cut(s) 96, 497, 790, 2482, 2889, 3330, 3548, 3958
PspPI GGNCC 9 cut(s) 197, 1104, 1487, 1550, 2657, 2759, 2888, 3772, 3956
PspPPI RGGWCCY 1 cut(s) 2888
PspXI VCTCGAGB 1 cut(s) 2630
PstI CTGCAG 2 cut(s) 645, 741
PstNI CAGNNNCTG 1 cut(s) 745
PsuI RGATCY 3 cut(s) 220, 806, 2480
PvuII CAGCTG 3 cut(s) 440, 1920, 3853
RsaI GTAC 6 cut(s) 1231, 2395, 2461, 2712, 3123, 3879
RsaNI GTAC 6 cut(s) 1230, 2394, 2460, 2711, 3122, 3878
RseI CAYNNNNRTG 5 cut(s) 1350, 2584, 3010, 3070, 3625
SalI GTCGAC 2 cut(s) 634, 2981
SaqAI TTAA 8 cut(s) 753, 1265, 1740, 2639, 2820, 2943, 2970, 3936
Sau96I GGNCC 9 cut(s) 197, 1104, 1487, 1550, 2657, 2759, 2888, 3772, 3956
SduI GDGCHC 2 cut(s) 500, 1573
SfaNI GCATC 8 cut(s) 610, 828, 1003, 1585, 1688, 2576, 2923, 3201
SfcI CTRYAG 6 cut(s) 363, 641, 737, 1697, 2997, 3555
Sfr274I CTCGAG 1 cut(s) 2630
SinI GGWCC 5 cut(s) 197, 1104, 1487, 2888, 3956
SlaI CTCGAG 1 cut(s) 2630
SmiMI CAYNNNNRTG 5 cut(s) 1350, 2584, 3010, 3070, 3625
SmlI CTYRAG 3 cut(s) 1391, 2215, 2630
SmoI CTYRAG 3 cut(s) 1391, 2215, 2630
SpeI ACTAGT 1 cut(s) 680
SspMI CTAG 7 cut(s) 66, 450, 681, 1398, 2325, 3830, 4074
StyI CCWWGG 3 cut(s) 1459, 2660, 3235
TaiI ACGT 5 cut(s) 1067, 2110, 3127, 3436, 3985
TaqII GACCGA 1 cut(s) 1425
TatI WGTACW 2 cut(s) 2710, 3877
TauI GCSGC 2 cut(s) 231, 3088
Tru1I TTAA 8 cut(s) 753, 1265, 1740, 2639, 2820, 2943, 2970, 3936
Tru9I TTAA 8 cut(s) 753, 1265, 1740, 2639, 2820, 2943, 2970, 3936
TseFI GTSAC 2 cut(s) 1524, 2542
Tsp45I GTSAC 2 cut(s) 1524, 2542
TspGWI ACGGA 2 cut(s) 771, 789
Van91I CCANNNNNTGG 2 cut(s) 194, 3784
VpaK11BI GGWCC 5 cut(s) 197, 1104, 1487, 2888, 3956
VspI ATTAAT 1 cut(s) 3936
XapI RAATTY 3 cut(s) 310, 1082, 2732
XceI RCATGY 3 cut(s) 870, 2611, 4193
XcmI CCANNNNNNNNNTGG 2 cut(s) 3785, 4095
XhoI CTCGAG 1 cut(s) 2630
XmiI GTMKAC 3 cut(s) 635, 1067, 2982
XspI CTAG 7 cut(s) 66, 450, 681, 1398, 2325, 3830, 4074
Zsp2I ATGCAT 3 cut(s) 625, 1681, 2591
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.