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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G32920 AT4G32920 AT4G32920 AT5G11700 AT5G11700 |
| fragaria_vesca | FvH4_1g06620 FvH4_2g35120 FvH4_2g35120 FvH4_2g35120 FvH4_2g35120 |
| malus_domestica | MD02G1069200.v1.1 MD08G1108700.v1.1 MD15G1089200.v1.1 MD15G1200900.v1.1 |
| prunus_persica | Prupe.1G443300_v2.0.a1 Prupe.1G443300_v2.0.a1 Prupe.1G443300_v2.0.a1 Prupe.7G216400_v2.0.a1 Prupe.7G216400_v2.0.a1 |
| pyrus_communis | pycom02g05480 pycom08g09060 pycom15g08360 |
| rosa_chinensis | RchiOBHm_Chr2g0092351 RchiOBHm_Chr6g0306851 |
| rosa_laevigata | RLG00000010761 RLG00000016302 |
| rosa_multiflora | Rmu_sc0009381.1_g000004 |
| rosa_roxburghii | Rroxscaffold_2G00149210 Rroxscaffold_7G00161420 |
| rosa_rugosa | Rorug02G0025200.1 Rorug06G0353500 |
| rosa_samantha | Rh2AG071100 Rh2BG070700 Rh2CG072100 Rh2DG069600 Rh6AG465300 Rh6BG435500 Rh6CG479700 Rh6DG466700 |
| rosa_wichuraiana | Rw2G006120 Rw6G040550 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1988 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 2229 |
| Acc36I | ACCTGC | 4 cut(s) | 398, 1988, 2770, 4028 |
| AccB1I | GGYRCC | 1 cut(s) | 506 |
| AccBSI | CCGCTC | 1 cut(s) | 193 |
| AccI | GTMKAC | 2 cut(s) | 3079, 4121 |
| AccII | CGCG | 1 cut(s) | 3160 |
| AclI | AACGTT | 1 cut(s) | 465 |
| AclWI | GGATC | 8 cut(s) | 602, 615, 1549, 1738, 2155, 3025, 3855, 4284 |
| AcoI | YGGCCR | 3 cut(s) | 51, 3625, 3838 |
| AcsI | RAATTY | 9 cut(s) | 98, 374, 1167, 1321, 1432, 1462, 1904, 4165, 4269 |
| AcuI | CTGAAG | 1 cut(s) | 1667 |
| AdeI | CACNNNGTG | 1 cut(s) | 2525 |
| AfaI | GTAC | 4 cut(s) | 1008, 2748, 2862, 4289 |
| AfeI | AGCGCT | 2 cut(s) | 2033, 3618 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 340, 341, 597, 1153, 2144, 2240, 2803 |
| AflII | CTTAAG | 2 cut(s) | 3179, 3766 |
| AflIII | ACRYGT | 1 cut(s) | 3523 |
| AhlI | ACTAGT | 1 cut(s) | 500 |
| AleI | CACNNNNGTG | 1 cut(s) | 315 |
| Alw21I | GWGCWC | 3 cut(s) | 249, 487, 3166 |
| Alw26I | GTCTC | 9 cut(s) | 132, 215, 231, 1515, 2055, 2687, 3697, 3729, 4021 |
| Alw44I | GTGCAC | 2 cut(s) | 483, 3162 |
| AlwI | GGATC | 8 cut(s) | 602, 615, 1549, 1738, 2155, 3025, 3855, 4284 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 983 |
| Ama87I | CYCGRG | 1 cut(s) | 2510 |
| Aor51HI | AGCGCT | 2 cut(s) | 2033, 3618 |
| ApaLI | GTGCAC | 2 cut(s) | 483, 3162 |
| ApeKI | GCWGC | 8 cut(s) | 5, 330, 804, 983, 2996, 3188, 3913, 3916 |
| ApoI | RAATTY | 9 cut(s) | 98, 374, 1167, 1321, 1432, 1462, 1904, 4165, 4269 |
| AseI | ATTAAT | 1 cut(s) | 2985 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1248, 1632, 3114 |
| AspLEI | GCGC | 5 cut(s) | 83, 983, 1349, 2034, 3619 |
| AsuHPI | GGTGA | 5 cut(s) | 52, 173, 779, 2309, 2909 |
| AsuII | TTCGAA | 1 cut(s) | 1291 |
| AvaI | CYCGRG | 1 cut(s) | 2510 |
| AvaII | GGWCC | 7 cut(s) | 1092, 1535, 1768, 2118, 2135, 2651, 4022 |
| BaeGI | GKGCMC | 3 cut(s) | 487, 2456, 3166 |
| BalI | TGGCCA | 3 cut(s) | 53, 3627, 3840 |
| BamHI | GGATCC | 1 cut(s) | 607 |
| BanI | GGYRCC | 1 cut(s) | 506 |
| BanII | GRGCYC | 5 cut(s) | 249, 530, 639, 1288, 2488 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2323, 2355 |
| BauI | CACGAG | 1 cut(s) | 196 |
| BbsI | GAAGAC | 1 cut(s) | 3248 |
| Bbv12I | GWGCWC | 3 cut(s) | 249, 487, 3166 |
| BbvI | GCAGC | 7 cut(s) | 317, 816, 970, 2983, 3175, 3900, 3928 |
| BccI | CCATC | 9 cut(s) | 755, 764, 908, 1334, 1813, 1880, 2512, 3617, 3849 |
| BceAI | ACGGC | 2 cut(s) | 486, 1131 |
| BclI | TGATCA | 2 cut(s) | 3130, 4080 |
| BcoDI | GTCTC | 9 cut(s) | 132, 215, 231, 1515, 2055, 2687, 3697, 3729, 4021 |
| BcuI | ACTAGT | 1 cut(s) | 500 |
| BfaI | CTAG | 7 cut(s) | 501, 558, 1802, 1982, 2235, 2412, 3357 |
| BfmI | CTRYAG | 6 cut(s) | 984, 1761, 1995, 2736, 3025, 3914 |
| BfoI | RGCGCY | 4 cut(s) | 984, 1350, 2035, 3620 |
| BfrI | CTTAAG | 2 cut(s) | 3179, 3766 |
| BfuAI | ACCTGC | 4 cut(s) | 398, 1988, 2770, 4028 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 1872, 2451 |
| BglII | AGATCT | 3 cut(s) | 1480, 1686, 3529 |
| Bme18I | GGWCC | 7 cut(s) | 1092, 1535, 1768, 2118, 2135, 2651, 4022 |
| BmeT110I | CYCGRG | 1 cut(s) | 2510 |
| BmiI | GGNNCC | 7 cut(s) | 508, 609, 1131, 1145, 1865, 2883, 3324 |
| BmrI | ACTGGG | 2 cut(s) | 1759, 2352 |
| BmuI | ACTGGG | 2 cut(s) | 1759, 2352 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2773 |
| BpiI | GAAGAC | 1 cut(s) | 3248 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 236, 268 |
| BpmI | CTGGAG | 4 cut(s) | 819, 897, 2910, 3762 |
| Bpu14I | TTCGAA | 1 cut(s) | 1291 |
| BpuEI | CTTGAG | 2 cut(s) | 238, 1397 |
| BsaAI | YACGTR | 2 cut(s) | 3662, 4049 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2304 |
| BsaI | GGTCTC | 3 cut(s) | 215, 231, 2687 |
| BsaJI | CCNNGG | 7 cut(s) | 313, 1010, 1623, 1867, 2654, 2903, 3229 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 643, 673 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 340, 341, 597, 1153, 2144, 2240, 2803 |
| Bse1I | ACTGG | 8 cut(s) | 54, 838, 1754, 1816, 2291, 2347, 2401, 3568 |
| Bse3DI | GCAATG | 2 cut(s) | 298, 4300 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2304 |
| BseDI | CCNNGG | 7 cut(s) | 313, 1010, 1623, 1867, 2654, 2903, 3229 |
| BseJI | GATNNNNATC | 1 cut(s) | 2304 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 340, 341, 597, 1153, 2144, 2240, 2803 |
| BseMI | GCAATG | 2 cut(s) | 298, 4300 |
| BseMII | CTCAG | 2 cut(s) | 1414, 2864 |
| BseNI | ACTGG | 8 cut(s) | 54, 838, 1754, 1816, 2291, 2347, 2401, 3568 |
| BseRI | GAGGAG | 4 cut(s) | 804, 894, 897, 2675 |
| BseSI | GKGCMC | 3 cut(s) | 487, 2456, 3166 |
| BseXI | GCAGC | 7 cut(s) | 317, 816, 970, 2983, 3175, 3900, 3928 |
| BseYI | CCCAGC | 2 cut(s) | 2375, 3991 |
| BsgI | GTGCAG | 3 cut(s) | 542, 873, 1206 |
| Bsh1236I | CGCG | 1 cut(s) | 3160 |
| BshNI | GGYRCC | 1 cut(s) | 506 |
| BsiHKAI | GWGCWC | 3 cut(s) | 249, 487, 3166 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2510 |
| BslFI | GGGAC | 1 cut(s) | 1003 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 340, 341, 597, 1153, 2144, 2240, 2803 |
| BsmAI | GTCTC | 9 cut(s) | 132, 215, 231, 1515, 2055, 2687, 3697, 3729, 4021 |
| BsmBI | CGTCTC | 1 cut(s) | 4021 |
| BsmFI | GGGAC | 1 cut(s) | 1003 |
| BsmI | GAATGC | 4 cut(s) | 2447, 2960, 3030, 4144 |
| Bso31I | GGTCTC | 3 cut(s) | 215, 231, 2687 |
| BsoBI | CYCGRG | 1 cut(s) | 2510 |
| Bsp119I | TTCGAA | 1 cut(s) | 1291 |
| Bsp1286I | GDGCHC | 8 cut(s) | 249, 487, 530, 639, 1288, 2456, 2488, 3166 |
| Bsp1407I | TGTACA | 2 cut(s) | 2860, 4287 |
| Bsp19I | CCATGG | 3 cut(s) | 1623, 1867, 2654 |
| BspCNI | CTCAG | 2 cut(s) | 1413, 2863 |
| BspFNI | CGCG | 1 cut(s) | 3160 |
| BspHI | TCATGA | 1 cut(s) | 3363 |
| BspLI | GGNNCC | 7 cut(s) | 508, 609, 1131, 1145, 1865, 2883, 3324 |
| BspMAI | CTGCAG | 4 cut(s) | 988, 1999, 2740, 3918 |
| BspMI | ACCTGC | 4 cut(s) | 398, 1988, 2770, 4028 |
| BspPI | GGATC | 8 cut(s) | 602, 615, 1549, 1738, 2155, 3025, 3855, 4284 |
| BspQI | GCTCTTC | 2 cut(s) | 1239, 1293 |
| BspT104I | TTCGAA | 1 cut(s) | 1291 |
| BspT107I | GGYRCC | 1 cut(s) | 506 |
| BspTI | CTTAAG | 2 cut(s) | 3179, 3766 |
| BspTNI | GGTCTC | 3 cut(s) | 215, 231, 2687 |
| BsrBI | CCGCTC | 1 cut(s) | 193 |
| BsrDI | GCAATG | 2 cut(s) | 298, 4300 |
| BsrGI | TGTACA | 2 cut(s) | 2860, 4287 |
| BsrI | ACTGG | 8 cut(s) | 54, 838, 1754, 1816, 2291, 2347, 2401, 3568 |
| BssECI | CCNNGG | 7 cut(s) | 313, 1010, 1623, 1867, 2654, 2903, 3229 |
| BssNAI | GTATAC | 1 cut(s) | 4122 |
| BssSI | CACGAG | 1 cut(s) | 196 |
| BssT1I | CCWWGG | 4 cut(s) | 1623, 1867, 2654, 2903 |
| Bst1107I | GTATAC | 1 cut(s) | 4122 |
| Bst2BI | CACGAG | 1 cut(s) | 196 |
| Bst4CI | ACNGT | 9 cut(s) | 1568, 1604, 2215, 2542, 3168, 3341, 3936, 4032, 4218 |
| Bst6I | CTCTTC | 5 cut(s) | 1239, 1293, 1686, 1780, 3339 |
| BstAFI | CTTAAG | 2 cut(s) | 3179, 3766 |
| BstAPI | GCANNNNNTGC | 4 cut(s) | 983, 1214, 3500, 4043 |
| BstAUI | TGTACA | 2 cut(s) | 2860, 4287 |
| BstBAI | YACGTR | 2 cut(s) | 3662, 4049 |
| BstBI | TTCGAA | 1 cut(s) | 1291 |
| BstC8I | GCNNGC | 9 cut(s) | 917, 979, 1384, 2036, 2500, 3143, 3162, 3210, 3479 |
| BstDEI | CTNAG | 7 cut(s) | 672, 1400, 2066, 2708, 2850, 3506, 3949 |
| BstDSI | CCRYGG | 3 cut(s) | 1623, 1867, 2654 |
| BstFNI | CGCG | 1 cut(s) | 3160 |
| BstH2I | RGCGCY | 4 cut(s) | 984, 1350, 2035, 3620 |
| BstHHI | GCGC | 5 cut(s) | 83, 983, 1349, 2034, 3619 |
| BstMAI | GTCTC | 9 cut(s) | 132, 215, 231, 1515, 2055, 2687, 3697, 3729, 4021 |
| BstNSI | RCATGY | 4 cut(s) | 2605, 3494, 3527, 4107 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2773 |
| BstSFI | CTRYAG | 6 cut(s) | 984, 1761, 1995, 2736, 3025, 3914 |
| BstSLI | GKGCMC | 3 cut(s) | 487, 2456, 3166 |
| BstUI | CGCG | 1 cut(s) | 3160 |
| BstV1I | GCAGC | 7 cut(s) | 317, 816, 970, 2983, 3175, 3900, 3928 |
| BstV2I | GAAGAC | 1 cut(s) | 3248 |
| BstX2I | RGATCY | 8 cut(s) | 607, 1480, 1541, 1686, 1730, 2147, 3529, 3847 |
| BstXI | CCANNNNNNTGG | 4 cut(s) | 618, 1126, 1778, 3060 |
| BstYI | RGATCY | 8 cut(s) | 607, 1480, 1541, 1686, 1730, 2147, 3529, 3847 |
| BstZ17I | GTATAC | 1 cut(s) | 4122 |
| BtgI | CCRYGG | 3 cut(s) | 1623, 1867, 2654 |
| BtsI | GCAGTG | 2 cut(s) | 861, 1972 |
| BveI | ACCTGC | 4 cut(s) | 398, 1988, 2770, 4028 |
| Cac8I | GCNNGC | 9 cut(s) | 917, 979, 1384, 2036, 2500, 3143, 3162, 3210, 3479 |
| CaiI | CAGNNNCTG | 1 cut(s) | 983 |
| CciI | TCATGA | 1 cut(s) | 3363 |
| CfoI | GCGC | 5 cut(s) | 83, 983, 1349, 2034, 3619 |
| CsiI | ACCWGGT | 1 cut(s) | 1500 |
| Csp6I | GTAC | 4 cut(s) | 1007, 2747, 2861, 4288 |
| CviQI | GTAC | 4 cut(s) | 1007, 2747, 2861, 4288 |
| DdeI | CTNAG | 7 cut(s) | 672, 1400, 2066, 2708, 2850, 3506, 3949 |
| DraI | TTTAAA | 1 cut(s) | 3778 |
| DraIII | CACNNNGTG | 1 cut(s) | 2525 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 2229 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 2229 |
| EaeI | YGGCCR | 3 cut(s) | 51, 3625, 3838 |
| Eam1104I | CTCTTC | 5 cut(s) | 1239, 1293, 1686, 1780, 3339 |
| EarI | CTCTTC | 5 cut(s) | 1239, 1293, 1686, 1780, 3339 |
| EciI | GGCGGA | 3 cut(s) | 159, 1629, 2262 |
| Ecl136II | GAGCTC | 1 cut(s) | 247 |
| Eco130I | CCWWGG | 4 cut(s) | 1623, 1867, 2654, 2903 |
| Eco147I | AGGCCT | 1 cut(s) | 2405 |
| Eco24I | GRGCYC | 5 cut(s) | 249, 530, 639, 1288, 2488 |
| Eco31I | GGTCTC | 3 cut(s) | 215, 231, 2687 |
| Eco32I | GATATC | 3 cut(s) | 934, 1105, 2597 |
| Eco47I | GGWCC | 7 cut(s) | 1092, 1535, 1768, 2118, 2135, 2651, 4022 |
| Eco47III | AGCGCT | 2 cut(s) | 2033, 3618 |
| Eco53kI | GAGCTC | 1 cut(s) | 247 |
| Eco57I | CTGAAG | 1 cut(s) | 1667 |
| Eco88I | CYCGRG | 1 cut(s) | 2510 |
| EcoICRI | GAGCTC | 1 cut(s) | 247 |
| EcoO109I | RGGNCCY | 3 cut(s) | 1556, 2118, 2135 |
| EcoRI | GAATTC | 2 cut(s) | 98, 1321 |
| EcoRV | GATATC | 3 cut(s) | 934, 1105, 2597 |
| EcoT14I | CCWWGG | 4 cut(s) | 1623, 1867, 2654, 2903 |
| EcoT22I | ATGCAT | 3 cut(s) | 2305, 2962, 3637 |
| EcoT38I | GRGCYC | 5 cut(s) | 249, 530, 639, 1288, 2488 |
| ErhI | CCWWGG | 4 cut(s) | 1623, 1867, 2654, 2903 |
| Esp3I | CGTCTC | 1 cut(s) | 4021 |
| FaqI | GGGAC | 1 cut(s) | 1003 |
| FauI | CCCGC | 3 cut(s) | 498, 1853, 3272 |
| FauNDI | CATATG | 3 cut(s) | 613, 3214, 3514 |
| FbaI | TGATCA | 2 cut(s) | 3130, 4080 |
| FblI | GTMKAC | 2 cut(s) | 3079, 4121 |
| FriOI | GRGCYC | 5 cut(s) | 249, 530, 639, 1288, 2488 |
| FspBI | CTAG | 7 cut(s) | 501, 558, 1802, 1982, 2235, 2412, 3357 |
| GlaI | GCGC | 5 cut(s) | 82, 982, 1348, 2033, 3618 |
| GsaI | CCCAGC | 2 cut(s) | 2379, 3995 |
| GsuI | CTGGAG | 4 cut(s) | 819, 897, 2910, 3762 |
| HaeII | RGCGCY | 4 cut(s) | 984, 1350, 2035, 3620 |
| HhaI | GCGC | 5 cut(s) | 83, 983, 1349, 2034, 3619 |
| Hin6I | GCGC | 5 cut(s) | 81, 981, 1347, 2032, 3617 |
| HinP1I | GCGC | 5 cut(s) | 81, 981, 1347, 2032, 3617 |
| HincII | GTYRAC | 1 cut(s) | 3080 |
| HindII | GTYRAC | 1 cut(s) | 3080 |
| HindIII | AAGCTT | 2 cut(s) | 256, 2083 |
| HphI | GGTGA | 5 cut(s) | 52, 173, 779, 2309, 2909 |
| Hpy99I | CGWCG | 2 cut(s) | 1901, 3084 |
| HpyCH4III | ACNGT | 9 cut(s) | 1568, 1604, 2215, 2542, 3168, 3341, 3936, 4032, 4218 |
| HpyCH4IV | ACGT | 5 cut(s) | 465, 992, 2779, 3661, 4048 |
| HpyF3I | CTNAG | 7 cut(s) | 672, 1400, 2066, 2708, 2850, 3506, 3949 |
| HpySE526I | ACGT | 5 cut(s) | 465, 992, 2779, 3661, 4048 |
| HspAI | GCGC | 5 cut(s) | 81, 981, 1347, 2032, 3617 |
| Ksp22I | TGATCA | 2 cut(s) | 3130, 4080 |
| LguI | GCTCTTC | 2 cut(s) | 1239, 1293 |
| LmnI | GCTCC | 7 cut(s) | 297, 588, 1143, 2029, 2104, 2758, 3328 |
| Lsp1109I | GCAGC | 7 cut(s) | 317, 816, 970, 2983, 3175, 3900, 3928 |
| MabI | ACCWGGT | 1 cut(s) | 1500 |
| MaeI | CTAG | 7 cut(s) | 501, 558, 1802, 1982, 2235, 2412, 3357 |
| MaeII | ACGT | 5 cut(s) | 465, 992, 2779, 3661, 4048 |
| MbiI | CCGCTC | 1 cut(s) | 193 |
| MfeI | CAATTG | 2 cut(s) | 732, 3698 |
| MflI | RGATCY | 8 cut(s) | 607, 1480, 1541, 1686, 1730, 2147, 3529, 3847 |
| MhlI | GDGCHC | 8 cut(s) | 249, 487, 530, 639, 1288, 2456, 2488, 3166 |
| MlsI | TGGCCA | 3 cut(s) | 53, 3627, 3840 |
| MluNI | TGGCCA | 3 cut(s) | 53, 3627, 3840 |
| MlyI | GAGTC | 5 cut(s) | 175, 2863, 3085, 3376, 3699 |
| MmeI | TCCRAC | 6 cut(s) | 609, 696, 1513, 2262, 3918, 4173 |
| Mox20I | TGGCCA | 3 cut(s) | 53, 3627, 3840 |
| Mph1103I | ATGCAT | 3 cut(s) | 2305, 2962, 3637 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1248, 1632, 3114 |
| MscI | TGGCCA | 3 cut(s) | 53, 3627, 3840 |
| MslI | CAYNNNNRTG | 6 cut(s) | 315, 616, 1425, 2578, 3058, 3064 |
| Msp20I | TGGCCA | 3 cut(s) | 53, 3627, 3840 |
| MspA1I | CMGCKG | 3 cut(s) | 3477, 3919, 3995 |
| MspCI | CTTAAG | 2 cut(s) | 3179, 3766 |
| MunI | CAATTG | 2 cut(s) | 732, 3698 |
| Mva1269I | GAATGC | 4 cut(s) | 2447, 2960, 3030, 4144 |
| MvnI | CGCG | 1 cut(s) | 3160 |
| NcoI | CCATGG | 3 cut(s) | 1623, 1867, 2654 |
| NdeI | CATATG | 3 cut(s) | 613, 3214, 3514 |
| NlaIV | GGNNCC | 7 cut(s) | 508, 609, 1131, 1145, 1865, 2883, 3324 |
| NmeAIII | GCCGAG | 2 cut(s) | 90, 4216 |
| NmuCI | GTSAC | 3 cut(s) | 565, 2775, 3657 |
| NsiI | ATGCAT | 3 cut(s) | 2305, 2962, 3637 |
| NspI | RCATGY | 4 cut(s) | 2605, 3494, 3527, 4107 |
| NspV | TTCGAA | 1 cut(s) | 1291 |
| OliI | CACNNNNGTG | 1 cut(s) | 315 |
| PaeR7I | CTCGAG | 1 cut(s) | 2510 |
| PagI | TCATGA | 1 cut(s) | 3363 |
| PaqCI | CACCTGC | 1 cut(s) | 1988 |
| PceI | AGGCCT | 1 cut(s) | 2405 |
| PciI | ACATGT | 1 cut(s) | 3523 |
| PciSI | GCTCTTC | 2 cut(s) | 1239, 1293 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 161 |
| PctI | GAATGC | 4 cut(s) | 2447, 2960, 3030, 4144 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1248, 1632, 3114 |
| PfeI | GAWTC | 8 cut(s) | 262, 870, 1262, 2266, 2807, 2846, 3999, 4114 |
| PfoI | TCCNGGA | 2 cut(s) | 2802, 4160 |
| PleI | GAGTC | 5 cut(s) | 174, 2862, 3084, 3375, 3699 |
| PpsI | GAGTC | 5 cut(s) | 174, 2862, 3084, 3375, 3699 |
| Ppu21I | YACGTR | 2 cut(s) | 3662, 4049 |
| PpuMI | RGGWCCY | 2 cut(s) | 2118, 2135 |
| PscI | ACATGT | 1 cut(s) | 3523 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2773 |
| PshBI | ATTAAT | 1 cut(s) | 2985 |
| Psp124BI | GAGCTC | 1 cut(s) | 249 |
| Psp1406I | AACGTT | 1 cut(s) | 465 |
| Psp5II | RGGWCCY | 2 cut(s) | 2118, 2135 |
| PspFI | CCCAGC | 2 cut(s) | 2375, 3991 |
| PspN4I | GGNNCC | 7 cut(s) | 508, 609, 1131, 1145, 1865, 2883, 3324 |
| PspPPI | RGGWCCY | 2 cut(s) | 2118, 2135 |
| PstI | CTGCAG | 4 cut(s) | 988, 1999, 2740, 3918 |
| PstNI | CAGNNNCTG | 1 cut(s) | 983 |
| PsuI | RGATCY | 8 cut(s) | 607, 1480, 1541, 1686, 1730, 2147, 3529, 3847 |
| PvuII | CAGCTG | 3 cut(s) | 3477, 3919, 3995 |
| RsaI | GTAC | 4 cut(s) | 1008, 2748, 2862, 4289 |
| RsaNI | GTAC | 4 cut(s) | 1007, 2747, 2861, 4288 |
| RseI | CAYNNNNRTG | 6 cut(s) | 315, 616, 1425, 2578, 3058, 3064 |
| SacI | GAGCTC | 1 cut(s) | 249 |
| SalI | GTCGAC | 1 cut(s) | 3078 |
| SapI | GCTCTTC | 2 cut(s) | 1239, 1293 |
| SchI | GAGTC | 5 cut(s) | 175, 2863, 3085, 3376, 3699 |
| SduI | GDGCHC | 8 cut(s) | 249, 487, 530, 639, 1288, 2456, 2488, 3166 |
| SexAI | ACCWGGT | 1 cut(s) | 1500 |
| SfcI | CTRYAG | 6 cut(s) | 984, 1761, 1995, 2736, 3025, 3914 |
| Sfr274I | CTCGAG | 1 cut(s) | 2510 |
| SfuI | TTCGAA | 1 cut(s) | 1291 |
| SinI | GGWCC | 7 cut(s) | 1092, 1535, 1768, 2118, 2135, 2651, 4022 |
| SlaI | CTCGAG | 1 cut(s) | 2510 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 315, 616, 1425, 2578, 3058, 3064 |
| SmlI | CTYRAG | 5 cut(s) | 253, 1376, 2510, 3179, 3766 |
| SmoI | CTYRAG | 5 cut(s) | 253, 1376, 2510, 3179, 3766 |
| SpeI | ACTAGT | 1 cut(s) | 500 |
| SseBI | AGGCCT | 1 cut(s) | 2405 |
| SspI | AATATT | 1 cut(s) | 364 |
| SspMI | CTAG | 7 cut(s) | 501, 558, 1802, 1982, 2235, 2412, 3357 |
| SstI | GAGCTC | 1 cut(s) | 249 |
| StuI | AGGCCT | 1 cut(s) | 2405 |
| StyI | CCWWGG | 4 cut(s) | 1623, 1867, 2654, 2903 |
| TaaI | ACNGT | 9 cut(s) | 1568, 1604, 2215, 2542, 3168, 3341, 3936, 4032, 4218 |
| TaiI | ACGT | 5 cut(s) | 468, 995, 2782, 3664, 4051 |
| TaqI | TCGA | 9 cut(s) | 123, 164, 1159, 1291, 2511, 2545, 2767, 3079, 3106 |
| TaqII | GACCGA | 3 cut(s) | 584, 3108, 4039 |
| TatI | WGTACW | 2 cut(s) | 2860, 4287 |
| TauI | GCSGC | 3 cut(s) | 175, 496, 3646 |
| TfiI | GAWTC | 8 cut(s) | 262, 870, 1262, 2266, 2807, 2846, 3999, 4114 |
| TseFI | GTSAC | 3 cut(s) | 565, 2775, 3657 |
| TseI | GCWGC | 8 cut(s) | 5, 330, 804, 983, 2996, 3188, 3913, 3916 |
| Tsp45I | GTSAC | 3 cut(s) | 565, 2775, 3657 |
| TspGWI | ACGGA | 3 cut(s) | 1914, 2091, 3097 |
| Vha464I | CTTAAG | 2 cut(s) | 3179, 3766 |
| VneI | GTGCAC | 2 cut(s) | 483, 3162 |
| VpaK11BI | GGWCC | 7 cut(s) | 1092, 1535, 1768, 2118, 2135, 2651, 4022 |
| VspI | ATTAAT | 1 cut(s) | 2985 |
| XapI | RAATTY | 9 cut(s) | 98, 374, 1167, 1321, 1432, 1462, 1904, 4165, 4269 |
| XceI | RCATGY | 4 cut(s) | 2605, 3494, 3527, 4107 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 3387 |
| XhoI | CTCGAG | 1 cut(s) | 2510 |
| XmiI | GTMKAC | 2 cut(s) | 3079, 4121 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1248, 1632, 3114 |
| XspI | CTAG | 7 cut(s) | 501, 558, 1802, 1982, 2235, 2412, 3357 |
| Zsp2I | ATGCAT | 3 cut(s) | 2305, 2962, 3637 |