Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0002500

Physical Location & Seq

Genomic Coordinates Forward (+)

5242416 .. 5248703

Gene Structure 6288 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom15g08360.14

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3150 bp

ATGGCTCGCCTCCGCCGTCCCACTCTCCTCATCGCATTCCTCTCCGCCCTGATAGCCTTAACTGCAAACCCTAGCCACCTCCTCCTCGCTTCCGTAGACGATGAGTTTACGATAACCGATTCCTCCGCCTCCGATTCCGATTCCTATCTCTTCCACCAAGACTACTCGCCGCCGGCTCCGCCACCTCCGCCGCCGCTCCCGCCGTCGGTATCGTGCATCGATGACCTCGGCGGCGTCGGCTCTCTGGATGCCACGTGTCAGATAGTCTCCGATTCGAACCTCACCAGCGATGTGTACATAACAGGGAAGGGCAGCTTTTATATCTTGCCCGGAGTGAGATTCGGCTGCACGATTCCTGGCTGCGCGATAATTATTAACATTACTGGCAACTTTAGTTTAGGCAGCAACGCGTCGCTTTTGGCTGGGGCTTTCGAGCTCACGGCGCACAATGCCAGCTTTCTCGAGGGCTCGGTGCTGAACACGACGGCGTTGGCGGGAAAGCCGCCGCCTCAGACGAGTGGGACTCCGCAGGGGATAGATGGGGCGGGAGGGGGACATGGAGGGCGGGGGGCGTCTTGTTTGGTGGACAAGAGGAAGCTTCCCGAGGACGTGTGGGGAGGGGATGCGTACTCGTGGTCATCACTGCAGAGGCCGGCTAGTTTTGGGAGCCGAGGCGGTTCGACCAGTAGGGAGGTAGATTATGGAGGTTTAGGGGGAGGGAGGGTGAGACTGCAAGTGAAGGAATTTCTGGTGGTGGAGGGGAGGGTTTTGGCTGAAGGAGGTGGCGGAGGGAATAGAGGTGGCGGTGGTTCTGGTGGCAGCATCTTCATTGAGGCTTATAAAATGACTGGTAGTGGCAGGATAAGTGCTTGTGGTGGTGATGGTTATGCTGGTGGTGGCGGTGGAAGAGTGTCAGTTGATGTCTATAGCAGGCATGATGACCCCCAAATTTGTGTGCATGGAGGAAATAGCTATGCTTGTCCAGAAAATGCAGGCGGGGCTGGGACTTTATATGATGCAGTTCCTCGAAGCCTTATTGTTAGCAATCATAACAAGTCAACAGATACAGAAACACTTCTTTTGGAGTTTCCTTATCAGCCTCTTTGGACAAATGTTTATATTCAGAATAAGGCTAGGGCCACTGTCCCATTGCTTTGGAGTCGTGTCCAGGTGCAAGGACAGATAAGCCTTTTGAGTGACGGTATGTTAAGCTTTGGACTTGAACATTATGCTTCATCAGAATTTGAGTTATTGGCTGAAGAATTGTTGATGAGCGACTCTGTAATCAAGGTGTATGGGGCCTTACGCATGACTGTAAAAATGTTCTTGATGTGGAATTCCAAGATACTCATAGATGGTGGGGGGGAAGAAGCTGTTGAGACATCCTCACTCGAGGCTAGCAACTTAGTTGTTCTCAGGGGATCATCTATGATACACTCTAATGCAAATCTGGGAGTTCATGGACAAGGTTTATTGAACTTGTCAGGACCTGGAGATGGGATTCAAGCACAACGTCTGGTTCTATCGCTATTCTACAGTATTCATGTTGGGCCTGGATCTTTTTTGCGTGGTCCTTTAGAGAATGCCACAACTGATTCTGTGACACCAAAGCTTTATTGTGAAAACGAAGATTGTCCCTATGAGCTACTTCATCCACCTGAAGATTGCAATGTGAACTCATCCCTGTCCTTTACTCTTAAGGTATGCCGAGTTGAAGATATCATTATTGAAGGCCTCATAGAAGGATCTGTTGTTCATTTTCACCGGGCAAGGACCATTGCTATCCATTCTTATGGAGAAATAAGTGCATCAGGAATGGGTTGTGCTGGTGGTATTGGCAGTGGCAACATGTTAAGCAATGGAATTGGCAGTGGTGGGGGGCATGGAGGTAAAGGTGGGGCTGCATGTTATAATGGCAGTTGTGTTGAGGGTGGAATCTCATATGGGAATGCGAAGTTGCCTTGTGAACTTGGTAGTGGAAGTGGATATGACTTTTCAGTTGGCTTAACCGCTGGCGGTGGTATTATCGTAATGGGTTCTTTAGAACATCCCTTGTCAAGTTTGTCTGTTGAAGGCTCGATGACAGCTGATGGTGAAAGTTTTGAAGGGACTTCTGTGAAGGAAAAGTTTGCCCTTGCTGATAATACAACTGGAGGCCCTGGGGGTGGGTCTGGTGGAACTATACTTTTGTTCTTGCAAACACTATACCTTGGTGAGACTGCCGTTCTTTCAAGTGTTGGGGGATATGTTAGTTCAATTGGTGGTGGTGGAGGTGGTGGTGGTGGAAGGATTCATTTTCATTGGTCAGATATTCCCACTGGAGATGTGTATCAGCCCATTGCAAGTGTGGACGGAAGCATCCTTGCAGGGGGAGGGGTGGGTGGAGACCAGGGTGGTGCTGGAGAAAATGGAACAGTGACGGGTAAAGCTTGCCCAAAAGGTCTTTATGGGACCTTTTGTGAGGCATGTCCAGTTGGCACTTATAAGAATGCTATTGGGTCAGATAGAGCACTTTGTCATCATTGTCCTGCTACTGAGCTTCCCCTTCGTGCAATTTATATATCTGTCCGAGGTGGTGTTGCAGAGGCTCCTTGTCCTTACAAATGCATTTCAGACAGATATCACATGCCACACTGTTATACAGCTCTTGAAGAATTGATTTACACATTTGGTGGGCCTTGGCTGTTTGGTCTTCTTCTGATTGGGCTCCTCATCCTGTTGGCTTTGGTGCTCAGTGTTGCACGTATGAAATTGGTTGGTGTTGATGAATTACCAGGCCCTGCTCCCACTCAACATGGCTCACAAATAGACCACTCTTTCCCTTTCCTGGAGTCATTGAATGAGGTTTTAGAAACAAACAGGGCTGAGGAGTCACAGAGCCATGTGCACCGGATGTATTTTATGGGTCCTAATACTTTTGGGGATCCTTGGCATTTGACTCACACTCCTCCAGAACAAATAAAAGAGATTGTATATGAGGGGCCATTCAATACATTTGTCGATGGGATTAATTCCATAGCCACTTATCAATGGTGGGAGGGAGCAATGTACAGCATTCTCTCTATTCTTGCATACCCCCTTGCATGGTCATGGCAGCAGTGGCGCCGAAGACTGAAACTGCAACGTCTGCGTGAATTTGTTCGATCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

1050

Amino Acids

109.92

Weight (kDa)

5.27

Isoelectric Point (pI)

40.64

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002500)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G32920 AT4G32920 AT4G32920 AT5G11700 AT5G11700
fragaria_vesca	FvH4_1g06620 FvH4_2g35120 FvH4_2g35120 FvH4_2g35120 FvH4_2g35120
malus_domestica	MD02G1069200.v1.1 MD08G1108700.v1.1 MD15G1089200.v1.1 MD15G1200900.v1.1
prunus_persica	Prupe.1G443300_v2.0.a1 Prupe.1G443300_v2.0.a1 Prupe.1G443300_v2.0.a1 Prupe.7G216400_v2.0.a1 Prupe.7G216400_v2.0.a1
pyrus_communis	pycom02g05480 pycom08g09060 pycom15g08360
rosa_chinensis	RchiOBHm_Chr2g0092351 RchiOBHm_Chr6g0306851
rosa_laevigata	RLG00000010761 RLG00000016302
rosa_multiflora	Rmu_sc0009381.1_g000004
rosa_roxburghii	Rroxscaffold_2G00149210 Rroxscaffold_7G00161420
rosa_rugosa	Rorug02G0025200.1 Rorug06G0353500
rosa_samantha	Rh2AG071100 Rh2BG070700 Rh2CG072100 Rh2DG069600 Rh6AG465300 Rh6BG435500 Rh6CG479700 Rh6DG466700
rosa_wichuraiana	Rw2G006120 Rw6G040550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	840, 1911, 2484
AccB1I	GGYRCC	1 cut(s)	3102
AccBSI	CCGCTC	1 cut(s)	196
AccI	GTMKAC	1 cut(s)	96
AccII	CGCG	2 cut(s)	365, 410
AclWI	GGATC	5 cut(s)	1429, 1564, 1753, 2918, 2931
AcsI	RAATTY	5 cut(s)	743, 948, 1241, 1336, 3134
AcuI	CTGAAG	3 cut(s)	795, 1278, 1680
AcvI	CACGTG	1 cut(s)	255
AcyI	GRCGYC	3 cut(s)	234, 572, 3103
AfaI	GTAC	3 cut(s)	296, 629, 3050
AfiI	CCNNNNNNNGG	6 cut(s)	205, 1496, 2165, 2368, 2827, 3084
AflII	CTTAAG	1 cut(s)	1697
AflIII	ACRYGT	4 cut(s)	254, 408, 609, 1848
AjiI	CACGTC	1 cut(s)	610
AjnI	CCWGG	8 cut(s)	355, 1167, 1489, 1552, 2158, 2388, 2773, 2826
AloI	GAACNNNNNNTCC	2 cut(s)	1737, 1769
Alw21I	GWGCWC	4 cut(s)	438, 2512, 2733, 2889
Alw26I	GTCTC	5 cut(s)	271, 721, 1373, 2210, 2379
Alw44I	GTGCAC	1 cut(s)	2885
AlwI	GGATC	5 cut(s)	1429, 1564, 1753, 2918, 2931
AlwNI	CAGNNNCTG	2 cut(s)	1490, 2780
Ama87I	CYCGRG	3 cut(s)	461, 602, 1391
AoxI	GGCC	9 cut(s)	650, 1137, 1299, 1550, 1732, 2155, 2675, 2776, 2981
ApaLI	GTGCAC	1 cut(s)	2885
ApeKI	GCWGC	7 cut(s)	312, 345, 360, 402, 819, 1901, 3094
ApoI	RAATTY	5 cut(s)	743, 948, 1241, 1336, 3134
AseI	ATTAAT	1 cut(s)	3009
Asp700I	GAANNNNTTC	2 cut(s)	1074, 3138
AspLEI	GCGC	3 cut(s)	365, 445, 3105
AsuC2I	CCSGG	2 cut(s)	330, 1766
AsuHPI	GGTGA	6 cut(s)	274, 736, 890, 1754, 2105, 2225
AsuII	TTCGAA	1 cut(s)	275
AsuNHI	GCTAGC	1 cut(s)	1397
AvaI	CYCGRG	3 cut(s)	461, 602, 1391
AvaII	GGWCC	5 cut(s)	1487, 1571, 1773, 2451, 2906
BaeGI	GKGCMC	1 cut(s)	2889
BamHI	GGATCC	1 cut(s)	2923
BanI	GGYRCC	1 cut(s)	3102
BanII	GRGCYC	3 cut(s)	438, 470, 2709
BauI	CACGAG	1 cut(s)	631
BbrPI	CACGTG	1 cut(s)	255
BbsI	GAAGAC	2 cut(s)	2684, 3115
Bbv12I	GWGCWC	4 cut(s)	438, 2512, 2733, 2889
BbvCI	CCTCAGC	1 cut(s)	2865
BbvI	GCAGC	7 cut(s)	324, 332, 347, 414, 831, 1888, 3106
BccI	CCATC	6 cut(s)	533, 875, 1349, 1490, 2084, 2996
BceAI	ACGGC	4 cut(s)	187, 456, 501, 2207
BciT130I	CCWGG	8 cut(s)	357, 1169, 1491, 1554, 2160, 2390, 2775, 2828
BcnI	CCSGG	2 cut(s)	330, 1766
BcoDI	GTCTC	5 cut(s)	271, 721, 1373, 2210, 2379
BfaI	CTAG	4 cut(s)	72, 657, 1134, 1398
BfmI	CTRYAG	3 cut(s)	644, 925, 1534
BfoI	RGCGCY	1 cut(s)	3106
BfrI	CTTAAG	1 cut(s)	1697
Bme18I	GGWCC	5 cut(s)	1487, 1571, 1773, 2451, 2906
BmeT110I	CYCGRG	3 cut(s)	461, 602, 1391
BmgBI	CACGTC	1 cut(s)	610
BmsI	GCATC	7 cut(s)	225, 238, 613, 831, 1006, 1817, 2367
BmtI	GCTAGC	1 cut(s)	1401
BpiI	GAAGAC	2 cut(s)	2684, 3115
BplI	GAGNNNNNCTC	4 cut(s)	508, 540, 1370, 1402
BpmI	CTGGAG	6 cut(s)	1512, 2172, 2340, 2421, 2849, 2934
Bpu10I	CCTNAGC	1 cut(s)	2865
Bpu14I	TTCGAA	1 cut(s)	275
BpuMI	CCSGG	2 cut(s)	330, 1766
Bsa29I	ATCGAT	1 cut(s)	219
BsaAI	YACGTR	2 cut(s)	255, 2744
BsaBI	GATNNNNATC	2 cut(s)	144, 2328
BsaHI	GRCGYC	3 cut(s)	234, 572, 3103
BsaI	GGTCTC	1 cut(s)	2379
BsaWI	WCCGGW	1 cut(s)	2889
BsaXI	ACNNNNNCTCC	4 cut(s)	708, 738, 2929, 2959
Bsc4I	CCNNNNNNNGG	6 cut(s)	205, 1496, 2165, 2368, 2827, 3084
Bse118I	RCCGGY	2 cut(s)	172, 652
Bse1I	ACTGG	6 cut(s)	388, 684, 853, 2155, 2323, 2471
Bse3DI	GCAATG	6 cut(s)	1148, 1675, 1776, 1864, 2337, 3051
Bse8I	GATNNNNATC	2 cut(s)	144, 2328
BseBI	CCWGG	8 cut(s)	357, 1169, 1491, 1554, 2160, 2390, 2775, 2828
BseCI	ATCGAT	1 cut(s)	219
BseGI	GGATG	9 cut(s)	253, 628, 1382, 1651, 1679, 2047, 2358, 2712, 2898
BseJI	GATNNNNATC	2 cut(s)	144, 2328
BseLI	CCNNNNNNNGG	6 cut(s)	205, 1496, 2165, 2368, 2827, 3084
BseMI	GCAATG	6 cut(s)	1148, 1675, 1776, 1864, 2337, 3051
BseMII	CTCAG	5 cut(s)	524, 1429, 2526, 2746, 2856
BseNI	ACTGG	6 cut(s)	388, 684, 853, 2155, 2323, 2471
BseRI	GAGGAG	6 cut(s)	17, 71, 74, 2699, 2882, 2937
BseSI	GKGCMC	1 cut(s)	2889
BseXI	GCAGC	7 cut(s)	324, 332, 347, 414, 831, 1888, 3106
BseYI	CCCAGC	2 cut(s)	422, 1001
BsgI	GTGCAG	1 cut(s)	331
Bsh1236I	CGCG	2 cut(s)	365, 410
BshFI	GGCC	9 cut(s)	652, 1139, 1301, 1552, 1734, 2157, 2677, 2778, 2983
BshNI	GGYRCC	1 cut(s)	3102
BshVI	ATCGAT	1 cut(s)	219
BsiHKAI	GWGCWC	4 cut(s)	438, 2512, 2733, 2889
BsiHKCI	CYCGRG	3 cut(s)	461, 602, 1391
BsiSI	CCGG	5 cut(s)	173, 330, 653, 1765, 2890
BslFI	GGGAC	8 cut(s)	3, 535, 567, 1018, 1130, 1620, 2122, 2464
BslI	CCNNNNNNNGG	6 cut(s)	205, 1496, 2165, 2368, 2827, 3084
BsmAI	GTCTC	5 cut(s)	271, 721, 1373, 2210, 2379
BsmFI	GGGAC	8 cut(s)	3, 535, 567, 1018, 1130, 1620, 2122, 2464
BsmI	GAATGC	5 cut(s)	35, 1588, 1954, 2494, 3054
BsnI	GGCC	9 cut(s)	652, 1139, 1301, 1552, 1734, 2157, 2677, 2778, 2983
Bso31I	GGTCTC	1 cut(s)	2379
BsoBI	CYCGRG	3 cut(s)	461, 602, 1391
Bsp119I	TTCGAA	1 cut(s)	275
Bsp1286I	GDGCHC	6 cut(s)	438, 470, 2512, 2709, 2733, 2889
Bsp1407I	TGTACA	2 cut(s)	294, 3048
Bsp143I	GATC	5 cut(s)	1421, 1556, 1745, 2923, 3143
BspANI	GGCC	9 cut(s)	652, 1139, 1301, 1552, 1734, 2157, 2677, 2778, 2983
BspCNI	CTCAG	5 cut(s)	523, 1428, 2527, 2745, 2857
BspDI	ATCGAT	1 cut(s)	219
BspFNI	CGCG	2 cut(s)	365, 410
BspMAI	CTGCAG	1 cut(s)	648
BspOI	GCTAGC	1 cut(s)	1401
BspPI	GGATC	5 cut(s)	1429, 1564, 1753, 2918, 2931
BspT104I	TTCGAA	1 cut(s)	275
BspT107I	GGYRCC	1 cut(s)	3102
BspTI	CTTAAG	1 cut(s)	1697
BspTNI	GGTCTC	1 cut(s)	2379
BsrBI	CCGCTC	1 cut(s)	196
BsrDI	GCAATG	6 cut(s)	1148, 1675, 1776, 1864, 2337, 3051
BsrFI	RCCGGY	2 cut(s)	172, 652
BsrGI	TGTACA	2 cut(s)	294, 3048
BsrI	ACTGG	6 cut(s)	388, 684, 853, 2155, 2323, 2471
BssAI	RCCGGY	2 cut(s)	172, 652
BssMI	GATC	5 cut(s)	1421, 1556, 1745, 2923, 3143
BssNI	GRCGYC	3 cut(s)	234, 572, 3103
BssSI	CACGAG	1 cut(s)	631
BssT1I	CCWWGG	3 cut(s)	2209, 2678, 2927
Bst2BI	CACGAG	1 cut(s)	631
Bst2UI	CCWGG	8 cut(s)	357, 1169, 1491, 1554, 2160, 2390, 2775, 2828
Bst4CI	ACNGT	6 cut(s)	1144, 1202, 1315, 1538, 2416, 2636
Bst6I	CTCTTC	2 cut(s)	155, 901
BstACI	GRCGYC	3 cut(s)	234, 572, 3103
BstAFI	CTTAAG	1 cut(s)	1697
BstAPI	GCANNNNNTGC	1 cut(s)	3127
BstAUI	TGTACA	2 cut(s)	294, 3048
BstBAI	YACGTR	2 cut(s)	255, 2744
BstBI	TTCGAA	1 cut(s)	275
BstC8I	GCNNGC	9 cut(s)	7, 174, 454, 654, 932, 994, 1399, 2014, 2431
BstDEI	CTNAG	6 cut(s)	510, 1405, 1415, 2535, 2732, 2865
BstF5I	GGATG	9 cut(s)	253, 628, 1382, 1651, 1679, 2047, 2358, 2712, 2898
BstFNI	CGCG	2 cut(s)	365, 410
BstH2I	RGCGCY	1 cut(s)	3106
BstHHI	GCGC	3 cut(s)	365, 445, 3105
BstKTI	GATC	5 cut(s)	1424, 1559, 1748, 2926, 3146
BstMAI	GTCTC	5 cut(s)	271, 721, 1373, 2210, 2379
BstMBI	GATC	5 cut(s)	1421, 1556, 1745, 2923, 3143
BstNI	CCWGG	8 cut(s)	357, 1169, 1491, 1554, 2160, 2390, 2775, 2828
BstNSI	RCATGY	4 cut(s)	1852, 1908, 2469, 2629
BstSFI	CTRYAG	3 cut(s)	644, 925, 1534
BstSLI	GKGCMC	1 cut(s)	2889
BstUI	CGCG	2 cut(s)	365, 410
BstV1I	GCAGC	7 cut(s)	324, 332, 347, 414, 831, 1888, 3106
BstV2I	GAAGAC	2 cut(s)	2684, 3115
BstX2I	RGATCY	3 cut(s)	1556, 1745, 2923
BstXI	CCANNNNNNTGG	2 cut(s)	1155, 1793
BstYI	RGATCY	3 cut(s)	1556, 1745, 2923
Bsu15I	ATCGAT	1 cut(s)	219
BsuRI	GGCC	9 cut(s)	652, 1139, 1301, 1552, 1734, 2157, 2677, 2778, 2983
BsuTUI	ATCGAT	1 cut(s)	219
BtgZI	GCGATG	2 cut(s)	16, 303
BtrI	CACGTC	1 cut(s)	610
BtsCI	GGATG	9 cut(s)	253, 628, 1382, 1651, 1679, 2047, 2358, 2712, 2898
BtsI	GCAGTG	4 cut(s)	641, 1846, 1876, 3104
BtsIMutI	CAGTG	9 cut(s)	641, 1140, 1846, 1876, 2316, 2421, 2632, 2740, 3104
Cac8I	GCNNGC	9 cut(s)	7, 174, 454, 654, 932, 994, 1399, 2014, 2431
CaiI	CAGNNNCTG	2 cut(s)	1490, 2780
CfoI	GCGC	3 cut(s)	365, 445, 3105
Cfr10I	RCCGGY	2 cut(s)	172, 652
ClaI	ATCGAT	1 cut(s)	219
CseI	GACGC	3 cut(s)	223, 399, 561
Csp6I	GTAC	3 cut(s)	295, 628, 3049
CviQI	GTAC	3 cut(s)	295, 628, 3049
DdeI	CTNAG	6 cut(s)	510, 1405, 1415, 2535, 2732, 2865
DinI	GGCGCC	1 cut(s)	3104
DpnI	GATC	5 cut(s)	1423, 1558, 1747, 2925, 3145
DpnII	GATC	5 cut(s)	1421, 1556, 1745, 2923, 3143
Eam1104I	CTCTTC	2 cut(s)	155, 901
EarI	CTCTTC	2 cut(s)	155, 901
EciI	GGCGGA	5 cut(s)	34, 115, 168, 177, 801
Ecl136II	GAGCTC	1 cut(s)	436
Eco130I	CCWWGG	3 cut(s)	2209, 2678, 2927
Eco147I	AGGCCT	1 cut(s)	1734
Eco24I	GRGCYC	3 cut(s)	438, 470, 2709
Eco31I	GGTCTC	1 cut(s)	2379
Eco32I	GATATC	2 cut(s)	1720, 2621
Eco47I	GGWCC	5 cut(s)	1487, 1571, 1773, 2451, 2906
Eco53kI	GAGCTC	1 cut(s)	436
Eco57I	CTGAAG	3 cut(s)	795, 1278, 1680
Eco72I	CACGTG	1 cut(s)	255
Eco88I	CYCGRG	3 cut(s)	461, 602, 1391
EcoICRI	GAGCTC	1 cut(s)	436
EcoO109I	RGGNCCY	6 cut(s)	1299, 1487, 2156, 2451, 2777, 2906
EcoRI	GAATTC	1 cut(s)	1336
EcoRII	CCWGG	8 cut(s)	355, 1167, 1489, 1552, 2158, 2388, 2773, 2826
EcoRV	GATATC	2 cut(s)	1720, 2621
EcoT14I	CCWWGG	3 cut(s)	2209, 2678, 2927
EcoT22I	ATGCAT	1 cut(s)	2609
EcoT38I	GRGCYC	3 cut(s)	438, 470, 2709
EgeI	GGCGCC	1 cut(s)	3104
EheI	GGCGCC	1 cut(s)	3104
ErhI	CCWWGG	3 cut(s)	2209, 2678, 2927
FalI	AAGNNNNNCTT	2 cut(s)	299, 331
FaqI	GGGAC	8 cut(s)	3, 535, 567, 1018, 1130, 1620, 2122, 2464
FauI	CCCGC	5 cut(s)	207, 487, 538, 558, 989
FauNDI	CATATG	1 cut(s)	1942
FblI	GTMKAC	1 cut(s)	96
FokI	GGATG	9 cut(s)	260, 635, 1369, 1638, 1666, 2034, 2345, 2699, 2905
FriOI	GRGCYC	3 cut(s)	438, 470, 2709
FspBI	CTAG	4 cut(s)	72, 657, 1134, 1398
GlaI	GCGC	3 cut(s)	364, 444, 3104
GsaI	CCCAGC	2 cut(s)	426, 1005
GsuI	CTGGAG	6 cut(s)	1512, 2172, 2340, 2421, 2849, 2934
HaeII	RGCGCY	1 cut(s)	3106
HaeIII	GGCC	9 cut(s)	652, 1139, 1301, 1552, 1734, 2157, 2677, 2778, 2983
HapII	CCGG	5 cut(s)	173, 330, 653, 1765, 2890
HgaI	GACGC	3 cut(s)	223, 399, 561
HhaI	GCGC	3 cut(s)	365, 445, 3105
Hin1I	GRCGYC	3 cut(s)	234, 572, 3103
Hin6I	GCGC	3 cut(s)	363, 443, 3103
HinP1I	GCGC	3 cut(s)	363, 443, 3103
HincII	GTYRAC	1 cut(s)	1059
HindII	GTYRAC	1 cut(s)	1059
HindIII	AAGCTT	4 cut(s)	596, 1210, 1610, 2427
HpaII	CCGG	5 cut(s)	173, 330, 653, 1765, 2890
HphI	GGTGA	6 cut(s)	274, 736, 890, 1754, 2105, 2225
Hpy166II	GTNNAC	9 cut(s)	97, 108, 295, 586, 1059, 1675, 1967, 2350, 2887
Hpy188III	TCNNGA	9 cut(s)	245, 461, 602, 983, 1327, 1485, 1812, 2648, 2951
Hpy8I	GTNNAC	9 cut(s)	97, 108, 295, 586, 1059, 1675, 1967, 2350, 2887
Hpy99I	CGWCG	4 cut(s)	208, 239, 415, 487
HpyCH4III	ACNGT	6 cut(s)	1144, 1202, 1315, 1538, 2416, 2636
HpyCH4IV	ACGT	5 cut(s)	254, 609, 1513, 2743, 3124
HpyF3I	CTNAG	6 cut(s)	510, 1405, 1415, 2535, 2732, 2865
HpySE526I	ACGT	5 cut(s)	254, 609, 1513, 2743, 3124
Hsp92I	GRCGYC	3 cut(s)	234, 572, 3103
HspAI	GCGC	3 cut(s)	363, 443, 3103
KasI	GGCGCC	1 cut(s)	3102
KroI	GCCGGC	2 cut(s)	172, 652
KroNI	GCCGGC	2 cut(s)	174, 654
Kzo9I	GATC	5 cut(s)	1421, 1556, 1745, 2923, 3143
LmnI	GCTCC	7 cut(s)	181, 201, 666, 2593, 2712, 2788, 3041
Lsp1109I	GCAGC	7 cut(s)	324, 332, 347, 414, 831, 1888, 3106
LweI	GCATC	7 cut(s)	225, 238, 613, 831, 1006, 1817, 2367
MaeI	CTAG	4 cut(s)	72, 657, 1134, 1398
MaeII	ACGT	5 cut(s)	254, 609, 1513, 2743, 3124
MaeIII	GTNAC	4 cut(s)	1196, 1600, 2416, 2871
MalI	GATC	5 cut(s)	1423, 1558, 1747, 2925, 3145
MbiI	CCGCTC	1 cut(s)	196
MboI	GATC	5 cut(s)	1421, 1556, 1745, 2923, 3143
MfeI	CAATTG	1 cut(s)	2256
MflI	RGATCY	3 cut(s)	1556, 1745, 2923
MhlI	GDGCHC	6 cut(s)	438, 470, 2512, 2709, 2733, 2889
MluI	ACGCGT	1 cut(s)	408
Mly113I	GGCGCC	1 cut(s)	3103
MlyI	GAGTC	6 cut(s)	517, 1168, 1271, 2840, 2879, 2932
Mph1103I	ATGCAT	1 cut(s)	2609
MroNI	GCCGGC	2 cut(s)	172, 652
MroXI	GAANNNNTTC	2 cut(s)	1074, 3138
MseI	TTAA	7 cut(s)	59, 375, 1208, 1698, 1853, 2006, 3009
MslI	CAYNNNNRTG	3 cut(s)	1440, 1791, 3088
MspA1I	CMGCKG	2 cut(s)	2012, 2087
MspCI	CTTAAG	1 cut(s)	1697
MspI	CCGG	5 cut(s)	173, 330, 653, 1765, 2890
MunI	CAATTG	1 cut(s)	2256
Mva1269I	GAATGC	5 cut(s)	35, 1588, 1954, 2494, 3054
MvaI	CCWGG	8 cut(s)	357, 1169, 1491, 1554, 2160, 2390, 2775, 2828
MvnI	CGCG	2 cut(s)	365, 410
NaeI	GCCGGC	2 cut(s)	174, 654
NarI	GGCGCC	1 cut(s)	3103
NciI	CCSGG	2 cut(s)	330, 1766
NdeI	CATATG	1 cut(s)	1942
NdeII	GATC	5 cut(s)	1421, 1556, 1745, 2923, 3143
NgoMIV	GCCGGC	2 cut(s)	172, 652
NheI	GCTAGC	1 cut(s)	1397
NmeAIII	GCCGAG	3 cut(s)	207, 695, 1733
NmuCI	GTSAC	4 cut(s)	1196, 1600, 2416, 2871
NsiI	ATGCAT	1 cut(s)	2609
NspI	RCATGY	4 cut(s)	1852, 1908, 2469, 2629
NspV	TTCGAA	1 cut(s)	275
PaeR7I	CTCGAG	2 cut(s)	461, 1391
PasI	CCCWGGG	1 cut(s)	2159
PceI	AGGCCT	1 cut(s)	1734
PciI	ACATGT	1 cut(s)	1848
PcsI	WCGNNNNNNNCGW	1 cut(s)	13
PctI	GAATGC	5 cut(s)	35, 1588, 1954, 2494, 3054
PdiI	GCCGGC	2 cut(s)	174, 654
PdmI	GAANNNNTTC	2 cut(s)	1074, 3138
PfoI	TCCNGGA	1 cut(s)	2826
PleI	GAGTC	6 cut(s)	517, 1167, 1271, 2839, 2878, 2932
PluTI	GGCGCC	1 cut(s)	3106
PmaCI	CACGTG	1 cut(s)	255
PmlI	CACGTG	1 cut(s)	255
PpsI	GAGTC	6 cut(s)	517, 1167, 1271, 2839, 2878, 2932
Ppu21I	YACGTR	2 cut(s)	255, 2744
PpuMI	RGGWCCY	3 cut(s)	1487, 2451, 2906
PscI	ACATGT	1 cut(s)	1848
PshBI	ATTAAT	1 cut(s)	3009
PsiI	TTATAA	3 cut(s)	840, 1911, 2484
Psp124BI	GAGCTC	1 cut(s)	438
Psp5II	RGGWCCY	3 cut(s)	1487, 2451, 2906
Psp6I	CCWGG	8 cut(s)	355, 1167, 1489, 1552, 2158, 2388, 2773, 2826
PspCI	CACGTG	1 cut(s)	255
PspFI	CCCAGC	2 cut(s)	422, 1001
PspGI	CCWGG	8 cut(s)	355, 1167, 1489, 1552, 2158, 2388, 2773, 2826
PspPPI	RGGWCCY	3 cut(s)	1487, 2451, 2906
PspXI	VCTCGAGB	1 cut(s)	1391
PstI	CTGCAG	1 cut(s)	648
PstNI	CAGNNNCTG	2 cut(s)	1490, 2780
PsuI	RGATCY	3 cut(s)	1556, 1745, 2923
PvuII	CAGCTG	1 cut(s)	2087
RsaI	GTAC	3 cut(s)	296, 629, 3050
RsaNI	GTAC	3 cut(s)	295, 628, 3049
RseI	CAYNNNNRTG	3 cut(s)	1440, 1791, 3088
SacI	GAGCTC	1 cut(s)	438
SaqAI	TTAA	7 cut(s)	59, 375, 1208, 1698, 1853, 2006, 3009
Sau3AI	GATC	5 cut(s)	1421, 1556, 1745, 2923, 3143
SchI	GAGTC	6 cut(s)	517, 1168, 1271, 2840, 2879, 2932
SduI	GDGCHC	6 cut(s)	438, 470, 2512, 2709, 2733, 2889
SfaNI	GCATC	7 cut(s)	225, 238, 613, 831, 1006, 1817, 2367
SfcI	CTRYAG	3 cut(s)	644, 925, 1534
SfoI	GGCGCC	1 cut(s)	3104
Sfr274I	CTCGAG	2 cut(s)	461, 1391
SfuI	TTCGAA	1 cut(s)	275
SinI	GGWCC	5 cut(s)	1487, 1571, 1773, 2451, 2906
SlaI	CTCGAG	2 cut(s)	461, 1391
SmiMI	CAYNNNNRTG	3 cut(s)	1440, 1791, 3088
SmlI	CTYRAG	3 cut(s)	461, 1391, 1697
SmoI	CTYRAG	3 cut(s)	461, 1391, 1697
SseBI	AGGCCT	1 cut(s)	1734
SspDI	GGCGCC	1 cut(s)	3102
SspMI	CTAG	4 cut(s)	72, 657, 1134, 1398
SstI	GAGCTC	1 cut(s)	438
StuI	AGGCCT	1 cut(s)	1734
StyI	CCWWGG	3 cut(s)	2209, 2678, 2927
TaaI	ACNGT	6 cut(s)	1144, 1202, 1315, 1538, 2416, 2636
TaiI	ACGT	5 cut(s)	257, 612, 1516, 2746, 3127
TatI	WGTACW	2 cut(s)	294, 3048
TauI	GCSGC	6 cut(s)	172, 193, 196, 234, 505, 508
Tru1I	TTAA	7 cut(s)	59, 375, 1208, 1698, 1853, 2006, 3009
Tru9I	TTAA	7 cut(s)	59, 375, 1208, 1698, 1853, 2006, 3009
TscAI	CASTG	9 cut(s)	648, 1147, 1846, 1876, 2323, 2421, 2639, 2740, 3104
TseFI	GTSAC	4 cut(s)	1196, 1600, 2416, 2871
TseI	GCWGC	7 cut(s)	312, 345, 360, 402, 819, 1901, 3094
Tsp45I	GTSAC	4 cut(s)	1196, 1600, 2416, 2871
TspGWI	ACGGA	2 cut(s)	82, 2367
TspRI	CASTG	9 cut(s)	648, 1147, 1846, 1876, 2323, 2421, 2639, 2740, 3104
Vha464I	CTTAAG	1 cut(s)	1697
VneI	GTGCAC	1 cut(s)	2885
VpaK11BI	GGWCC	5 cut(s)	1487, 1571, 1773, 2451, 2906
VspI	ATTAAT	1 cut(s)	3009
XapI	RAATTY	5 cut(s)	743, 948, 1241, 1336, 3134
XceI	RCATGY	4 cut(s)	1852, 1908, 2469, 2629
XcmI	CCANNNNNNNNNTGG	2 cut(s)	2344, 2396
XhoI	CTCGAG	2 cut(s)	461, 1391
XmiI	GTMKAC	1 cut(s)	96
XmnI	GAANNNNTTC	2 cut(s)	1074, 3138
XspI	CTAG	4 cut(s)	72, 657, 1134, 1398
Zsp2I	ATGCAT	1 cut(s)	2609

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.