AT4G33170

repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0007813
Physical Location & Seq
Reverse (-)
15995701 .. 15998796
3096 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G33170.1

Sequence Viewer

Length: 2973 bp
ATGCGATCAACCTCCAAGGCCATCCCTTTCTCCTTTCACACATCTCTCATTGTTCAATGTCTCCGTCCTCTGCGTTTTACTTCTGCTGCTTCGCCGTCTTCATCTTCCTCGTCTTCGTCACAATGGTTCGGCTTTCTTCGGAATGCAATCACCTCGTCGGACTTGATGCTCGGAAAATGTACACACGCACGTATCCTAACCTTCGAGGAAAACCCAGAACGATTCCTGATTAACAATCTCATCTCCATGTACTCCAAGTGTGGATCACTCACTTATGCTCGCCGAGTGTTCGATAAAATGCCTGACAGAGATCTTGTTTCCTGGAACTCGATTTTAGCTGCCTATGCTCAGTCTTCCGAATGCGTTGTCGAGAACATTCAACAAGCTTTTCTTCTTTTCAGGATATTACGCCAGGACGTTGTGTATACCAGTCGAATGACTCTGTCTCCAATGTTGAAACTTTGTTTGCATTCTGGGTATGTGTGGGCTTCAGAGTCATTTCATGGGTATGCTTGCAAGATTGGTTTGGACGGTGATGAATTTGTTGCCGGAGCTCTTGTTAACATATATTTGAAGTTTGGTAAGGTTAAGGAAGGTAAGGTTTTGTTTGAGGAGATGCCTTATAGAGATGTGGTGTTATGGAACTTGATGTTGAAGGCTTATCTGGAAATGGGTTTTAAGGAAGAAGCAATAGACCTCTCTTCTGCATTTCATTCAAGTGGTTTAAATCCCAATGAAATCACTCTGCGTTTACTTGCTAGAATTTCAGGTGATGATTCTGATGCAGGACAAGTGAAATCCTTTGCAAATGGTAATGATGCTTCTTCTGTTTCAGAAATAATATTCAGGAACAAAGGATTGAGTGAATATCTCCATTCAGGCCAGTATTCAGCTCTTCTCAAATGTTTTGCGGATATGGTAGAGTCCGACGTGGAATGTGATCAAGTCACATTTATTTTAATGTTAGCTACAGCTGTTAAAGTAGATAGTTTAGCATTAGGGCAGCAAGTTCATTGTATGGCATTGAAGTTAGGACTTGATTTGATGCTTACTGTTTCGAATAGTCTAATAAACATGTACTGTAAACTGAGAAAATTCGGTTTCGCTAGGACAGTATTTGACAATATGAGTGAACGAGATTTGATTTCGTGGAATTCAGTTATTGCCGGAATAGCTCAAAATGGCTTAGAAGTAGAAGCAGTGTGTCTGTTTATGCAGCTGTTACGTTGCGGCCTCAAACCAGACCAGTATACTATGACGAGTGTTCTAAAGGCTGCTTCTTCTCTTCCTGAAGGCTTGTCGTTGAGTAAACAAGTACATGTTCATGCAATTAAAATCAATAATGTTTCTGATAGTTTTGTCTCTACTGCTCTGATTGATGCCTACTCTCGGAACAGATGTATGAAAGAGGCAGAGATTTTGTTTGAGAGGCATAATTTTGATCTCGTCGCTTGGAATGCCATGATGGCTGGTTATACCCAAAGTCATGACGGTCATAAGACTCTGAAGCTTTTTGCTTTGATGCATAAACAGGGAGAGAGATCTGATGATTTCACGCTCGCAACAGTGTTTAAGACATGTGGTTTCTTGTTTGCCATAAATCAAGGAAAGCAAGTCCATGCTTATGCAATCAAATCTGGATATGACTTAGATCTATGGGTCAGCAGTGGGATTTTGGATATGTATGTAAAATGTGGCGATATGAGTGCAGCACAATTTGCCTTTGATAGTATTCCCGTACCTGACGATGTTGCTTGGACGACTATGATATCAGGATGCATAGAAAATGGAGAAGAAGAAAGAGCGTTTCATGTTTTTAGCCAGATGAGGCTCATGGGAGTGTTGCCTGATGAATTTACAATAGCCACACTTGCGAAAGCAAGCTCTTGTTTGACGGCATTAGAACAGGGGCGCCAAATTCATGCAAATGCCCTCAAGTTGAATTGTACGAATGACCCTTTCGTTGGAACTTCACTTGTGGACATGTATGCTAAGTGTGGAAGCATAGACGATGCATATTGTTTGTTTAAAAGAATAGAGATGATGAACATCACTGCCTGGAATGCCATGTTAGTGGGATTAGCTCAACATGGGGAAGGGAAAGAAACGCTCCAGCTTTTCAAACAGATGAAATCTCTGGGTATAAAACCTGATAAGGTCACATTTATCGGCGTTCTTTCTGCTTGCAGTCACTCAGGCTTGGTATCAGAGGCATACAAGCATATGCGATCAATGCATGGAGACTATGGCATTAAACCTGAAATAGAACACTACTCTTGTTTGGCTGATGCGCTTGGCCGTGCTGGACTTGTTAAACAGGCTGAAAATTTGATCGAGTCAATGTCCATGGAAGCTTCAGCATCGATGTACAGAACTTTGCTTGCAGCTTGCCGAGTTCAAGGGGACACAGAAACAGGGAAGAGAGTGGCAACTAAGCTTTTGGAGCTAGAGCCACTGGACTCATCAGCTTATGTTCTTTTATCCAATATGTATGCTGCTGCTTCCAAATGGGATGAGATGAAACTTGCCCGGACGATGATGAAAGGGCACAAAGTGAAAAAAGACCCGGGTTTCAGTTGGATCGAGGTGAAAAACAAGATACATATATTTGTCGTGGATGATAGGTCAAACCGGCAAACCGAGTTGATATACAGGAAAGTAAAAGACATGATAAGAGACATCAAACAAGAAGGGTATGTTCCTGAGACAGATTTCACACTTGTAGATGTGGAAGAAGAAGAGAAAGAGCGTGCCCTGTACTACCACAGTGAGAAGCTAGCAGTTGCTTTCGGACTTTTGAGCACTCCTCCATCCACACCAATCCGTGTGATTAAGAATCTACGCGTCTGTGGAGATTGTCACAACGCGATGAAATATATAGCAAAGGTGTATAATAGAGAGATTGTACTTAGAGATGCAAACCGGTTTCACCGGTTCAAGGATGGTATTTGCTCATGTGGTGATTATTGGTAG

Protein Analysis

990

Amino Acids

110.81

Weight (kDa)

6.61

Isoelectric Point (pI)

44.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 380 - 425 9.2e-07 PPR repeat family
PPR_2 PF13041 481 - 527 2.7e-06 PPR repeat family
PPR_2 PF13041 581 - 626 2e-09 PPR repeat family
PPR_2 PF13041 683 - 730 1.7e-10 PPR repeat family
E_motif PF20431 802 - 862 5.1e-17 E motif
DYW_deaminase PF14432 898 - 990 3.2e-43 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1911
AccI GTMKAC 2 cut(s) 425, 1250
AccII CGCG 2 cut(s) 2844, 2867
AciI CCGC 2 cut(s) 911, 1230
AclWI GGATC 2 cut(s) 271, 2588
AcoI YGGCCR 1 cut(s) 2296
AcsI RAATTY 7 cut(s) 539, 762, 1094, 1153, 1853, 1917, 2326
AcuI CTGAAG 4 cut(s) 474, 1311, 1526, 2340
AcyI GRCGYC 1 cut(s) 1912
AdeI CACNNNGTG 1 cut(s) 2554
AfaI GTAC 9 cut(s) 181, 251, 1079, 1317, 1740, 1948, 2369, 2759, 2907
AfiI CCNNNNNNNGG 3 cut(s) 1389, 1964, 2938
AflIII ACRYGT 5 cut(s) 1074, 1318, 1577, 1983, 2842
AgeI ACCGGT 2 cut(s) 2922, 2931
AjiI CACGTC 1 cut(s) 931
AjnI CCWGG 3 cut(s) 320, 411, 2057
Alw21I GWGCWC 2 cut(s) 556, 2804
Alw26I GTCTC 6 cut(s) 65, 450, 1366, 2235, 2670, 2699
AlwI GGATC 2 cut(s) 271, 2588
Ama87I CYCGRG 1 cut(s) 2566
AoxI GGCC 4 cut(s) 18, 880, 1231, 2296
ApeKI GCWGC 9 cut(s) 86, 338, 1003, 1216, 1274, 1709, 2384, 2495, 2498
ApoI RAATTY 7 cut(s) 539, 762, 1094, 1153, 1853, 1917, 2326
ArsI GACNNNNNNTTYG 2 cut(s) 351, 383
AsiGI ACCGGT 2 cut(s) 2922, 2931
AspLEI GCGC 2 cut(s) 1914, 2293
AsuC2I CCSGG 3 cut(s) 2530, 2567, 2568
AsuHPI GGTGA 6 cut(s) 142, 545, 782, 2599, 2921, 2972
AsuII TTCGAA 1 cut(s) 1058
AsuNHI GCTAGC 1 cut(s) 2776
AvaI CYCGRG 1 cut(s) 2566
BaeGI GKGCMC 2 cut(s) 2550, 2755
BaeI ACNNNNGTAYC 2 cut(s) 175, 208
BanI GGYRCC 1 cut(s) 1911
BanII GRGCYC 1 cut(s) 556
BarI GAAGNNNNNNTAC 2 cut(s) 805, 837
BbsI GAAGAC 3 cut(s) 90, 105, 345
Bbv12I GWGCWC 2 cut(s) 556, 2804
BbvI GCAGC 9 cut(s) 73, 325, 1015, 1228, 1261, 1721, 2396, 2482, 2485
BccI CCATC 4 cut(s) 29, 1459, 2818, 2936
BceAI ACGGC 3 cut(s) 79, 1911, 2283
BcgI CGANNNNNNTGC 4 cut(s) 135, 169, 1688, 1722
BciT130I CCWGG 3 cut(s) 322, 413, 2059
BciVI GTATCC 1 cut(s) 203
BclI TGATCA 1 cut(s) 940
BcnI CCSGG 3 cut(s) 2530, 2567, 2568
BcoDI GTCTC 6 cut(s) 65, 450, 1366, 2235, 2670, 2699
BfaI CTAG 4 cut(s) 759, 1107, 2447, 2777
BfmI CTRYAG 1 cut(s) 969
BfoI RGCGCY 1 cut(s) 1915
BfuI GTATCC 1 cut(s) 203
BglI GCCNNNNNGGC 1 cut(s) 1466
BglII AGATCT 3 cut(s) 310, 1541, 1651
Bme1390I CCNGG 6 cut(s) 322, 413, 2059, 2530, 2567, 2568
BmeT110I CYCGRG 1 cut(s) 2566
BmgBI CACGTC 1 cut(s) 931
BmiI GGNNCC 1 cut(s) 1913
BmrFI CCNGG 6 cut(s) 322, 413, 2059, 2530, 2567, 2568
BmtI GCTAGC 1 cut(s) 2780
BpiI GAAGAC 3 cut(s) 90, 105, 345
BplI GAGNNNNNCTC 2 cut(s) 2791, 2823
BpmI CTGGAG 1 cut(s) 2096
Bpu14I TTCGAA 1 cut(s) 1058
BpuEI CTTGAG 1 cut(s) 1919
BpuMI CCSGG 3 cut(s) 2530, 2567, 2568
Bsa29I ATCGAT 1 cut(s) 2363
BsaAI YACGTR 1 cut(s) 191
BsaBI GATNNNNATC 1 cut(s) 2048
BsaHI GRCGYC 1 cut(s) 1912
BsaJI CCNNGG 3 cut(s) 15, 2346, 2566
BsaWI WCCGGW 2 cut(s) 2922, 2931
BsaXI ACNNNNNCTCC 4 cut(s) 430, 460, 543, 573
Bsc4I CCNNNNNNNGG 3 cut(s) 1389, 1964, 2938
Bse118I RCCGGY 3 cut(s) 2631, 2922, 2931
Bse1I ACTGG 4 cut(s) 429, 883, 1246, 2460
Bse8I GATNNNNATC 1 cut(s) 2048
BseBI CCWGG 3 cut(s) 322, 413, 2059
BseCI ATCGAT 1 cut(s) 2363
BseDI CCNNGG 3 cut(s) 15, 2346, 2566
BseGI GGATG 6 cut(s) 21, 1781, 2518, 2623, 2810, 2947
BseJI GATNNNNATC 1 cut(s) 2048
BseLI CCNNNNNNNGG 3 cut(s) 1389, 1964, 2938
BseMII CTCAG 4 cut(s) 362, 1079, 2208, 2694
BseNI ACTGG 4 cut(s) 429, 883, 1246, 2460
BseRI GAGGAG 2 cut(s) 626, 2796
BseSI GKGCMC 2 cut(s) 2550, 2755
BseXI GCAGC 9 cut(s) 73, 325, 1015, 1228, 1261, 1721, 2396, 2482, 2485
BsgI GTGCAG 1 cut(s) 1728
Bsh1236I CGCG 2 cut(s) 2844, 2867
BshFI GGCC 4 cut(s) 20, 882, 1233, 2298
BshNI GGYRCC 1 cut(s) 1911
BshTI ACCGGT 2 cut(s) 2922, 2931
BshVI ATCGAT 1 cut(s) 2363
BsiHKAI GWGCWC 2 cut(s) 556, 2804
BsiHKCI CYCGRG 1 cut(s) 2566
BsiSI CCGG 7 cut(s) 549, 1167, 2530, 2567, 2632, 2923, 2932
BslFI GGGAC 1 cut(s) 2417
BslI CCNNNNNNNGG 3 cut(s) 1389, 1964, 2938
BsmAI GTCTC 6 cut(s) 65, 450, 1366, 2235, 2670, 2699
BsmFI GGGAC 1 cut(s) 2417
BsmI GAATGC 5 cut(s) 148, 365, 469, 1462, 2068
BsnI GGCC 4 cut(s) 20, 882, 1233, 2298
BsoBI CYCGRG 1 cut(s) 2566
Bsp119I TTCGAA 1 cut(s) 1058
Bsp1286I GDGCHC 4 cut(s) 556, 2550, 2755, 2804
Bsp1407I TGTACA 2 cut(s) 179, 2367
Bsp19I CCATGG 1 cut(s) 2346
BspACI CCGC 2 cut(s) 911, 1230
BspANI GGCC 4 cut(s) 20, 882, 1233, 2298
BspCNI CTCAG 4 cut(s) 361, 1080, 2207, 2695
BspDI ATCGAT 1 cut(s) 2363
BspFNI CGCG 2 cut(s) 2844, 2867
BspHI TCATGA 1 cut(s) 1486
BspLI GGNNCC 1 cut(s) 1913
BspOI GCTAGC 1 cut(s) 2780
BspPI GGATC 2 cut(s) 271, 2588
BspQI GCTCTTC 1 cut(s) 900
BspT104I TTCGAA 1 cut(s) 1058
BspT107I GGYRCC 1 cut(s) 1911
BsrFI RCCGGY 3 cut(s) 2631, 2922, 2931
BsrGI TGTACA 2 cut(s) 179, 2367
BsrI ACTGG 4 cut(s) 429, 883, 1246, 2460
BssAI RCCGGY 3 cut(s) 2631, 2922, 2931
BssECI CCNNGG 3 cut(s) 15, 2346, 2566
BssNAI GTATAC 2 cut(s) 426, 1251
BssNI GRCGYC 1 cut(s) 1912
BssT1I CCWWGG 2 cut(s) 15, 2346
Bst1107I GTATAC 2 cut(s) 426, 1251
Bst2UI CCWGG 3 cut(s) 322, 413, 2059
Bst4CI ACNGT 7 cut(s) 533, 1054, 1082, 1114, 1493, 1567, 2768
Bst6I CTCTTC 5 cut(s) 706, 900, 1290, 2414, 2733
BstACI GRCGYC 1 cut(s) 1912
BstAPI GCANNNNNTGC 1 cut(s) 1718
BstAUI TGTACA 2 cut(s) 179, 2367
BstBAI YACGTR 1 cut(s) 191
BstBI TTCGAA 1 cut(s) 1058
BstC8I GCNNGC 9 cut(s) 280, 514, 1560, 1882, 2185, 2382, 2389, 2751, 2778
BstDEI CTNAG 9 cut(s) 348, 1088, 1186, 1648, 1992, 2194, 2433, 2703, 2909
BstDSI CCRYGG 1 cut(s) 2346
BstF5I GGATG 6 cut(s) 21, 1781, 2518, 2623, 2810, 2947
BstFNI CGCG 2 cut(s) 2844, 2867
BstH2I RGCGCY 1 cut(s) 1915
BstHHI GCGC 2 cut(s) 1914, 2293
BstMAI GTCTC 6 cut(s) 65, 450, 1366, 2235, 2670, 2699
BstMWI GCNNNNNNNGC 9 cut(s) 344, 1172, 1457, 1466, 1718, 1871, 2063, 2233, 2443
BstNI CCWGG 3 cut(s) 322, 413, 2059
BstNSI RCATGY 4 cut(s) 1078, 1322, 1581, 1987
BstSCI CCNGG 6 cut(s) 320, 411, 2057, 2528, 2565, 2566
BstSFI CTRYAG 1 cut(s) 969
BstSLI GKGCMC 2 cut(s) 2550, 2755
BstUI CGCG 2 cut(s) 2844, 2867
BstV1I GCAGC 9 cut(s) 73, 325, 1015, 1228, 1261, 1721, 2396, 2482, 2485
BstV2I GAAGAC 3 cut(s) 90, 105, 345
BstX2I RGATCY 3 cut(s) 310, 1541, 1651
BstXI CCANNNNNNTGG 1 cut(s) 2074
BstYI RGATCY 3 cut(s) 310, 1541, 1651
BstZ17I GTATAC 2 cut(s) 426, 1251
Bsu15I ATCGAT 1 cut(s) 2363
BsuI GTATCC 1 cut(s) 203
BsuRI GGCC 4 cut(s) 20, 882, 1233, 2298
BsuTUI ATCGAT 1 cut(s) 2363
BtgI CCRYGG 1 cut(s) 2346
BtgZI GCGATG 1 cut(s) 2882
BtrI CACGTC 1 cut(s) 931
BtsCI GGATG 6 cut(s) 21, 1781, 2518, 2623, 2810, 2947
BtsI GCAGTG 3 cut(s) 1206, 1672, 2052
BtsIMutI CAGTG 6 cut(s) 1206, 1572, 1672, 2052, 2453, 2773
Cac8I GCNNGC 9 cut(s) 280, 514, 1560, 1882, 2185, 2382, 2389, 2751, 2778
CciI TCATGA 1 cut(s) 1486
CfoI GCGC 2 cut(s) 1914, 2293
Cfr10I RCCGGY 3 cut(s) 2631, 2922, 2931
Cfr9I CCCGGG 1 cut(s) 2566
ClaI ATCGAT 1 cut(s) 2363
CseI GACGC 1 cut(s) 2833
Csp6I GTAC 9 cut(s) 180, 250, 1078, 1316, 1739, 1947, 2368, 2758, 2906
CspAI ACCGGT 2 cut(s) 2922, 2931
CviQI GTAC 9 cut(s) 180, 250, 1078, 1316, 1739, 1947, 2368, 2758, 2906
DdeI CTNAG 9 cut(s) 348, 1088, 1186, 1648, 1992, 2194, 2433, 2703, 2909
DinI GGCGCC 1 cut(s) 1913
DraI TTTAAA 2 cut(s) 726, 2029
DraIII CACNNNGTG 1 cut(s) 2554
EaeI YGGCCR 1 cut(s) 2296
Eam1104I CTCTTC 5 cut(s) 706, 900, 1290, 2414, 2733
EarI CTCTTC 5 cut(s) 706, 900, 1290, 2414, 2733
Ecl136II GAGCTC 1 cut(s) 554
Eco130I CCWWGG 2 cut(s) 15, 2346
Eco24I GRGCYC 1 cut(s) 556
Eco32I GATATC 1 cut(s) 1770
Eco53kI GAGCTC 1 cut(s) 554
Eco57I CTGAAG 4 cut(s) 474, 1311, 1526, 2340
Eco88I CYCGRG 1 cut(s) 2566
EcoICRI GAGCTC 1 cut(s) 554
EcoRI GAATTC 1 cut(s) 1153
EcoRII CCWGG 3 cut(s) 320, 411, 2057
EcoRV GATATC 1 cut(s) 1770
EcoT14I CCWWGG 2 cut(s) 15, 2346
EcoT22I ATGCAT 4 cut(s) 1527, 1781, 2017, 2238
EcoT38I GRGCYC 1 cut(s) 556
EgeI GGCGCC 1 cut(s) 1913
EheI GGCGCC 1 cut(s) 1913
ErhI CCWWGG 2 cut(s) 15, 2346
FalI AAGNNNNNCTT 2 cut(s) 375, 407
FaqI GGGAC 1 cut(s) 2417
FauNDI CATATG 1 cut(s) 2223
FbaI TGATCA 1 cut(s) 940
FblI GTMKAC 2 cut(s) 425, 1250
FokI GGATG 6 cut(s) 8, 1788, 2525, 2630, 2797, 2954
FriOI GRGCYC 1 cut(s) 556
FspBI CTAG 4 cut(s) 759, 1107, 2447, 2777
GlaI GCGC 2 cut(s) 1913, 2292
GsuI CTGGAG 1 cut(s) 2096
HaeII RGCGCY 1 cut(s) 1915
HaeIII GGCC 4 cut(s) 20, 882, 1233, 2298
HapII CCGG 7 cut(s) 549, 1167, 2530, 2567, 2632, 2923, 2932
HgaI GACGC 1 cut(s) 2833
HhaI GCGC 2 cut(s) 1914, 2293
Hin1I GRCGYC 1 cut(s) 1912
Hin6I GCGC 2 cut(s) 1912, 2291
HinP1I GCGC 2 cut(s) 1912, 2291
HincII GTYRAC 1 cut(s) 562
HindII GTYRAC 1 cut(s) 562
HindIII AAGCTT 4 cut(s) 384, 1508, 2352, 2435
HinfI GANTC 9 cut(s) 222, 439, 494, 776, 923, 1501, 2336, 2459, 2836
HpaI GTTAAC 1 cut(s) 562
HpaII CCGG 7 cut(s) 549, 1167, 2530, 2567, 2632, 2923, 2932
HphI GGTGA 6 cut(s) 142, 545, 782, 2599, 2921, 2972
Hpy166II GTNNAC 9 cut(s) 182, 426, 562, 752, 1085, 1133, 1251, 1310, 1981
Hpy8I GTNNAC 9 cut(s) 182, 426, 562, 752, 1085, 1133, 1251, 1310, 1981
Hpy99I CGWCG 3 cut(s) 160, 932, 1451
HpyAV CCTTC 6 cut(s) 211, 587, 649, 1286, 2090, 2684
HpyCH4III ACNGT 7 cut(s) 533, 1054, 1082, 1114, 1493, 1567, 2768
HpyCH4IV ACGT 4 cut(s) 190, 417, 930, 1225
HpyF10VI GCNNNNNNNGC 9 cut(s) 344, 1172, 1457, 1466, 1718, 1871, 2063, 2233, 2443
HpyF3I CTNAG 9 cut(s) 348, 1088, 1186, 1648, 1992, 2194, 2433, 2703, 2909
HpySE526I ACGT 4 cut(s) 190, 417, 930, 1225
Hsp92I GRCGYC 1 cut(s) 1912
HspAI GCGC 2 cut(s) 1912, 2291
KasI GGCGCC 1 cut(s) 1911
Ksp22I TGATCA 1 cut(s) 940
KspAI GTTAAC 1 cut(s) 562
LguI GCTCTTC 1 cut(s) 900
LmnI GCTCC 3 cut(s) 551, 2115, 2443
Lsp1109I GCAGC 9 cut(s) 73, 325, 1015, 1228, 1261, 1721, 2396, 2482, 2485
MaeI CTAG 4 cut(s) 759, 1107, 2447, 2777
MaeII ACGT 4 cut(s) 190, 417, 930, 1225
MaeIII GTNAC 6 cut(s) 117, 946, 1221, 2158, 2189, 2858
MflI RGATCY 3 cut(s) 310, 1541, 1651
MhlI GDGCHC 4 cut(s) 556, 2550, 2755, 2804
MluI ACGCGT 1 cut(s) 2842
Mly113I GGCGCC 1 cut(s) 1912
MlyI GAGTC 6 cut(s) 433, 503, 932, 1495, 2345, 2453
MmeI TCCRAC 4 cut(s) 138, 951, 1945, 2558
Mph1103I ATGCAT 4 cut(s) 1527, 1781, 2017, 2238
MslI CAYNNNNRTG 8 cut(s) 245, 507, 717, 1323, 1623, 1838, 1926, 2072
MspA1I CMGCKG 2 cut(s) 974, 1219
MspI CCGG 7 cut(s) 549, 1167, 2530, 2567, 2632, 2923, 2932
MspR9I CCNGG 6 cut(s) 322, 413, 2059, 2530, 2567, 2568
Mva1269I GAATGC 5 cut(s) 148, 365, 469, 1462, 2068
MvaI CCWGG 3 cut(s) 322, 413, 2059
MvnI CGCG 2 cut(s) 2844, 2867
MwoI GCNNNNNNNGC 9 cut(s) 344, 1172, 1457, 1466, 1718, 1871, 2063, 2233, 2443
NarI GGCGCC 1 cut(s) 1912
NciI CCSGG 3 cut(s) 2530, 2567, 2568
NcoI CCATGG 1 cut(s) 2346
NdeI CATATG 1 cut(s) 2223
NheI GCTAGC 1 cut(s) 2776
NlaIV GGNNCC 1 cut(s) 1913
NmeAIII GCCGAG 2 cut(s) 308, 2417
NmuCI GTSAC 5 cut(s) 117, 946, 2158, 2189, 2858
NsiI ATGCAT 4 cut(s) 1527, 1781, 2017, 2238
NspI RCATGY 4 cut(s) 1078, 1322, 1581, 1987
NspV TTCGAA 1 cut(s) 1058
PagI TCATGA 1 cut(s) 1486
PciI ACATGT 4 cut(s) 1074, 1318, 1577, 1983
PciSI GCTCTTC 1 cut(s) 900
PctI GAATGC 5 cut(s) 148, 365, 469, 1462, 2068
PfeI GAWTC 3 cut(s) 222, 776, 2836
PflFI GACNNNGTC 1 cut(s) 442
PfoI TCCNGGA 1 cut(s) 320
PinAI ACCGGT 2 cut(s) 2922, 2931
PleI GAGTC 6 cut(s) 433, 502, 931, 1495, 2344, 2453
PluTI GGCGCC 1 cut(s) 1915
PpsI GAGTC 6 cut(s) 433, 502, 931, 1495, 2344, 2453
Ppu21I YACGTR 1 cut(s) 191
PscI ACATGT 4 cut(s) 1074, 1318, 1577, 1983
Psp124BI GAGCTC 1 cut(s) 556
Psp6I CCWGG 3 cut(s) 320, 411, 2057
PspGI CCWGG 3 cut(s) 320, 411, 2057
PspN4I GGNNCC 1 cut(s) 1913
PsuI RGATCY 3 cut(s) 310, 1541, 1651
PsyI GACNNNGTC 1 cut(s) 442
PvuII CAGCTG 2 cut(s) 974, 1219
RsaI GTAC 9 cut(s) 181, 251, 1079, 1317, 1740, 1948, 2369, 2759, 2907
RsaNI GTAC 9 cut(s) 180, 250, 1078, 1316, 1739, 1947, 2368, 2758, 2906
RseI CAYNNNNRTG 8 cut(s) 245, 507, 717, 1323, 1623, 1838, 1926, 2072
SacI GAGCTC 1 cut(s) 556
SapI GCTCTTC 1 cut(s) 900
SchI GAGTC 6 cut(s) 433, 503, 932, 1495, 2345, 2453
ScrFI CCNGG 6 cut(s) 322, 413, 2059, 2530, 2567, 2568
SduI GDGCHC 4 cut(s) 556, 2550, 2755, 2804
SfcI CTRYAG 1 cut(s) 969
SfoI GGCGCC 1 cut(s) 1913
SfuI TTCGAA 1 cut(s) 1058
SmaI CCCGGG 1 cut(s) 2568
SmiMI CAYNNNNRTG 8 cut(s) 245, 507, 717, 1323, 1623, 1838, 1926, 2072
SmlI CTYRAG 1 cut(s) 1934
SmoI CTYRAG 1 cut(s) 1934
SsiI CCGC 2 cut(s) 911, 1230
SspDI GGCGCC 1 cut(s) 1911
SspI AATATT 1 cut(s) 843
SspMI CTAG 4 cut(s) 759, 1107, 2447, 2777
SstI GAGCTC 1 cut(s) 556
StyD4I CCNGG 6 cut(s) 320, 411, 2057, 2528, 2565, 2566
StyI CCWWGG 2 cut(s) 15, 2346
TaaI ACNGT 7 cut(s) 533, 1054, 1082, 1114, 1493, 1567, 2768
TaiI ACGT 4 cut(s) 193, 420, 933, 1228
TaqI TCGA 9 cut(s) 204, 291, 329, 369, 433, 1058, 2334, 2363, 2583
TatI WGTACW 7 cut(s) 179, 249, 1077, 1315, 2367, 2757, 2905
TauI GCSGC 1 cut(s) 1233
TfiI GAWTC 3 cut(s) 222, 776, 2836
TscAI CASTG 6 cut(s) 1206, 1572, 1672, 2059, 2460, 2773
TseFI GTSAC 5 cut(s) 117, 946, 2158, 2189, 2858
TseI GCWGC 9 cut(s) 86, 338, 1003, 1216, 1274, 1709, 2384, 2495, 2498
Tsp45I GTSAC 5 cut(s) 117, 946, 2158, 2189, 2858
TspGWI ACGGA 2 cut(s) 53, 2813
TspMI CCCGGG 1 cut(s) 2566
TspRI CASTG 6 cut(s) 1206, 1572, 1672, 2059, 2460, 2773
Tth111I GACNNNGTC 1 cut(s) 442
XapI RAATTY 7 cut(s) 539, 762, 1094, 1153, 1853, 1917, 2326
XceI RCATGY 4 cut(s) 1078, 1322, 1581, 1987
XmaI CCCGGG 1 cut(s) 2566
XmiI GTMKAC 2 cut(s) 425, 1250
XspI CTAG 4 cut(s) 759, 1107, 2447, 2777
Zsp2I ATGCAT 4 cut(s) 1527, 1781, 2017, 2238
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.