Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0007813

Physical Location & Seq

Genomic Coordinates Reverse (-)

35468964 .. 35471681

Gene Structure 2718 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G402000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2169 bp

TCTACTCATATCTCACCATCTTCGTCCTCATCTTCTTCCTCTTCTCAATGGTTCTCCGTCATCCGCACCGCAATTACCACCATGGATTTGCAGCTCGGCAAGCGTGTGCATGCGCTTATCATAACCTCCGGCAACGACCCCGATCATTTTTTGACCAACAACCTCATTACCATGTACTCCAAATGCAGGTCGCTTCCATGCGCACGCCGCCTGTTCGATAAAACGCCCGGCCGGGACCTTGTCACCTGGAACTCCATTCTAGCAGCCTATGCGCAAGCAGCGGGCTCTGATGTTGACAATGTTCAAGAGGGTCTTACCCTTTTCCGCAGTCTTCGCGGGTCTGTCGTTTTTACTAGTAGACTCACTTTGGCGCCGGTTTTAAAGCTGTGCTTGCTCTCAGGGAATGTATGGGCTTCGGAGGCTGTTCATGGTTATGCTGTTAAAATCGGATTGGAATGGGATGTGTTTGTTTCTGGTGCACTTATGAATATATATTCCAAACTTGGACGGATTAAAGAGGCTCGTGCATTGTTTGATGGGATGGAGGAAAGGGATGTGGTGTTGTGGAATACAATGCTCAAGGCCTATATGGAGATTGGTCTTGAGAAAGAAGGACTTTCTCTCTTCTCTGCGTTTCACCTGAGTGGATTACGTCCTGATGATGTCAGTGTGCGTTCTGTTCTTATTGCAGGTGTAAGTGGTTTGGAGTTGGGGAAACAGATTCACAGTGCTGCTTTGAGATCAGGGTTTGATTCTGTTGTTTCTGTTGCAAATAGCCTTATCAACGTGTATTCAAAGGCTCGTTCTGTTTATTATGCGAGAAAAGTGTTCAATAACATGAAAGAAGTGGACTTAATTAGTTGGAACTCAATGATATCATGTTGTGTGCAAAGTGGTTTAGGAGAGGAATCGGTGATTTTATTTATAGGCATATTACGTGATGGTCTAAGACCTGATCAATTTACTACTGCAAATGAAATTACTTTGGCGACTGTGGCTAAGGCAACTAGTAGCCTGGTAGCTTTGAATCCAGGGAAGCAAATTCATGCTCATGCCATAAAAACAGGGTTTTCTTCAGATCTCTTTGTTAATAGCGGTATTCTAGATATGTATATTAAATGTGGAGACATGCGAAGTGCACACGGAATTTTCAATGGCATCCCTGCACCTGATGATGTTGCATGGACAACTATGATCTCAGGCTGCGTAGAAAATGGAGATGAAGGGCGCTCTCTTTATATATACCATCAGATGAGGCAGTCGGGAGTTCAGCCTGATGAGTATACCTTTGCTACCCTTGTCAAAGCCAGCTCTTGTCTGACAGCATTGGAACAAGGGAAACAGATACATGCAGATGTCATAAAGTTGGATTGTTCCTTGGACCCTTTTGTTGCGACATCACTTGTTGACATGTATGCTAAGTGTGGTAACATAGAAGATGCGTATTGTTTATTCAGAAGGATGGATGTTAGGAACATTGCCCTGTGGAATGCCATGTTGGTGGGTTTAGCTCAGCATGGAAATGCTGAAGAAGCACTAAATCTTTTCAGAGTCATGAAATCTAAGAACGTTGAGCCTGATAGAGTTACTTTCATTGGAGTCCTTTCGGCATGTAGCCATTCTGGTTTAGTTTCTGAAGCTTATGAGCATTTTTCTTCAATGCAAAAGGATTACGGCGTTGAACCTGAGATTGAGCATTACTCTTGCCTAGTGGATGCCCTTGGCCGTGCAGGGCGTGTTCAAGAGGCAGAAAAGCTGATAGCATCAATGCCCTTTGAAGCTTCTGCTTCAATGTACGGAGCCCTGCTTGGTGCTTGCAGGATTAAAGGGGACACAGAAACCGGAAAACGAGTAGCAGCACAGCTCTTGGCCATGGAGCCATCTGACTCATCCGCCTACGTTCTTTTATCCAACATCTATGCTGCTGCCAACCAGTGGGATGTTGTGAGTGATGCTAGAACAATGATGGAGAGGCAGAAGGTAAAGAAAGAACCAGGTTTCAGCTGGATAAATGTAAAGAACAAGGTACATTTGTTCGTGGTAGACGATAAATCCCATCCACAAGCTGATCAGATACATGACAAGGTGGAGGACTTGATGAAACAGATCGGCGAAGAAGGGTACGTCCCGGATACAGGGTTTGCACTGGTTGATATTGAAGAAGAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

723

Amino Acids

79.16

Weight (kDa)

5.69

Isoelectric Point (pI)

42.95

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007813)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G33170
fragaria_vesca	FvH4_2g30790
malus_domestica	MD08G1046200.v1.1 MD15G1047600.v1.1
prunus_persica	Prupe.1G402000_v2.0.a1
rosa_chinensis	RchiOBHm_Chr6g0312061 RchiOBHm_Chr6g0312101 RchiOBHm_Chr7g0217531
rosa_laevigata	RLG00000010354 RLG00000010356
rosa_multiflora	Rmu_sc0001501.1_g000037
rosa_roxburghii	Rroxscaffold_7G00157070 Rroxscaffold_7G00157080
rosa_rugosa	Rorug06G0392600
rosa_samantha	Rh6AG509100 Rh6AG509400 Rh6BG520400 Rh6BG520500 Rh6CG526300 Rh6CG526400 Rh6DG511800 Rh6DG511900
rosa_wichuraiana	Rw6G044330 Rw6G044340

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	680
Acc16I	TGCGCA	2 cut(s)	202, 273
Acc36I	ACCTGC	2 cut(s)	177, 680
AccB1I	GGYRCC	1 cut(s)	370
AccB7I	CCANNNNNTGG	1 cut(s)	1935
AccI	GTMKAC	3 cut(s)	358, 1283, 2043
AccII	CGCG	1 cut(s)	336
AciI	CCGC	8 cut(s)	64, 69, 208, 281, 325, 336, 1095, 1893
AclI	AACGTT	1 cut(s)	1569
AcoI	YGGCCR	3 cut(s)	229, 1723, 1869
AcsI	RAATTY	2 cut(s)	1041, 1146
AcuI	CTGAAG	3 cut(s)	1059, 1548, 1656
AcyI	GRCGYC	1 cut(s)	371
AfaI	GTAC	4 cut(s)	176, 1796, 2028, 2123
AfiI	CCNNNNNNNGG	3 cut(s)	186, 1935, 2135
AflIII	ACRYGT	2 cut(s)	786, 1410
AhlI	ACTAGT	2 cut(s)	353, 1007
AjnI	CCWGG	4 cut(s)	245, 1014, 1030, 1993
AjuI	GAANNNNNNNTTGG	2 cut(s)	1481, 1513
AleI	CACNNNNGTG	1 cut(s)	642
Alw21I	GWGCWC	2 cut(s)	481, 1141
Alw26I	GTCTC	1 cut(s)	1119
Alw44I	GTGCAC	2 cut(s)	477, 1137
AoxI	GGCC	4 cut(s)	229, 582, 1723, 1869
ApaLI	GTGCAC	2 cut(s)	477, 1137
ApeKI	GCWGC	8 cut(s)	91, 263, 278, 731, 1203, 1856, 1922, 1925
ApoI	RAATTY	2 cut(s)	1041, 1146
AspLEI	GCGC	5 cut(s)	115, 203, 274, 373, 1230
AspS9I	GGNCC	2 cut(s)	235, 1381
AsuC2I	CCSGG	3 cut(s)	228, 233, 2129
AsuHPI	GGTGA	4 cut(s)	6, 235, 629, 925
AvaII	GGWCC	2 cut(s)	235, 1381
BaeGI	GKGCMC	2 cut(s)	481, 1141
BaeI	ACNNNNGTAYC	2 cut(s)	2018, 2051
BalI	TGGCCA	1 cut(s)	1871
BanI	GGYRCC	1 cut(s)	370
BanII	GRGCYC	2 cut(s)	287, 1804
BauI	CACGAG	1 cut(s)	522
BbsI	GAAGAC	1 cut(s)	323
Bbv12I	GWGCWC	2 cut(s)	481, 1141
BbvI	GCAGC	8 cut(s)	103, 275, 290, 718, 1190, 1868, 1909, 1912
BccI	CCATC	9 cut(s)	25, 530, 535, 935, 1254, 1456, 1888, 1960, 2064
BceAI	ACGGC	2 cut(s)	1690, 1710
BciT130I	CCWGG	4 cut(s)	247, 1016, 1032, 1995
BciVI	GTATCC	1 cut(s)	2125
BclI	TGATCA	2 cut(s)	955, 2068
BcnI	CCSGG	3 cut(s)	228, 233, 2129
BcoDI	GTCTC	1 cut(s)	1119
BcuI	ACTAGT	2 cut(s)	353, 1007
BfaI	CTAG	6 cut(s)	260, 354, 1008, 1103, 1709, 1956
BfoI	RGCGCY	2 cut(s)	374, 1231
BfuAI	ACCTGC	2 cut(s)	177, 680
BfuI	GTATCC	1 cut(s)	2125
BglII	AGATCT	1 cut(s)	1078
BisI	GCNGC	9 cut(s)	92, 208, 264, 279, 732, 1204, 1857, 1923, 1926
BlpI	GCTNAGC	1 cut(s)	1512
BlsI	GCNGC	9 cut(s)	93, 209, 265, 280, 733, 1205, 1858, 1924, 1927
Bme1390I	CCNGG	7 cut(s)	228, 233, 247, 1016, 1032, 1995, 2129
Bme18I	GGWCC	2 cut(s)	235, 1381
BmgT120I	GGNCC	2 cut(s)	235, 1381
BmiI	GGNNCC	5 cut(s)	236, 372, 1383, 1801, 1878
BmrFI	CCNGG	7 cut(s)	228, 233, 247, 1016, 1032, 1995, 2129
BmsI	GCATC	5 cut(s)	1167, 1429, 1705, 1772, 1942
BpiI	GAAGAC	1 cut(s)	323
BplI	GAGNNNNNCTC	2 cut(s)	1685, 1717
Bpu10I	CCTNAGC	1 cut(s)	999
Bpu1102I	GCTNAGC	1 cut(s)	1512
BpuEI	CTTGAG	2 cut(s)	563, 623
BpuMI	CCSGG	3 cut(s)	228, 233, 2129
BsaAI	YACGTR	1 cut(s)	938
BsaHI	GRCGYC	1 cut(s)	371
BsaJI	CCNNGG	5 cut(s)	81, 1031, 1377, 1720, 1872
BsaWI	WCCGGW	1 cut(s)	1841
Bsc4I	CCNNNNNNNGG	3 cut(s)	186, 1935, 2135
Bse118I	RCCGGY	1 cut(s)	373
Bse1I	ACTGG	2 cut(s)	1933, 2151
Bse3DI	GCAATG	1 cut(s)	1476
BseBI	CCWGG	4 cut(s)	247, 1016, 1032, 1995
BseDI	CCNNGG	5 cut(s)	81, 1031, 1377, 1720, 1872
BseLI	CCNNNNNNNGG	3 cut(s)	186, 1935, 2135
BseMI	GCAATG	1 cut(s)	1476
BseMII	CTCAG	5 cut(s)	411, 632, 1212, 1526, 1677
BseNI	ACTGG	2 cut(s)	1933, 2151
BseSI	GKGCMC	2 cut(s)	481, 1141
BseX3I	CGGCCG	1 cut(s)	229
BseXI	GCAGC	8 cut(s)	103, 275, 290, 718, 1190, 1868, 1909, 1912
BsgI	GTGCAG	2 cut(s)	1149, 1749
Bsh1236I	CGCG	1 cut(s)	336
Bsh1285I	CGRYCG	1 cut(s)	232
BshFI	GGCC	4 cut(s)	231, 584, 1725, 1871
BshNI	GGYRCC	1 cut(s)	370
BsiEI	CGRYCG	1 cut(s)	232
BsiHKAI	GWGCWC	2 cut(s)	481, 1141
BsiSI	CCGG	6 cut(s)	129, 228, 232, 374, 1842, 2129
BslFI	GGGAC	3 cut(s)	248, 1844, 2111
BslI	CCNNNNNNNGG	3 cut(s)	186, 1935, 2135
BsmAI	GTCTC	1 cut(s)	1119
BsmFI	GGGAC	3 cut(s)	248, 1844, 2111
BsmI	GAATGC	1 cut(s)	1495
BsnI	GGCC	4 cut(s)	231, 584, 1725, 1871
Bsp1286I	GDGCHC	4 cut(s)	287, 481, 1141, 1804
Bsp143I	GATC	7 cut(s)	142, 740, 955, 1078, 1194, 2068, 2106
Bsp1720I	GCTNAGC	1 cut(s)	1512
Bsp19I	CCATGG	2 cut(s)	81, 1872
BspACI	CCGC	8 cut(s)	64, 69, 208, 281, 325, 336, 1095, 1893
BspANI	GGCC	4 cut(s)	231, 584, 1725, 1871
BspCNI	CTCAG	5 cut(s)	410, 633, 1211, 1525, 1678
BspFNI	CGCG	1 cut(s)	336
BspHI	TCATGA	1 cut(s)	1554
BspLI	GGNNCC	5 cut(s)	236, 372, 1383, 1801, 1878
BspMI	ACCTGC	2 cut(s)	177, 680
BspT107I	GGYRCC	1 cut(s)	370
BsrDI	GCAATG	1 cut(s)	1476
BsrFI	RCCGGY	1 cut(s)	373
BsrI	ACTGG	2 cut(s)	1933, 2151
BssAI	RCCGGY	1 cut(s)	373
BssECI	CCNNGG	5 cut(s)	81, 1031, 1377, 1720, 1872
BssMI	GATC	7 cut(s)	142, 740, 955, 1078, 1194, 2068, 2106
BssNAI	GTATAC	1 cut(s)	1284
BssNI	GRCGYC	1 cut(s)	371
BssSI	CACGAG	1 cut(s)	522
BssT1I	CCWWGG	4 cut(s)	81, 1377, 1720, 1872
Bst1107I	GTATAC	1 cut(s)	1284
Bst2BI	CACGAG	1 cut(s)	522
Bst2UI	CCWGG	4 cut(s)	247, 1016, 1032, 1995
Bst4CI	ACNGT	2 cut(s)	728, 994
Bst6I	CTCTTC	3 cut(s)	46, 629, 2157
BstACI	GRCGYC	1 cut(s)	371
BstAPI	GCANNNNNTGC	1 cut(s)	269
BstBAI	YACGTR	1 cut(s)	938
BstC8I	GCNNGC	8 cut(s)	101, 111, 205, 276, 283, 392, 1309, 1816
BstDEI	CTNAG	9 cut(s)	397, 641, 947, 999, 1198, 1419, 1512, 1563, 1686
BstDSI	CCRYGG	2 cut(s)	81, 1872
BstFNI	CGCG	1 cut(s)	336
BstH2I	RGCGCY	2 cut(s)	374, 1231
BstHHI	GCGC	5 cut(s)	115, 203, 274, 373, 1230
BstKTI	GATC	7 cut(s)	145, 743, 958, 1081, 1197, 2071, 2109
BstMAI	GTCTC	1 cut(s)	1119
BstMBI	GATC	7 cut(s)	142, 740, 955, 1078, 1194, 2068, 2106
BstMCI	CGRYCG	1 cut(s)	232
BstMWI	GCNNNNNNNGC	9 cut(s)	100, 207, 269, 278, 333, 391, 419, 995, 1532
BstNI	CCWGG	4 cut(s)	247, 1016, 1032, 1995
BstNSI	RCATGY	5 cut(s)	113, 1132, 1352, 1414, 1614
BstSCI	CCNGG	7 cut(s)	226, 231, 245, 1014, 1030, 1993, 2127
BstSLI	GKGCMC	2 cut(s)	481, 1141
BstUI	CGCG	1 cut(s)	336
BstV1I	GCAGC	8 cut(s)	103, 275, 290, 718, 1190, 1868, 1909, 1912
BstV2I	GAAGAC	1 cut(s)	323
BstX2I	RGATCY	1 cut(s)	1078
BstXI	CCANNNNNNTGG	1 cut(s)	1501
BstYI	RGATCY	1 cut(s)	1078
BstZ17I	GTATAC	1 cut(s)	1284
BstZI	CGGCCG	1 cut(s)	229
BsuI	GTATCC	1 cut(s)	2125
BsuRI	GGCC	4 cut(s)	231, 584, 1725, 1871
BtgI	CCRYGG	2 cut(s)	81, 1872
BtsIMutI	CAGTG	4 cut(s)	673, 733, 1940, 2144
BveI	ACCTGC	2 cut(s)	177, 680
Cac8I	GCNNGC	8 cut(s)	101, 111, 205, 276, 283, 392, 1309, 1816
CciI	TCATGA	1 cut(s)	1554
CfoI	GCGC	5 cut(s)	115, 203, 274, 373, 1230
Cfr10I	RCCGGY	1 cut(s)	373
Cfr13I	GGNCC	2 cut(s)	235, 1381
CsiI	ACCWGGT	1 cut(s)	1993
Csp6I	GTAC	4 cut(s)	175, 1795, 2027, 2122
CviQI	GTAC	4 cut(s)	175, 1795, 2027, 2122
DdeI	CTNAG	9 cut(s)	397, 641, 947, 999, 1198, 1419, 1512, 1563, 1686
DinI	GGCGCC	1 cut(s)	372
DpnI	GATC	7 cut(s)	144, 742, 957, 1080, 1196, 2070, 2108
DpnII	GATC	7 cut(s)	142, 740, 955, 1078, 1194, 2068, 2106
DraI	TTTAAA	1 cut(s)	381
EaeI	YGGCCR	3 cut(s)	229, 1723, 1869
EagI	CGGCCG	1 cut(s)	229
Eam1104I	CTCTTC	3 cut(s)	46, 629, 2157
EarI	CTCTTC	3 cut(s)	46, 629, 2157
EciI	GGCGGA	1 cut(s)	1882
EclXI	CGGCCG	1 cut(s)	229
Eco130I	CCWWGG	4 cut(s)	81, 1377, 1720, 1872
Eco147I	AGGCCT	1 cut(s)	584
Eco24I	GRGCYC	2 cut(s)	287, 1804
Eco32I	GATATC	1 cut(s)	876
Eco47I	GGWCC	2 cut(s)	235, 1381
Eco52I	CGGCCG	1 cut(s)	229
Eco57I	CTGAAG	3 cut(s)	1059, 1548, 1656
EcoO109I	RGGNCCY	1 cut(s)	235
EcoRII	CCWGG	4 cut(s)	245, 1014, 1030, 1993
EcoRV	GATATC	1 cut(s)	876
EcoT14I	CCWWGG	4 cut(s)	81, 1377, 1720, 1872
EcoT38I	GRGCYC	2 cut(s)	287, 1804
EgeI	GGCGCC	1 cut(s)	372
EheI	GGCGCC	1 cut(s)	372
ErhI	CCWWGG	4 cut(s)	81, 1377, 1720, 1872
FalI	AAGNNNNNCTT	6 cut(s)	297, 329, 374, 406, 600, 632
FaqI	GGGAC	3 cut(s)	248, 1844, 2111
FauI	CCCGC	2 cut(s)	274, 329
FbaI	TGATCA	2 cut(s)	955, 2068
FblI	GTMKAC	3 cut(s)	358, 1283, 2043
Fnu4HI	GCNGC	9 cut(s)	92, 208, 264, 279, 732, 1204, 1857, 1923, 1926
FriOI	GRGCYC	2 cut(s)	287, 1804
Fsp4HI	GCNGC	9 cut(s)	92, 208, 264, 279, 732, 1204, 1857, 1923, 1926
FspAI	RTGCGCAY	1 cut(s)	202
FspBI	CTAG	6 cut(s)	260, 354, 1008, 1103, 1709, 1956
FspI	TGCGCA	2 cut(s)	202, 273
GlaI	GCGC	5 cut(s)	114, 202, 273, 372, 1229
GluI	GCNGC	9 cut(s)	92, 208, 264, 279, 732, 1204, 1857, 1923, 1926
HaeII	RGCGCY	2 cut(s)	374, 1231
HaeIII	GGCC	4 cut(s)	231, 584, 1725, 1871
HapII	CCGG	6 cut(s)	129, 228, 232, 374, 1842, 2129
HhaI	GCGC	5 cut(s)	115, 203, 274, 373, 1230
Hin1I	GRCGYC	1 cut(s)	371
Hin6I	GCGC	5 cut(s)	113, 201, 272, 371, 1228
HinP1I	GCGC	5 cut(s)	113, 201, 272, 371, 1228
HincII	GTYRAC	2 cut(s)	295, 1408
HindII	GTYRAC	2 cut(s)	295, 1408
HindIII	AAGCTT	2 cut(s)	1638, 1779
HinfI	GANTC	8 cut(s)	360, 721, 752, 908, 1027, 1551, 1599, 1886
HpaII	CCGG	6 cut(s)	129, 228, 232, 374, 1842, 2129
HphI	GGTGA	4 cut(s)	6, 235, 629, 925
Hpy166II	GTNNAC	8 cut(s)	295, 359, 479, 850, 1139, 1284, 1408, 2044
Hpy188III	TCNNGA	7 cut(s)	305, 602, 656, 1103, 1263, 1555, 1742
Hpy8I	GTNNAC	8 cut(s)	295, 359, 479, 850, 1139, 1284, 1408, 2044
HpyAV	CCTTC	5 cut(s)	605, 1217, 1452, 1972, 2111
HpyCH4III	ACNGT	2 cut(s)	728, 994
HpyCH4IV	ACGT	6 cut(s)	652, 786, 937, 1569, 1899, 2124
HpyF10VI	GCNNNNNNNGC	9 cut(s)	100, 207, 269, 278, 333, 391, 419, 995, 1532
HpyF3I	CTNAG	9 cut(s)	397, 641, 947, 999, 1198, 1419, 1512, 1563, 1686
HpySE526I	ACGT	6 cut(s)	652, 786, 937, 1569, 1899, 2124
Hsp92I	GRCGYC	1 cut(s)	371
HspAI	GCGC	5 cut(s)	113, 201, 272, 371, 1228
KasI	GGCGCC	1 cut(s)	370
Ksp22I	TGATCA	2 cut(s)	955, 2068
Kzo9I	GATC	7 cut(s)	142, 740, 955, 1078, 1194, 2068, 2106
LmnI	GCTCC	2 cut(s)	1799, 1876
Lsp1109I	GCAGC	8 cut(s)	103, 275, 290, 718, 1190, 1868, 1909, 1912
LweI	GCATC	5 cut(s)	1167, 1429, 1705, 1772, 1942
MabI	ACCWGGT	1 cut(s)	1993
MaeI	CTAG	6 cut(s)	260, 354, 1008, 1103, 1709, 1956
MaeII	ACGT	6 cut(s)	652, 786, 937, 1569, 1899, 2124
MaeIII	GTNAC	3 cut(s)	241, 1427, 1585
MalI	GATC	7 cut(s)	144, 742, 957, 1080, 1196, 2070, 2108
MboI	GATC	7 cut(s)	142, 740, 955, 1078, 1194, 2068, 2106
MflI	RGATCY	1 cut(s)	1078
MhlI	GDGCHC	4 cut(s)	287, 481, 1141, 1804
MlsI	TGGCCA	1 cut(s)	1871
MluCI	AATT	6 cut(s)	72, 855, 959, 978, 1041, 1146
MluNI	TGGCCA	1 cut(s)	1871
Mly113I	GGCGCC	1 cut(s)	371
MlyI	GAGTC	4 cut(s)	354, 1560, 1608, 1880
MmeI	TCCRAC	3 cut(s)	842, 1347, 1935
Mox20I	TGGCCA	1 cut(s)	1871
MscI	TGGCCA	1 cut(s)	1871
MseI	TTAA	7 cut(s)	380, 441, 513, 854, 1089, 1116, 1824
MslI	CAYNNNNRTG	7 cut(s)	170, 432, 642, 1050, 1353, 1499, 1521
Msp20I	TGGCCA	1 cut(s)	1871
MspA1I	CMGCKG	2 cut(s)	281, 2004
MspI	CCGG	6 cut(s)	129, 228, 232, 374, 1842, 2129
MspR9I	CCNGG	7 cut(s)	228, 233, 247, 1016, 1032, 1995, 2129
Mva1269I	GAATGC	1 cut(s)	1495
MvaI	CCWGG	4 cut(s)	247, 1016, 1032, 1995
MvnI	CGCG	1 cut(s)	336
MwoI	GCNNNNNNNGC	9 cut(s)	100, 207, 269, 278, 333, 391, 419, 995, 1532
NarI	GGCGCC	1 cut(s)	371
NciI	CCSGG	3 cut(s)	228, 233, 2129
NcoI	CCATGG	2 cut(s)	81, 1872
NdeII	GATC	7 cut(s)	142, 740, 955, 1078, 1194, 2068, 2106
NlaIV	GGNNCC	5 cut(s)	236, 372, 1383, 1801, 1878
NmeAIII	GCCGAG	1 cut(s)	75
NmuCI	GTSAC	1 cut(s)	241
NsbI	TGCGCA	2 cut(s)	202, 273
NspI	RCATGY	5 cut(s)	113, 1132, 1352, 1414, 1614
OliI	CACNNNNGTG	1 cut(s)	642
PaeI	GCATGC	1 cut(s)	113
PagI	TCATGA	1 cut(s)	1554
PaqCI	CACCTGC	1 cut(s)	680
PceI	AGGCCT	1 cut(s)	584
PciI	ACATGT	1 cut(s)	1410
PcsI	WCGNNNNNNNCGW	1 cut(s)	2043
PctI	GAATGC	1 cut(s)	1495
PfeI	GAWTC	4 cut(s)	721, 752, 908, 1027
PflFI	GACNNNGTC	1 cut(s)	239
PflMI	CCANNNNNTGG	1 cut(s)	1935
PfoI	TCCNGGA	1 cut(s)	2127
PkrI	GCNGC	9 cut(s)	93, 209, 265, 280, 733, 1205, 1858, 1924, 1927
PleI	GAGTC	4 cut(s)	354, 1559, 1607, 1880
PluTI	GGCGCC	1 cut(s)	374
PpsI	GAGTC	4 cut(s)	354, 1559, 1607, 1880
Ppu21I	YACGTR	1 cut(s)	938
PpuMI	RGGWCCY	1 cut(s)	235
PscI	ACATGT	1 cut(s)	1410
Psp1406I	AACGTT	1 cut(s)	1569
Psp5II	RGGWCCY	1 cut(s)	235
Psp6I	CCWGG	4 cut(s)	245, 1014, 1030, 1993
PspGI	CCWGG	4 cut(s)	245, 1014, 1030, 1993
PspN4I	GGNNCC	5 cut(s)	236, 372, 1383, 1801, 1878
PspPI	GGNCC	2 cut(s)	235, 1381
PspPPI	RGGWCCY	1 cut(s)	235
PsuI	RGATCY	1 cut(s)	1078
PsyI	GACNNNGTC	1 cut(s)	239
PvuII	CAGCTG	1 cut(s)	2004
RsaI	GTAC	4 cut(s)	176, 1796, 2028, 2123
RsaNI	GTAC	4 cut(s)	175, 1795, 2027, 2122
RseI	CAYNNNNRTG	7 cut(s)	170, 432, 642, 1050, 1353, 1499, 1521
SaqAI	TTAA	7 cut(s)	380, 441, 513, 854, 1089, 1116, 1824
SatI	GCNGC	9 cut(s)	92, 208, 264, 279, 732, 1204, 1857, 1923, 1926
Sau3AI	GATC	7 cut(s)	142, 740, 955, 1078, 1194, 2068, 2106
Sau96I	GGNCC	2 cut(s)	235, 1381
SchI	GAGTC	4 cut(s)	354, 1560, 1608, 1880
ScrFI	CCNGG	7 cut(s)	228, 233, 247, 1016, 1032, 1995, 2129
SduI	GDGCHC	4 cut(s)	287, 481, 1141, 1804
SexAI	ACCWGGT	1 cut(s)	1993
SfaNI	GCATC	5 cut(s)	1167, 1429, 1705, 1772, 1942
SfoI	GGCGCC	1 cut(s)	372
SinI	GGWCC	2 cut(s)	235, 1381
SmiMI	CAYNNNNRTG	7 cut(s)	170, 432, 642, 1050, 1353, 1499, 1521
SmlI	CTYRAG	2 cut(s)	578, 602
SmoI	CTYRAG	2 cut(s)	578, 602
SpeI	ACTAGT	2 cut(s)	353, 1007
SphI	GCATGC	1 cut(s)	113
Sse9I	AATT	6 cut(s)	72, 855, 959, 978, 1041, 1146
SseBI	AGGCCT	1 cut(s)	584
SsiI	CCGC	8 cut(s)	64, 69, 208, 281, 325, 336, 1095, 1893
SspDI	GGCGCC	1 cut(s)	370
SspMI	CTAG	6 cut(s)	260, 354, 1008, 1103, 1709, 1956
StuI	AGGCCT	1 cut(s)	584
StyD4I	CCNGG	7 cut(s)	226, 231, 245, 1014, 1030, 1993, 2127
StyI	CCWWGG	4 cut(s)	81, 1377, 1720, 1872
TaaI	ACNGT	2 cut(s)	728, 994
TaiI	ACGT	6 cut(s)	655, 789, 940, 1572, 1902, 2127
TaqI	TCGA	1 cut(s)	216
TasI	AATT	6 cut(s)	72, 855, 959, 978, 1041, 1146
TatI	WGTACW	1 cut(s)	174
TauI	GCSGC	1 cut(s)	210
TfiI	GAWTC	4 cut(s)	721, 752, 908, 1027
Tru1I	TTAA	7 cut(s)	380, 441, 513, 854, 1089, 1116, 1824
Tru9I	TTAA	7 cut(s)	380, 441, 513, 854, 1089, 1116, 1824
TscAI	CASTG	4 cut(s)	673, 733, 1940, 2151
TseFI	GTSAC	1 cut(s)	241
TseI	GCWGC	8 cut(s)	91, 263, 278, 731, 1203, 1856, 1922, 1925
Tsp45I	GTSAC	1 cut(s)	241
TspDTI	ATGAA	9 cut(s)	416, 500, 854, 990, 1034, 1236, 1571, 1582, 2114
TspGWI	ACGGA	4 cut(s)	46, 523, 1158, 1812
TspRI	CASTG	4 cut(s)	673, 733, 1940, 2151
Tth111I	GACNNNGTC	1 cut(s)	239
Van91I	CCANNNNNTGG	1 cut(s)	1935
VneI	GTGCAC	2 cut(s)	477, 1137
VpaK11BI	GGWCC	2 cut(s)	235, 1381
XapI	RAATTY	2 cut(s)	1041, 1146
XbaI	TCTAGA	1 cut(s)	1102
XceI	RCATGY	5 cut(s)	113, 1132, 1352, 1414, 1614
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2001
XmiI	GTMKAC	3 cut(s)	358, 1283, 2043
XspI	CTAG	6 cut(s)	260, 354, 1008, 1103, 1709, 1956

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.