Rh6BG520500

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
OG0007813
Physical Location & Seq
Forward (+)
71398055 .. 71403389
5335 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG520500.1

Sequence Viewer

Length: 2697 bp
ATGTATTACTATGTTTTTTGTTTATATAAAGGCTTGCTCTTTACATGTCCATTATTGATACCAAACATACTGCTAGAATTTATGGATCAGGTGTCTCATCCACAATGGACTGTGAAGATCAAATATCAGAACTCGAAAGCATTTTGGATTCCCAGGTCGCTCACATATGCACGCCATCTGTTCGATAAAAGTCCTGACCAAGACCTGGTCACCTGGAATGCCATTCTAGCAGCCTATGCGCAAGCTGGGGGCTCTGTGGTTGAGAATGTTCAAGAGGGACTTGGCCTTTTCCAGCGGCTTCGTGAGTCTGTTGTGTTCACCAGTCGGCACACTTTGGCTTCCGTTTTGAAGCTGTGTTTGCTGTCAGGGCGTGTTTGGATTTCGGAGGCTGTTCAGGGTTACGCTGTGAAAATTGGGTTGGAGTGGGATGTGTTTGTTTCGGGTACCCTGGTGAATGTGTATTGTAAATTCAGAAGAGTTAAGGAGGCTCGGGCTTTGTTTGATGGGATGCTGGAACGGGATGTTGTGTTGTGGAACACAATGCTGAAGGCATATGTGGAAATGGGTCTTCAGGAAGAAGCACTCGCTCTTTTCTCTAAGTTTCATCGAAGTGGATTAGGTCCTGATGATGTCAGTGTGCGTTGTGTTCTTAGTGGGATTCACAAAGTTGATTATGTTGAAGGTAAGAGGCACATGGAGGAGGTTCAAGCATATGCAGCAAAGCTGGGGGAGTTTATAACTAATGTAGATGATGATGCCCATCCAACGAGTTTGTGTGATCCGACTACTAATTCCGACATATTTTTGTGGAACAAGAAGTTGTCTAAGTATATCCGAGCTGGTGAAAATTGGGCTGCAATAGTTTGCTTTAGAAATATGATTATATCGAAAGTTGGATATGACAGTGTGACATTAGTTATCATTCTATCTGCGACTGTAGGCACAAATAATTTGGAGGTGGGGAAACAGATTCATGGTGCTGCTTTGAAATCAGATTTTGATTCTGTTCTTTTGGTAGCAAATAGCCTTATCAACATGTATTCAAAGGCTCGCTGTGTTCACTTTGCGAGAGAAGTATTCAATCACATGAAAGAAGTGGACCTGGTTTCATGGAACTCGATGATATCATGTTGTGTGCAAAGCAGTTCAGGAGAGGAATCAGTAAACCTTTTTATTGGTTTATTACGGGATGGTCTAAGACCTGATCAATTTACAATTGCAAGTATTTTAAGGGCTTGCTCCTCTCTTCAAGAAGGGTTGCATCTCAGTAAACAGGTTCATGTTCATGCAATAAAAACTGGTATTGCTGCTGACAGATTTGTTTCAACAGCTCTTATTGATGTTTATTCCAGAAGTGGAAAGATGGAGGAAGCAGAGCCCCTTTTAGAAAACAAAGTTAAATTTGATCTGGCATCTTGGAATGCGTTGATGTTTGGGTACATAAAGAGTAATGACGGTCACGAAGCACTACAACTTATGAGGATGATTCATGAAGGTGGAAAGAGGGGAGACGAGATTACTTTGGCAACTGTTGCTAAGGCCACTAGTTGCCTGGTAGCGTTGGTACCGGGGAAGCAAATTCATGCTCATGTCATAAAAACAGGGTATTCAAAGGACTTATATGTTAACAGCAGTATTCTAGATATGTACATAAAATGTGGAGACATGGGAAGTGTGCACACAGTTTTCAATGACATTCCTGCACCTGATGATGTTGCGTGGACAACTCTAATCTCAGGATGTCTAGAAAATGGAGATGAAGGGCGCTCTGTGTCTATATACCAGCAGATGAAGCAGTCAGGAGTTCATCCCGATGAATATACCTTAGCTACCCTCGCCAAAGCCGCCTCTTGTCTGACAGCATTGGAACAAGGGAAGCAGATACATGCAGATGCAATAAAGTTGGAATATTCCTCAGACCCTTATGTTGCGACATCACTTGTTGACATGTATGCCAAGTGCGGTAATATAGAAGATGCATATCGTTTATTTAGAAGGATGGATGTCGGGAGCATTGTCCTGTGGAATGCCATGTTGGTGGGCTTTGCTCAACATGGAGATGCTGAAGAAGCCCTAAATCTTTTCAGAGTCATGAAATCTAATAACATTGTGCCTGATAGAGTTACTTTCATTGGAGTTCTTTCTGCTTGCAGCCACTCTGGTTTAGTTTCTGAAGCTTATGAGCATTTTTCTTCAATGCAAAGAGATTACGGCATTGAACCTGAGATCAAGCACTACTCTTGTCTAGTCAATGCCCTTAGCCGCGCAGGGCGTGTTCAAGAGGCAGAAAAGCTGATAGCATCAATGCCATTTGAAGCTTCTGCTTCAATGTACAGAGCCCTGCTTGGTGCTTGCAGGGTTCAAGGGGACACAGAAACAGGAAAACGAGTAGCAGAACAGCTCTTGGCTATTGAGCCAACTGACTCATTGGCTTATGTTCTCATATCCAATATGGATGCTGCTGCCAACCAGTGGGATGCTGTGAAAGATGCTCGACGAATGATGAAACAGAAGAATGTAAAGAAAGAACCAGGTTTCAGTTGGATAGATGTGAAGAACAAGGTCCATTTGTTTCTGGTAGATGATAAATCCCATCCTGAGGCCGATTTGATATACGACAAGCTGGAGGACTTGATGAAATGGATCGGCGAAGAAGGGTATGTCCCTGATACAGAGTTTGTGCTTGCTGATGTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0097159 GO:1901363
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1771 PAM2 PPR PPR_2 Smr

Protein Analysis

898

Amino Acids

100.14

Weight (kDa)

5.88

Isoelectric Point (pI)

36.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 173 - 220 3e-07 PPR repeat family
PPR_2 PF13041 569 - 614 1.2e-08 PPR repeat family
PPR_2 PF13041 671 - 718 2.2e-10 PPR repeat family
PPR PF01535 673 - 703 1.4e-06 PPR repeat
TPR_24 PF23276 676 - 765 6.9e-06 Fungal tetratrico peptide repeats
E_motif PF20431 790 - 850 3.1e-14 E motif
Eplus_motif PF20430 855 - 880 3.4e-08 E+ motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 737
Acc16I TGCGCA 1 cut(s) 240
Acc65I GGTACC 2 cut(s) 443, 1564
AccB1I GGYRCC 2 cut(s) 443, 1564
AccB7I CCANNNNNTGG 2 cut(s) 205, 2472
AccII CGCG 1 cut(s) 2265
AciI CCGC 4 cut(s) 295, 1845, 1962, 2263
AclWI GGATC 3 cut(s) 93, 773, 2651
AcsI RAATTY 4 cut(s) 77, 467, 1400, 1578
AcuI CTGAAG 4 cut(s) 554, 566, 2085, 2193
AfaI GTAC 5 cut(s) 445, 1439, 1566, 1649, 2333
AfiI CCNNNNNNNGG 3 cut(s) 205, 2472, 2599
AflIII ACRYGT 3 cut(s) 44, 1035, 1947
AhlI ACTAGT 1 cut(s) 1544
AjnI CCWGG 7 cut(s) 152, 204, 212, 447, 1101, 1551, 2530
AjuI GAANNNNNNNTTGG 4 cut(s) 401, 433, 2018, 2050
Alw21I GWGCWC 1 cut(s) 1680
Alw26I GTCTC 3 cut(s) 99, 1503, 1656
Alw44I GTGCAC 1 cut(s) 1676
AlwI GGATC 3 cut(s) 93, 773, 2651
Ama87I CYCGRG 1 cut(s) 489
AoxI GGCC 3 cut(s) 283, 1539, 2601
ApaLI GTGCAC 1 cut(s) 1676
ApeKI GCWGC 8 cut(s) 230, 716, 854, 980, 1307, 2151, 2459, 2462
ApoI RAATTY 4 cut(s) 77, 467, 1400, 1578
Asp718I GGTACC 2 cut(s) 443, 1564
AspLEI GCGC 3 cut(s) 241, 1767, 2267
AspS9I GGNCC 3 cut(s) 620, 1099, 2563
AsuC2I CCSGG 1 cut(s) 1569
AsuHPI GGTGA 4 cut(s) 202, 310, 463, 854
AvaI CYCGRG 1 cut(s) 489
AvaII GGWCC 3 cut(s) 620, 1099, 2563
AxyI CCTNAGG 1 cut(s) 2598
BaeGI GKGCMC 1 cut(s) 1680
BaeI ACNNNNGTAYC 2 cut(s) 435, 468
BanI GGYRCC 2 cut(s) 443, 1564
BanII GRGCYC 3 cut(s) 254, 1380, 2341
BbsI GAAGAC 1 cut(s) 560
Bbv12I GWGCWC 1 cut(s) 1680
BbvI GCAGC 8 cut(s) 242, 728, 841, 967, 1294, 2163, 2446, 2449
BccI CCATC 7 cut(s) 183, 497, 768, 1184, 1357, 1993, 2601
BceAI ACGGC 1 cut(s) 2227
BciT130I CCWGG 7 cut(s) 154, 206, 214, 449, 1103, 1553, 2532
BclI TGATCA 1 cut(s) 1204
BcnI CCSGG 1 cut(s) 1569
BcoDI GTCTC 3 cut(s) 99, 1503, 1656
BcuI ACTAGT 1 cut(s) 1544
BfaI CTAG 6 cut(s) 74, 227, 1545, 1640, 1745, 2246
BfmI CTRYAG 1 cut(s) 936
BfoI RGCGCY 1 cut(s) 1768
Bme1390I CCNGG 8 cut(s) 154, 206, 214, 449, 1103, 1553, 1569, 2532
Bme18I GGWCC 3 cut(s) 620, 1099, 2563
BmeT110I CYCGRG 1 cut(s) 489
BmgT120I GGNCC 3 cut(s) 620, 1099, 2563
BmiI GGNNCC 2 cut(s) 445, 1566
BmrFI CCNGG 8 cut(s) 154, 206, 214, 449, 1103, 1553, 1569, 2532
BpiI GAAGAC 1 cut(s) 560
BpmI CTGGAG 1 cut(s) 2645
Bpu10I CCTNAGC 3 cut(s) 1536, 1825, 2258
BpuMI CCSGG 1 cut(s) 1569
BsaBI GATNNNNATC 2 cut(s) 759, 1980
BsaJI CCNNGG 3 cut(s) 152, 447, 1568
Bsc4I CCNNNNNNNGG 3 cut(s) 205, 2472, 2599
Bse1I ACTGG 3 cut(s) 321, 1303, 2470
Bse21I CCTNAGG 1 cut(s) 2598
Bse8I GATNNNNATC 2 cut(s) 759, 1980
BseBI CCWGG 7 cut(s) 154, 206, 214, 449, 1103, 1553, 2532
BseDI CCNNGG 3 cut(s) 152, 447, 1568
BseJI GATNNNNATC 2 cut(s) 759, 1980
BseLI CCNNNNNNNGG 3 cut(s) 205, 2472, 2599
BseMII CTCAG 5 cut(s) 1279, 1749, 1929, 2214, 2589
BseNI ACTGG 3 cut(s) 321, 1303, 2470
BseRI GAGGAG 2 cut(s) 713, 1231
BseSI GKGCMC 1 cut(s) 1680
BseXI GCAGC 8 cut(s) 242, 728, 841, 967, 1294, 2163, 2446, 2449
BseYI CCCAGC 2 cut(s) 245, 724
BsgI GTGCAG 1 cut(s) 1686
Bsh1236I CGCG 1 cut(s) 2265
BshFI GGCC 3 cut(s) 285, 1541, 2603
BshNI GGYRCC 2 cut(s) 443, 1564
BsiHKAI GWGCWC 1 cut(s) 1680
BsiHKCI CYCGRG 1 cut(s) 489
BsiSI CCGG 1 cut(s) 1568
BslFI GGGAC 3 cut(s) 291, 2381, 2648
BslI CCNNNNNNNGG 3 cut(s) 205, 2472, 2599
BsmAI GTCTC 3 cut(s) 99, 1503, 1656
BsmBI CGTCTC 1 cut(s) 1503
BsmFI GGGAC 3 cut(s) 291, 2381, 2648
BsmI GAATGC 3 cut(s) 223, 1426, 2032
BsnI GGCC 3 cut(s) 285, 1541, 2603
BsoBI CYCGRG 1 cut(s) 489
Bsp1286I GDGCHC 4 cut(s) 254, 1380, 1680, 2341
Bsp1407I TGTACA 2 cut(s) 1647, 2331
Bsp143I GATC 7 cut(s) 85, 117, 778, 1204, 1405, 2226, 2643
BspACI CCGC 4 cut(s) 295, 1845, 1962, 2263
BspANI GGCC 3 cut(s) 285, 1541, 2603
BspCNI CTCAG 5 cut(s) 1278, 1748, 1928, 2215, 2590
BspFNI CGCG 1 cut(s) 2265
BspHI TCATGA 2 cut(s) 1489, 2091
BspLI GGNNCC 2 cut(s) 445, 1566
BspPI GGATC 3 cut(s) 93, 773, 2651
BspT107I GGYRCC 2 cut(s) 443, 1564
BsrGI TGTACA 2 cut(s) 1647, 2331
BsrI ACTGG 3 cut(s) 321, 1303, 2470
BssECI CCNNGG 3 cut(s) 152, 447, 1568
BssMI GATC 7 cut(s) 85, 117, 778, 1204, 1405, 2226, 2643
Bst2UI CCWGG 7 cut(s) 154, 206, 214, 449, 1103, 1553, 2532
Bst4CI ACNGT 6 cut(s) 112, 905, 937, 1457, 1531, 1684
Bst6I CTCTTC 2 cut(s) 469, 1251
BstAPI GCANNNNNTGC 2 cut(s) 236, 1532
BstAUI TGTACA 2 cut(s) 1647, 2331
BstC8I GCNNGC 8 cut(s) 35, 172, 243, 1051, 1237, 2149, 2353, 2685
BstEII GGTNACC 1 cut(s) 208
BstFNI CGCG 1 cut(s) 2265
BstH2I RGCGCY 1 cut(s) 1768
BstHHI GCGC 3 cut(s) 241, 1767, 2267
BstKTI GATC 7 cut(s) 88, 120, 781, 1207, 1408, 2229, 2646
BstMAI GTCTC 3 cut(s) 99, 1503, 1656
BstMBI GATC 7 cut(s) 85, 117, 778, 1204, 1405, 2226, 2643
BstNI CCWGG 7 cut(s) 154, 206, 214, 449, 1103, 1553, 2532
BstNSI RCATGY 4 cut(s) 48, 1039, 1889, 1951
BstPI GGTNACC 1 cut(s) 208
BstSCI CCNGG 8 cut(s) 152, 204, 212, 447, 1101, 1551, 1567, 2530
BstSFI CTRYAG 1 cut(s) 936
BstSLI GKGCMC 1 cut(s) 1680
BstUI CGCG 1 cut(s) 2265
BstV1I GCAGC 8 cut(s) 242, 728, 841, 967, 1294, 2163, 2446, 2449
BstV2I GAAGAC 1 cut(s) 560
BstXI CCANNNNNNTGG 1 cut(s) 2038
Bsu36I CCTNAGG 1 cut(s) 2598
BsuRI GGCC 3 cut(s) 285, 1541, 2603
BtsIMutI CAGTG 3 cut(s) 640, 910, 2477
Cac8I GCNNGC 8 cut(s) 35, 172, 243, 1051, 1237, 2149, 2353, 2685
CciI TCATGA 2 cut(s) 1489, 2091
CfoI GCGC 3 cut(s) 241, 1767, 2267
Cfr13I GGNCC 3 cut(s) 620, 1099, 2563
CsiI ACCWGGT 3 cut(s) 204, 1101, 2530
Csp6I GTAC 5 cut(s) 444, 1438, 1565, 1648, 2332
CviQI GTAC 5 cut(s) 444, 1438, 1565, 1648, 2332
DpnI GATC 7 cut(s) 87, 119, 780, 1206, 1407, 2228, 2645
DpnII GATC 7 cut(s) 85, 117, 778, 1204, 1405, 2226, 2643
Eam1104I CTCTTC 2 cut(s) 469, 1251
EarI CTCTTC 2 cut(s) 469, 1251
Eco24I GRGCYC 3 cut(s) 254, 1380, 2341
Eco32I GATATC 1 cut(s) 1125
Eco47I GGWCC 3 cut(s) 620, 1099, 2563
Eco57I CTGAAG 4 cut(s) 554, 566, 2085, 2193
Eco81I CCTNAGG 1 cut(s) 2598
Eco88I CYCGRG 1 cut(s) 489
Eco91I GGTNACC 1 cut(s) 208
EcoO109I RGGNCCY 1 cut(s) 620
EcoO65I GGTNACC 1 cut(s) 208
EcoRII CCWGG 7 cut(s) 152, 204, 212, 447, 1101, 1551, 2530
EcoRV GATATC 1 cut(s) 1125
EcoT22I ATGCAT 1 cut(s) 1981
EcoT38I GRGCYC 3 cut(s) 254, 1380, 2341
Esp3I CGTCTC 1 cut(s) 1503
FalI AAGNNNNNCTT 2 cut(s) 264, 296
FaqI GGGAC 3 cut(s) 291, 2381, 2648
FauNDI CATATG 3 cut(s) 166, 553, 712
FbaI TGATCA 1 cut(s) 1204
FriOI GRGCYC 3 cut(s) 254, 1380, 2341
FspBI CTAG 6 cut(s) 74, 227, 1545, 1640, 1745, 2246
FspI TGCGCA 1 cut(s) 240
GlaI GCGC 3 cut(s) 240, 1766, 2266
GsaI CCCAGC 2 cut(s) 249, 728
GsuI CTGGAG 1 cut(s) 2645
HaeII RGCGCY 1 cut(s) 1768
HaeIII GGCC 3 cut(s) 285, 1541, 2603
HapII CCGG 1 cut(s) 1568
HhaI GCGC 3 cut(s) 241, 1767, 2267
Hin6I GCGC 3 cut(s) 239, 1765, 2265
HinP1I GCGC 3 cut(s) 239, 1765, 2265
HincII GTYRAC 2 cut(s) 1627, 1945
HindII GTYRAC 2 cut(s) 1627, 1945
HindIII AAGCTT 2 cut(s) 2175, 2316
HinfI GANTC 9 cut(s) 148, 305, 658, 970, 1001, 1157, 1486, 2088, 2423
HpaI GTTAAC 1 cut(s) 1627
HpaII CCGG 1 cut(s) 1568
HphI GGTGA 4 cut(s) 202, 310, 463, 854
Hpy166II GTNNAC 9 cut(s) 318, 1060, 1099, 1165, 1271, 1627, 1678, 1722, 1945
Hpy8I GTNNAC 9 cut(s) 318, 1060, 1099, 1165, 1271, 1627, 1678, 1722, 1945
Hpy99I CGWCG 1 cut(s) 2499
HpyAV CCTTC 7 cut(s) 541, 674, 1247, 1487, 1754, 1989, 2648
HpyCH4III ACNGT 6 cut(s) 112, 905, 937, 1457, 1531, 1684
HspAI GCGC 3 cut(s) 239, 1765, 2265
KpnI GGTACC 2 cut(s) 447, 1568
Ksp22I TGATCA 1 cut(s) 1204
KspAI GTTAAC 1 cut(s) 1627
Kzo9I GATC 7 cut(s) 85, 117, 778, 1204, 1405, 2226, 2643
LmnI GCTCC 2 cut(s) 1244, 2010
Lsp1109I GCAGC 8 cut(s) 242, 728, 841, 967, 1294, 2163, 2446, 2449
MabI ACCWGGT 3 cut(s) 204, 1101, 2530
MaeI CTAG 6 cut(s) 74, 227, 1545, 1640, 1745, 2246
MaeIII GTNAC 5 cut(s) 208, 398, 907, 1457, 2122
MalI GATC 7 cut(s) 87, 119, 780, 1206, 1407, 2228, 2645
MboI GATC 7 cut(s) 85, 117, 778, 1204, 1405, 2226, 2643
MfeI CAATTG 1 cut(s) 1215
MhlI GDGCHC 4 cut(s) 254, 1380, 1680, 2341
MlyI GAGTC 3 cut(s) 314, 2097, 2417
MmeI TCCRAC 7 cut(s) 399, 788, 806, 819, 874, 1884, 2522
Mph1103I ATGCAT 1 cut(s) 1981
MseI TTAA 5 cut(s) 480, 1229, 1398, 1626, 2695
MslI CAYNNNNRTG 8 cut(s) 609, 1284, 1494, 1587, 1812, 1890, 2036, 2058
MspA1I CMGCKG 1 cut(s) 295
MspI CCGG 1 cut(s) 1568
MspR9I CCNGG 8 cut(s) 154, 206, 214, 449, 1103, 1553, 1569, 2532
MunI CAATTG 1 cut(s) 1215
Mva1269I GAATGC 3 cut(s) 223, 1426, 2032
MvaI CCWGG 7 cut(s) 154, 206, 214, 449, 1103, 1553, 2532
MvnI CGCG 1 cut(s) 2265
NciI CCSGG 1 cut(s) 1569
NdeI CATATG 3 cut(s) 166, 553, 712
NdeII GATC 7 cut(s) 85, 117, 778, 1204, 1405, 2226, 2643
NlaIV GGNNCC 2 cut(s) 445, 1566
NmuCI GTSAC 3 cut(s) 208, 907, 1457
NsbI TGCGCA 1 cut(s) 240
NsiI ATGCAT 1 cut(s) 1981
NspI RCATGY 4 cut(s) 48, 1039, 1889, 1951
PagI TCATGA 2 cut(s) 1489, 2091
PciI ACATGT 3 cut(s) 44, 1035, 1947
PctI GAATGC 3 cut(s) 223, 1426, 2032
PfeI GAWTC 6 cut(s) 148, 658, 970, 1001, 1157, 1486
PflFI GACNNNGTC 1 cut(s) 206
PflMI CCANNNNNTGG 2 cut(s) 205, 2472
PleI GAGTC 3 cut(s) 313, 2096, 2417
PpsI GAGTC 3 cut(s) 313, 2096, 2417
PpuMI RGGWCCY 1 cut(s) 620
PscI ACATGT 3 cut(s) 44, 1035, 1947
PsiI TTATAA 1 cut(s) 737
Psp5II RGGWCCY 1 cut(s) 620
Psp6I CCWGG 7 cut(s) 152, 204, 212, 447, 1101, 1551, 2530
PspEI GGTNACC 1 cut(s) 208
PspFI CCCAGC 2 cut(s) 245, 724
PspGI CCWGG 7 cut(s) 152, 204, 212, 447, 1101, 1551, 2530
PspN4I GGNNCC 2 cut(s) 445, 1566
PspPI GGNCC 3 cut(s) 620, 1099, 2563
PspPPI RGGWCCY 1 cut(s) 620
PsyI GACNNNGTC 1 cut(s) 206
RsaI GTAC 5 cut(s) 445, 1439, 1566, 1649, 2333
RsaNI GTAC 5 cut(s) 444, 1438, 1565, 1648, 2332
RseI CAYNNNNRTG 8 cut(s) 609, 1284, 1494, 1587, 1812, 1890, 2036, 2058
SaqAI TTAA 5 cut(s) 480, 1229, 1398, 1626, 2695
Sau3AI GATC 7 cut(s) 85, 117, 778, 1204, 1405, 2226, 2643
Sau96I GGNCC 3 cut(s) 620, 1099, 2563
SchI GAGTC 3 cut(s) 314, 2097, 2417
ScrFI CCNGG 8 cut(s) 154, 206, 214, 449, 1103, 1553, 1569, 2532
SduI GDGCHC 4 cut(s) 254, 1380, 1680, 2341
SexAI ACCWGGT 3 cut(s) 204, 1101, 2530
SfcI CTRYAG 1 cut(s) 936
SinI GGWCC 3 cut(s) 620, 1099, 2563
SmiMI CAYNNNNRTG 8 cut(s) 609, 1284, 1494, 1587, 1812, 1890, 2036, 2058
SpeI ACTAGT 1 cut(s) 1544
SsiI CCGC 4 cut(s) 295, 1845, 1962, 2263
SspI AATATT 1 cut(s) 1910
SspMI CTAG 6 cut(s) 74, 227, 1545, 1640, 1745, 2246
StyD4I CCNGG 8 cut(s) 152, 204, 212, 447, 1101, 1551, 1567, 2530
TaaI ACNGT 6 cut(s) 112, 905, 937, 1457, 1531, 1684
TaqI TCGA 6 cut(s) 134, 183, 607, 887, 1118, 2494
TatI WGTACW 2 cut(s) 1647, 2331
TauI GCSGC 3 cut(s) 298, 1847, 2265
TfiI GAWTC 6 cut(s) 148, 658, 970, 1001, 1157, 1486
Tru1I TTAA 5 cut(s) 480, 1229, 1398, 1626, 2695
Tru9I TTAA 5 cut(s) 480, 1229, 1398, 1626, 2695
TscAI CASTG 3 cut(s) 640, 910, 2477
TseFI GTSAC 3 cut(s) 208, 907, 1457
TseI GCWGC 8 cut(s) 230, 716, 854, 980, 1307, 2151, 2459, 2462
Tsp45I GTSAC 3 cut(s) 208, 907, 1457
TspGWI ACGGA 1 cut(s) 331
TspRI CASTG 3 cut(s) 640, 910, 2477
Tth111I GACNNNGTC 1 cut(s) 206
Van91I CCANNNNNTGG 2 cut(s) 205, 2472
VneI GTGCAC 1 cut(s) 1676
VpaK11BI GGWCC 3 cut(s) 620, 1099, 2563
XapI RAATTY 4 cut(s) 77, 467, 1400, 1578
XbaI TCTAGA 2 cut(s) 1639, 1744
XceI RCATGY 4 cut(s) 48, 1039, 1889, 1951
XcmI CCANNNNNNNNNTGG 2 cut(s) 1549, 2538
XspI CTAG 6 cut(s) 74, 227, 1545, 1640, 1745, 2246
Zsp2I ATGCAT 1 cut(s) 1981
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.