Rroxscaffold_7G00157070

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0007813
Physical Location & Seq
Reverse (-)
900290 .. 905425
5136 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00157070.1

Sequence Viewer

Length: 2190 bp
ATGCTGGAACGGGATGTTGTGTTGTGGAACACAATGCTCAAGGCATATGTGGAAATGGGTCTTCATGAAGAAGCACTTGCTCTTTTCTCCAAGTTTCATCGAAGTGGATTAGGTCCTGACCATGTTAGTATGCGTTGTGTTCTTAGTGGGATTCACAAAGTTGATTATGTTGAAGGCAAGAGGCACATGGAGGAGGTTCAAGCATATGCAGCAAAGCTGGGGGAGTTTATAACTAATGTGGATGATGATGCCCATCCAACGAGTTTATGTGATCCTACTACTAATTCCGACATATTTCTGTGGAACAAGAAGTTGTCTAAGTATATCCGAGCTGGTGAAAATTGGGCTGCAATAGAGTGCTTTAGAAGTATGATTATATCGAAAGTTGGATATGACAGTGTGACATTAGTTATCATTCTATCTGCGATTGTAGGCACAAATAATTTGGAGGTGGGGAAACAGATTCATGGTGCTGCTTTGAAATCAGATTTTGATTCTGTTCTTTTGGTAGCAAATAGCCTTATCAACATGTATTCAAAGGCTCGCTGTGTTCACTTTGCAAGAGAAGTATTCAATCACATGAAAGAAGTGGACCTAATTTCATGGAACTCGATGATATCATGTTATGTGCAAAGCGGTTCAGGAGAGGAATCAGTAAACCTATTTATTGGTTTATTACGGGATGGTCTAAGACCTGATCAATTTACAATTGCGAGTATTTTAAGGGCTTGCTCCTCTCTTCAAGAAGGGTTGCATCTCTGTAAACAGGTTCATGTTCATTCAATAAAAACTGGTATTGCTGCTGACAGATTTGTTTCAACAGCTCTTATTGATGTTTATTCCAGCGGTGGAAAGATGGAGGAAGCGGATCCCCTTTTAGAAAACAAAGTTAAATTCGATCTGGCATCTTGGAATGCATTGATGTTTGGGTACATAAAGAGTAATGACAGTCACAAAGCACTACAACTTATGAGGATGATTCATGAAGGTGGAAAGAGGGGAGACGAGATTACTTTGGCAACTGTTGCTAAGGCCACTAGTTGCCTGGTAGCGTTGGTACCGGGGAAACAAATTCATGCTCATGTCATAAAAACAGGGTATTCAAAGGACTTATATGTTAACAGCAGTATTCTAGATATGTACATAAAATGTGGAGACATGGGAAGTGCGCACACAGTTTTCAATGACATTCCTGCACCTGATGATGTTGCGTGGACAACTCTAATCTCAGGATGTCTAGAAAATGGAGATGAAGGGCGCTCTGTGTCTATATACCATCAGATGAGGCAGTCAGGAGTTCATCCCGATGAATACACCTTAGCTACCCTCGTCAAAGCCGCCTCTTGTCTGACAGCATTGGAACAAGGGAAACAGATACATGCAGATGCAATAAAGTTGGAATATTCCTCAGACCCTTATGTTGCGACATCACTTGTTGACATGTATGCCAAGTGCGGTAATATAGAAGATGCATATCGTTTATTTAGGAGGATGGATGTCGGGAGCATTGTCCTGTGGAATGCCATGTTGGTGGGCTTTGCTCAACATGGAGACGCTGAAGAAGCACTGAATCTTTTCAGAGTCATGAAATCTAATAACATTGTGCCTGATAGAGTTACTTTCATTGGAGTTCTTTCTGCTTGCAGCCACTCTGGTTTAGTTTCTGAAGCTTACGAGCATTTTTCTTCAATGCAAAGAGATTACGGCATTGAACTTGAGATTGAGCATTACTCTTGTCTAGTCAATGCCCTTAGCCGCGCAGGGCGTGTTCAAGAGGCAGAAAAGCTGATAGCATCAATGCCATTTGAAGCTTCTGCTTCAATGTACAGAGCCCTGCTCGGTGCTTGCAGGGTTCAAGGGGACACAGAAACAGGAAAACGAGTAGCAGAACAGCTCTTGGCTATTGAGCCAACTGACTCATTGGCTTATGTTCTCATATCCAATATGAATGCTGCTGCCAACCAGTGGGATGCTGTGAAAGATGCTCGACGAATGATGAAACAGAAGAATGTAAAGAAAGAACCAGGTTTCAGTTGGATAGATGTGAAGAACAAGGTCCATTTGTTTCTGGTAGATGATAAATCCCATCCTGAAGCCGATTTGATATACGACAAGCTGGAGGACTTGATGGAATGGATCGGCGAAGAAGGGTATGTCCCTGATACAGAGTTTGTGCTTGCTGATGTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0097159 GO:1901363
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1771 PAM2 PPR PPR_2 Smr

Protein Analysis

729

Amino Acids

80.92

Weight (kDa)

5.54

Isoelectric Point (pI)

36.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 4 - 51 2.6e-08 PPR repeat family
PPR_2 PF13041 198 - 245 1.8e-06 PPR repeat family
PPR_2 PF13041 400 - 446 8.1e-09 PPR repeat family
PPR_2 PF13041 502 - 549 1.7e-10 PPR repeat family
PPR PF01535 504 - 534 1.1e-06 PPR repeat
TPR_24 PF23276 507 - 596 1.4e-06 Fungal tetratrico peptide repeats
E_motif PF20431 621 - 681 9.1e-15 E motif
Eplus_motif PF20430 686 - 710 7.9e-08 E+ motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 230
Acc16I TGCGCA 1 cut(s) 1170
Acc65I GGTACC 1 cut(s) 1057
AccB1I GGYRCC 1 cut(s) 1057
AccB7I CCANNNNNTGG 1 cut(s) 1965
AccII CGCG 1 cut(s) 1758
AciI CCGC 6 cut(s) 636, 846, 866, 1338, 1455, 1756
AclWI GGATC 4 cut(s) 266, 863, 876, 2144
AcsI RAATTY 2 cut(s) 893, 1071
AcuI CTGAAG 3 cut(s) 1578, 1686, 2112
AfaI GTAC 4 cut(s) 932, 1059, 1142, 1826
AfiI CCNNNNNNNGG 1 cut(s) 1965
AflIII ACRYGT 2 cut(s) 528, 1440
AhlI ACTAGT 1 cut(s) 1037
AjnI CCWGG 2 cut(s) 1044, 2023
AjuI GAANNNNNNNTTGG 2 cut(s) 1511, 1543
AluBI AGCT 9 cut(s) 217, 332, 824, 1322, 1670, 1786, 1811, 1894, 2116
AluI AGCT 9 cut(s) 217, 332, 824, 1322, 1670, 1786, 1811, 1894, 2116
Alw26I GTCTC 3 cut(s) 996, 1149, 1545
AlwI GGATC 4 cut(s) 266, 863, 876, 2144
AoxI GGCC 1 cut(s) 1032
ApeKI GCWGC 7 cut(s) 209, 347, 473, 800, 1644, 1952, 1955
ApoI RAATTY 2 cut(s) 893, 1071
Asp700I GAANNNNTTC 1 cut(s) 1574
Asp718I GGTACC 1 cut(s) 1057
AspLEI GCGC 3 cut(s) 1171, 1260, 1760
AspS9I GGNCC 3 cut(s) 113, 592, 2056
AsuC2I CCSGG 1 cut(s) 1062
AsuHPI GGTGA 1 cut(s) 347
AvaII GGWCC 3 cut(s) 113, 592, 2056
BamHI GGATCC 1 cut(s) 868
BanI GGYRCC 1 cut(s) 1057
BanII GRGCYC 1 cut(s) 1834
BbsI GAAGAC 1 cut(s) 53
BbvI GCAGC 7 cut(s) 221, 334, 460, 787, 1656, 1939, 1942
BccI CCATC 7 cut(s) 261, 677, 850, 1284, 1486, 2094, 2122
BceAI ACGGC 1 cut(s) 1720
BciT130I CCWGG 2 cut(s) 1046, 2025
BclI TGATCA 1 cut(s) 697
BcnI CCSGG 1 cut(s) 1062
BcoDI GTCTC 3 cut(s) 996, 1149, 1545
BcuI ACTAGT 1 cut(s) 1037
BfaI CTAG 4 cut(s) 1038, 1133, 1238, 1739
BfoI RGCGCY 1 cut(s) 1261
BisI GCNGC 9 cut(s) 210, 348, 474, 801, 1338, 1645, 1756, 1953, 1956
BlsI GCNGC 9 cut(s) 211, 349, 475, 802, 1339, 1646, 1757, 1954, 1957
Bme1390I CCNGG 3 cut(s) 1046, 1062, 2025
Bme18I GGWCC 3 cut(s) 113, 592, 2056
BmgT120I GGNCC 3 cut(s) 113, 592, 2056
BmiI GGNNCC 2 cut(s) 870, 1059
BmrFI CCNGG 3 cut(s) 1046, 1062, 2025
BmsI GCATC 8 cut(s) 238, 763, 914, 1375, 1459, 1802, 1960, 1972
BpiI GAAGAC 1 cut(s) 53
BplI GAGNNNNNCTC 4 cut(s) 1715, 1747, 1821, 1853
BpmI CTGGAG 1 cut(s) 2138
Bpu10I CCTNAGC 3 cut(s) 1029, 1318, 1751
BpuEI CTTGAG 2 cut(s) 23, 1736
BpuMI CCSGG 1 cut(s) 1062
BsaBI GATNNNNATC 2 cut(s) 252, 1473
BsaJI CCNNGG 1 cut(s) 1061
Bsc4I CCNNNNNNNGG 1 cut(s) 1965
Bse1I ACTGG 2 cut(s) 796, 1963
Bse8I GATNNNNATC 2 cut(s) 252, 1473
BseBI CCWGG 2 cut(s) 1046, 2025
BseDI CCNNGG 1 cut(s) 1061
BseJI GATNNNNATC 2 cut(s) 252, 1473
BseLI CCNNNNNNNGG 1 cut(s) 1965
BseMII CTCAG 2 cut(s) 1242, 1422
BseNI ACTGG 2 cut(s) 796, 1963
BseRI GAGGAG 2 cut(s) 206, 724
BseXI GCAGC 7 cut(s) 221, 334, 460, 787, 1656, 1939, 1942
BseYI CCCAGC 1 cut(s) 217
BsgI GTGCAG 1 cut(s) 1179
Bsh1236I CGCG 1 cut(s) 1758
BshFI GGCC 1 cut(s) 1034
BshNI GGYRCC 1 cut(s) 1057
BsiSI CCGG 1 cut(s) 1061
BslFI GGGAC 2 cut(s) 1874, 2141
BslI CCNNNNNNNGG 1 cut(s) 1965
BsmAI GTCTC 3 cut(s) 996, 1149, 1545
BsmBI CGTCTC 2 cut(s) 996, 1545
BsmFI GGGAC 2 cut(s) 1874, 2141
BsmI GAATGC 3 cut(s) 919, 1525, 1954
BsnI GGCC 1 cut(s) 1034
Bsp1286I GDGCHC 1 cut(s) 1834
Bsp1407I TGTACA 2 cut(s) 1140, 1824
Bsp143I GATC 5 cut(s) 271, 697, 868, 898, 2136
BspACI CCGC 6 cut(s) 636, 846, 866, 1338, 1455, 1756
BspANI GGCC 1 cut(s) 1034
BspCNI CTCAG 2 cut(s) 1241, 1421
BspFNI CGCG 1 cut(s) 1758
BspHI TCATGA 3 cut(s) 64, 982, 1584
BspLI GGNNCC 2 cut(s) 870, 1059
BspPI GGATC 4 cut(s) 266, 863, 876, 2144
BspT107I GGYRCC 1 cut(s) 1057
BsrGI TGTACA 2 cut(s) 1140, 1824
BsrI ACTGG 2 cut(s) 796, 1963
BssECI CCNNGG 1 cut(s) 1061
BssMI GATC 5 cut(s) 271, 697, 868, 898, 2136
Bst2UI CCWGG 2 cut(s) 1046, 2025
Bst4CI ACNGT 4 cut(s) 398, 950, 1024, 1177
Bst6I CTCTTC 1 cut(s) 744
BstAPI GCANNNNNTGC 1 cut(s) 1025
BstAUI TGTACA 2 cut(s) 1140, 1824
BstC8I GCNNGC 5 cut(s) 544, 730, 1642, 1846, 2178
BstDEI CTNAG 8 cut(s) 143, 318, 689, 1029, 1228, 1318, 1408, 1751
BstFNI CGCG 1 cut(s) 1758
BstH2I RGCGCY 1 cut(s) 1261
BstHHI GCGC 3 cut(s) 1171, 1260, 1760
BstKTI GATC 5 cut(s) 274, 700, 871, 901, 2139
BstMAI GTCTC 3 cut(s) 996, 1149, 1545
BstMBI GATC 5 cut(s) 271, 697, 868, 898, 2136
BstMWI GCNNNNNNNGC 3 cut(s) 209, 1025, 1562
BstNI CCWGG 2 cut(s) 1046, 2025
BstNSI RCATGY 3 cut(s) 532, 1382, 1444
BstSCI CCNGG 3 cut(s) 1044, 1060, 2023
BstUI CGCG 1 cut(s) 1758
BstV1I GCAGC 7 cut(s) 221, 334, 460, 787, 1656, 1939, 1942
BstV2I GAAGAC 1 cut(s) 53
BstX2I RGATCY 1 cut(s) 868
BstXI CCANNNNNNTGG 1 cut(s) 1531
BstYI RGATCY 1 cut(s) 868
BsuRI GGCC 1 cut(s) 1034
BtsIMutI CAGTG 3 cut(s) 403, 1565, 1970
Cac8I GCNNGC 5 cut(s) 544, 730, 1642, 1846, 2178
CciI TCATGA 3 cut(s) 64, 982, 1584
CfoI GCGC 3 cut(s) 1171, 1260, 1760
Cfr13I GGNCC 3 cut(s) 113, 592, 2056
CseI GACGC 1 cut(s) 1562
CsiI ACCWGGT 1 cut(s) 2023
Csp6I GTAC 4 cut(s) 931, 1058, 1141, 1825
CviQI GTAC 4 cut(s) 931, 1058, 1141, 1825
DdeI CTNAG 8 cut(s) 143, 318, 689, 1029, 1228, 1318, 1408, 1751
DpnI GATC 5 cut(s) 273, 699, 870, 900, 2138
DpnII GATC 5 cut(s) 271, 697, 868, 898, 2136
Eam1104I CTCTTC 1 cut(s) 744
EarI CTCTTC 1 cut(s) 744
Eco24I GRGCYC 1 cut(s) 1834
Eco32I GATATC 1 cut(s) 618
Eco47I GGWCC 3 cut(s) 113, 592, 2056
Eco57I CTGAAG 3 cut(s) 1578, 1686, 2112
EcoO109I RGGNCCY 1 cut(s) 113
EcoRII CCWGG 2 cut(s) 1044, 2023
EcoRV GATATC 1 cut(s) 618
EcoT22I ATGCAT 2 cut(s) 919, 1474
EcoT38I GRGCYC 1 cut(s) 1834
Esp3I CGTCTC 2 cut(s) 996, 1545
FalI AAGNNNNNCTT 2 cut(s) 60, 92
FaqI GGGAC 2 cut(s) 1874, 2141
FauNDI CATATG 2 cut(s) 46, 205
FbaI TGATCA 1 cut(s) 697
Fnu4HI GCNGC 9 cut(s) 210, 348, 474, 801, 1338, 1645, 1756, 1953, 1956
FriOI GRGCYC 1 cut(s) 1834
Fsp4HI GCNGC 9 cut(s) 210, 348, 474, 801, 1338, 1645, 1756, 1953, 1956
FspAI RTGCGCAY 1 cut(s) 1170
FspBI CTAG 4 cut(s) 1038, 1133, 1238, 1739
FspI TGCGCA 1 cut(s) 1170
GlaI GCGC 3 cut(s) 1170, 1259, 1759
GluI GCNGC 9 cut(s) 210, 348, 474, 801, 1338, 1645, 1756, 1953, 1956
GsaI CCCAGC 1 cut(s) 221
GsuI CTGGAG 1 cut(s) 2138
HaeII RGCGCY 1 cut(s) 1261
HaeIII GGCC 1 cut(s) 1034
HapII CCGG 1 cut(s) 1061
HgaI GACGC 1 cut(s) 1562
HhaI GCGC 3 cut(s) 1171, 1260, 1760
Hin6I GCGC 3 cut(s) 1169, 1258, 1758
HinP1I GCGC 3 cut(s) 1169, 1258, 1758
HincII GTYRAC 2 cut(s) 1120, 1438
HindII GTYRAC 2 cut(s) 1120, 1438
HindIII AAGCTT 2 cut(s) 1668, 1809
HinfI GANTC 8 cut(s) 151, 463, 494, 650, 979, 1570, 1581, 1916
HpaI GTTAAC 1 cut(s) 1120
HpaII CCGG 1 cut(s) 1061
HphI GGTGA 1 cut(s) 347
Hpy166II GTNNAC 7 cut(s) 553, 592, 658, 764, 1120, 1215, 1438
Hpy188I TCNGA 8 cut(s) 289, 329, 487, 1281, 1350, 1411, 1580, 1666
Hpy8I GTNNAC 7 cut(s) 553, 592, 658, 764, 1120, 1215, 1438
Hpy99I CGWCG 1 cut(s) 1992
HpyAV CCTTC 5 cut(s) 167, 740, 980, 1247, 2141
HpyCH4III ACNGT 4 cut(s) 398, 950, 1024, 1177
HpyF10VI GCNNNNNNNGC 3 cut(s) 209, 1025, 1562
HpyF3I CTNAG 8 cut(s) 143, 318, 689, 1029, 1228, 1318, 1408, 1751
HspAI GCGC 3 cut(s) 1169, 1258, 1758
KpnI GGTACC 1 cut(s) 1061
Ksp22I TGATCA 1 cut(s) 697
KspAI GTTAAC 1 cut(s) 1120
Kzo9I GATC 5 cut(s) 271, 697, 868, 898, 2136
LmnI GCTCC 2 cut(s) 737, 1503
Lsp1109I GCAGC 7 cut(s) 221, 334, 460, 787, 1656, 1939, 1942
LweI GCATC 8 cut(s) 238, 763, 914, 1375, 1459, 1802, 1960, 1972
MabI ACCWGGT 1 cut(s) 2023
MaeI CTAG 4 cut(s) 1038, 1133, 1238, 1739
MaeIII GTNAC 3 cut(s) 400, 950, 1615
MalI GATC 5 cut(s) 273, 699, 870, 900, 2138
MboI GATC 5 cut(s) 271, 697, 868, 898, 2136
MboII GAAGA 9 cut(s) 53, 80, 731, 1478, 1571, 1677, 2017, 2059, 2156
MfeI CAATTG 1 cut(s) 708
MflI RGATCY 1 cut(s) 868
MhlI GDGCHC 1 cut(s) 1834
MluCI AATT 8 cut(s) 283, 340, 442, 597, 701, 708, 893, 1071
MlyI GAGTC 2 cut(s) 1590, 1910
MmeI TCCRAC 5 cut(s) 281, 312, 367, 1377, 2015
Mph1103I ATGCAT 2 cut(s) 919, 1474
MroXI GAANNNNTTC 1 cut(s) 1574
MseI TTAA 4 cut(s) 722, 891, 1119, 2188
MslI CAYNNNNRTG 6 cut(s) 102, 987, 1080, 1305, 1383, 1529
MspA1I CMGCKG 1 cut(s) 846
MspI CCGG 1 cut(s) 1061
MspR9I CCNGG 3 cut(s) 1046, 1062, 2025
MunI CAATTG 1 cut(s) 708
Mva1269I GAATGC 3 cut(s) 919, 1525, 1954
MvaI CCWGG 2 cut(s) 1046, 2025
MvnI CGCG 1 cut(s) 1758
MwoI GCNNNNNNNGC 3 cut(s) 209, 1025, 1562
NciI CCSGG 1 cut(s) 1062
NdeI CATATG 2 cut(s) 46, 205
NdeII GATC 5 cut(s) 271, 697, 868, 898, 2136
NlaIV GGNNCC 2 cut(s) 870, 1059
NmuCI GTSAC 2 cut(s) 400, 950
NsbI TGCGCA 1 cut(s) 1170
NsiI ATGCAT 2 cut(s) 919, 1474
NspI RCATGY 3 cut(s) 532, 1382, 1444
PagI TCATGA 3 cut(s) 64, 982, 1584
PciI ACATGT 2 cut(s) 528, 1440
PctI GAATGC 3 cut(s) 919, 1525, 1954
PdmI GAANNNNTTC 1 cut(s) 1574
PfeI GAWTC 6 cut(s) 151, 463, 494, 650, 979, 1570
PflMI CCANNNNNTGG 1 cut(s) 1965
PkrI GCNGC 9 cut(s) 211, 349, 475, 802, 1339, 1646, 1757, 1954, 1957
PleI GAGTC 2 cut(s) 1589, 1910
PpsI GAGTC 2 cut(s) 1589, 1910
PpuMI RGGWCCY 1 cut(s) 113
PscI ACATGT 2 cut(s) 528, 1440
PsiI TTATAA 1 cut(s) 230
Psp5II RGGWCCY 1 cut(s) 113
Psp6I CCWGG 2 cut(s) 1044, 2023
PspFI CCCAGC 1 cut(s) 217
PspGI CCWGG 2 cut(s) 1044, 2023
PspN4I GGNNCC 2 cut(s) 870, 1059
PspPI GGNCC 3 cut(s) 113, 592, 2056
PspPPI RGGWCCY 1 cut(s) 113
PsuI RGATCY 1 cut(s) 868
RsaI GTAC 4 cut(s) 932, 1059, 1142, 1826
RsaNI GTAC 4 cut(s) 931, 1058, 1141, 1825
RseI CAYNNNNRTG 6 cut(s) 102, 987, 1080, 1305, 1383, 1529
SaqAI TTAA 4 cut(s) 722, 891, 1119, 2188
SatI GCNGC 9 cut(s) 210, 348, 474, 801, 1338, 1645, 1756, 1953, 1956
Sau3AI GATC 5 cut(s) 271, 697, 868, 898, 2136
Sau96I GGNCC 3 cut(s) 113, 592, 2056
SchI GAGTC 2 cut(s) 1590, 1910
ScrFI CCNGG 3 cut(s) 1046, 1062, 2025
SduI GDGCHC 1 cut(s) 1834
SexAI ACCWGGT 1 cut(s) 2023
SfaNI GCATC 8 cut(s) 238, 763, 914, 1375, 1459, 1802, 1960, 1972
SinI GGWCC 3 cut(s) 113, 592, 2056
SmiMI CAYNNNNRTG 6 cut(s) 102, 987, 1080, 1305, 1383, 1529
SmlI CTYRAG 2 cut(s) 38, 1715
SmoI CTYRAG 2 cut(s) 38, 1715
SpeI ACTAGT 1 cut(s) 1037
Sse9I AATT 8 cut(s) 283, 340, 442, 597, 701, 708, 893, 1071
SsiI CCGC 6 cut(s) 636, 846, 866, 1338, 1455, 1756
SspI AATATT 1 cut(s) 1403
SspMI CTAG 4 cut(s) 1038, 1133, 1238, 1739
StyD4I CCNGG 3 cut(s) 1044, 1060, 2023
TaaI ACNGT 4 cut(s) 398, 950, 1024, 1177
TaqI TCGA 5 cut(s) 100, 380, 611, 897, 1987
TasI AATT 8 cut(s) 283, 340, 442, 597, 701, 708, 893, 1071
TatI WGTACW 2 cut(s) 1140, 1824
TauI GCSGC 2 cut(s) 1340, 1758
TfiI GAWTC 6 cut(s) 151, 463, 494, 650, 979, 1570
Tru1I TTAA 4 cut(s) 722, 891, 1119, 2188
Tru9I TTAA 4 cut(s) 722, 891, 1119, 2188
TscAI CASTG 3 cut(s) 403, 1572, 1970
TseFI GTSAC 2 cut(s) 400, 950
TseI GCWGC 7 cut(s) 209, 347, 473, 800, 1644, 1952, 1955
Tsp45I GTSAC 2 cut(s) 400, 950
TspRI CASTG 3 cut(s) 403, 1572, 1970
Van91I CCANNNNNTGG 1 cut(s) 1965
VpaK11BI GGWCC 3 cut(s) 113, 592, 2056
XapI RAATTY 2 cut(s) 893, 1071
XbaI TCTAGA 2 cut(s) 1132, 1237
XceI RCATGY 3 cut(s) 532, 1382, 1444
XcmI CCANNNNNNNNNTGG 2 cut(s) 1042, 2031
XmnI GAANNNNTTC 1 cut(s) 1574
XspI CTAG 4 cut(s) 1038, 1133, 1238, 1739
Zsp2I ATGCAT 2 cut(s) 919, 1474
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.