Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0005756

Physical Location & Seq

Genomic Coordinates Reverse (-)

16625517 .. 16631370

Gene Structure 5854 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G34900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 4062 bp

ATGGAGCAGAACGAGTTCATGGAGGCAATAATGTACGTTAATGGTGTTCGTAGAGTTTTGCCTGATGGATTAGCTCACATGACGCTTCTCGAATATCTCAGAGATTTAGGATTGACCGGGACAAAGCTCGGATGCGGCGAAGGTGGTTGTGGGTCTTGCACCGTGATGGTGTCTAGTTATGACCGAGAGTCAAAGACATGTGTGCATTATGCTGTCAACGCTTGCCTAGCACCTCTCTACTCTGTAGAAGGGATGCATGTAATATCCATTGAAGGAGTTGGTCATCGGAAACTTGGCTTGCACCCTCTTCAGGAGTCATTGGCATCTTCGCATGGTTCTCAATGTGGGTTTTGTACTCCCGGTTTTGTCATGTCGATGTATGCCTTGTTGAGGTCAAGTAAAAACTCACCTTCTGAGGAGGAGATTGAAGAATGCCTTGCAGGAAATTTGTGTCGTTGTACTGGTTATAGACCCATCATTGATGCGTTTCGGGTTTTTGCAAAATCTGATGATGCTCTATACAGTGGTTTATCTTCACTTAGCCTTCAGGACGGTTCAAATATTTGTCCATCTACTGGCAAACCTTGTTCTTGTGGATCAAAAACAACAAGTGAAGCAGCTACTTGTAATGAAGATAGATTTCAGTCAATCTCTTATAGTGATATAGATGGAGCTAAGTATACAGATAAGGAGCTTATTTTTCCCCCTGAACTTCTGCTGAGGAAGTTAGCTCCCTTAAAGTTAGGGGGAAATGAGGGGATTACCTGGTATAGACCCGTAAGTCTTCAGAACTTGCTTGAACTCAAAGCAAATTTTCCTGATGCAAAACTACTGGTTGGTAACACGGAGGTGGGAATCGAAATGAGACTAAAGAGGTTACAGTATCCGGTGCTAATCTCTGCTGCTCAAGTCCCAGAACTCAACGCATTGAATGTCAATGACAATGGGATAGAGGTTGGTTCAGCTTTGAGACTTTCTGAACTCCTGAGGTTATTCAGGAAGGTAGTAAAGGAGCGTCCTGCACATGAAACATCAGCATGCAAGGCTTTTATCGAACAGCTGAAGTGGTTTGCTGGGACACAAATAAGAAATGTTGCTTGCATTGGTGGAAACATCTGTACAGCTAGTCCAATATCTGATTTAAATCCTCTTTGGATGGCTTCAAGAGCAGAGTTTCGGATAATCAACTGCAATGGAGATGTTAGATCTATACCTGCAAAAGATTTCTTCCTTGGCTATCGTAAAGTGGATATGGGAAGCAACGAGATCTTGTTGTCGGTATTCCTTCCATGGACAAGGCCTTTAGAGTATGTGAAAGAATTTAAGCAGGCCCATCGCAGGGATGATGATATAGCTATTGTCAATGGTGGAATGCGTGTGTTTCTTGAAGAGAAAGGGCAACAATTGTTTGTTTCTGATGCATCTATTGTTTATGGTGGTGTGGCTCCTCTTTCGTTGCGTGCAAGAAACACTGAGGAACTTCTAATTGGTAAGAATTGGAATAAATGTCTTCTGCAAGACGCACTTAAGGTCATACAGAGTGATGTCTTGATTAAGGAAGGTGCTCCTGGGGGAATGGTGGAGTTTCGCAAATCTCTAACCCTAAGCTTCTTCTTTAAATTTTTCTTATGGGTTACTCATCATGTAAATAATGTAAATCCCACTATAGAGACCTTTCCACCCTCGCATATGTCAGCTGTGCAACTTGTTCCTCGGTTCTCTAGAATTGGAAAACAAGACTATGAGACAGTAAAACAGGGTACATCTGTTGGCTTGCCAGAGGTCCATCTTTCGGCAAGAATGCAGGTCACAGGGGAAGCAGAATATACTGATGATACCCCATTGCCGCCTTGTACCTTGCATGCTGCTTTAGTGCTAAGTAAAGTTCCACATGCCCGCATCCTTTCAGTTGATGATTCGGCAGCCAAATCTTCATCTGGTTTTGTTGGTCTGTTTCTTGCCAAAGATGTTCCCGGGAATAATATGATTGGACCAATTGTTGCCGACGAAGAATTATTTGCTACAGACGTGGTCACGTGTGTGGGACAAGTCATTGGTGTGCTTGTCGCGGATACACATGAAAATGCAAAAACTGCAGCAAGAAAAGTTGACGTTAGGTATCAGGAACTGCCAGCAATATTATCAATCAAGGAGGCGATTAATGCTAAAAGTTTCCATCCGAACACAGAGAGAAGGCTTAGAAAAGGGGATGTCGAGCTGTGCTTTCAATCTGGTCAGTGTGACAGAATAATAGAGGGAGAGGTTCAAATGGGTGGTCAGGAACACTTTTACTTGGAGCCTAATGGTAGTTTGGTTTGGACTATAGATGGAGGCAACGAAGTTCATATGATTTCATCCACACAAGCTCCTCAACAGCACCAGAAATATGTGTCTCATGTTCTTGGTCTTCCAATGTCTAAAGTGGTATGCAAAACCAAACGACTTGGTGGTGGCTTTGGTGGTAAGGAAACAAGATCAGCTTTCATTGCTGCAGCAGCTTCTGTTCCTTCCTACCTATTGAATCGACCCGTGAAACTCATACTGGACAGAGATGTGGACATGATGATTACTGGTCATCGCCATAGTTTCGTTGGAAAGTACAAGGTTGGATTTACGAACGAAGGGAAAATATTGGCGTTGGACCTTGAAATCTACAACAATGGTGGAAACTCTATGGATCTCTCTCTTTCTAATCTTGAACGTGCCATGTTTCACTCGGATAACGTTTATGAGATCCCACATGTGAGGATCGTTGGGAACGTTTGCTTTACTAATTTTCCCAGCAACACCGCTTTCCGAGGGTTTGGAGGGCCCCAAGGTATGCTTATAACTGAAAATTGGATTCAGAGAATTGCAGCTGAGCTGGATAAAATCCCTGAAGAAATCAAAGAGATGAACTTTCAAGTGGAAGGATCGATCACACATTACTTTCAGTCACTTCAGCACTGCACATTGCACCAACTCTGGAAAGAACTGAAAGTATCCAGCAACTTCCTAAAGACTCGTAGAGAAGCGGACGAGTTTAATAGTCATAATCGGTGGAAAAAGCGTGGTGTAGCTATGGTTCCCACAAAATTTGGCATATCCTTTACCACAAAGTTCATGAATCAGGCCGGTGCTCTTGTTCACGTTTACACCGATGGGACTGTTTTGGTGACACATGGAGGTGTTGAGATGGGCCAAGGGTTGCATACAAAGGTTGCTCAAGTTGCTGCAACGGCCTTTAACATTCTCCTTAGTTCGGTTTTTGTGTCAGAAACAAGCACCGACAAGGTTCCTAATGCGTCACCTACTGCTGCTTCTGCGAGTTCTGATATGTATGGTGCTGCAGTTTTAGACGCTTGTGAGCAGATTATAGCAAGAATGGAGCCTGTTGCATCTAAACACAATTTCAACACATTCTCTGAGCTAGCAAGTGCCTGCTACTTTCAACGTATAGACCTATCAGCTCACGGTTTTCACATTGTTCCAGAACTTGAATTTGATTGGGTATCTGGAAAAGGGAACGCATATAGATATTACACATATGGAGCTGCCTTTGCTGAAGTTGAGATAGATACATTGACTGGTGATTTTCACACAAGAAAAGCAGACATAATGTTGGATCTCGGATATTCTCTTAACCCAACCATTGATATTGGACAAATAGAAGGAGCGTTTGTACAAGGACTAGGTTGGGTAGCTCTAGAAGAACTCAAGTGGGGAGATGCAGCTCATAAATGGATTAAACCAGGAAGTTTACTCACTTGCGGACCCGGAAGCTACAAAATACCTTCCATCAACGACATGCCGTTCCAACTGAATGTTTCTCTTCTCAAGGGTAATCCAAATGCAAAGGCAATACATTCATCTAAAGCAGTGGGTGAGCCACCGTTCTTTCTTGCAGCATCAGCCTTCTTTGCAATAAAGGAAGCAATCAAAGCGGCTAGAAGCGAGGTAGGTCTCACCAACTGGTTCCCTCTGGAGACTCCAGCCACTCCAGAGCGTATCAGGATGGCTTGTTTCGACGAGTTTTCAGCTCCTTTTGCAAATTCAGATTTCTGCCCAAAGCTTAGTGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0000302 GO:0001101 GO:0003674 GO:0003824 GO:0004854 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006139 GO:0006144 GO:0006145 GO:0006725 GO:0006801 GO:0006807 GO:0006950 GO:0006979 GO:0008150 GO:0008152 GO:0009056 GO:0009112 GO:0009115 GO:0009414 GO:0009415 GO:0009628 GO:0009987 GO:0010035 GO:0016491 GO:0016725 GO:0016726 GO:0016903 GO:0019439 GO:0034641 GO:0036094 GO:0042221 GO:0042554 GO:0043167 GO:0043168 GO:0043546 GO:0044237 GO:0044238 GO:0044248 GO:0044270 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046110 GO:0046113 GO:0046483 GO:0046700 GO:0048037 GO:0050660 GO:0050662 GO:0050896 GO:0051536 GO:0051537 GO:0051540 GO:0055086 GO:0055114 GO:0071704 GO:0072521 GO:0072523 GO:0072593 GO:0097159 GO:1901265 GO:1901360 GO:1901361 GO:1901363 GO:1901564 GO:1901565 GO:1901575 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00230 ko00232 ko00983 ko01100 ko01110 ko01120 ko04146 map00230 map00232 map00983 map01100 map01110 map01120 map04146

Pfam Domains

Protein Families

Ald_Xan_dh_C Ald_Xan_dh_C2 CO_deh_flav_C FAD_binding_5 Fer2 Fer2_2

Protein Analysis

1353

Amino Acids

148.76

Weight (kDa)

6.27

Isoelectric Point (pI)

38.93

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Fer2	PF00111	13 - 78	1.2e-08	2Fe-2S iron-sulfur cluster binding domain
Fer2_2	PF01799	90 - 163	1.4e-30	[2Fe-2S] binding domain
FAD_binding_5	PF00941	254 - 431	6.5e-49	FAD binding domain in molybdopterin dehydrogenase
CO_deh_flav_C	PF03450	440 - 545	2.7e-27	CO dehydrogenase flavoprotein C-terminal domain
Ald_Xan_dh_C	PF01315	604 - 711	9.5e-30	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
MoCoBD_1	PF02738	728 - 967	3e-85	Molybdopterin cofactor-binding domain
MoCoBD_2	PF20256	992 - 1264	2.1e-89	Molybdopterin cofactor-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Publication-ready

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Orthologous Genes (Group: OG0005756)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G34890 AT4G34900 AT4G34900 AT4G34900
fragaria_vesca	FvH4_3g29000 FvH4_3g29000 FvH4_3g29000 FvH4_3g29000
malus_domestica	MD03G1177200.v1.1 MD11G1161000.v1.1 MD11G1197900.v1.1
prunus_persica	Prupe.4G245700_v2.0.a1 Prupe.4G245700_v2.0.a1
pyrus_communis	pycom11g13410 pycom11g17110 pycom11g17120
rosa_chinensis	RchiOBHm_Chr5g0051661
rosa_laevigata	RLG00000034866
rosa_multiflora	Rmu_sc0000068.1_g000026 Rmu_sc0014882.1_g000001 Rmu_sc0018333.1_g000002
rosa_roxburghii	Rroxscaffold_1G00027170
rosa_rugosa	Rorug05G0277900
rosa_samantha	Rh5AG349700 Rh5BG361400 Rh5CG385900 Rh5DG376200
rosa_wichuraiana	Rw5G033070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2828
AasI	GACNNNNNNGTC	1 cut(s)	780
Acc36I	ACCTGC	2 cut(s)	1222, 1795
AccB7I	CCANNNNNTGG	1 cut(s)	575
AccI	GTMKAC	1 cut(s)	680
AccII	CGCG	1 cut(s)	2069
AciI	CCGC	8 cut(s)	135, 1847, 1897, 2069, 2790, 3014, 3750, 3923
AclI	AACGTT	2 cut(s)	2724, 2760
AclWI	GGATC	6 cut(s)	604, 2685, 2728, 2756, 2920, 3612
AcsI	RAATTY	7 cut(s)	445, 811, 1319, 1619, 3074, 3479, 4030
AcuI	CTGAAG	7 cut(s)	293, 530, 770, 1082, 2898, 2924, 3564
AcvI	CACGTG	1 cut(s)	2037
AfaI	GTAC	8 cut(s)	35, 355, 460, 1120, 1762, 1855, 2600, 3663
AfiI	CCNNNNNNNGG	7 cut(s)	310, 390, 575, 1338, 1339, 1792, 3241
AflII	CTTAAG	1 cut(s)	1526
AflIII	ACRYGT	3 cut(s)	197, 2036, 2740
AhdI	GACNNNNNGTC	1 cut(s)	187
AjiI	CACGTC	1 cut(s)	2029
AjnI	CCWGG	3 cut(s)	764, 1567, 3730
AjuI	GAANNNNNNNTTGG	2 cut(s)	1470, 1502
AleI	CACNNNNGTG	2 cut(s)	848, 2039
Alw21I	GWGCWC	2 cut(s)	1567, 3121
Alw26I	GTCTC	7 cut(s)	859, 964, 1664, 1739, 2397, 3947, 3959
AlwI	GGATC	6 cut(s)	604, 2685, 2728, 2756, 2920, 3612
AlwNI	CAGNNNCTG	2 cut(s)	2128, 2501
Ama87I	CYCGRG	1 cut(s)	1973
AoxI	GGCC	6 cut(s)	1298, 1329, 2810, 3111, 3178, 3219
ApaI	GGGCCC	1 cut(s)	2814
ApoI	RAATTY	7 cut(s)	445, 811, 1319, 1619, 3074, 3479, 4030
ArsI	GACNNNNNNTTYG	2 cut(s)	2260, 2292
AseI	ATTAAT	1 cut(s)	2160
Asp700I	GAANNNNTTC	1 cut(s)	14
AspS9I	GGNCC	8 cut(s)	1330, 1783, 1991, 2641, 2810, 2811, 3178, 3752
AsuC2I	CCSGG	5 cut(s)	118, 360, 1974, 1975, 3756
AsuHPI	GGTGA	6 cut(s)	399, 3166, 3279, 3581, 3875, 3937
AsuNHI	GCTAGC	1 cut(s)	3409
AvaI	CYCGRG	1 cut(s)	1973
AvaII	GGWCC	4 cut(s)	1783, 1991, 2641, 3752
AxyI	CCTNAGG	1 cut(s)	986
BaeGI	GKGCMC	1 cut(s)	2814
BaeI	ACNNNNGTAYC	2 cut(s)	1752, 1785
BanII	GRGCYC	1 cut(s)	2814
BbrPI	CACGTG	1 cut(s)	2037
BbsI	GAAGAC	3 cut(s)	776, 1502, 2399
Bbv12I	GWGCWC	2 cut(s)	1567, 3121
BbvCI	CCTCAGC	1 cut(s)	719
BceAI	ACGGC	2 cut(s)	3234, 3775
BcgI	CGANNNNNNTGC	2 cut(s)	1316, 1350
BciT130I	CCWGG	3 cut(s)	766, 1569, 3732
BciVI	GTATCC	3 cut(s)	894, 2065, 2992
BcnI	CCSGG	5 cut(s)	118, 360, 1974, 1975, 3756
BcoDI	GTCTC	7 cut(s)	859, 964, 1664, 1739, 2397, 3947, 3959
BfaI	CTAG	8 cut(s)	174, 227, 1125, 1722, 3410, 3671, 3686, 3927
BfmI	CTRYAG	7 cut(s)	243, 1665, 2022, 2094, 2322, 2490, 3327
BfrI	CTTAAG	1 cut(s)	1526
BfuAI	ACCTGC	2 cut(s)	1222, 1795
BfuI	GTATCC	3 cut(s)	894, 2065, 2992
BglII	AGATCT	2 cut(s)	1205, 1266
BlpI	GCTNAGC	1 cut(s)	2859
Bme1390I	CCNGG	8 cut(s)	118, 360, 766, 1569, 1974, 1975, 3732, 3756
Bme18I	GGWCC	4 cut(s)	1783, 1991, 2641, 3752
BmeRI	GACNNNNNGTC	1 cut(s)	187
BmeT110I	CYCGRG	1 cut(s)	1973
BmgBI	CACGTC	1 cut(s)	2029
BmgT120I	GGNCC	8 cut(s)	1330, 1783, 1991, 2641, 2810, 2811, 3178, 3752
BmiI	GGNNCC	9 cut(s)	1446, 2298, 2812, 2813, 3066, 3276, 3369, 3754, 3956
BmrFI	CCNGG	8 cut(s)	118, 360, 766, 1569, 1974, 1975, 3732, 3756
BmtI	GCTAGC	1 cut(s)	3413
BpiI	GAAGAC	3 cut(s)	776, 1502, 2399
BpmI	CTGGAG	3 cut(s)	3954, 3963, 3983
Bpu10I	CCTNAGC	2 cut(s)	719, 1604
Bpu1102I	GCTNAGC	1 cut(s)	2859
BpuEI	CTTGAG	4 cut(s)	891, 3189, 3680, 3800
BpuMI	CCSGG	5 cut(s)	118, 360, 1974, 1975, 3756
Bsa29I	ATCGAT	1 cut(s)	2915
BsaAI	YACGTR	1 cut(s)	2037
BsaBI	GATNNNNATC	1 cut(s)	1143
BsaI	GGTCTC	2 cut(s)	1664, 3947
BsaJI	CCNNGG	8 cut(s)	1231, 1289, 1568, 1712, 1973, 2797, 2815, 3181
BsaWI	WCCGGW	1 cut(s)	886
BsaXI	ACNNNNNCTCC	4 cut(s)	2350, 2380, 3645, 3675
Bsc4I	CCNNNNNNNGG	7 cut(s)	310, 390, 575, 1338, 1339, 1792, 3241
Bse118I	RCCGGY	1 cut(s)	3113
Bse1I	ACTGG	7 cut(s)	466, 580, 837, 2547, 2575, 3571, 3956
Bse21I	CCTNAGG	1 cut(s)	986
Bse3DI	GCAATG	4 cut(s)	1198, 1841, 2484, 2951
Bse8I	GATNNNNATC	1 cut(s)	1143
BseBI	CCWGG	3 cut(s)	766, 1569, 3732
BseCI	ATCGAT	1 cut(s)	2915
BseDI	CCNNGG	8 cut(s)	1231, 1289, 1568, 1712, 1973, 2797, 2815, 3181
BseGI	GGATG	9 cut(s)	137, 258, 1161, 1348, 1899, 2176, 2215, 2354, 3999
BseJI	GATNNNNATC	1 cut(s)	1143
BseLI	CCNNNNNNNGG	7 cut(s)	310, 390, 575, 1338, 1339, 1792, 3241
BseMI	GCAATG	4 cut(s)	1198, 1841, 2484, 2951
BseMII	CTCAG	7 cut(s)	112, 405, 710, 977, 1464, 2850, 3396
BseNI	ACTGG	7 cut(s)	466, 580, 837, 2547, 2575, 3571, 3956
BseRI	GAGGAG	4 cut(s)	431, 434, 1437, 2358
BseSI	GKGCMC	1 cut(s)	2814
BseYI	CCCAGC	2 cut(s)	1073, 2780
BsgI	GTGCAG	2 cut(s)	1005, 2932
Bsh1236I	CGCG	1 cut(s)	2069
BshFI	GGCC	6 cut(s)	1300, 1331, 2812, 3113, 3180, 3221
BshVI	ATCGAT	1 cut(s)	2915
BsiHKAI	GWGCWC	2 cut(s)	1567, 3121
BsiHKCI	CYCGRG	1 cut(s)	1973
BsiSI	CCGG	6 cut(s)	117, 360, 887, 1974, 3114, 3756
BslFI	GGGAC	5 cut(s)	133, 896, 1090, 2058, 3157
BslI	CCNNNNNNNGG	7 cut(s)	310, 390, 575, 1338, 1339, 1792, 3241
BsmAI	GTCTC	7 cut(s)	859, 964, 1664, 1739, 2397, 3947, 3959
BsmFI	GGGAC	5 cut(s)	133, 896, 1090, 2058, 3157
BsmI	GAATGC	3 cut(s)	437, 1377, 1806
BsnI	GGCC	6 cut(s)	1300, 1331, 2812, 3113, 3180, 3221
Bso31I	GGTCTC	2 cut(s)	1664, 3947
BsoBI	CYCGRG	1 cut(s)	1973
Bsp120I	GGGCCC	1 cut(s)	2810
Bsp1286I	GDGCHC	3 cut(s)	1567, 2814, 3121
Bsp1407I	TGTACA	2 cut(s)	1118, 3661
Bsp1720I	GCTNAGC	1 cut(s)	2859
Bsp19I	CCATGG	1 cut(s)	1289
BspACI	CCGC	8 cut(s)	135, 1847, 1897, 2069, 2790, 3014, 3750, 3923
BspANI	GGCC	6 cut(s)	1300, 1331, 2812, 3113, 3180, 3221
BspCNI	CTCAG	7 cut(s)	111, 406, 711, 978, 1465, 2851, 3397
BspDI	ATCGAT	1 cut(s)	2915
BspFNI	CGCG	1 cut(s)	2069
BspHI	TCATGA	1 cut(s)	3102
BspLI	GGNNCC	9 cut(s)	1446, 2298, 2812, 2813, 3066, 3276, 3369, 3754, 3956
BspMAI	CTGCAG	3 cut(s)	2098, 2494, 3331
BspMI	ACCTGC	2 cut(s)	1222, 1795
BspOI	GCTAGC	1 cut(s)	3413
BspPI	GGATC	6 cut(s)	604, 2685, 2728, 2756, 2920, 3612
BspTI	CTTAAG	1 cut(s)	1526
BspTNI	GGTCTC	2 cut(s)	1664, 3947
BsrDI	GCAATG	4 cut(s)	1198, 1841, 2484, 2951
BsrFI	RCCGGY	1 cut(s)	3113
BsrGI	TGTACA	2 cut(s)	1118, 3661
BsrI	ACTGG	7 cut(s)	466, 580, 837, 2547, 2575, 3571, 3956
BssAI	RCCGGY	1 cut(s)	3113
BssECI	CCNNGG	8 cut(s)	1231, 1289, 1568, 1712, 1973, 2797, 2815, 3181
BssNAI	GTATAC	1 cut(s)	681
BssT1I	CCWWGG	4 cut(s)	1231, 1289, 2815, 3181
Bst1107I	GTATAC	1 cut(s)	681
Bst2UI	CCWGG	3 cut(s)	766, 1569, 3732
Bst4CI	ACNGT	8 cut(s)	163, 524, 554, 882, 1750, 3148, 3455, 3873
Bst6I	CTCTTC	3 cut(s)	312, 1383, 3816
BstAFI	CTTAAG	1 cut(s)	1526
BstAPI	GCANNNNNTGC	1 cut(s)	2093
BstAUI	TGTACA	2 cut(s)	1118, 3661
BstBAI	YACGTR	1 cut(s)	2037
BstDSI	CCRYGG	1 cut(s)	1289
BstENI	CCTNNNNNAGG	1 cut(s)	388
BstF5I	GGATG	9 cut(s)	137, 258, 1161, 1348, 1899, 2176, 2215, 2354, 3999
BstFNI	CGCG	1 cut(s)	2069
BstMAI	GTCTC	7 cut(s)	859, 964, 1664, 1739, 2397, 3947, 3959
BstNI	CCWGG	3 cut(s)	766, 1569, 3732
BstNSI	RCATGY	7 cut(s)	201, 260, 1041, 1865, 1895, 2744, 3790
BstSCI	CCNGG	8 cut(s)	116, 358, 764, 1567, 1972, 1973, 3730, 3754
BstSFI	CTRYAG	7 cut(s)	243, 1665, 2022, 2094, 2322, 2490, 3327
BstSLI	GKGCMC	1 cut(s)	2814
BstUI	CGCG	1 cut(s)	2069
BstV2I	GAAGAC	3 cut(s)	776, 1502, 2399
BstX2I	RGATCY	5 cut(s)	1205, 1266, 2677, 2733, 3604
BstYI	RGATCY	5 cut(s)	1205, 1266, 2677, 2733, 3604
BstZ17I	GTATAC	1 cut(s)	681
Bsu15I	ATCGAT	1 cut(s)	2915
Bsu36I	CCTNAGG	1 cut(s)	986
BsuI	GTATCC	3 cut(s)	894, 2065, 2992
BsuRI	GGCC	6 cut(s)	1300, 1331, 2812, 3113, 3180, 3221
BsuTUI	ATCGAT	1 cut(s)	2915
BtgI	CCRYGG	1 cut(s)	1289
BtgZI	GCGATG	2 cut(s)	1319, 2561
BtrI	CACGTC	1 cut(s)	2029
BtsCI	GGATG	9 cut(s)	137, 258, 1161, 1348, 1899, 2176, 2215, 2354, 3999
BtsI	GCAGTG	2 cut(s)	2944, 3864
BtsIMutI	CAGTG	5 cut(s)	529, 1470, 2243, 2944, 3864
BveI	ACCTGC	2 cut(s)	1222, 1795
CaiI	CAGNNNCTG	2 cut(s)	2128, 2501
CciI	TCATGA	1 cut(s)	3102
Cfr10I	RCCGGY	1 cut(s)	3113
Cfr13I	GGNCC	8 cut(s)	1330, 1783, 1991, 2641, 2810, 2811, 3178, 3752
Cfr9I	CCCGGG	1 cut(s)	1973
ClaI	ATCGAT	1 cut(s)	2915
CseI	GACGC	5 cut(s)	91, 1004, 1529, 3273, 3347
CsiI	ACCWGGT	1 cut(s)	764
Csp6I	GTAC	8 cut(s)	34, 354, 459, 1119, 1761, 1854, 2599, 3662
CspCI	CAANNNNNGTGG	4 cut(s)	2644, 2679, 3058, 3093
CviQI	GTAC	8 cut(s)	34, 354, 459, 1119, 1761, 1854, 2599, 3662
DraI	TTTAAA	2 cut(s)	1143, 1618
DrdI	GACNNNNNNGTC	1 cut(s)	780
DriI	GACNNNNNGTC	1 cut(s)	187
DseDI	GACNNNNNNGTC	1 cut(s)	780
Eam1104I	CTCTTC	3 cut(s)	312, 1383, 3816
Eam1105I	GACNNNNNGTC	1 cut(s)	187
EarI	CTCTTC	3 cut(s)	312, 1383, 3816
Eco130I	CCWWGG	4 cut(s)	1231, 1289, 2815, 3181
Eco147I	AGGCCT	1 cut(s)	1300
Eco24I	GRGCYC	1 cut(s)	2814
Eco31I	GGTCTC	2 cut(s)	1664, 3947
Eco47I	GGWCC	4 cut(s)	1783, 1991, 2641, 3752
Eco57I	CTGAAG	7 cut(s)	293, 530, 770, 1082, 2898, 2924, 3564
Eco72I	CACGTG	1 cut(s)	2037
Eco81I	CCTNAGG	1 cut(s)	986
Eco88I	CYCGRG	1 cut(s)	1973
EcoNI	CCTNNNNNAGG	1 cut(s)	388
EcoO109I	RGGNCCY	2 cut(s)	2810, 2811
EcoRII	CCWGG	3 cut(s)	764, 1567, 3730
EcoT14I	CCWWGG	4 cut(s)	1231, 1289, 2815, 3181
EcoT22I	ATGCAT	2 cut(s)	258, 1423
EcoT38I	GRGCYC	1 cut(s)	2814
ErhI	CCWWGG	4 cut(s)	1231, 1289, 2815, 3181
FalI	AAGNNNNNCTT	8 cut(s)	420, 452, 1509, 1541, 2464, 2496, 2808, 2840
FaqI	GGGAC	5 cut(s)	133, 896, 1090, 2058, 3157
FauI	CCCGC	1 cut(s)	1904
FauNDI	CATATG	3 cut(s)	1689, 2346, 3526
FblI	GTMKAC	1 cut(s)	680
FokI	GGATG	9 cut(s)	144, 265, 1168, 1355, 1886, 2163, 2222, 2341, 4006
FriOI	GRGCYC	1 cut(s)	2814
FspBI	CTAG	8 cut(s)	174, 227, 1125, 1722, 3410, 3671, 3686, 3927
GsaI	CCCAGC	2 cut(s)	1077, 2784
GsuI	CTGGAG	3 cut(s)	3954, 3963, 3983
HaeIII	GGCC	6 cut(s)	1300, 1331, 2812, 3113, 3180, 3221
HapII	CCGG	6 cut(s)	117, 360, 887, 1974, 3114, 3756
HgaI	GACGC	5 cut(s)	91, 1004, 1529, 3273, 3347
HincII	GTYRAC	2 cut(s)	217, 2110
HindII	GTYRAC	2 cut(s)	217, 2110
HindIII	AAGCTT	2 cut(s)	1606, 4049
HinfI	GANTC	9 cut(s)	188, 314, 855, 1916, 2521, 2842, 3001, 3106, 3967
HpaII	CCGG	6 cut(s)	117, 360, 887, 1974, 3114, 3756
HphI	GGTGA	6 cut(s)	399, 3166, 3279, 3581, 3875, 3937
Hpy166II	GTNNAC	7 cut(s)	217, 681, 2110, 2557, 3127, 3133, 3740
Hpy8I	GTNNAC	7 cut(s)	217, 681, 2110, 2557, 3127, 3133, 3740
Hpy99I	CGWCG	2 cut(s)	2009, 4010
HpyCH4III	ACNGT	8 cut(s)	163, 524, 554, 882, 1750, 3148, 3455, 3873
HpyCH4IV	ACGT	9 cut(s)	36, 2028, 2036, 2112, 2701, 2724, 2760, 3129, 3433
HpySE526I	ACGT	9 cut(s)	36, 2028, 2036, 2112, 2701, 2724, 2760, 3129, 3433
MabI	ACCWGGT	1 cut(s)	764
MaeI	CTAG	8 cut(s)	174, 227, 1125, 1722, 3410, 3671, 3686, 3927
MaeII	ACGT	9 cut(s)	36, 2028, 2036, 2112, 2701, 2724, 2760, 3129, 3433
MaeIII	GTNAC	9 cut(s)	839, 876, 1633, 1807, 2032, 2240, 2934, 3154, 3285
MfeI	CAATTG	2 cut(s)	1403, 1995
MflI	RGATCY	5 cut(s)	1205, 1266, 2677, 2733, 3604
MhlI	GDGCHC	3 cut(s)	1567, 2814, 3121
MlyI	GAGTC	4 cut(s)	197, 323, 2995, 3961
MmeI	TCCRAC	5 cut(s)	2572, 2587, 2619, 3582, 3820
Mph1103I	ATGCAT	2 cut(s)	258, 1423
MroXI	GAANNNNTTC	1 cut(s)	14
MslI	CAYNNNNRTG	8 cut(s)	164, 374, 848, 1036, 2039, 2057, 2082, 3165
MspA1I	CMGCKG	3 cut(s)	1060, 1697, 2858
MspCI	CTTAAG	1 cut(s)	1526
MspI	CCGG	6 cut(s)	117, 360, 887, 1974, 3114, 3756
MspR9I	CCNGG	8 cut(s)	118, 360, 766, 1569, 1974, 1975, 3732, 3756
MunI	CAATTG	2 cut(s)	1403, 1995
Mva1269I	GAATGC	3 cut(s)	437, 1377, 1806
MvaI	CCWGG	3 cut(s)	766, 1569, 3732
MvnI	CGCG	1 cut(s)	2069
NciI	CCSGG	5 cut(s)	118, 360, 1974, 1975, 3756
NcoI	CCATGG	1 cut(s)	1289
NdeI	CATATG	3 cut(s)	1689, 2346, 3526
NheI	GCTAGC	1 cut(s)	3409
NlaIV	GGNNCC	9 cut(s)	1446, 2298, 2812, 2813, 3066, 3276, 3369, 3754, 3956
NmuCI	GTSAC	6 cut(s)	1807, 2032, 2240, 2934, 3154, 3285
NsiI	ATGCAT	2 cut(s)	258, 1423
NspI	RCATGY	7 cut(s)	201, 260, 1041, 1865, 1895, 2744, 3790
OliI	CACNNNNGTG	2 cut(s)	848, 2039
PaeI	GCATGC	2 cut(s)	1041, 1865
PagI	TCATGA	1 cut(s)	3102
PceI	AGGCCT	1 cut(s)	1300
PciI	ACATGT	2 cut(s)	197, 2740
PcsI	WCGNNNNNNNCGW	3 cut(s)	135, 2757, 3135
PctI	GAATGC	3 cut(s)	437, 1377, 1806
PdmI	GAANNNNTTC	1 cut(s)	14
PfeI	GAWTC	5 cut(s)	855, 1916, 2521, 2842, 3106
PflFI	GACNNNGTC	1 cut(s)	2030
PflMI	CCANNNNNTGG	1 cut(s)	575
PleI	GAGTC	4 cut(s)	196, 322, 2995, 3961
PmaCI	CACGTG	1 cut(s)	2037
PmlI	CACGTG	1 cut(s)	2037
PpsI	GAGTC	4 cut(s)	196, 322, 2995, 3961
Ppu21I	YACGTR	1 cut(s)	2037
PscI	ACATGT	2 cut(s)	197, 2740
PshBI	ATTAAT	1 cut(s)	2160
PsiI	TTATAA	1 cut(s)	2828
Psp1406I	AACGTT	2 cut(s)	2724, 2760
Psp6I	CCWGG	3 cut(s)	764, 1567, 3730
PspCI	CACGTG	1 cut(s)	2037
PspFI	CCCAGC	2 cut(s)	1073, 2780
PspGI	CCWGG	3 cut(s)	764, 1567, 3730
PspN4I	GGNNCC	9 cut(s)	1446, 2298, 2812, 2813, 3066, 3276, 3369, 3754, 3956
PspOMI	GGGCCC	1 cut(s)	2810
PspPI	GGNCC	8 cut(s)	1330, 1783, 1991, 2641, 2810, 2811, 3178, 3752
PsrI	GAACNNNNNNTAC	2 cut(s)	3048, 3080
PstI	CTGCAG	3 cut(s)	2098, 2494, 3331
PstNI	CAGNNNCTG	2 cut(s)	2128, 2501
PsuI	RGATCY	5 cut(s)	1205, 1266, 2677, 2733, 3604
PsyI	GACNNNGTC	1 cut(s)	2030
PvuII	CAGCTG	3 cut(s)	1060, 1697, 2858
RsaI	GTAC	8 cut(s)	35, 355, 460, 1120, 1762, 1855, 2600, 3663
RsaNI	GTAC	8 cut(s)	34, 354, 459, 1119, 1761, 1854, 2599, 3662
RseI	CAYNNNNRTG	8 cut(s)	164, 374, 848, 1036, 2039, 2057, 2082, 3165
Sau96I	GGNCC	8 cut(s)	1330, 1783, 1991, 2641, 2810, 2811, 3178, 3752
SchI	GAGTC	4 cut(s)	197, 323, 2995, 3961
ScrFI	CCNGG	8 cut(s)	118, 360, 766, 1569, 1974, 1975, 3732, 3756
SduI	GDGCHC	3 cut(s)	1567, 2814, 3121
SexAI	ACCWGGT	1 cut(s)	764
SfcI	CTRYAG	7 cut(s)	243, 1665, 2022, 2094, 2322, 2490, 3327
SinI	GGWCC	4 cut(s)	1783, 1991, 2641, 3752
SmaI	CCCGGG	1 cut(s)	1975
SmiI	ATTTAAAT	1 cut(s)	1143
SmiMI	CAYNNNNRTG	8 cut(s)	164, 374, 848, 1036, 2039, 2057, 2082, 3165
SmlI	CTYRAG	5 cut(s)	906, 1526, 3204, 3695, 3815
SmoI	CTYRAG	5 cut(s)	906, 1526, 3204, 3695, 3815
SphI	GCATGC	2 cut(s)	1041, 1865
SseBI	AGGCCT	1 cut(s)	1300
SsiI	CCGC	8 cut(s)	135, 1847, 1897, 2069, 2790, 3014, 3750, 3923
SspI	AATATT	3 cut(s)	562, 2139, 2631
SspMI	CTAG	8 cut(s)	174, 227, 1125, 1722, 3410, 3671, 3686, 3927
StuI	AGGCCT	1 cut(s)	1300
StyD4I	CCNGG	8 cut(s)	116, 358, 764, 1567, 1972, 1973, 3730, 3754
StyI	CCWWGG	4 cut(s)	1231, 1289, 2815, 3181
SwaI	ATTTAAAT	1 cut(s)	1143
TaaI	ACNGT	8 cut(s)	163, 524, 554, 882, 1750, 3148, 3455, 3873
TaiI	ACGT	9 cut(s)	39, 2031, 2039, 2115, 2704, 2727, 2763, 3132, 3436
TaqI	TCGA	8 cut(s)	90, 374, 858, 1053, 2214, 2524, 2915, 4005
TaqII	GACCGA	1 cut(s)	198
TatI	WGTACW	5 cut(s)	353, 458, 1118, 2598, 3661
TauI	GCSGC	3 cut(s)	138, 1849, 3926
TfiI	GAWTC	5 cut(s)	855, 1916, 2521, 2842, 3106
TscAI	CASTG	5 cut(s)	529, 1477, 2243, 2951, 3864
TseFI	GTSAC	6 cut(s)	1807, 2032, 2240, 2934, 3154, 3285
Tsp45I	GTSAC	6 cut(s)	1807, 2032, 2240, 2934, 3154, 3285
TspGWI	ACGGA	1 cut(s)	860
TspMI	CCCGGG	1 cut(s)	1973
TspRI	CASTG	5 cut(s)	529, 1477, 2243, 2951, 3864
Tth111I	GACNNNGTC	1 cut(s)	2030
Van91I	CCANNNNNTGG	1 cut(s)	575
Vha464I	CTTAAG	1 cut(s)	1526
VpaK11BI	GGWCC	4 cut(s)	1783, 1991, 2641, 3752
VspI	ATTAAT	1 cut(s)	2160
XagI	CCTNNNNNAGG	1 cut(s)	388
XapI	RAATTY	7 cut(s)	445, 811, 1319, 1619, 3074, 3479, 4030
XbaI	TCTAGA	2 cut(s)	1721, 3685
XceI	RCATGY	7 cut(s)	201, 260, 1041, 1865, 1895, 2744, 3790
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2588
XmaI	CCCGGG	1 cut(s)	1973
XmiI	GTMKAC	1 cut(s)	680
XmnI	GAANNNNTTC	1 cut(s)	14
XspI	CTAG	8 cut(s)	174, 227, 1125, 1722, 3410, 3671, 3686, 3927
Zsp2I	ATGCAT	2 cut(s)	258, 1423

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.