Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000068.1

Orthogroup ID

OG0005756

Physical Location & Seq

Genomic Coordinates Forward (+)

138403 .. 151246

Gene Structure 12844 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000068.1_g000026.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1746 bp

atgaagaagcgaaaacgcgaaatcgaagaggactgccgcagcgggaagcgccgccgtatcgaagacgcccccgtcggttctgattactccgttgagatcgagactcataaaggggaaccgctaacaccacgtgggaattcgaagttgaaacgaaagcgtcgtcgtggtcctgcctgttccgaatgtggtcttccctgtagcagagcctataccagatatgtgaagcctcctttaccagagggatatggttaccttccatggtcaatgggcgtggatatgaatggtcactaccatgaagagatttctgatgagattgctttcatgtcttgtgaccgttgtggcaatgctggaaattcgctagacttgtctcttcctgtgcttgagcgtgctatgtttcactcggataatgtctatgagattccaaatgtgagaattgtgggacgagtttgcttcactaatatacccagtaacactgctttccgaggatttggtggtcctcaagggatgattattgctgaaaattggattcaaagaattgccgtagaactgaataaaagcccagaagagataagagagattaattttcaaggtgaaggatcaatattgcattatggtcagaaacttcaacactgtacactggccccgctttggaacgaactaaaactatcttgtgaattttcaaaggctcgcagtgaagtttgccaatttaatactcataatcggtggcggaagcgtggtgtagccatgataccaacgaagtttggcatatcatttacattaaagctcatgaaccaggcaggtgctcttgttcatgtctacacagatggaactgttctagtcacacatggaggagttgagatggggcaaggtttgcacacaaaagttgctcaggtggctgcttctgccttcaatattcctctcagttcagtcttcatatcagagacaagtaccgacaaggttcctaatgcttccccaacagcagcgtctgcaagttctgacatgtatggagctgcagtcttggatgcatgtgagcaaatcaaggcacgtatggaacctattgcttcacagcacaatttcagctcttttgcagagctggcaggtgcatgctatgaggcccggatagatctttctgcccatggattttacattgtacctgaaatcgactttgattggactactggtaaaggcaacccattcaggtactatacctacggggctgcttttgctgaggttgaaattgacactttgactggagatttccacactagggtggcaaatatattcttggatcttggatactctctcaacccagcaattgatgttgggcagatcgaaggagcgtttatacaaggtttgggatgggttgccctagaagaactaaaatggggagatcctgctcataagtggattgcaccaggttccctctacactagtgggcctggaagctacaaaattccttccataaatgacgttcccttaaaattcaatgtttcacttctgaagggacatccaaatgtaaaggccatccactcatctaaagctgttggtgagcccccatttttcttggcatcagctgtcttttttgctatcaaagatgccattatagctgcaagagctgaggtagggtgtaacgagtggtttccacttgataatccagcaacaccagaacgtatacggatggcttgtttggatgaatttaccgcagcatttgctagctcagattttcgcgcaaagcttagtgtttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0000302 GO:0001101 GO:0003674 GO:0003824 GO:0004854 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006139 GO:0006144 GO:0006145 GO:0006725 GO:0006801 GO:0006807 GO:0006950 GO:0006979 GO:0008150 GO:0008152 GO:0009056 GO:0009112 GO:0009115 GO:0009414 GO:0009415 GO:0009628 GO:0009987 GO:0010035 GO:0016491 GO:0016725 GO:0016726 GO:0016903 GO:0019439 GO:0034641 GO:0036094 GO:0042221 GO:0042554 GO:0043167 GO:0043168 GO:0043546 GO:0044237 GO:0044238 GO:0044248 GO:0044270 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046110 GO:0046113 GO:0046483 GO:0046700 GO:0048037 GO:0050660 GO:0050662 GO:0050896 GO:0051536 GO:0051537 GO:0051540 GO:0055086 GO:0055114 GO:0071704 GO:0072521 GO:0072523 GO:0072593 GO:0097159 GO:1901265 GO:1901360 GO:1901361 GO:1901363 GO:1901564 GO:1901565 GO:1901575 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00230 ko00232 ko00983 ko01100 ko01110 ko01120 ko04146 map00230 map00232 map00983 map01100 map01110 map01120 map04146

Pfam Domains

Protein Families

Ald_Xan_dh_C Ald_Xan_dh_C2 CO_deh_flav_C FAD_binding_5 Fer2 Fer2_2

Protein Analysis

581

Amino Acids

64.05

Weight (kDa)

6.48

Isoelectric Point (pI)

45.46

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005756)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G34890 AT4G34900 AT4G34900 AT4G34900
fragaria_vesca	FvH4_3g29000 FvH4_3g29000 FvH4_3g29000 FvH4_3g29000
malus_domestica	MD03G1177200.v1.1 MD11G1161000.v1.1 MD11G1197900.v1.1
prunus_persica	Prupe.4G245700_v2.0.a1 Prupe.4G245700_v2.0.a1
pyrus_communis	pycom11g13410 pycom11g17110 pycom11g17120
rosa_chinensis	RchiOBHm_Chr5g0051661
rosa_laevigata	RLG00000034866
rosa_multiflora	Rmu_sc0000068.1_g000026 Rmu_sc0014882.1_g000001 Rmu_sc0018333.1_g000002
rosa_roxburghii	Rroxscaffold_1G00027170
rosa_rugosa	Rorug05G0277900
rosa_samantha	Rh5AG349700 Rh5BG361400 Rh5CG385900 Rh5DG376200
rosa_wichuraiana	Rw5G033070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	788, 1088
AasI	GACNNNNNNGTC	1 cut(s)	71
Acc36I	ACCTGC	2 cut(s)	788, 1088
AccI	GTMKAC	2 cut(s)	816, 1672
AccII	CGCG	2 cut(s)	18, 1728
AciI	CCGC	7 cut(s)	37, 42, 52, 119, 644, 727, 1701
AclWI	GGATC	3 cut(s)	604, 1296, 1385
AcsI	RAATTY	6 cut(s)	136, 352, 674, 1452, 1481, 1694
AcuI	CTGAAG	1 cut(s)	1520
AcvI	CACGTG	1 cut(s)	131
AcyI	GRCGYC	1 cut(s)	66
AdeI	CACNNNGTG	1 cut(s)	131
AfaI	GTAC	4 cut(s)	634, 949, 1152, 1202
AfiI	CCNNNNNNNGG	2 cut(s)	648, 1267
AflIII	ACRYGT	1 cut(s)	999
AgsI	TTSAA	8 cut(s)	148, 530, 587, 626, 681, 910, 1235, 1486
AhlI	ACTAGT	1 cut(s)	1430
AjnI	CCWGG	3 cut(s)	792, 1414, 1438
AleI	CACNNNNGTG	1 cut(s)	1268
Alw21I	GWGCWC	1 cut(s)	805
Alw26I	GTCTC	3 cut(s)	95, 372, 935
AlwI	GGATC	3 cut(s)	604, 1296, 1385
AlwNI	CAGNNNCTG	1 cut(s)	986
AoxI	GGCC	4 cut(s)	639, 1113, 1436, 1521
ApeKI	GCWGC	7 cut(s)	39, 896, 980, 1010, 1217, 1607, 1703
ApoI	RAATTY	6 cut(s)	136, 352, 674, 1452, 1481, 1694
ArsI	GACNNNNNNTTYG	2 cut(s)	145, 177
AseI	ATTAAT	1 cut(s)	579
AspLEI	GCGC	2 cut(s)	51, 1730
AspS9I	GGNCC	5 cut(s)	167, 494, 640, 1114, 1436
AsuC2I	CCSGG	1 cut(s)	1117
AsuHPI	GGTGA	2 cut(s)	602, 1559
AsuII	TTCGAA	1 cut(s)	140
AsuNHI	GCTAGC	1 cut(s)	1712
AvaII	GGWCC	2 cut(s)	167, 494
BanII	GRGCYC	1 cut(s)	1554
BbrPI	CACGTG	1 cut(s)	131
BbsI	GAAGAC	3 cut(s)	69, 182, 922
Bbv12I	GWGCWC	1 cut(s)	805
BbvCI	CCTCAGC	2 cut(s)	1227, 1617
BbvI	GCAGC	7 cut(s)	51, 883, 992, 997, 1204, 1594, 1715
BccI	CCATC	5 cut(s)	818, 853, 1353, 1532, 1672
BceAI	ACGGC	2 cut(s)	39, 524
BciT130I	CCWGG	3 cut(s)	794, 1416, 1440
BciVI	GTATCC	1 cut(s)	1289
BcnI	CCSGG	1 cut(s)	1117
BcoDI	GTCTC	3 cut(s)	95, 372, 935
BcuI	ACTAGT	1 cut(s)	1430
BfaI	CTAG	6 cut(s)	359, 836, 1266, 1370, 1431, 1713
BfmI	CTRYAG	2 cut(s)	196, 1011
BfoI	RGCGCY	1 cut(s)	52
BfuAI	ACCTGC	2 cut(s)	788, 1088
BfuI	GTATCC	1 cut(s)	1289
BglII	AGATCT	1 cut(s)	1123
BisI	GCNGC	9 cut(s)	37, 40, 52, 897, 981, 1011, 1218, 1608, 1704
BlsI	GCNGC	9 cut(s)	38, 41, 53, 898, 982, 1012, 1219, 1609, 1705
Bme1390I	CCNGG	4 cut(s)	794, 1117, 1416, 1440
Bme18I	GGWCC	2 cut(s)	167, 494
BmgT120I	GGNCC	5 cut(s)	167, 494, 640, 1114, 1436
BmiI	GGNNCC	5 cut(s)	117, 642, 960, 1053, 1420
BmrFI	CCNGG	4 cut(s)	794, 1117, 1416, 1440
BmrI	ACTGGG	1 cut(s)	459
BmsI	GCATC	3 cut(s)	1012, 1577, 1585
BmtI	GCTAGC	1 cut(s)	1716
BmuI	ACTGGG	1 cut(s)	459
BpiI	GAAGAC	3 cut(s)	69, 182, 922
BpmI	CTGGAG	1 cut(s)	1272
Bpu10I	CCTNAGC	3 cut(s)	888, 1227, 1617
Bpu14I	TTCGAA	1 cut(s)	140
BpuEI	CTTGAG	2 cut(s)	401, 483
BpuMI	CCSGG	1 cut(s)	1117
BsaAI	YACGTR	2 cut(s)	131, 1046
BsaHI	GRCGYC	1 cut(s)	66
BsaJI	CCNNGG	3 cut(s)	257, 481, 1135
BsaXI	ACNNNNNCTCC	2 cut(s)	999, 1029
Bsc4I	CCNNNNNNNGG	2 cut(s)	648, 1267
Bse1I	ACTGG	4 cut(s)	465, 642, 1183, 1255
Bse3DI	GCAATG	1 cut(s)	349
BseBI	CCWGG	3 cut(s)	794, 1416, 1440
BseDI	CCNNGG	3 cut(s)	257, 481, 1135
BseGI	GGATG	7 cut(s)	510, 1027, 1364, 1507, 1524, 1683, 1696
BseLI	CCNNNNNNNGG	2 cut(s)	648, 1267
BseMI	GCAATG	1 cut(s)	349
BseMII	CTCAG	5 cut(s)	902, 934, 1218, 1608, 1731
BseNI	ACTGG	4 cut(s)	465, 642, 1183, 1255
BseRI	GAGGAG	1 cut(s)	864
BseXI	GCAGC	7 cut(s)	51, 883, 992, 997, 1204, 1594, 1715
BseYI	CCCAGC	1 cut(s)	1309
Bsh1236I	CGCG	2 cut(s)	18, 1728
BshFI	GGCC	4 cut(s)	641, 1115, 1438, 1523
BsiHKAI	GWGCWC	1 cut(s)	805
BsiSI	CCGG	1 cut(s)	1117
BslFI	GGGAC	2 cut(s)	453, 1518
BslI	CCNNNNNNNGG	2 cut(s)	648, 1267
BsmAI	GTCTC	3 cut(s)	95, 372, 935
BsmFI	GGGAC	2 cut(s)	453, 1518
BsnI	GGCC	4 cut(s)	641, 1115, 1438, 1523
Bsp119I	TTCGAA	1 cut(s)	140
Bsp1286I	GDGCHC	2 cut(s)	805, 1554
Bsp1407I	TGTACA	1 cut(s)	632
Bsp143I	GATC	6 cut(s)	96, 596, 1123, 1288, 1329, 1390
Bsp19I	CCATGG	2 cut(s)	257, 1135
BspACI	CCGC	7 cut(s)	37, 42, 52, 119, 644, 727, 1701
BspANI	GGCC	4 cut(s)	641, 1115, 1438, 1523
BspCNI	CTCAG	5 cut(s)	901, 933, 1219, 1609, 1730
BspFNI	CGCG	2 cut(s)	18, 1728
BspHI	TCATGA	1 cut(s)	786
BspLI	GGNNCC	5 cut(s)	117, 642, 960, 1053, 1420
BspMAI	CTGCAG	1 cut(s)	1015
BspMI	ACCTGC	2 cut(s)	788, 1088
BspOI	GCTAGC	1 cut(s)	1716
BspPI	GGATC	3 cut(s)	604, 1296, 1385
BspT104I	TTCGAA	1 cut(s)	140
BsrDI	GCAATG	1 cut(s)	349
BsrGI	TGTACA	1 cut(s)	632
BsrI	ACTGG	4 cut(s)	465, 642, 1183, 1255
BssECI	CCNNGG	3 cut(s)	257, 481, 1135
BssMI	GATC	6 cut(s)	96, 596, 1123, 1288, 1329, 1390
BssNAI	GTATAC	1 cut(s)	1673
BssNI	GRCGYC	1 cut(s)	66
BssT1I	CCWWGG	2 cut(s)	257, 1135
Bst1107I	GTATAC	1 cut(s)	1673
Bst2UI	CCWGG	3 cut(s)	794, 1416, 1440
Bst4CI	ACNGT	3 cut(s)	335, 632, 832
Bst6I	CTCTTC	4 cut(s)	21, 291, 375, 558
BstACI	GRCGYC	1 cut(s)	66
BstAPI	GCANNNNNTGC	3 cut(s)	871, 986, 1709
BstAUI	TGTACA	1 cut(s)	632
BstBAI	YACGTR	2 cut(s)	131, 1046
BstBI	TTCGAA	1 cut(s)	140
BstC8I	GCNNGC	5 cut(s)	387, 688, 1095, 1105, 1714
BstDEI	CTNAG	6 cut(s)	888, 920, 1227, 1617, 1717, 1736
BstDSI	CCRYGG	2 cut(s)	257, 1135
BstEII	GGTNACC	1 cut(s)	248
BstF5I	GGATG	7 cut(s)	510, 1027, 1364, 1507, 1524, 1683, 1696
BstFNI	CGCG	2 cut(s)	18, 1728
BstH2I	RGCGCY	1 cut(s)	52
BstHHI	GCGC	2 cut(s)	51, 1730
BstKTI	GATC	6 cut(s)	99, 599, 1126, 1291, 1332, 1393
BstMAI	GTCTC	3 cut(s)	95, 372, 935
BstMBI	GATC	6 cut(s)	96, 596, 1123, 1288, 1329, 1390
BstNI	CCWGG	3 cut(s)	794, 1416, 1440
BstNSI	RCATGY	3 cut(s)	1003, 1029, 1107
BstPI	GGTNACC	1 cut(s)	248
BstSCI	CCNGG	4 cut(s)	792, 1115, 1414, 1438
BstSFI	CTRYAG	2 cut(s)	196, 1011
BstUI	CGCG	2 cut(s)	18, 1728
BstV1I	GCAGC	7 cut(s)	51, 883, 992, 997, 1204, 1594, 1715
BstV2I	GAAGAC	3 cut(s)	69, 182, 922
BstX2I	RGATCY	3 cut(s)	1123, 1288, 1390
BstYI	RGATCY	3 cut(s)	1123, 1288, 1390
BstZ17I	GTATAC	1 cut(s)	1673
BsuI	GTATCC	1 cut(s)	1289
BsuRI	GGCC	4 cut(s)	641, 1115, 1438, 1523
BtgI	CCRYGG	2 cut(s)	257, 1135
BtsCI	GGATG	7 cut(s)	510, 1027, 1364, 1507, 1524, 1683, 1696
BtsI	GCAGTG	2 cut(s)	471, 697
BtsIMutI	CAGTG	4 cut(s)	471, 628, 635, 697
BveI	ACCTGC	2 cut(s)	788, 1088
Cac8I	GCNNGC	5 cut(s)	387, 688, 1095, 1105, 1714
CaiI	CAGNNNCTG	1 cut(s)	986
CciI	TCATGA	1 cut(s)	786
CfoI	GCGC	2 cut(s)	51, 1730
Cfr13I	GGNCC	5 cut(s)	167, 494, 640, 1114, 1436
CseI	GACGC	3 cut(s)	74, 146, 972
CsiI	ACCWGGT	1 cut(s)	1414
Csp6I	GTAC	4 cut(s)	633, 948, 1151, 1201
CspCI	CAANNNNNGTGG	2 cut(s)	252, 287
CviQI	GTAC	4 cut(s)	633, 948, 1151, 1201
DdeI	CTNAG	6 cut(s)	888, 920, 1227, 1617, 1717, 1736
DpnI	GATC	6 cut(s)	98, 598, 1125, 1290, 1331, 1392
DpnII	GATC	6 cut(s)	96, 596, 1123, 1288, 1329, 1390
DraIII	CACNNNGTG	1 cut(s)	131
DrdI	GACNNNNNNGTC	1 cut(s)	71
DseDI	GACNNNNNNGTC	1 cut(s)	71
Eam1104I	CTCTTC	4 cut(s)	21, 291, 375, 558
EarI	CTCTTC	4 cut(s)	21, 291, 375, 558
EciI	GGCGGA	1 cut(s)	742
Eco130I	CCWWGG	2 cut(s)	257, 1135
Eco24I	GRGCYC	1 cut(s)	1554
Eco47I	GGWCC	2 cut(s)	167, 494
Eco57I	CTGAAG	1 cut(s)	1520
Eco72I	CACGTG	1 cut(s)	131
Eco91I	GGTNACC	1 cut(s)	248
EcoO65I	GGTNACC	1 cut(s)	248
EcoRI	GAATTC	1 cut(s)	136
EcoRII	CCWGG	3 cut(s)	792, 1414, 1438
EcoT14I	CCWWGG	2 cut(s)	257, 1135
EcoT22I	ATGCAT	1 cut(s)	1027
EcoT38I	GRGCYC	1 cut(s)	1554
ErhI	CCWWGG	2 cut(s)	257, 1135
FaqI	GGGAC	2 cut(s)	453, 1518
FauI	CCCGC	2 cut(s)	35, 651
FblI	GTMKAC	2 cut(s)	816, 1672
Fnu4HI	GCNGC	9 cut(s)	37, 40, 52, 897, 981, 1011, 1218, 1608, 1704
FokI	GGATG	7 cut(s)	517, 1034, 1371, 1494, 1511, 1690, 1703
FriOI	GRGCYC	1 cut(s)	1554
Fsp4HI	GCNGC	9 cut(s)	37, 40, 52, 897, 981, 1011, 1218, 1608, 1704
FspBI	CTAG	6 cut(s)	359, 836, 1266, 1370, 1431, 1713
GlaI	GCGC	2 cut(s)	50, 1729
GluI	GCNGC	9 cut(s)	37, 40, 52, 897, 981, 1011, 1218, 1608, 1704
GsaI	CCCAGC	1 cut(s)	1313
GsuI	CTGGAG	1 cut(s)	1272
HaeII	RGCGCY	1 cut(s)	52
HaeIII	GGCC	4 cut(s)	641, 1115, 1438, 1523
HapII	CCGG	1 cut(s)	1117
HgaI	GACGC	3 cut(s)	74, 146, 972
HhaI	GCGC	2 cut(s)	51, 1730
Hin1I	GRCGYC	1 cut(s)	66
Hin6I	GCGC	2 cut(s)	49, 1728
HinP1I	GCGC	2 cut(s)	49, 1728
HindIII	AAGCTT	1 cut(s)	1733
HinfI	GANTC	3 cut(s)	103, 418, 526
HpaII	CCGG	1 cut(s)	1117
HphI	GGTGA	2 cut(s)	602, 1559
Hpy166II	GTNNAC	3 cut(s)	635, 817, 1673
Hpy188III	TCNNGA	2 cut(s)	100, 787
Hpy8I	GTNNAC	3 cut(s)	635, 817, 1673
Hpy99I	CGWCG	3 cut(s)	77, 162, 165
HpyAV	CCTTC	6 cut(s)	263, 587, 916, 1328, 1467, 1495
HpyCH4III	ACNGT	3 cut(s)	335, 632, 832
HpyCH4IV	ACGT	4 cut(s)	130, 1045, 1470, 1669
HpyCH4V	TGCA	9 cut(s)	607, 874, 989, 1013, 1025, 1088, 1103, 1412, 1610
HpyF3I	CTNAG	6 cut(s)	888, 920, 1227, 1617, 1717, 1736
HpySE526I	ACGT	4 cut(s)	130, 1045, 1470, 1669
Hsp92I	GRCGYC	1 cut(s)	66
HspAI	GCGC	2 cut(s)	49, 1728
Kzo9I	GATC	6 cut(s)	96, 596, 1123, 1288, 1329, 1390
LmnI	GCTCC	2 cut(s)	1007, 1337
Lsp1109I	GCAGC	7 cut(s)	51, 883, 992, 997, 1204, 1594, 1715
LweI	GCATC	3 cut(s)	1012, 1577, 1585
MabI	ACCWGGT	1 cut(s)	1414
MaeI	CTAG	6 cut(s)	359, 836, 1266, 1370, 1431, 1713
MaeII	ACGT	4 cut(s)	130, 1045, 1470, 1669
MaeIII	GTNAC	6 cut(s)	248, 284, 329, 467, 838, 1628
MalI	GATC	6 cut(s)	98, 598, 1125, 1290, 1331, 1392
MboI	GATC	6 cut(s)	96, 596, 1123, 1288, 1329, 1390
MboII	GAAGA	9 cut(s)	16, 38, 74, 182, 308, 362, 575, 922, 1385
MfeI	CAATTG	1 cut(s)	1314
MflI	RGATCY	3 cut(s)	1123, 1288, 1390
MhlI	GDGCHC	2 cut(s)	805, 1554
MlyI	GAGTC	1 cut(s)	97
Mph1103I	ATGCAT	1 cut(s)	1027
MseI	TTAA	4 cut(s)	579, 708, 779, 1478
MslI	CAYNNNNRTG	3 cut(s)	291, 1268, 1512
MspA1I	CMGCKG	2 cut(s)	42, 1574
MspI	CCGG	1 cut(s)	1117
MspR9I	CCNGG	4 cut(s)	794, 1117, 1416, 1440
MunI	CAATTG	1 cut(s)	1314
MvaI	CCWGG	3 cut(s)	794, 1416, 1440
MvnI	CGCG	2 cut(s)	18, 1728
NciI	CCSGG	1 cut(s)	1117
NcoI	CCATGG	2 cut(s)	257, 1135
NdeII	GATC	6 cut(s)	96, 596, 1123, 1288, 1329, 1390
NheI	GCTAGC	1 cut(s)	1712
NlaIV	GGNNCC	5 cut(s)	117, 642, 960, 1053, 1420
NmuCI	GTSAC	3 cut(s)	284, 329, 838
NsiI	ATGCAT	1 cut(s)	1027
NspI	RCATGY	3 cut(s)	1003, 1029, 1107
NspV	TTCGAA	1 cut(s)	140
OliI	CACNNNNGTG	1 cut(s)	1268
PaeI	GCATGC	1 cut(s)	1107
PagI	TCATGA	1 cut(s)	786
PaqCI	CACCTGC	2 cut(s)	788, 1088
PciI	ACATGT	1 cut(s)	999
PcsI	WCGNNNNNNNCGW	1 cut(s)	157
PfeI	GAWTC	2 cut(s)	418, 526
PkrI	GCNGC	9 cut(s)	38, 41, 53, 898, 982, 1012, 1219, 1609, 1705
PleI	GAGTC	1 cut(s)	97
PmaCI	CACGTG	1 cut(s)	131
PmlI	CACGTG	1 cut(s)	131
PpsI	GAGTC	1 cut(s)	97
Ppu21I	YACGTR	2 cut(s)	131, 1046
PscI	ACATGT	1 cut(s)	999
PshBI	ATTAAT	1 cut(s)	579
Psp6I	CCWGG	3 cut(s)	792, 1414, 1438
PspCI	CACGTG	1 cut(s)	131
PspEI	GGTNACC	1 cut(s)	248
PspFI	CCCAGC	1 cut(s)	1309
PspGI	CCWGG	3 cut(s)	792, 1414, 1438
PspN4I	GGNNCC	5 cut(s)	117, 642, 960, 1053, 1420
PspPI	GGNCC	5 cut(s)	167, 494, 640, 1114, 1436
PstI	CTGCAG	1 cut(s)	1015
PstNI	CAGNNNCTG	1 cut(s)	986
PsuI	RGATCY	3 cut(s)	1123, 1288, 1390
PvuII	CAGCTG	1 cut(s)	1574
RsaI	GTAC	4 cut(s)	634, 949, 1152, 1202
RsaNI	GTAC	4 cut(s)	633, 948, 1151, 1201
RseI	CAYNNNNRTG	3 cut(s)	291, 1268, 1512
SaqAI	TTAA	4 cut(s)	579, 708, 779, 1478
SatI	GCNGC	9 cut(s)	37, 40, 52, 897, 981, 1011, 1218, 1608, 1704
Sau3AI	GATC	6 cut(s)	96, 596, 1123, 1288, 1329, 1390
Sau96I	GGNCC	5 cut(s)	167, 494, 640, 1114, 1436
SchI	GAGTC	1 cut(s)	97
ScrFI	CCNGG	4 cut(s)	794, 1117, 1416, 1440
SduI	GDGCHC	2 cut(s)	805, 1554
SexAI	ACCWGGT	1 cut(s)	1414
SfaNI	GCATC	3 cut(s)	1012, 1577, 1585
SfcI	CTRYAG	2 cut(s)	196, 1011
SfuI	TTCGAA	1 cut(s)	140
SinI	GGWCC	2 cut(s)	167, 494
SmiMI	CAYNNNNRTG	3 cut(s)	291, 1268, 1512
SmlI	CTYRAG	2 cut(s)	380, 498
SmoI	CTYRAG	2 cut(s)	380, 498
SpeI	ACTAGT	1 cut(s)	1430
SphI	GCATGC	1 cut(s)	1107
SsiI	CCGC	7 cut(s)	37, 42, 52, 119, 644, 727, 1701
SspI	AATATT	2 cut(s)	603, 913
SspMI	CTAG	6 cut(s)	359, 836, 1266, 1370, 1431, 1713
StyD4I	CCNGG	4 cut(s)	792, 1115, 1414, 1438
StyI	CCWWGG	2 cut(s)	257, 1135
TaaI	ACNGT	3 cut(s)	335, 632, 832
TaiI	ACGT	4 cut(s)	133, 1048, 1473, 1672
TaqI	TCGA	6 cut(s)	24, 60, 99, 140, 1161, 1332
TatI	WGTACW	1 cut(s)	632
TauI	GCSGC	2 cut(s)	39, 54
TfiI	GAWTC	2 cut(s)	418, 526
Tru1I	TTAA	4 cut(s)	579, 708, 779, 1478
Tru9I	TTAA	4 cut(s)	579, 708, 779, 1478
TscAI	CASTG	4 cut(s)	478, 635, 642, 697
TseFI	GTSAC	3 cut(s)	284, 329, 838
TseI	GCWGC	7 cut(s)	39, 896, 980, 1010, 1217, 1607, 1703
Tsp45I	GTSAC	3 cut(s)	284, 329, 838
TspDTI	ATGAA	8 cut(s)	17, 293, 309, 310, 800, 803, 922, 1707
TspGWI	ACGGA	2 cut(s)	79, 1690
TspRI	CASTG	4 cut(s)	478, 635, 642, 697
VpaK11BI	GGWCC	2 cut(s)	167, 494
VspI	ATTAAT	1 cut(s)	579
XapI	RAATTY	6 cut(s)	136, 352, 674, 1452, 1481, 1694
XceI	RCATGY	3 cut(s)	1003, 1029, 1107
XmiI	GTMKAC	2 cut(s)	816, 1672
XspI	CTAG	6 cut(s)	359, 836, 1266, 1370, 1431, 1713
Zsp2I	ATGCAT	1 cut(s)	1027

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.