Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0018333.1

Orthogroup ID

OG0005756

Physical Location & Seq

Genomic Coordinates Forward (+)

1796 .. 10444

Gene Structure 8649 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0018333.1_g000002.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3474 bp

atggggtcgttgaagagcgaagaggaggccggggaggactcgaacgaggccatattgtatgttaatggaattcgtcgagtcttgcctgatggattggctcacctcaccctccttgagtacctcagagacataggtctcacggggacaaagcttggttgcggtgaaggtggttgtggtgcgtgtactgtaatggtttcgcattatgaccaaaaactgaagaaatgcctgcactacgccgttaatgcatgcttggctccactgtattctttagaagggatgcatgtaattacagtggaaggacttgggaaccataaacaaggcctgcacccaattcaagaatcattggcacaatctcatggctcacaatgtggattttgcaccccgggttttatcatgtccgtctatgcattattaaggtcaagtcagaccccacctaatgaggagcagattgaagaatgtttagcaggaaacttgtgtcgatgcactggttacagaccaattgttgatgcttttcgtgtctttgccaaaacagatgataaaccgtacattgacatatcatctctaagtcttgaaggaggtgaatttgtgtgcccttcaactggtaaaccctgttcgtgtggattaaaaagtgagatatcaagcaaccgtcacaaaatgggtacttgtgacgagaggtatgcacctgtatcgtatagtgaaattgatggaagcacatacacggacaaggaacttatatttcctcctgagctcatgttgagaaaatcaacttatttacatttgaatggattcagtgggttaaagtggttcagacccttgagacttaagcaagtactagagttaaaagaaaaattcccagatgcaaagttattagtaggtaatactgaggtaggaattgaaatgaggttgaaaaaaattcaatatcgggttttaatttctgtcacacatgtacctgaacttagtatactgaatctgaaggatgatggactagagataggttctgcggtaagactttctgaactacttaaattcttaagaaaggtcataacagaacgtgcagctcatgaaacttcttcctgtaaggcttttgttgaacaattaaaatggtttgctgggatgcaaataagaaatgttgcttgtgtgggtggaaatatctgtacagccagtccaatttcagacttgaaccccctttggatggctgccagagcaacttttcgaattgttgattccaaagggaacattagaacgacgccggcagaaaagtttttccttggttaccgtaaggtggatctgggaagtggtgaaattctactttctgtatttttaccttggactaggccgtttgagtatgtgaaagaatataaacaagctcacagaagggatgatgatattgcaattgtgaatgctggaattcgtgttcatcttgaggaaagaggtgaaaacattgtagtttctgatgcatctattgtttatgggggtgtagctccactctctctttctgcaacaagaacaaaagactttctcactggaaacagttggaaccaggagctattgcagggtgctctgaaaatcatccagaaggatgtattgcttggagacaatgctcctggtgggatggtggagtttcgtaagtctttgacacttagctttttcttcaagttttttctgtgggtttctcatcagctggaaagggaaaaaggccttaaggggagtgtaccattgtctcatctttctgctatacaaccatttgacaggccatctgttataggaactcaagactatgaaattacaaaacatgggacagctgttgggtctcctgaggttcatctatcatcgaaacttcaggtttcaggagaggcagaatatgctgatgatacaccattgcctcccaatggcttgcacgccgcgttaatattgagcaaaaaacctcatgctcgtatactttcaattgatgattcaggagcaaagttatcgcctgggtttgcaggcatattttttgccaaggatgttccagctgataataaagttggacccgttgttgttgacgaggaactatttgcttcagagtttgtcacttgtgtaggtcaggttataggagtggtagttgcagatacacatgaaaaggcaaaattagcagcaatgaaagttcacgttgagtatgaagagctcccagccatcttatcgatacaggatgccatcaatgctaatagtttccatcctaatactgagaggcgttttaggaaaggagatgtggatctttgctttcaatcatgtcaatgtgacaaggtcatagagggggaagttctagtgggaggccaggaacacttctatttggagccacagagcagtgtgatatggacaatggatggtggcaatgaagttcatatgatctcatccactcaagctcctcagaagcaccagaagtatgtttctcatgttcttggtcttccaatgtcaaaagtaatttgtaaaacgaagcgtattggcggcggttttggcggcaaggagacaagatcagctttcattgctgctgcagcttctgttccttcatatctattgaatcgaccagtcaaaattacattagaccgtgatacggacatgatgataactgggcagcgccatagctttcttggaaaatacaaggtgggctttacaaatgagggaaaggtgttggcattggatcttctcatctataatggtgctggaaattcgctagacttgtctcttcctgtgcttgagcgtgctatgtttcactcggataatgtctatgagattccaaatgtgagaattgtgggacgagtttgcttcactaatatacccagtaacactgctttccgaggatttggtggtcctcaagggatgattattgctgaaaattggattcaaagaattgccgtagaactgaataaaagcccagaagagataagagagattaattttcaaggtgaaggatcaatattgcattatggtcagaaacttcaacactgtacactggccccgctttggaacgaactaaaactatcttgtgaattttcaaaggctcgcagtgaagtttgccaatttaatactcataatcggtggcggaagcgtggtgtagccatgataccaacgaagtttggcatatcatttacattaaagctcatgaaccaggcaggtgctcttgttcatgtctacacagatggaactgttctagtcacacatggaggagttgagatggggcaaggtttgcacacaaaagttgctcaggtggctgcttctgccttcaatattcctctcagttcagtcttcatatcagagacaagtaccgacaaggttcctaatgcttccccaacagcagcgtctgcaagttctgacatgtatggagctgcagtcttggatgcatgtgagcaaatcaaggcacgtatggaacctattgcttcacagcacaatttcagctcttttgcagaggtactgactctcttttatcatggtttatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0000302 GO:0001101 GO:0003674 GO:0003824 GO:0004854 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006139 GO:0006144 GO:0006145 GO:0006725 GO:0006801 GO:0006807 GO:0006950 GO:0006979 GO:0008150 GO:0008152 GO:0009056 GO:0009112 GO:0009115 GO:0009414 GO:0009415 GO:0009628 GO:0009987 GO:0010035 GO:0016491 GO:0016725 GO:0016726 GO:0016903 GO:0019439 GO:0034641 GO:0036094 GO:0042221 GO:0042554 GO:0043167 GO:0043168 GO:0043546 GO:0044237 GO:0044238 GO:0044248 GO:0044270 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046110 GO:0046113 GO:0046483 GO:0046700 GO:0048037 GO:0050660 GO:0050662 GO:0050896 GO:0051536 GO:0051537 GO:0051540 GO:0055086 GO:0055114 GO:0071704 GO:0072521 GO:0072523 GO:0072593 GO:0097159 GO:1901265 GO:1901360 GO:1901361 GO:1901363 GO:1901564 GO:1901565 GO:1901575 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00230 ko00232 ko00983 ko01100 ko01110 ko01120 ko04146 map00230 map00232 map00983 map01100 map01110 map01120 map04146

Pfam Domains

Protein Families

Ald_Xan_dh_C Ald_Xan_dh_C2 CO_deh_flav_C FAD_binding_5 Fer2 Fer2_2

Protein Analysis

1157

Amino Acids

127.12

Weight (kDa)

6.68

Isoelectric Point (pI)

40.05

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005756)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G34890 AT4G34900 AT4G34900 AT4G34900
fragaria_vesca	FvH4_3g29000 FvH4_3g29000 FvH4_3g29000 FvH4_3g29000
malus_domestica	MD03G1177200.v1.1 MD11G1161000.v1.1 MD11G1197900.v1.1
prunus_persica	Prupe.4G245700_v2.0.a1 Prupe.4G245700_v2.0.a1
pyrus_communis	pycom11g13410 pycom11g17110 pycom11g17120
rosa_chinensis	RchiOBHm_Chr5g0051661
rosa_laevigata	RLG00000034866
rosa_multiflora	Rmu_sc0000068.1_g000026 Rmu_sc0014882.1_g000001 Rmu_sc0018333.1_g000002
rosa_roxburghii	Rroxscaffold_1G00027170
rosa_rugosa	Rorug05G0277900
rosa_samantha	Rh5AG349700 Rh5BG361400 Rh5CG385900 Rh5DG376200
rosa_wichuraiana	Rw5G033070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	3140
Acc36I	ACCTGC	1 cut(s)	3140
AccI	GTMKAC	3 cut(s)	961, 1936, 3168
AccII	CGCG	1 cut(s)	1904
AciI	CCGC	8 cut(s)	159, 1001, 1902, 2484, 2487, 2496, 2996, 3079
AclWI	GGATC	4 cut(s)	1293, 2259, 2685, 2956
AcsI	RAATTY	9 cut(s)	69, 581, 848, 912, 1025, 1302, 1407, 2704, 3026
AcuI	CTGAAG	4 cut(s)	236, 992, 1823, 2043
AcyI	GRCGYC	1 cut(s)	1247
AdeI	CACNNNGTG	1 cut(s)	368
AfiI	CCNNNNNNNGG	6 cut(s)	599, 1192, 1282, 1889, 2590, 3000
AflII	CTTAAG	3 cut(s)	821, 1030, 1700
AflIII	ACRYGT	2 cut(s)	943, 3351
AjnI	CCWGG	5 cut(s)	1539, 1603, 1972, 2313, 3144
AloI	GAACNNNNNNTCC	2 cut(s)	1398, 1430
Alw21I	GWGCWC	4 cut(s)	750, 1561, 2166, 3157
Alw26I	GTCTC	9 cut(s)	120, 140, 811, 1587, 1725, 1815, 2498, 2724, 3287
AlwI	GGATC	4 cut(s)	1293, 2259, 2685, 2956
AlwNI	CAGNNNCTG	2 cut(s)	2537, 3338
Ama87I	CYCGRG	1 cut(s)	382
AoxI	GGCC	8 cut(s)	27, 48, 319, 1334, 1696, 1751, 2311, 2991
ApoI	RAATTY	9 cut(s)	69, 581, 848, 912, 1025, 1302, 1407, 2704, 3026
AseI	ATTAAT	1 cut(s)	2931
Asp700I	GAANNNNTTC	1 cut(s)	785
AspLEI	GCGC	1 cut(s)	2616
AspS9I	GGNCC	3 cut(s)	2027, 2846, 2992
AsuC2I	CCSGG	3 cut(s)	31, 383, 384
AsuHPI	GGTGA	7 cut(s)	92, 97, 173, 590, 1310, 1445, 2954
AsuII	TTCGAA	1 cut(s)	1213
AvaI	CYCGRG	1 cut(s)	382
AvaII	GGWCC	2 cut(s)	2027, 2846
AxyI	CCTNAGG	1 cut(s)	1815
BaeGI	GKGCMC	1 cut(s)	593
BaeI	ACNNNNGTAYC	2 cut(s)	930, 963
BanII	GRGCYC	2 cut(s)	750, 2166
BbsI	GAAGAC	2 cut(s)	2435, 3274
Bbv12I	GWGCWC	4 cut(s)	750, 1561, 2166, 3157
BceAI	ACGGC	3 cut(s)	221, 1321, 2876
BcgI	CGANNNNNNTGC	6 cut(s)	659, 669, 693, 703, 1950, 1984
BciT130I	CCWGG	5 cut(s)	1541, 1605, 1974, 2315, 3146
BcnI	CCSGG	3 cut(s)	31, 383, 384
BcoDI	GTCTC	9 cut(s)	120, 140, 811, 1587, 1725, 1815, 2498, 2724, 3287
BfaI	CTAG	6 cut(s)	833, 986, 1332, 2303, 2711, 3188
BfmI	CTRYAG	2 cut(s)	2529, 3363
BfoI	RGCGCY	1 cut(s)	2617
BfrI	CTTAAG	3 cut(s)	821, 1030, 1700
BfuAI	ACCTGC	1 cut(s)	3140
BmcAI	AGTACT	1 cut(s)	831
Bme1390I	CCNGG	8 cut(s)	31, 383, 384, 1541, 1605, 1974, 2315, 3146
Bme18I	GGWCC	2 cut(s)	2027, 2846
BmeT110I	CYCGRG	1 cut(s)	382
BmgT120I	GGNCC	3 cut(s)	2027, 2846, 2992
BmiI	GGNNCC	8 cut(s)	255, 308, 1538, 2029, 2334, 2994, 3312, 3405
BmrFI	CCNGG	8 cut(s)	31, 383, 384, 1541, 1605, 1974, 2315, 3146
BmrI	ACTGGG	2 cut(s)	2616, 2811
BmsI	GCATC	9 cut(s)	267, 470, 496, 847, 1104, 1444, 1466, 2179, 3364
BmuI	ACTGGG	2 cut(s)	2616, 2811
BoxI	GACNNNNGTC	1 cut(s)	132
BpiI	GAAGAC	2 cut(s)	2435, 3274
Bpu10I	CCTNAGC	2 cut(s)	744, 3240
Bpu14I	TTCGAA	1 cut(s)	1213
BpuEI	CTTGAG	7 cut(s)	134, 835, 1442, 1755, 2382, 2753, 2835
BpuMI	CCSGG	3 cut(s)	31, 383, 384
Bsa29I	ATCGAT	1 cut(s)	2180
BsaAI	YACGTR	1 cut(s)	3398
BsaBI	GATNNNNATC	1 cut(s)	2250
BsaHI	GRCGYC	1 cut(s)	1247
BsaI	GGTCTC	2 cut(s)	140, 1815
BsaJI	CCNNGG	8 cut(s)	30, 381, 382, 1267, 1325, 1973, 1998, 2833
BsaXI	ACNNNNNCTCC	6 cut(s)	2085, 2115, 2386, 2416, 3351, 3381
Bsc4I	CCNNNNNNNGG	6 cut(s)	599, 1192, 1282, 1889, 2590, 3000
Bse118I	RCCGGY	1 cut(s)	1249
Bse1I	ACTGG	8 cut(s)	490, 604, 1161, 1528, 2564, 2611, 2817, 2994
Bse21I	CCTNAGG	1 cut(s)	1815
Bse3DI	GCAATG	4 cut(s)	1877, 2142, 2377, 2520
Bse8I	GATNNNNATC	1 cut(s)	2250
BseBI	CCWGG	5 cut(s)	1541, 1605, 1974, 2315, 3146
BseCI	ATCGAT	1 cut(s)	2180
BseDI	CCNNGG	8 cut(s)	30, 381, 382, 1267, 1325, 1973, 1998, 2833
BseJI	GATNNNNATC	1 cut(s)	2250
BseLI	CCNNNNNNNGG	6 cut(s)	599, 1192, 1282, 1889, 2590, 3000
BseMI	GCAATG	4 cut(s)	1877, 2142, 2377, 2520
BseMII	CTCAG	8 cut(s)	136, 735, 873, 1806, 2214, 2420, 3254, 3286
BseNI	ACTGG	8 cut(s)	490, 604, 1161, 1528, 2564, 2611, 2817, 2994
BseRI	GAGGAG	4 cut(s)	38, 455, 2394, 3216
BseSI	GKGCMC	1 cut(s)	593
BseYI	CCCAGC	2 cut(s)	1109, 2167
BsgI	GTGCAG	3 cut(s)	212, 308, 1074
Bsh1236I	CGCG	1 cut(s)	1904
BshFI	GGCC	8 cut(s)	29, 50, 321, 1336, 1698, 1753, 2313, 2993
BshVI	ATCGAT	1 cut(s)	2180
BsiHKAI	GWGCWC	4 cut(s)	750, 1561, 2166, 3157
BsiHKCI	CYCGRG	1 cut(s)	382
BsiSI	CCGG	3 cut(s)	30, 383, 1250
BslFI	GGGAC	3 cut(s)	157, 1810, 2805
BslI	CCNNNNNNNGG	6 cut(s)	599, 1192, 1282, 1889, 2590, 3000
BsmAI	GTCTC	9 cut(s)	120, 140, 811, 1587, 1725, 1815, 2498, 2724, 3287
BsmFI	GGGAC	3 cut(s)	157, 1810, 2805
BsmI	GAATGC	1 cut(s)	1405
BsnI	GGCC	8 cut(s)	29, 50, 321, 1336, 1698, 1753, 2313, 2993
Bso31I	GGTCTC	2 cut(s)	140, 1815
BsoBI	CYCGRG	1 cut(s)	382
Bsp119I	TTCGAA	1 cut(s)	1213
Bsp1286I	GDGCHC	5 cut(s)	593, 750, 1561, 2166, 3157
Bsp1407I	TGTACA	2 cut(s)	1154, 2984
Bsp143I	GATC	6 cut(s)	1285, 2251, 2385, 2510, 2677, 2948
BspACI	CCGC	8 cut(s)	159, 1001, 1902, 2484, 2487, 2496, 2996, 3079
BspANI	GGCC	8 cut(s)	29, 50, 321, 1336, 1698, 1753, 2313, 2993
BspCNI	CTCAG	8 cut(s)	135, 736, 874, 1807, 2215, 2419, 3253, 3285
BspDI	ATCGAT	1 cut(s)	2180
BspFNI	CGCG	1 cut(s)	1904
BspHI	TCATGA	2 cut(s)	1060, 3138
BspLI	GGNNCC	8 cut(s)	255, 308, 1538, 2029, 2334, 2994, 3312, 3405
BspMAI	CTGCAG	2 cut(s)	2533, 3367
BspMI	ACCTGC	1 cut(s)	3140
BspPI	GGATC	4 cut(s)	1293, 2259, 2685, 2956
BspQI	GCTCTTC	2 cut(s)	8, 2154
BspT104I	TTCGAA	1 cut(s)	1213
BspTI	CTTAAG	3 cut(s)	821, 1030, 1700
BspTNI	GGTCTC	2 cut(s)	140, 1815
BsrDI	GCAATG	4 cut(s)	1877, 2142, 2377, 2520
BsrFI	RCCGGY	1 cut(s)	1249
BsrGI	TGTACA	2 cut(s)	1154, 2984
BsrI	ACTGG	8 cut(s)	490, 604, 1161, 1528, 2564, 2611, 2817, 2994
BssAI	RCCGGY	1 cut(s)	1249
BssECI	CCNNGG	8 cut(s)	30, 381, 382, 1267, 1325, 1973, 1998, 2833
BssMI	GATC	6 cut(s)	1285, 2251, 2385, 2510, 2677, 2948
BssNAI	GTATAC	2 cut(s)	962, 1937
BssNI	GRCGYC	1 cut(s)	1247
BssT1I	CCWWGG	3 cut(s)	1267, 1325, 1998
Bst1107I	GTATAC	2 cut(s)	962, 1937
Bst2UI	CCWGG	5 cut(s)	1541, 1605, 1974, 2315, 3146
Bst6I	CTCTTC	5 cut(s)	8, 15, 2154, 2727, 2910
BstACI	GRCGYC	1 cut(s)	1247
BstAFI	CTTAAG	3 cut(s)	821, 1030, 1700
BstAPI	GCANNNNNTGC	3 cut(s)	1862, 3223, 3338
BstAUI	TGTACA	2 cut(s)	1154, 2984
BstBAI	YACGTR	1 cut(s)	3398
BstBI	TTCGAA	1 cut(s)	1213
BstC8I	GCNNGC	9 cut(s)	227, 247, 323, 1251, 1895, 1899, 1984, 2739, 3040
BstEII	GGTNACC	1 cut(s)	1271
BstFNI	CGCG	1 cut(s)	1904
BstH2I	RGCGCY	1 cut(s)	2617
BstHHI	GCGC	1 cut(s)	2616
BstKTI	GATC	6 cut(s)	1288, 2254, 2388, 2513, 2680, 2951
BstMAI	GTCTC	9 cut(s)	120, 140, 811, 1587, 1725, 1815, 2498, 2724, 3287
BstMBI	GATC	6 cut(s)	1285, 2251, 2385, 2510, 2677, 2948
BstNI	CCWGG	5 cut(s)	1541, 1605, 1974, 2315, 3146
BstNSI	RCATGY	5 cut(s)	249, 284, 947, 3355, 3381
BstPAI	GACNNNNGTC	1 cut(s)	132
BstPI	GGTNACC	1 cut(s)	1271
BstSCI	CCNGG	8 cut(s)	29, 381, 382, 1539, 1603, 1972, 2313, 3144
BstSFI	CTRYAG	2 cut(s)	2529, 3363
BstSLI	GKGCMC	1 cut(s)	593
BstUI	CGCG	1 cut(s)	1904
BstV2I	GAAGAC	2 cut(s)	2435, 3274
BstX2I	RGATCY	3 cut(s)	1285, 2251, 2677
BstYI	RGATCY	3 cut(s)	1285, 2251, 2677
BstZ17I	GTATAC	2 cut(s)	962, 1937
Bsu15I	ATCGAT	1 cut(s)	2180
Bsu36I	CCTNAGG	1 cut(s)	1815
BsuRI	GGCC	8 cut(s)	29, 50, 321, 1336, 1698, 1753, 2313, 2993
BsuTUI	ATCGAT	1 cut(s)	2180
BtsI	GCAGTG	3 cut(s)	2350, 2823, 3049
BveI	ACCTGC	1 cut(s)	3140
Cac8I	GCNNGC	9 cut(s)	227, 247, 323, 1251, 1895, 1899, 1984, 2739, 3040
CaiI	CAGNNNCTG	2 cut(s)	2537, 3338
CciI	TCATGA	2 cut(s)	1060, 3138
CfoI	GCGC	1 cut(s)	2616
Cfr10I	RCCGGY	1 cut(s)	1249
Cfr13I	GGNCC	3 cut(s)	2027, 2846, 2992
Cfr9I	CCCGGG	1 cut(s)	382
ClaI	ATCGAT	1 cut(s)	2180
CseI	GACGC	2 cut(s)	1255, 3324
DpnI	GATC	6 cut(s)	1287, 2253, 2387, 2512, 2679, 2950
DpnII	GATC	6 cut(s)	1285, 2251, 2385, 2510, 2677, 2948
DraIII	CACNNNGTG	1 cut(s)	368
Eam1104I	CTCTTC	5 cut(s)	8, 15, 2154, 2727, 2910
EarI	CTCTTC	5 cut(s)	8, 15, 2154, 2727, 2910
EciI	GGCGGA	1 cut(s)	3094
Ecl136II	GAGCTC	2 cut(s)	748, 2164
Eco130I	CCWWGG	3 cut(s)	1267, 1325, 1998
Eco147I	AGGCCT	2 cut(s)	321, 1698
Eco24I	GRGCYC	2 cut(s)	750, 2166
Eco31I	GGTCTC	2 cut(s)	140, 1815
Eco32I	GATATC	1 cut(s)	636
Eco47I	GGWCC	2 cut(s)	2027, 2846
Eco53kI	GAGCTC	2 cut(s)	748, 2164
Eco57I	CTGAAG	4 cut(s)	236, 992, 1823, 2043
Eco81I	CCTNAGG	1 cut(s)	1815
Eco88I	CYCGRG	1 cut(s)	382
Eco91I	GGTNACC	1 cut(s)	1271
EcoICRI	GAGCTC	2 cut(s)	748, 2164
EcoO65I	GGTNACC	1 cut(s)	1271
EcoRI	GAATTC	2 cut(s)	69, 1407
EcoRII	CCWGG	5 cut(s)	1539, 1603, 1972, 2313, 3144
EcoRV	GATATC	1 cut(s)	636
EcoT14I	CCWWGG	3 cut(s)	1267, 1325, 1998
EcoT22I	ATGCAT	5 cut(s)	247, 282, 409, 1459, 3379
EcoT38I	GRGCYC	2 cut(s)	750, 2166
ErhI	CCWWGG	3 cut(s)	1267, 1325, 1998
FalI	AAGNNNNNCTT	4 cut(s)	2500, 2532, 2630, 2662
FaqI	GGGAC	3 cut(s)	157, 1810, 2805
FauI	CCCGC	1 cut(s)	3003
FauNDI	CATATG	1 cut(s)	2382
FblI	GTMKAC	3 cut(s)	961, 1936, 3168
FriOI	GRGCYC	2 cut(s)	750, 2166
FspBI	CTAG	6 cut(s)	833, 986, 1332, 2303, 2711, 3188
GlaI	GCGC	1 cut(s)	2615
GsaI	CCCAGC	2 cut(s)	1113, 2171
HaeII	RGCGCY	1 cut(s)	2617
HaeIII	GGCC	8 cut(s)	29, 50, 321, 1336, 1698, 1753, 2313, 2993
HapII	CCGG	3 cut(s)	30, 383, 1250
HgaI	GACGC	2 cut(s)	1255, 3324
HhaI	GCGC	1 cut(s)	2616
Hin1I	GRCGYC	1 cut(s)	1247
Hin6I	GCGC	1 cut(s)	2614
HinP1I	GCGC	1 cut(s)	2614
HincII	GTYRAC	1 cut(s)	2041
HindII	GTYRAC	1 cut(s)	2041
HindIII	AAGCTT	1 cut(s)	149
HpaII	CCGG	3 cut(s)	30, 383, 1250
HphI	GGTGA	7 cut(s)	92, 97, 173, 590, 1310, 1445, 2954
Hpy166II	GTNNAC	9 cut(s)	183, 605, 962, 1712, 1937, 2041, 2146, 2987, 3169
Hpy8I	GTNNAC	9 cut(s)	183, 605, 962, 1712, 1937, 2041, 2146, 2987, 3169
Hpy99I	CGWCG	2 cut(s)	78, 1249
HpyCH4IV	ACGT	3 cut(s)	1051, 2148, 3397
HpySE526I	ACGT	3 cut(s)	1051, 2148, 3397
Hsp92I	GRCGYC	1 cut(s)	1247
HspAI	GCGC	1 cut(s)	2614
KroI	GCCGGC	1 cut(s)	1249
KroNI	GCCGGC	1 cut(s)	1251
Kzo9I	GATC	6 cut(s)	1285, 2251, 2385, 2510, 2677, 2948
LguI	GCTCTTC	2 cut(s)	8, 2154
LweI	GCATC	9 cut(s)	267, 470, 496, 847, 1104, 1444, 1466, 2179, 3364
MaeI	CTAG	6 cut(s)	833, 986, 1332, 2303, 2711, 3188
MaeII	ACGT	3 cut(s)	1051, 2148, 3397
MaeIII	GTNAC	9 cut(s)	488, 647, 665, 937, 1271, 2068, 2276, 2819, 3190
MalI	GATC	6 cut(s)	1287, 2253, 2387, 2512, 2679, 2950
MboI	GATC	6 cut(s)	1285, 2251, 2385, 2510, 2677, 2948
MfeI	CAATTG	3 cut(s)	498, 1392, 1944
MflI	RGATCY	3 cut(s)	1285, 2251, 2677
MhlI	GDGCHC	5 cut(s)	593, 750, 1561, 2166, 3157
MlyI	GAGTC	3 cut(s)	32, 87, 3445
MmeI	TCCRAC	2 cut(s)	1514, 2005
Mph1103I	ATGCAT	5 cut(s)	247, 282, 409, 1459, 3379
MroNI	GCCGGC	1 cut(s)	1249
MroXI	GAANNNNTTC	1 cut(s)	785
MslI	CAYNNNNRTG	2 cut(s)	780, 2272
MspA1I	CMGCKG	3 cut(s)	1681, 1802, 2012
MspCI	CTTAAG	3 cut(s)	821, 1030, 1700
MspI	CCGG	3 cut(s)	30, 383, 1250
MspR9I	CCNGG	8 cut(s)	31, 383, 384, 1541, 1605, 1974, 2315, 3146
MunI	CAATTG	3 cut(s)	498, 1392, 1944
Mva1269I	GAATGC	1 cut(s)	1405
MvaI	CCWGG	5 cut(s)	1541, 1605, 1974, 2315, 3146
MvnI	CGCG	1 cut(s)	1904
NaeI	GCCGGC	1 cut(s)	1251
NciI	CCSGG	3 cut(s)	31, 383, 384
NdeI	CATATG	1 cut(s)	2382
NdeII	GATC	6 cut(s)	1285, 2251, 2385, 2510, 2677, 2948
NgoMIV	GCCGGC	1 cut(s)	1249
NlaIV	GGNNCC	8 cut(s)	255, 308, 1538, 2029, 2334, 2994, 3312, 3405
NmuCI	GTSAC	6 cut(s)	647, 665, 937, 2068, 2276, 3190
NsiI	ATGCAT	5 cut(s)	247, 282, 409, 1459, 3379
NspI	RCATGY	5 cut(s)	249, 284, 947, 3355, 3381
NspV	TTCGAA	1 cut(s)	1213
PaeI	GCATGC	1 cut(s)	249
PagI	TCATGA	2 cut(s)	1060, 3138
PaqCI	CACCTGC	1 cut(s)	3140
PceI	AGGCCT	2 cut(s)	321, 1698
PciI	ACATGT	2 cut(s)	943, 3351
PciSI	GCTCTTC	2 cut(s)	8, 2154
PctI	GAATGC	1 cut(s)	1405
PdiI	GCCGGC	1 cut(s)	1251
PdmI	GAANNNNTTC	1 cut(s)	785
PfeI	GAWTC	8 cut(s)	338, 786, 967, 1223, 1952, 2557, 2770, 2878
PflFI	GACNNNGTC	1 cut(s)	2282
PleI	GAGTC	3 cut(s)	32, 86, 3445
PpsI	GAGTC	3 cut(s)	32, 86, 3445
Ppu21I	YACGTR	1 cut(s)	3398
PscI	ACATGT	2 cut(s)	943, 3351
PshAI	GACNNNNGTC	1 cut(s)	132
PshBI	ATTAAT	1 cut(s)	2931
Psp124BI	GAGCTC	2 cut(s)	750, 2166
Psp6I	CCWGG	5 cut(s)	1539, 1603, 1972, 2313, 3144
PspEI	GGTNACC	1 cut(s)	1271
PspFI	CCCAGC	2 cut(s)	1109, 2167
PspGI	CCWGG	5 cut(s)	1539, 1603, 1972, 2313, 3144
PspN4I	GGNNCC	8 cut(s)	255, 308, 1538, 2029, 2334, 2994, 3312, 3405
PspPI	GGNCC	3 cut(s)	2027, 2846, 2992
PsrI	GAACNNNNNNTAC	4 cut(s)	595, 627, 945, 977
PstI	CTGCAG	2 cut(s)	2533, 3367
PstNI	CAGNNNCTG	2 cut(s)	2537, 3338
PsuI	RGATCY	3 cut(s)	1285, 2251, 2677
PsyI	GACNNNGTC	1 cut(s)	2282
PvuII	CAGCTG	3 cut(s)	1681, 1802, 2012
RseI	CAYNNNNRTG	2 cut(s)	780, 2272
SacI	GAGCTC	2 cut(s)	750, 2166
SapI	GCTCTTC	2 cut(s)	8, 2154
Sau3AI	GATC	6 cut(s)	1285, 2251, 2385, 2510, 2677, 2948
Sau96I	GGNCC	3 cut(s)	2027, 2846, 2992
ScaI	AGTACT	1 cut(s)	831
SchI	GAGTC	3 cut(s)	32, 87, 3445
ScrFI	CCNGG	8 cut(s)	31, 383, 384, 1541, 1605, 1974, 2315, 3146
SduI	GDGCHC	5 cut(s)	593, 750, 1561, 2166, 3157
SfaNI	GCATC	9 cut(s)	267, 470, 496, 847, 1104, 1444, 1466, 2179, 3364
SfcI	CTRYAG	2 cut(s)	2529, 3363
SfuI	TTCGAA	1 cut(s)	1213
SinI	GGWCC	2 cut(s)	2027, 2846
SmaI	CCCGGG	1 cut(s)	384
SmiMI	CAYNNNNRTG	2 cut(s)	780, 2272
SphI	GCATGC	1 cut(s)	249
SseBI	AGGCCT	2 cut(s)	321, 1698
SsiI	CCGC	8 cut(s)	159, 1001, 1902, 2484, 2487, 2496, 2996, 3079
SspI	AATATT	3 cut(s)	1911, 2955, 3265
SspMI	CTAG	6 cut(s)	833, 986, 1332, 2303, 2711, 3188
SstI	GAGCTC	2 cut(s)	750, 2166
StuI	AGGCCT	2 cut(s)	321, 1698
StyD4I	CCNGG	8 cut(s)	29, 381, 382, 1539, 1603, 1972, 2313, 3144
StyI	CCWWGG	3 cut(s)	1267, 1325, 1998
TaiI	ACGT	3 cut(s)	1054, 2151, 3400
TaqI	TCGA	7 cut(s)	41, 76, 478, 1213, 1832, 2180, 2560
TatI	WGTACW	4 cut(s)	182, 829, 1154, 2984
TauI	GCSGC	3 cut(s)	1904, 2487, 2499
TfiI	GAWTC	8 cut(s)	338, 786, 967, 1223, 1952, 2557, 2770, 2878
TseFI	GTSAC	6 cut(s)	647, 665, 937, 2068, 2276, 3190
Tsp45I	GTSAC	6 cut(s)	647, 665, 937, 2068, 2276, 3190
TspGWI	ACGGA	3 cut(s)	388, 734, 2606
TspMI	CCCGGG	1 cut(s)	382
Tth111I	GACNNNGTC	1 cut(s)	2282
Vha464I	CTTAAG	3 cut(s)	821, 1030, 1700
VpaK11BI	GGWCC	2 cut(s)	2027, 2846
VspI	ATTAAT	1 cut(s)	2931
XapI	RAATTY	9 cut(s)	69, 581, 848, 912, 1025, 1302, 1407, 2704, 3026
XceI	RCATGY	5 cut(s)	249, 284, 947, 3355, 3381
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2624
XmaI	CCCGGG	1 cut(s)	382
XmiI	GTMKAC	3 cut(s)	961, 1936, 3168
XmnI	GAANNNNTTC	1 cut(s)	785
XspI	CTAG	6 cut(s)	833, 986, 1332, 2303, 2711, 3188
ZrmI	AGTACT	1 cut(s)	831
Zsp2I	ATGCAT	5 cut(s)	247, 282, 409, 1459, 3379

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.