Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr11

Orthogroup ID

OG0005756

Physical Location & Seq

Genomic Coordinates Forward (+)

19136790 .. 19143786

Gene Structure 6997 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom11g17120.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2313 bp

ATGTGGGACAGCTGTTGGGTCTCCCGAGGTTCATTTATCAGCAAGACTTCAGGTATTGTTACAGGAGAAGCGGAATATGCTGATGACACACCATTGCCTCCTAATTGTTTACACGCTGCTTTAATACTCAGCAGAAAGCCTCACGCTCGTATATGTTCAATCGATGATTCTGGAGCAAAGTTATCACCTGGGTTTGCAGGCATATATTTAGCAAAGAACGTTCCAGCTGATAATAACATTGGACCAGTTGTTGAAGACGAGGAACTATTTGCTTCAGAATTTGTCACTTGTGTAGGTCAGGTTATAGGAGTGGTAGTTGCTGATACACATGAGAATGCAAAACTAGCAGCGAGGAAGGTTCATGTTGAGTATGAAGAGCTACCAGCCATCTTATCAATACAGGATGCCATTGATGCCAAAAGTTTCCATCCGAATACGGAGAGGTGTTTGAGGAAAGGGGATGTGGATATTTGCTTTCAATCAAGTCAATGTGACCATGTCATAGAGGGGGAAGTTCGAGTCGGCGGACAGGAACACTTCTATTTGGAGCCAAATAGCAGTGTGGTATGGACAGTGGATGGTGGCAATGAAGTTCATATGATCTCATCCACTCAGGCCCCTCAGAAGCACCAGAAATACGTTTCTCATGTTCTTGGTCTTCCAATGTCGAAAGTCGTTTGTAAAACTAAGCGCATTGGTGGTGGTTTTGGCGGCAAGGAGACTAGGTCAGCTTTCATTGCTGCTGCAGCCGCGGTTCCAGCATATCTGTTAAATCGTCCGGTTAAAATTACATTAGACCGTGATACAGATATGATGATAACTGGACAACGCCATAGCTTTCTCGGAAAGTACAAGGTTGGATTTACAAATGAGGGCAAGGTGTTGGCACTGGATCTTGAAATCTACAATAATGCTGGAAATTCGCTAGATTTGTCTCTTCCCGTACTTGAACGTGCTATGTTTCACTCAGATAACGTCTATGAGATTCCAAATGTGAGGATTGTAGGAAGGGTTTGCTTCACTAACATTCCAAGTAACACTGCTTTTCGAGGATTTGGTGGTCCTCAAGGTATGATTATTGTGGAAAATTGGATTCAGAGGATTGCTGCAGAACTCAAAAAAAGTCCAGAAGAGATAAAGGAAATTAATTTTCAAGGTGAAGGATCAATATTGCATTATGGTCAACAACTTAAACACTGCACATTGGGTCCGCTCTGGAATCAACTGAAGTCATCTTGTGAATTTTCAAAGGCTCGCTACGAAGTTGACCAATTTAATATTCAAAATCGGTGGCGGAAGCGTGGTATTGCCATGGTTCCAACAAAATTTGGCATAGCCTTTACGTCAAAGTTTATGAACCAGGCAGGTGCTCTTGTTCATGTCTACACAGACGGAACTGTTTTAGTCTCACATGGAGGTGTAGAGATGGGGCAAGGTTTACATACAAAAGTTGCTCAGGTCGCTGCTTCCGCCTTCAATATCCCTCTCGGTTCTGTCTTTATTTCGGAGACAAGTACTGACAAGGTTCCTAATGCAACGCCAACAGCAGCTTCTGCAAGTTCTGACATGTATGGAGCTGCAGTTCTAGATGCATGTGAGAAAATTAAGGCACGTATGAAGCCTATTGCTTCACAGCAAAATTTCAGCTCTTTTGCCGAGCTGGCAAGTGCATGCTATGTGGAACGGATAGATCTTTCTGCTCATGGGTTTTACATTACACCGGAAATTGGCTTTGATTGGACAATTGGTAAAGGGAACCCATTCAACTACTTCACATATGGGGCTGCTTTTGCTGAGGTTGAAATTGATACATTGACTGGAGATTTTCACACTAGAGCGGCTAACATATTCTTGGATCTTGGTTACTCTCTCAACCCCGCAATTGATGTTGGGCAGATTGAAGGAGCATTTGTACAAGGTTTGGGATGGGTAGCTCTAGAAGAACTAAAGTGGGGCGATCCTGCTCATAAATGGATCTCACCCGGTTGCCTCTACACATCTGGGCCGGGAAGTTACAAGATTCCTTCCATTAATGATGTCCCCTTCAAATTCAGCGTTTCACTTCTGAAGGGCCATCCAAATGTGAAGGCCATCCACTCATCTAAAGCTGTTGGTGAGCCACCATTTTTCTTGGCATCAGCCGTCTTCTTCGCCATCAAAGACGCCATAATAGCTGCAAGAGCAGAAGTAGGGTCTAATGAGTGGTTTCCACTTGATAATCCCGCGACACCTGAACGGATACGGATGGCCTGCTTAGACGAAATTATTGAACCATTTGTAAGCACAGATTTCCGCGCCAAGCTTAGCGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0000302 GO:0001101 GO:0003674 GO:0003824 GO:0004854 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006139 GO:0006144 GO:0006145 GO:0006725 GO:0006801 GO:0006807 GO:0006950 GO:0006979 GO:0008150 GO:0008152 GO:0009056 GO:0009112 GO:0009115 GO:0009414 GO:0009415 GO:0009628 GO:0009987 GO:0010035 GO:0016491 GO:0016725 GO:0016726 GO:0016903 GO:0019439 GO:0034641 GO:0036094 GO:0042221 GO:0042554 GO:0043167 GO:0043168 GO:0043546 GO:0044237 GO:0044238 GO:0044248 GO:0044270 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046110 GO:0046113 GO:0046483 GO:0046700 GO:0048037 GO:0050660 GO:0050662 GO:0050896 GO:0051536 GO:0051537 GO:0051540 GO:0055086 GO:0055114 GO:0071704 GO:0072521 GO:0072523 GO:0072593 GO:0097159 GO:1901265 GO:1901360 GO:1901361 GO:1901363 GO:1901564 GO:1901565 GO:1901575 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00230 ko00232 ko00983 ko01100 ko01110 ko01120 ko04146 map00230 map00232 map00983 map01100 map01110 map01120 map04146

Pfam Domains

Protein Families

Ald_Xan_dh_C Ald_Xan_dh_C2 CO_deh_flav_C FAD_binding_5 Fer2 Fer2_2

Protein Analysis

771

Amino Acids

83.96

Weight (kDa)

5.96

Isoelectric Point (pI)

32.92

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005756)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G34890 AT4G34900 AT4G34900 AT4G34900
fragaria_vesca	FvH4_3g29000 FvH4_3g29000 FvH4_3g29000 FvH4_3g29000
malus_domestica	MD03G1177200.v1.1 MD11G1161000.v1.1 MD11G1197900.v1.1
prunus_persica	Prupe.4G245700_v2.0.a1 Prupe.4G245700_v2.0.a1
pyrus_communis	pycom11g13410 pycom11g17110 pycom11g17120
rosa_chinensis	RchiOBHm_Chr5g0051661
rosa_laevigata	RLG00000034866
rosa_multiflora	Rmu_sc0000068.1_g000026 Rmu_sc0014882.1_g000001 Rmu_sc0018333.1_g000002
rosa_roxburghii	Rroxscaffold_1G00027170
rosa_rugosa	Rorug05G0277900
rosa_samantha	Rh5AG349700 Rh5BG361400 Rh5CG385900 Rh5DG376200
rosa_wichuraiana	Rw5G033070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1355
Acc36I	ACCTGC	1 cut(s)	1355
AccBSI	CCGCTC	2 cut(s)	1213, 1838
AccI	GTMKAC	1 cut(s)	1383
AccII	CGCG	3 cut(s)	752, 2225, 2295
AclI	AACGTT	1 cut(s)	219
AclWI	GGATC	5 cut(s)	900, 1171, 1863, 1952, 1982
AcsI	RAATTY	6 cut(s)	278, 919, 1241, 1325, 1639, 2048
AcuI	CTGAAG	4 cut(s)	33, 258, 1247, 2087
AcyI	GRCGYC	1 cut(s)	2163
AfaI	GTAC	4 cut(s)	851, 945, 1516, 1914
AfiI	CCNNNNNNNGG	1 cut(s)	1727
AflIII	ACRYGT	1 cut(s)	1566
AjnI	CCWGG	2 cut(s)	187, 1359
AjuI	GAANNNNNNNTTGG	4 cut(s)	1263, 1295, 1534, 1566
AloI	GAACNNNNNNTCC	2 cut(s)	1566, 1598
Alw21I	GWGCWC	1 cut(s)	1372
Alw26I	GTCTC	5 cut(s)	25, 713, 939, 1411, 1502
AlwI	GGATC	5 cut(s)	900, 1171, 1863, 1952, 1982
AlwNI	CAGNNNCTG	1 cut(s)	1553
Ama87I	CYCGRG	1 cut(s)	24
AoxI	GGCC	5 cut(s)	615, 2003, 2071, 2088, 2247
ApoI	RAATTY	6 cut(s)	278, 919, 1241, 1325, 1639, 2048
AseI	ATTAAT	2 cut(s)	1146, 2031
Asp700I	GAANNNNTTC	1 cut(s)	1760
AspLEI	GCGC	2 cut(s)	693, 2297
AspS9I	GGNCC	6 cut(s)	242, 616, 1061, 1208, 2003, 2071
AsuC2I	CCSGG	2 cut(s)	1983, 2007
AsuHPI	GGTGA	4 cut(s)	177, 1169, 1971, 2126
AvaI	CYCGRG	1 cut(s)	24
AvaII	GGWCC	3 cut(s)	242, 1061, 1208
BbsI	GAAGAC	3 cut(s)	261, 650, 2137
Bbv12I	GWGCWC	1 cut(s)	1372
BbvCI	CCTCAGC	1 cut(s)	1794
BccI	CCATC	9 cut(s)	395, 435, 572, 1420, 1920, 2082, 2099, 2162, 2239
BceAI	ACGGC	1 cut(s)	2126
BciT130I	CCWGG	2 cut(s)	189, 1361
BciVI	GTATCC	1 cut(s)	2232
BcnI	CCSGG	2 cut(s)	1983, 2007
BcoDI	GTCTC	5 cut(s)	25, 713, 939, 1411, 1502
BfaI	CTAG	6 cut(s)	344, 723, 926, 1586, 1833, 1937
BfmI	CTRYAG	3 cut(s)	744, 1107, 1578
BfuAI	ACCTGC	1 cut(s)	1355
BfuI	GTATCC	1 cut(s)	2232
BglI	GCCNNNNNGGC	1 cut(s)	1661
BglII	AGATCT	1 cut(s)	1690
BlpI	GCTNAGC	1 cut(s)	2303
BmcAI	AGTACT	1 cut(s)	1516
Bme1390I	CCNGG	4 cut(s)	189, 1361, 1983, 2007
Bme18I	GGWCC	3 cut(s)	242, 1061, 1208
BmeT110I	CYCGRG	1 cut(s)	24
BmgT120I	GGNCC	6 cut(s)	242, 616, 1061, 1208, 2003, 2071
BmiI	GGNNCC	7 cut(s)	549, 618, 756, 1209, 1317, 1527, 1757
BmrFI	CCNGG	4 cut(s)	189, 1361, 1983, 2007
BmsI	GCATC	4 cut(s)	394, 403, 1579, 2144
BpiI	GAAGAC	3 cut(s)	261, 650, 2137
BpmI	CTGGAG	2 cut(s)	192, 1839
Bpu10I	CCTNAGC	2 cut(s)	1455, 1794
Bpu1102I	GCTNAGC	1 cut(s)	2303
BpuEI	CTTGAG	1 cut(s)	1050
BpuMI	CCSGG	2 cut(s)	1983, 2007
Bsa29I	ATCGAT	1 cut(s)	162
BsaAI	YACGTR	1 cut(s)	1613
BsaHI	GRCGYC	1 cut(s)	2163
BsaI	GGTCTC	1 cut(s)	25
BsaJI	CCNNGG	4 cut(s)	25, 188, 750, 1311
BsaWI	WCCGGW	2 cut(s)	778, 1720
BsaXI	ACNNNNNCTCC	8 cut(s)	300, 330, 710, 740, 1566, 1596, 1896, 1926
Bsc4I	CCNNNNNNNGG	1 cut(s)	1727
Bse1I	ACTGG	4 cut(s)	245, 826, 894, 1822
Bse3DI	GCAATG	3 cut(s)	92, 592, 735
BseBI	CCWGG	2 cut(s)	189, 1361
BseCI	ATCGAT	1 cut(s)	162
BseDI	CCNNGG	4 cut(s)	25, 188, 750, 1311
BseGI	GGATG	9 cut(s)	409, 427, 466, 583, 605, 1931, 2074, 2091, 2250
BseLI	CCNNNNNNNGG	1 cut(s)	1727
BseMI	GCAATG	3 cut(s)	92, 592, 735
BseMII	CTCAG	6 cut(s)	142, 626, 635, 981, 1469, 1785
BseNI	ACTGG	4 cut(s)	245, 826, 894, 1822
BsgI	GTGCAG	1 cut(s)	1183
Bsh1236I	CGCG	3 cut(s)	752, 2225, 2295
BshFI	GGCC	5 cut(s)	617, 2005, 2073, 2090, 2249
BshVI	ATCGAT	1 cut(s)	162
BsiHKAI	GWGCWC	1 cut(s)	1372
BsiHKCI	CYCGRG	1 cut(s)	24
BsiSI	CCGG	4 cut(s)	779, 1721, 1983, 2006
BslFI	GGGAC	2 cut(s)	20, 2024
BslI	CCNNNNNNNGG	1 cut(s)	1727
BsmAI	GTCTC	5 cut(s)	25, 713, 939, 1411, 1502
BsmFI	GGGAC	2 cut(s)	20, 2024
BsmI	GAATGC	1 cut(s)	340
BsnI	GGCC	5 cut(s)	617, 2005, 2073, 2090, 2249
Bso31I	GGTCTC	1 cut(s)	25
BsoBI	CYCGRG	1 cut(s)	24
Bsp1286I	GDGCHC	1 cut(s)	1372
Bsp1407I	TGTACA	1 cut(s)	1912
Bsp143I	GATC	7 cut(s)	600, 892, 1163, 1690, 1855, 1957, 1974
Bsp1720I	GCTNAGC	1 cut(s)	2303
Bsp19I	CCATGG	1 cut(s)	1311
BspANI	GGCC	5 cut(s)	617, 2005, 2073, 2090, 2249
BspCNI	CTCAG	6 cut(s)	141, 625, 634, 980, 1468, 1786
BspDI	ATCGAT	1 cut(s)	162
BspFNI	CGCG	3 cut(s)	752, 2225, 2295
BspLI	GGNNCC	7 cut(s)	549, 618, 756, 1209, 1317, 1527, 1757
BspMAI	CTGCAG	3 cut(s)	748, 1111, 1582
BspMI	ACCTGC	1 cut(s)	1355
BspPI	GGATC	5 cut(s)	900, 1171, 1863, 1952, 1982
BspQI	GCTCTTC	1 cut(s)	369
BspTNI	GGTCTC	1 cut(s)	25
BsrBI	CCGCTC	2 cut(s)	1213, 1838
BsrDI	GCAATG	3 cut(s)	92, 592, 735
BsrGI	TGTACA	1 cut(s)	1912
BsrI	ACTGG	4 cut(s)	245, 826, 894, 1822
BssECI	CCNNGG	4 cut(s)	25, 188, 750, 1311
BssMI	GATC	7 cut(s)	600, 892, 1163, 1690, 1855, 1957, 1974
BssNI	GRCGYC	1 cut(s)	2163
BssT1I	CCWWGG	1 cut(s)	1311
Bst2UI	CCWGG	2 cut(s)	189, 1361
Bst4CI	ACNGT	3 cut(s)	574, 800, 1399
Bst6I	CTCTTC	3 cut(s)	369, 942, 1125
BstACI	GRCGYC	1 cut(s)	2163
BstAPI	GCANNNNNTGC	1 cut(s)	1553
BstAUI	TGTACA	1 cut(s)	1912
BstBAI	YACGTR	1 cut(s)	1613
BstC8I	GCNNGC	5 cut(s)	199, 1255, 1662, 1672, 2251
BstDEI	CTNAG	9 cut(s)	128, 612, 621, 687, 967, 1455, 1794, 2254, 2303
BstDSI	CCRYGG	2 cut(s)	750, 1311
BstF5I	GGATG	9 cut(s)	409, 427, 466, 583, 605, 1931, 2074, 2091, 2250
BstFNI	CGCG	3 cut(s)	752, 2225, 2295
BstHHI	GCGC	2 cut(s)	693, 2297
BstKTI	GATC	7 cut(s)	603, 895, 1166, 1693, 1858, 1960, 1977
BstMAI	GTCTC	5 cut(s)	25, 713, 939, 1411, 1502
BstMBI	GATC	7 cut(s)	600, 892, 1163, 1690, 1855, 1957, 1974
BstNI	CCWGG	2 cut(s)	189, 1361
BstNSI	RCATGY	3 cut(s)	1570, 1596, 1674
BstSCI	CCNGG	4 cut(s)	187, 1359, 1981, 2005
BstSFI	CTRYAG	3 cut(s)	744, 1107, 1578
BstUI	CGCG	3 cut(s)	752, 2225, 2295
BstV2I	GAAGAC	3 cut(s)	261, 650, 2137
BstX2I	RGATCY	4 cut(s)	892, 1690, 1855, 1974
BstYI	RGATCY	4 cut(s)	892, 1690, 1855, 1974
Bsu15I	ATCGAT	1 cut(s)	162
BsuI	GTATCC	1 cut(s)	2232
BsuRI	GGCC	5 cut(s)	617, 2005, 2073, 2090, 2249
BsuTUI	ATCGAT	1 cut(s)	162
BtgI	CCRYGG	2 cut(s)	750, 1311
BtsCI	GGATG	9 cut(s)	409, 427, 466, 583, 605, 1931, 2074, 2091, 2250
BtsI	GCAGTG	3 cut(s)	565, 1038, 1195
BtsIMutI	CAGTG	5 cut(s)	565, 579, 887, 1038, 1195
BveI	ACCTGC	1 cut(s)	1355
Cac8I	GCNNGC	5 cut(s)	199, 1255, 1662, 1672, 2251
CaiI	CAGNNNCTG	1 cut(s)	1553
CfoI	GCGC	2 cut(s)	693, 2297
Cfr13I	GGNCC	6 cut(s)	242, 616, 1061, 1208, 2003, 2071
Cfr42I	CCGCGG	1 cut(s)	753
ClaI	ATCGAT	1 cut(s)	162
CseI	GACGC	1 cut(s)	2171
Csp6I	GTAC	4 cut(s)	850, 944, 1515, 1913
CspCI	CAANNNNNGTGG	2 cut(s)	1271, 1306
CviQI	GTAC	4 cut(s)	850, 944, 1515, 1913
DdeI	CTNAG	9 cut(s)	128, 612, 621, 687, 967, 1455, 1794, 2254, 2303
DpnI	GATC	7 cut(s)	602, 894, 1165, 1692, 1857, 1959, 1976
DpnII	GATC	7 cut(s)	600, 892, 1163, 1690, 1855, 1957, 1974
Eam1104I	CTCTTC	3 cut(s)	369, 942, 1125
EarI	CTCTTC	3 cut(s)	369, 942, 1125
EciI	GGCGGA	3 cut(s)	540, 1309, 1459
Eco130I	CCWWGG	1 cut(s)	1311
Eco31I	GGTCTC	1 cut(s)	25
Eco47I	GGWCC	3 cut(s)	242, 1061, 1208
Eco57I	CTGAAG	4 cut(s)	33, 258, 1247, 2087
Eco88I	CYCGRG	1 cut(s)	24
EcoO109I	RGGNCCY	1 cut(s)	616
EcoRII	CCWGG	2 cut(s)	187, 1359
EcoT14I	CCWWGG	1 cut(s)	1311
EcoT22I	ATGCAT	1 cut(s)	1594
ErhI	CCWWGG	1 cut(s)	1311
FaqI	GGGAC	2 cut(s)	20, 2024
FauI	CCCGC	2 cut(s)	1885, 2230
FauNDI	CATATG	2 cut(s)	597, 1777
FblI	GTMKAC	1 cut(s)	1383
FokI	GGATG	9 cut(s)	414, 416, 473, 590, 592, 1938, 2061, 2078, 2257
FspBI	CTAG	6 cut(s)	344, 723, 926, 1586, 1833, 1937
GlaI	GCGC	2 cut(s)	692, 2296
GsuI	CTGGAG	2 cut(s)	192, 1839
HaeIII	GGCC	5 cut(s)	617, 2005, 2073, 2090, 2249
HapII	CCGG	4 cut(s)	779, 1721, 1983, 2006
HgaI	GACGC	1 cut(s)	2171
HhaI	GCGC	2 cut(s)	693, 2297
Hin1I	GRCGYC	1 cut(s)	2163
Hin6I	GCGC	2 cut(s)	691, 2295
HinP1I	GCGC	2 cut(s)	691, 2295
HincII	GTYRAC	2 cut(s)	1184, 1267
HindII	GTYRAC	2 cut(s)	1184, 1267
HindIII	AAGCTT	1 cut(s)	2300
HinfI	GANTC	6 cut(s)	167, 519, 985, 1093, 1219, 2020
HpaII	CCGG	4 cut(s)	779, 1721, 1983, 2006
HphI	GGTGA	4 cut(s)	177, 1169, 1971, 2126
Hpy166II	GTNNAC	5 cut(s)	110, 1184, 1267, 1384, 1439
Hpy188I	TCNGA	9 cut(s)	277, 432, 624, 845, 970, 1098, 1507, 1564, 2067
Hpy188III	TCNNGA	7 cut(s)	24, 171, 896, 1127, 1216, 1586, 1937
Hpy8I	GTNNAC	5 cut(s)	110, 1184, 1267, 1384, 1439
HpyAV	CCTTC	9 cut(s)	349, 1002, 1154, 1483, 1895, 2034, 2053, 2062, 2080
HpyCH4III	ACNGT	3 cut(s)	574, 800, 1399
HpyCH4IV	ACGT	6 cut(s)	219, 639, 952, 975, 1343, 1612
HpyF3I	CTNAG	9 cut(s)	128, 612, 621, 687, 967, 1455, 1794, 2254, 2303
HpySE526I	ACGT	6 cut(s)	219, 639, 952, 975, 1343, 1612
Hsp92I	GRCGYC	1 cut(s)	2163
HspAI	GCGC	2 cut(s)	691, 2295
KspI	CCGCGG	1 cut(s)	753
Kzo9I	GATC	7 cut(s)	600, 892, 1163, 1690, 1855, 1957, 1974
LguI	GCTCTTC	1 cut(s)	369
LmnI	GCTCC	4 cut(s)	173, 547, 1574, 1904
LweI	GCATC	4 cut(s)	394, 403, 1579, 2144
MaeI	CTAG	6 cut(s)	344, 723, 926, 1586, 1833, 1937
MaeII	ACGT	6 cut(s)	219, 639, 952, 975, 1343, 1612
MaeIII	GTNAC	6 cut(s)	58, 283, 491, 1034, 1862, 2012
MalI	GATC	7 cut(s)	602, 894, 1165, 1692, 1857, 1959, 1976
MbiI	CCGCTC	2 cut(s)	1213, 1838
MboI	GATC	7 cut(s)	600, 892, 1163, 1690, 1855, 1957, 1974
MboII	GAAGA	8 cut(s)	266, 386, 650, 929, 1142, 1952, 2137, 2140
MfeI	CAATTG	2 cut(s)	1743, 1881
MflI	RGATCY	4 cut(s)	892, 1690, 1855, 1974
MhlI	GDGCHC	1 cut(s)	1372
MlyI	GAGTC	1 cut(s)	528
MmeI	TCCRAC	2 cut(s)	838, 1343
Mph1103I	ATGCAT	1 cut(s)	1594
MroXI	GAANNNNTTC	1 cut(s)	1760
MseI	TTAA	8 cut(s)	122, 770, 783, 1146, 1191, 1275, 1605, 2031
MslI	CAYNNNNRTG	3 cut(s)	333, 1416, 2079
MspA1I	CMGCKG	3 cut(s)	12, 227, 752
MspI	CCGG	4 cut(s)	779, 1721, 1983, 2006
MspR9I	CCNGG	4 cut(s)	189, 1361, 1983, 2007
MunI	CAATTG	2 cut(s)	1743, 1881
Mva1269I	GAATGC	1 cut(s)	340
MvaI	CCWGG	2 cut(s)	189, 1361
MvnI	CGCG	3 cut(s)	752, 2225, 2295
NciI	CCSGG	2 cut(s)	1983, 2007
NcoI	CCATGG	1 cut(s)	1311
NdeI	CATATG	2 cut(s)	597, 1777
NdeII	GATC	7 cut(s)	600, 892, 1163, 1690, 1855, 1957, 1974
NlaIV	GGNNCC	7 cut(s)	549, 618, 756, 1209, 1317, 1527, 1757
NmeAIII	GCCGAG	1 cut(s)	1681
NmuCI	GTSAC	2 cut(s)	283, 491
NsiI	ATGCAT	1 cut(s)	1594
NspI	RCATGY	3 cut(s)	1570, 1596, 1674
PaeI	GCATGC	1 cut(s)	1674
PaqCI	CACCTGC	1 cut(s)	1355
PciI	ACATGT	1 cut(s)	1566
PciSI	GCTCTTC	1 cut(s)	369
PctI	GAATGC	1 cut(s)	340
PdmI	GAANNNNTTC	1 cut(s)	1760
PfeI	GAWTC	5 cut(s)	167, 985, 1093, 1219, 2020
PflFI	GACNNNGTC	2 cut(s)	497, 724
PleI	GAGTC	1 cut(s)	527
PpsI	GAGTC	1 cut(s)	527
Ppu21I	YACGTR	1 cut(s)	1613
PscI	ACATGT	1 cut(s)	1566
PshBI	ATTAAT	2 cut(s)	1146, 2031
Psp1406I	AACGTT	1 cut(s)	219
Psp6I	CCWGG	2 cut(s)	187, 1359
PspGI	CCWGG	2 cut(s)	187, 1359
PspN4I	GGNNCC	7 cut(s)	549, 618, 756, 1209, 1317, 1527, 1757
PspPI	GGNCC	6 cut(s)	242, 616, 1061, 1208, 2003, 2071
PstI	CTGCAG	3 cut(s)	748, 1111, 1582
PstNI	CAGNNNCTG	1 cut(s)	1553
PsuI	RGATCY	4 cut(s)	892, 1690, 1855, 1974
PsyI	GACNNNGTC	2 cut(s)	497, 724
PvuII	CAGCTG	2 cut(s)	12, 227
RsaI	GTAC	4 cut(s)	851, 945, 1516, 1914
RsaNI	GTAC	4 cut(s)	850, 944, 1515, 1913
RseI	CAYNNNNRTG	3 cut(s)	333, 1416, 2079
SacII	CCGCGG	1 cut(s)	753
SapI	GCTCTTC	1 cut(s)	369
SaqAI	TTAA	8 cut(s)	122, 770, 783, 1146, 1191, 1275, 1605, 2031
Sau3AI	GATC	7 cut(s)	600, 892, 1163, 1690, 1855, 1957, 1974
Sau96I	GGNCC	6 cut(s)	242, 616, 1061, 1208, 2003, 2071
ScaI	AGTACT	1 cut(s)	1516
SchI	GAGTC	1 cut(s)	528
ScrFI	CCNGG	4 cut(s)	189, 1361, 1983, 2007
SduI	GDGCHC	1 cut(s)	1372
SfaNI	GCATC	4 cut(s)	394, 403, 1579, 2144
SfcI	CTRYAG	3 cut(s)	744, 1107, 1578
Sfr303I	CCGCGG	1 cut(s)	753
SgrBI	CCGCGG	1 cut(s)	753
SinI	GGWCC	3 cut(s)	242, 1061, 1208
SmiMI	CAYNNNNRTG	3 cut(s)	333, 1416, 2079
SmlI	CTYRAG	1 cut(s)	1065
SmoI	CTYRAG	1 cut(s)	1065
SphI	GCATGC	1 cut(s)	1674
SspI	AATATT	2 cut(s)	1170, 1279
SspMI	CTAG	6 cut(s)	344, 723, 926, 1586, 1833, 1937
StyD4I	CCNGG	4 cut(s)	187, 1359, 1981, 2005
StyI	CCWWGG	1 cut(s)	1311
TaaI	ACNGT	3 cut(s)	574, 800, 1399
TaiI	ACGT	6 cut(s)	222, 642, 955, 978, 1346, 1615
TaqI	TCGA	4 cut(s)	162, 517, 668, 1048
TatI	WGTACW	3 cut(s)	849, 1514, 1912
TauI	GCSGC	3 cut(s)	714, 752, 1841
TfiI	GAWTC	5 cut(s)	167, 985, 1093, 1219, 2020
Tru1I	TTAA	8 cut(s)	122, 770, 783, 1146, 1191, 1275, 1605, 2031
Tru9I	TTAA	8 cut(s)	122, 770, 783, 1146, 1191, 1275, 1605, 2031
TscAI	CASTG	5 cut(s)	565, 579, 894, 1045, 1202
TseFI	GTSAC	2 cut(s)	283, 491
Tsp45I	GTSAC	2 cut(s)	283, 491
TspDTI	ATGAA	9 cut(s)	21, 350, 387, 584, 603, 724, 1367, 1370, 1631
TspGWI	ACGGA	5 cut(s)	452, 1407, 1699, 2251, 2257
TspRI	CASTG	5 cut(s)	565, 579, 894, 1045, 1202
Tth111I	GACNNNGTC	2 cut(s)	497, 724
VpaK11BI	GGWCC	3 cut(s)	242, 1061, 1208
VspI	ATTAAT	2 cut(s)	1146, 2031
XapI	RAATTY	6 cut(s)	278, 919, 1241, 1325, 1639, 2048
XbaI	TCTAGA	2 cut(s)	1585, 1936
XceI	RCATGY	3 cut(s)	1570, 1596, 1674
XmiI	GTMKAC	1 cut(s)	1383
XmnI	GAANNNNTTC	1 cut(s)	1760
XspI	CTAG	6 cut(s)	344, 723, 926, 1586, 1833, 1937
ZrmI	AGTACT	1 cut(s)	1516
Zsp2I	ATGCAT	1 cut(s)	1594

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.