AT4G35310

Calcium-dependent protein kinase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
Physical Location & Seq
Forward (+)
16801605 .. 16805005
3401 bp
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UTR
Exon/CDS
Intron
AT4G35310.1

Sequence Viewer

Length: 1671 bp
ATGGGCAATTCTTGCCGTGGATCTTTCAAGGACAAACTCGACGAAGGCGATAACAATAAGCCTGAAGATTACTCTAAAACCTCTACCACCAACTTGTCTTCTAATTCCGACCATTCACCGAACGCTGCAGACATCATTGCTCAAGAATTCTCCAAAGACAACAACAGCAACAACAACAGCAAAGATCCAGCTCTTGTTATTCCTTTAAGAGAACCAATCATGAGGCGTAACCCAGACAATCAAGCTTACTATGTTCTTGGTCATAAGACACCAAACATTCGTGATATCTATACCCTTAGCCGCAAGCTAGGTCAAGGTCAATTTGGAACGACTTATCTATGTACAGAGATTGCCTCAGGCGTTGACTACGCTTGTAAGTCAATATCCAAGAGGAAGTTGATCTCTAAAGAAGATGTTGAGGATGTTAGAAGGGAGATTCAGATAATGCATCATTTAGCTGGTCACGGTAGTATCGTGACGATTAAAGGAGCTTATGAGGACTCTTTGTATGTTCACATTGTTATGGAGCTTTGTGCTGGAGGTGAATTGTTTGATAGGATTATTCAGAGAGGACATTATAGTGAGAGGAAAGCTGCTGAGCTGACTAAGATCATTGTCGGTGTTGTTGAAGCGTGTCATTCGCTTGGTGTGATGCATAGAGACTTGAAGCCTGAGAATTTCTTATTGGTTAATAAGGATGATGATTTCTCTCTCAAGGCTATTGATTTTGGGCTATCTGTCTTTTTCAAACCAGGTCAAATATTCACTGATGTTGTTGGAAGTCCATATTATGTTGCTCCTGAGGTTTTGCTCAAACGTTATGGGCCTGAAGCTGATGTGTGGACTGCTGGTGTTATATTGTATATATTGCTAAGCGGAGTCCCACCTTTCTGGGCAGAAACACAGCAAGGGATATTTGATGCTGTGTTGAAAGGATATATCGACTTTGAGTCAGACCCGTGGCCTGTGATATCCGACAGTGCTAAAGACTTGATCCGCAGAATGTTATCCTCCAAGCCTGCAGAACGTTTGACCGCTCATGAAGTCTTGCGTCATCCATGGATCTGTGAGAATGGTGTTGCACCAGATAGAGCACTAGATCCAGCTGTTCTTTCTCGTCTCAAGCAATTCTCTGCAATGAATAAACTAAAGAAGATGGCTTTGAAGGTTATAGCTGAGAGTCTCTCGGAAGAAGAGATAGCTGGTTTAAGAGAAATGTTTCAAGCAATGGATACTGATAACAGCGGGGCAATCACATTTGATGAACTCAAAGCTGGGCTGAGAAAATATGGATCTACCTTGAAAGACACAGAGATCCATGATCTTATGGATGCGGCTGATGTAGACAACAGTGGGACAATAGATTACAGTGAGTTCATTGCAGCGACGATCCATCTCAACAAACTAGAGCGGGAAGAGCATCTTGTTGCAGCGTTTCAATATTTTGACAAAGATGGAAGCGGTTTCATAACAATTGATGAGCTACAACAAGCGTGTGTTGAACATGGCATGGCTGATGTTTTCCTTGAAGACATCATCAAAGAAGTTGATCAAAACAATGATGGAAAGATTGATTATGGTGAGTTTGTGGAGATGATGCAAAAGGGAAATGCTGGTGTTGGAAGAAGGACGATGAGAAATAGTCTAAACATTAGCATGAGAGACGCGTAG

Protein Analysis

556

Amino Acids

62.13

Weight (kDa)

5.15

Isoelectric Point (pI)

35.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 97 - 355 5e-73 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 98 - 350 9.8e-23 Protein tyrosine and serine/threonine kinase
EF-hand_1 PF00036 403 - 429 1.5e-07 EF hand domain
EF-hand_7 PF13499 403 - 462 2.5e-13 EF-hand domain pair
EF-hand_6 PF13405 403 - 431 8.4e-07 EF-hand domain
EF-hand_7 PF13499 472 - 534 1.7e-14 EF-hand domain pair
EF-hand_6 PF13405 475 - 502 1.9e-06 EF-hand domain
EF-hand_5 PF13202 475 - 497 2.5e-06 EF hand
EF-hand_1 PF00036 476 - 499 2.4e-06 EF hand domain
EF-hand_1 PF00036 509 - 535 1.2e-07 EF hand domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 2 cut(s) 1037, 1411
AccI GTMKAC 1 cut(s) 1344
AccII CGCG 1 cut(s) 1667
AciI CCGC 8 cut(s) 301, 876, 997, 1035, 1245, 1334, 1411, 1461
AclI AACGTT 2 cut(s) 817, 1027
AclWI GGATC 8 cut(s) 28, 179, 988, 1070, 1094, 1300, 1309, 1384
AcsI RAATTY 2 cut(s) 146, 676
AcuI CTGAAG 2 cut(s) 84, 849
AfaI GTAC 1 cut(s) 343
AflIII ACRYGT 1 cut(s) 1665
AhdI GACNNNNNGTC 1 cut(s) 949
AjnI CCWGG 1 cut(s) 751
AjuI GAANNNNNNNTTGG 2 cut(s) 668, 700
Alw21I GWGCWC 1 cut(s) 1096
Alw26I GTCTC 4 cut(s) 654, 1124, 1187, 1656
AlwI GGATC 8 cut(s) 28, 179, 988, 1070, 1094, 1300, 1309, 1384
AoxI GGCC 2 cut(s) 824, 962
ApeKI GCWGC 4 cut(s) 125, 593, 1382, 1430
ApoI RAATTY 2 cut(s) 146, 676
Asp700I GAANNNNTTC 1 cut(s) 1218
AspS9I GGNCC 1 cut(s) 824
AsuHPI GGTGA 3 cut(s) 108, 554, 1592
AxyI CCTNAGG 2 cut(s) 355, 801
BaeI ACNNNNGTAYC 2 cut(s) 454, 487
BbsI GAAGAC 2 cut(s) 90, 1536
Bbv12I GWGCWC 1 cut(s) 1096
BbvI GCAGC 4 cut(s) 112, 580, 1394, 1442
BccI CCATC 4 cut(s) 1150, 1401, 1448, 1556
BciT130I CCWGG 1 cut(s) 753
BciVI GTATCC 1 cut(s) 1225
BclI TGATCA 1 cut(s) 1549
BcoDI GTCTC 4 cut(s) 654, 1124, 1187, 1656
BfaI CTAG 3 cut(s) 308, 1097, 1406
BfmI CTRYAG 2 cut(s) 126, 1020
BfuI GTATCC 1 cut(s) 1225
BisI GCNGC 6 cut(s) 126, 301, 594, 1335, 1383, 1431
BlpI GCTNAGC 2 cut(s) 597, 872
BlsI GCNGC 6 cut(s) 127, 302, 595, 1336, 1384, 1432
Bme1390I CCNGG 1 cut(s) 753
BmeRI GACNNNNNGTC 1 cut(s) 949
BmgT120I GGNCC 1 cut(s) 824
BmrFI CCNGG 1 cut(s) 753
BmsI GCATC 6 cut(s) 457, 642, 910, 1321, 1429, 1587
BpiI GAAGAC 2 cut(s) 90, 1536
BplI GAGNNNNNCTC 4 cut(s) 338, 370, 1169, 1201
BpmI CTGGAG 1 cut(s) 558
Bpu10I CCTNAGC 1 cut(s) 296
Bpu1102I GCTNAGC 2 cut(s) 597, 872
BpuEI CTTGAG 3 cut(s) 126, 698, 1106
BsaJI CCNNGG 3 cut(s) 16, 959, 1058
Bse21I CCTNAGG 2 cut(s) 355, 801
Bse3DI GCAATG 4 cut(s) 135, 1143, 1233, 1377
BseBI CCWGG 1 cut(s) 753
BseDI CCNNGG 3 cut(s) 16, 959, 1058
BseGI GGATG 4 cut(s) 427, 703, 1054, 1336
BseMI GCAATG 4 cut(s) 135, 1143, 1233, 1377
BseMII CTCAG 6 cut(s) 369, 588, 663, 792, 1167, 1271
BseXI GCAGC 4 cut(s) 112, 580, 1394, 1442
BseYI CCCAGC 1 cut(s) 1274
Bsh1236I CGCG 1 cut(s) 1667
BshFI GGCC 2 cut(s) 826, 964
BsiHKAI GWGCWC 1 cut(s) 1096
BslFI GGGAC 2 cut(s) 866, 1369
BsmAI GTCTC 4 cut(s) 654, 1124, 1187, 1656
BsmBI CGTCTC 2 cut(s) 1124, 1656
BsmFI GGGAC 2 cut(s) 866, 1369
BsnI GGCC 2 cut(s) 826, 964
Bsp1286I GDGCHC 1 cut(s) 1096
Bsp1407I TGTACA 1 cut(s) 341
Bsp1720I GCTNAGC 2 cut(s) 597, 872
Bsp19I CCATGG 1 cut(s) 1058
BspACI CCGC 8 cut(s) 301, 876, 997, 1035, 1245, 1334, 1411, 1461
BspANI GGCC 2 cut(s) 826, 964
BspCNI CTCAG 6 cut(s) 368, 589, 664, 793, 1168, 1272
BspFNI CGCG 1 cut(s) 1667
BspHI TCATGA 2 cut(s) 219, 1039
BspMAI CTGCAG 2 cut(s) 130, 1024
BspPI GGATC 8 cut(s) 28, 179, 988, 1070, 1094, 1300, 1309, 1384
BspQI GCTCTTC 1 cut(s) 1410
BsrBI CCGCTC 2 cut(s) 1037, 1411
BsrDI GCAATG 4 cut(s) 135, 1143, 1233, 1377
BsrGI TGTACA 1 cut(s) 341
BssECI CCNNGG 3 cut(s) 16, 959, 1058
BssT1I CCWWGG 1 cut(s) 1058
Bst2UI CCWGG 1 cut(s) 753
Bst4CI ACNGT 4 cut(s) 467, 980, 1352, 1370
Bst6I CTCTTC 2 cut(s) 1188, 1410
BstAPI GCANNNNNTGC 1 cut(s) 12
BstAUI TGTACA 1 cut(s) 341
BstC8I GCNNGC 2 cut(s) 305, 1020
BstDEI CTNAG 9 cut(s) 296, 355, 597, 606, 672, 801, 872, 1176, 1280
BstDSI CCRYGG 3 cut(s) 16, 959, 1058
BstF5I GGATG 4 cut(s) 427, 703, 1054, 1336
BstFNI CGCG 1 cut(s) 1667
BstMAI GTCTC 4 cut(s) 654, 1124, 1187, 1656
BstMWI GCNNNNNNNGC 2 cut(s) 12, 1417
BstNI CCWGG 1 cut(s) 753
BstSCI CCNGG 1 cut(s) 751
BstSFI CTRYAG 2 cut(s) 126, 1020
BstUI CGCG 1 cut(s) 1667
BstV1I GCAGC 4 cut(s) 112, 580, 1394, 1442
BstV2I GAAGAC 2 cut(s) 90, 1536
BstX2I RGATCY 6 cut(s) 20, 184, 1062, 1099, 1292, 1314
BstXI CCANNNNNNTGG 1 cut(s) 891
BstYI RGATCY 6 cut(s) 20, 184, 1062, 1099, 1292, 1314
Bsu36I CCTNAGG 2 cut(s) 355, 801
BsuI GTATCC 1 cut(s) 1225
BsuRI GGCC 2 cut(s) 826, 964
BtgI CCRYGG 3 cut(s) 16, 959, 1058
BtsCI GGATG 4 cut(s) 427, 703, 1054, 1336
BtsIMutI CAGTG 4 cut(s) 765, 985, 1357, 1375
Cac8I GCNNGC 2 cut(s) 305, 1020
CciI TCATGA 2 cut(s) 219, 1039
Cfr13I GGNCC 1 cut(s) 824
CseI GACGC 1 cut(s) 1040
CsiI ACCWGGT 1 cut(s) 751
Csp6I GTAC 1 cut(s) 342
CviAII CATG 7 cut(s) 220, 1040, 1059, 1319, 1505, 1510, 1657
CviQI GTAC 1 cut(s) 342
DdeI CTNAG 9 cut(s) 296, 355, 597, 606, 672, 801, 872, 1176, 1280
DriI GACNNNNNGTC 1 cut(s) 949
Eam1104I CTCTTC 2 cut(s) 1188, 1410
Eam1105I GACNNNNNGTC 1 cut(s) 949
EarI CTCTTC 2 cut(s) 1188, 1410
Eco130I CCWWGG 1 cut(s) 1058
Eco32I GATATC 2 cut(s) 286, 972
Eco57I CTGAAG 2 cut(s) 84, 849
Eco81I CCTNAGG 2 cut(s) 355, 801
EcoRI GAATTC 1 cut(s) 146
EcoRII CCWGG 1 cut(s) 751
EcoRV GATATC 2 cut(s) 286, 972
EcoT14I CCWWGG 1 cut(s) 1058
EcoT22I ATGCAT 2 cut(s) 450, 657
ErhI CCWWGG 1 cut(s) 1058
Esp3I CGTCTC 2 cut(s) 1124, 1656
FaeI CATG 7 cut(s) 223, 1043, 1062, 1322, 1508, 1513, 1660
FalI AAGNNNNNCTT 2 cut(s) 1407, 1439
FaqI GGGAC 2 cut(s) 866, 1369
FatI CATG 7 cut(s) 219, 1039, 1058, 1318, 1504, 1509, 1656
FauI CCCGC 2 cut(s) 1238, 1404
FbaI TGATCA 1 cut(s) 1549
FblI GTMKAC 1 cut(s) 1344
Fnu4HI GCNGC 6 cut(s) 126, 301, 594, 1335, 1383, 1431
FokI GGATG 4 cut(s) 434, 710, 1041, 1343
Fsp4HI GCNGC 6 cut(s) 126, 301, 594, 1335, 1383, 1431
FspBI CTAG 3 cut(s) 308, 1097, 1406
GluI GCNGC 6 cut(s) 126, 301, 594, 1335, 1383, 1431
GsaI CCCAGC 1 cut(s) 1278
GsuI CTGGAG 1 cut(s) 558
HaeIII GGCC 2 cut(s) 826, 964
HgaI GACGC 1 cut(s) 1040
Hin1II CATG 7 cut(s) 223, 1043, 1062, 1322, 1508, 1513, 1660
HincII GTYRAC 1 cut(s) 364
HindII GTYRAC 1 cut(s) 364
HindIII AAGCTT 1 cut(s) 243
HinfI GANTC 5 cut(s) 436, 500, 879, 950, 1180
HphI GGTGA 3 cut(s) 108, 554, 1592
Hpy166II GTNNAC 4 cut(s) 364, 514, 843, 1345
Hpy188I TCNGA 6 cut(s) 109, 441, 567, 955, 976, 1189
Hpy188III TCNNGA 6 cut(s) 143, 220, 281, 475, 800, 1040
Hpy8I GTNNAC 4 cut(s) 364, 514, 843, 1345
Hpy99I CGWCG 2 cut(s) 44, 1390
HpyAV CCTTC 4 cut(s) 38, 423, 1159, 1620
HpyCH4III ACNGT 4 cut(s) 467, 980, 1352, 1370
HpyCH4IV ACGT 2 cut(s) 817, 1027
HpyCH4V TGCA 9 cut(s) 128, 448, 655, 1022, 1082, 1136, 1382, 1430, 1600
HpyF10VI GCNNNNNNNGC 2 cut(s) 12, 1417
HpyF3I CTNAG 9 cut(s) 296, 355, 597, 606, 672, 801, 872, 1176, 1280
HpySE526I ACGT 2 cut(s) 817, 1027
Hsp92II CATG 7 cut(s) 223, 1043, 1062, 1322, 1508, 1513, 1660
Ksp22I TGATCA 1 cut(s) 1549
LguI GCTCTTC 1 cut(s) 1410
LmnI GCTCC 3 cut(s) 488, 526, 802
Lsp1109I GCAGC 4 cut(s) 112, 580, 1394, 1442
LweI GCATC 6 cut(s) 457, 642, 910, 1321, 1429, 1587
MabI ACCWGGT 1 cut(s) 751
MaeI CTAG 3 cut(s) 308, 1097, 1406
MaeII ACGT 2 cut(s) 817, 1027
MaeIII GTNAC 3 cut(s) 227, 461, 475
MbiI CCGCTC 2 cut(s) 1037, 1411
MboII GAAGA 9 cut(s) 77, 90, 422, 1165, 1202, 1205, 1427, 1541, 1635
MfeI CAATTG 1 cut(s) 1473
MflI RGATCY 6 cut(s) 20, 184, 1062, 1099, 1292, 1314
MhlI GDGCHC 1 cut(s) 1096
MluCI AATT 8 cut(s) 7, 103, 146, 320, 545, 676, 1127, 1473
MluI ACGCGT 1 cut(s) 1665
MlyI GAGTC 4 cut(s) 494, 888, 959, 1189
MmeI TCCRAC 4 cut(s) 132, 757, 999, 1600
Mph1103I ATGCAT 2 cut(s) 450, 657
MroXI GAANNNNTTC 1 cut(s) 1218
MseI TTAA 4 cut(s) 206, 483, 690, 1208
MslI CAYNNNNRTG 3 cut(s) 521, 579, 1655
MspA1I CMGCKG 2 cut(s) 1106, 1245
MspR9I CCNGG 1 cut(s) 753
MunI CAATTG 1 cut(s) 1473
MvaI CCWGG 1 cut(s) 753
MvnI CGCG 1 cut(s) 1667
MwoI GCNNNNNNNGC 2 cut(s) 12, 1417
NcoI CCATGG 1 cut(s) 1058
NlaIII CATG 7 cut(s) 223, 1043, 1062, 1322, 1508, 1513, 1660
NmuCI GTSAC 2 cut(s) 461, 475
NsiI ATGCAT 2 cut(s) 450, 657
PagI TCATGA 2 cut(s) 219, 1039
PciSI GCTCTTC 1 cut(s) 1410
PcsI WCGNNNNNNNCGW 2 cut(s) 45, 471
PdmI GAANNNNTTC 1 cut(s) 1218
PfeI GAWTC 1 cut(s) 436
PkrI GCNGC 6 cut(s) 127, 302, 595, 1336, 1384, 1432
PleI GAGTC 4 cut(s) 494, 887, 958, 1188
PpsI GAGTC 4 cut(s) 494, 887, 958, 1188
Psp1406I AACGTT 2 cut(s) 817, 1027
Psp6I CCWGG 1 cut(s) 751
PspFI CCCAGC 1 cut(s) 1274
PspGI CCWGG 1 cut(s) 751
PspPI GGNCC 1 cut(s) 824
PstI CTGCAG 2 cut(s) 130, 1024
PsuI RGATCY 6 cut(s) 20, 184, 1062, 1099, 1292, 1314
PvuII CAGCTG 1 cut(s) 1106
RsaI GTAC 1 cut(s) 343
RsaNI GTAC 1 cut(s) 342
RseI CAYNNNNRTG 3 cut(s) 521, 579, 1655
SapI GCTCTTC 1 cut(s) 1410
SaqAI TTAA 4 cut(s) 206, 483, 690, 1208
SatI GCNGC 6 cut(s) 126, 301, 594, 1335, 1383, 1431
Sau96I GGNCC 1 cut(s) 824
SchI GAGTC 4 cut(s) 494, 888, 959, 1189
ScrFI CCNGG 1 cut(s) 753
SduI GDGCHC 1 cut(s) 1096
SexAI ACCWGGT 1 cut(s) 751
SfaNI GCATC 6 cut(s) 457, 642, 910, 1321, 1429, 1587
SfcI CTRYAG 2 cut(s) 126, 1020
SmiMI CAYNNNNRTG 3 cut(s) 521, 579, 1655
SmlI CTYRAG 3 cut(s) 141, 713, 1121
SmoI CTYRAG 3 cut(s) 141, 713, 1121
Sse9I AATT 8 cut(s) 7, 103, 146, 320, 545, 676, 1127, 1473
SsiI CCGC 8 cut(s) 301, 876, 997, 1035, 1245, 1334, 1411, 1461
SspI AATATT 2 cut(s) 762, 1442
SspMI CTAG 3 cut(s) 308, 1097, 1406
StyD4I CCNGG 1 cut(s) 751
StyI CCWWGG 1 cut(s) 1058
TaaI ACNGT 4 cut(s) 467, 980, 1352, 1370
TaiI ACGT 2 cut(s) 820, 1030
TaqI TCGA 2 cut(s) 39, 942
TasI AATT 8 cut(s) 7, 103, 146, 320, 545, 676, 1127, 1473
TatI WGTACW 1 cut(s) 341
TauI GCSGC 2 cut(s) 303, 1337
TfiI GAWTC 1 cut(s) 436
Tru1I TTAA 4 cut(s) 206, 483, 690, 1208
Tru9I TTAA 4 cut(s) 206, 483, 690, 1208
TscAI CASTG 4 cut(s) 772, 985, 1357, 1375
TseFI GTSAC 2 cut(s) 461, 475
TseI GCWGC 4 cut(s) 125, 593, 1382, 1430
Tsp45I GTSAC 2 cut(s) 461, 475
TspDTI ATGAA 5 cut(s) 1056, 1154, 1278, 1366, 1456
TspRI CASTG 4 cut(s) 772, 985, 1357, 1375
XapI RAATTY 2 cut(s) 146, 676
XmiI GTMKAC 1 cut(s) 1344
XmnI GAANNNNTTC 1 cut(s) 1218
XspI CTAG 3 cut(s) 308, 1097, 1406
Zsp2I ATGCAT 2 cut(s) 450, 657
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.