Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6D

Orthogroup ID

OG0003972

Physical Location & Seq

Genomic Coordinates Forward (+)

43137881 .. 43141256

Gene Structure 3376 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6DG244500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1563 bp

ATGGGCAACACATGCCGTGGATCTTCCAGGGGCAAATTTTTCCTTGGCGCCAATCAGCCCGAAGAACAATCCACTGCTTCCAATACCAAGCGTAGCACCCCTACTGACCTTTCCATTTCCGATACCTCCTCAAAATCTCAAGAACTAACCAAAGGAAGCCCCAGCCCCAAGCCCAAAGACAAGAGTAACAACAATAATCTACCCCTCAGTAGTCCTAGAAAAGACAACGCCATGAGGAGAGGCCATGAGAACCAAACTTACTATGTTTTGGGCCATAAGACTGCCAACATTCGTGATCTTTATACTTTGGGTCAGAAGTTAGGACAGGGACAATTTGGGACTACTTATTTGTGCACTGAGATTTCCACCGGCTCTCAGTATGCGTGTAAGTCTATCTCCAAGAGGAAGTTGATCTCAAAGGAGGATGTGGATGACGTTAGGAGGGAGATTCAGATAATGCACCATTTGGCTGGTCACAAGAACATTGTGACTATCAAAGGTGCATATGAGGATCCGCTGTATGTTCATATTGTAATGGAGCTTTGCGCTGGGGGTGAGTTGTTTGACCGGATCATCCAGAGGGGACATTACAGTGAGAGGAAGGCAGCTGAGCTGACAAAGATTATTGTTGGGGTTGTTGAAGCTTGCCATTCACTTGGAGTTATGCATAGAGATCTGAAGCCCGAAAACTTCTTGTTGGTTAACAAGGATGATGATTTCTCACTCAAGGCCATTGATTTTGGGCTCTCAGTCTTCTTCAAACCAGAAACTCAGCAGGGAATCTTTGATGCGGTGTTGAAGGGATATATTGACTTCGAGTCAGATCCATGGCCCGTGATATCTGACAGTGCAAAAGACATTATACGGAAGATGTTATGTTCCCGGCCTAAAGACCGCTTGTCTGCTCATGAAGTTTTATGTCACCCTTGGATTTGTGAAAATGGTGTTGCTCCTGACAGAGCACTAGATCCAGCTGTACTTTCTCGTCTCAAACAGTTTTCTGCTATGAACAAGTTAAAGAAGATGGCTTTGCGGGTAATAGCTGAAAGCCTTTCTGAGGAAGAGATTGCTGGGCTGCGAGAGATGTTCAAGGCAATGGATACTGATAATAGTGGTGCAATCACATTTGATGAACTCAAAGCGGGGTTGCGAAAATATGGCTCTACCATGAAGGATGCAGAGATCCGTGATCTTATGGATGCAGCTGATGTTGACAACAGTGGGACTATTGATTATGGGGAATTTATAGCTGCTACAGTCCATCTCAACAAACTAGAACGTGAAGAACATCTTGTTGCTGCCTTCAGATACTTTGACAAGGATGGAAGTGGCTATATTACAGTTGATGAGCTCCAGCAAGCTTGTGCAGAGCATAATATGACTGACGTTCTTCTTGAAGATATTATCAAAGAAGTTGATCAAGATAATGATGGAAGAATTGACTACGGCGAATTTGTTGCCATGATGCAAAAAGGCAATGTGAAAGGCCATATAGCTATTGGAAGACGGACTATGAGGAACAGTTTGAATTTGAGCATGAGAGATGCACCAGGAGCCCTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004683 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009931 GO:0009987 GO:0010033 GO:0010119 GO:0010359 GO:0010857 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019538 GO:0022898 GO:0023052 GO:0032409 GO:0032412 GO:0032870 GO:0032879 GO:0033993 GO:0034762 GO:0034765 GO:0035556 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043269 GO:0043412 GO:0044070 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0046777 GO:0050789 GO:0050794 GO:0050896 GO:0051049 GO:0051716 GO:0065007 GO:0065009 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0071944 GO:0097305 GO:0097306 GO:0140096 GO:1901564 GO:1901700 GO:1901701 GO:1902456 GO:1903959

KEGG Pathways

Metabolic & Signaling

ko04626 ko05145 map04626 map05145

Pfam Domains

Protein Families

EF-hand_1 EF-hand_5 EF-hand_6 Pkinase

Protein Analysis

520

Amino Acids

58.04

Weight (kDa)

6.14

Isoelectric Point (pI)

39.04

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	101 - 257	8.2e-44	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	102 - 253	9.4e-17	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	266 - 311	5.6e-07	Protein kinase domain
EF-hand_1	PF00036	359 - 385	1.1e-07	EF hand domain
EF-hand_7	PF13499	359 - 418	1.5e-13	EF-hand domain pair
EF-hand_6	PF13405	359 - 387	4.6e-07	EF-hand domain
EF-hand_7	PF13499	428 - 490	2.3e-15	EF-hand domain pair
EF-hand_6	PF13405	431 - 456	3.5e-07	EF-hand domain
EF-hand_5	PF13202	431 - 453	2.6e-06	EF hand
EF-hand_1	PF00036	432 - 456	7.4e-07	EF hand domain
EF-hand_1	PF00036	465 - 491	1.8e-07	EF hand domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003972)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G17290 AT2G17290 AT4G35310 AT4G35310 AT4G38230 AT4G38230 AT4G38230 AT4G38230
fragaria_vesca	FvH4_2g16880 FvH4_2g16880 FvH4_2g16880 FvH4_2g16880 FvH4_2g16880
malus_domestica	MD05G1140300.v1.1 MD05G1140600.v1.1 MD10G1142300.v1.1
prunus_persica	Prupe.8G180800_v2.0.a1 Prupe.8G180800_v2.0.a1
pyrus_communis	pycom05g13570
rosa_chinensis	RchiOBHm_Chr6g0281011
rosa_laevigata	RLG00000013006
rosa_multiflora	Rmu_co8419211.1_g000001 Rmu_sc0012869.1_g000002
rosa_roxburghii	Rroxscaffold_7G00187390
rosa_rugosa	Rorug06G0137800 Rorug06G0137900 Rorug06G0138000 Rorug06G0138100
rosa_samantha	Rh6AG250100 Rh6BG252400 Rh6CG252800 Rh6DG244500
rosa_wichuraiana	Rw6G021630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	47
AciI	CCGC	5 cut(s)	515, 791, 895, 1033, 1142
AclWI	GGATC	7 cut(s)	28, 506, 519, 578, 818, 962, 1177
AcsI	RAATTY	4 cut(s)	35, 1241, 1451, 1528
AcuI	CTGAAG	2 cut(s)	698, 1288
AcyI	GRCGYC	1 cut(s)	48
AfaI	GTAC	1 cut(s)	978
AfiI	CCNNNNNNNGG	1 cut(s)	1057
AgsI	TTSAA	6 cut(s)	641, 760, 799, 1090, 1397, 1528
AhdI	GACNNNNNGTC	2 cut(s)	817, 898
AjnI	CCWGG	2 cut(s)	26, 1549
Alw21I	GWGCWC	3 cut(s)	356, 964, 1353
Alw26I	GTCTC	1 cut(s)	992
Alw44I	GTGCAC	1 cut(s)	352
AlwI	GGATC	7 cut(s)	28, 506, 519, 578, 818, 962, 1177
AoxI	GGCC	6 cut(s)	241, 271, 729, 830, 884, 1486
ApaLI	GTGCAC	1 cut(s)	352
ApeKI	GCWGC	5 cut(s)	605, 1075, 1202, 1250, 1298
ApoI	RAATTY	4 cut(s)	35, 1241, 1451, 1528
ArsI	GACNNNNNNTTYG	2 cut(s)	331, 363
AspLEI	GCGC	2 cut(s)	50, 548
AspS9I	GGNCC	2 cut(s)	271, 831
AsuC2I	CCSGG	1 cut(s)	883
AsuHPI	GGTGA	2 cut(s)	566, 914
BaeGI	GKGCMC	1 cut(s)	356
BamHI	GGATCC	1 cut(s)	511
BanI	GGYRCC	1 cut(s)	47
BanII	GRGCYC	3 cut(s)	747, 1353, 1558
BbsI	GAAGAC	2 cut(s)	745, 1510
Bbv12I	GWGCWC	3 cut(s)	356, 964, 1353
BbvI	GCAGC	5 cut(s)	617, 1062, 1214, 1237, 1285
BccI	CCATC	4 cut(s)	1018, 1269, 1316, 1424
BceAI	ACGGC	1 cut(s)	1462
BcgI	CGANNNNNNTGC	2 cut(s)	1439, 1473
BciT130I	CCWGG	2 cut(s)	28, 1551
BciVI	GTATCC	1 cut(s)	1093
BclI	TGATCA	1 cut(s)	1417
BcnI	CCSGG	1 cut(s)	883
BcoDI	GTCTC	1 cut(s)	992
BfaI	CTAG	3 cut(s)	216, 965, 1274
BfmI	CTRYAG	1 cut(s)	1254
BfoI	RGCGCY	1 cut(s)	51
BfuI	GTATCC	1 cut(s)	1093
BglII	AGATCT	1 cut(s)	673
BisI	GCNGC	5 cut(s)	606, 1076, 1203, 1251, 1299
BlpI	GCTNAGC	1 cut(s)	609
BlsI	GCNGC	5 cut(s)	607, 1077, 1204, 1252, 1300
Bme1390I	CCNGG	3 cut(s)	28, 883, 1551
BmeRI	GACNNNNNGTC	2 cut(s)	817, 898
BmgT120I	GGNCC	2 cut(s)	271, 831
BmiI	GGNNCC	3 cut(s)	49, 513, 1555
BmrFI	CCNGG	3 cut(s)	28, 883, 1551
BmsI	GCATC	5 cut(s)	778, 1165, 1189, 1455, 1534
BpiI	GAAGAC	2 cut(s)	745, 1510
BpmI	CTGGAG	1 cut(s)	1337
Bpu1102I	GCTNAGC	1 cut(s)	609
BpuEI	CTTGAG	2 cut(s)	123, 710
BpuMI	CCSGG	1 cut(s)	883
BsaHI	GRCGYC	1 cut(s)	48
BsaJI	CCNNGG	5 cut(s)	16, 27, 43, 827, 926
BsaWI	WCCGGW	1 cut(s)	567
Bsc4I	CCNNNNNNNGG	1 cut(s)	1057
Bse118I	RCCGGY	1 cut(s)	368
Bse3DI	GCAATG	2 cut(s)	1101, 1483
BseBI	CCWGG	2 cut(s)	28, 1551
BseDI	CCNNGG	5 cut(s)	16, 27, 43, 827, 926
BseGI	GGATG	7 cut(s)	430, 436, 573, 715, 1180, 1204, 1327
BseLI	CCNNNNNNNGG	1 cut(s)	1057
BseMI	GCAATG	2 cut(s)	1101, 1483
BseMII	CTCAG	7 cut(s)	220, 348, 389, 600, 762, 785, 1047
BseRI	GAGGAG	2 cut(s)	118, 250
BseSI	GKGCMC	1 cut(s)	356
BseXI	GCAGC	5 cut(s)	617, 1062, 1214, 1237, 1285
BseYI	CCCAGC	3 cut(s)	161, 548, 1070
BsgI	GTGCAG	1 cut(s)	1386
BshFI	GGCC	6 cut(s)	243, 273, 731, 832, 886, 1488
BshNI	GGYRCC	1 cut(s)	47
BsiHKAI	GWGCWC	3 cut(s)	356, 964, 1353
BsiSI	CCGG	3 cut(s)	369, 568, 883
BslFI	GGGAC	4 cut(s)	342, 352, 597, 1237
BslI	CCNNNNNNNGG	1 cut(s)	1057
BsmAI	GTCTC	1 cut(s)	992
BsmBI	CGTCTC	1 cut(s)	992
BsmFI	GGGAC	4 cut(s)	342, 352, 597, 1237
BsnI	GGCC	6 cut(s)	243, 273, 731, 832, 886, 1488
Bsp1286I	GDGCHC	5 cut(s)	356, 747, 964, 1353, 1558
Bsp1720I	GCTNAGC	1 cut(s)	609
Bsp19I	CCATGG	1 cut(s)	827
BspACI	CCGC	5 cut(s)	515, 791, 895, 1033, 1142
BspANI	GGCC	6 cut(s)	243, 273, 731, 832, 886, 1488
BspCNI	CTCAG	7 cut(s)	219, 349, 388, 601, 761, 784, 1048
BspHI	TCATGA	1 cut(s)	907
BspLI	GGNNCC	3 cut(s)	49, 513, 1555
BspPI	GGATC	7 cut(s)	28, 506, 519, 578, 818, 962, 1177
BspT107I	GGYRCC	1 cut(s)	47
BsrDI	GCAATG	2 cut(s)	1101, 1483
BsrFI	RCCGGY	1 cut(s)	368
BssAI	RCCGGY	1 cut(s)	368
BssECI	CCNNGG	5 cut(s)	16, 27, 43, 827, 926
BssNI	GRCGYC	1 cut(s)	48
BssT1I	CCWWGG	3 cut(s)	43, 827, 926
Bst2UI	CCWGG	2 cut(s)	28, 1551
Bst4CI	ACNGT	7 cut(s)	593, 848, 996, 1220, 1258, 1342, 1523
Bst6I	CTCTTC	1 cut(s)	1056
BstACI	GRCGYC	1 cut(s)	48
BstAPI	GCANNNNNTGC	1 cut(s)	12
BstC8I	GCNNGC	2 cut(s)	646, 1359
BstDEI	CTNAG	7 cut(s)	206, 357, 375, 609, 748, 771, 1056
BstDSI	CCRYGG	2 cut(s)	16, 827
BstENI	CCTNNNNNAGG	1 cut(s)	1055
BstF5I	GGATG	7 cut(s)	430, 436, 573, 715, 1180, 1204, 1327
BstH2I	RGCGCY	1 cut(s)	51
BstHHI	GCGC	2 cut(s)	50, 548
BstMAI	GTCTC	1 cut(s)	992
BstMWI	GCNNNNNNNGC	2 cut(s)	12, 1553
BstNI	CCWGG	2 cut(s)	28, 1551
BstNSI	RCATGY	1 cut(s)	15
BstSCI	CCNGG	3 cut(s)	26, 881, 1549
BstSFI	CTRYAG	1 cut(s)	1254
BstSLI	GKGCMC	1 cut(s)	356
BstV1I	GCAGC	5 cut(s)	617, 1062, 1214, 1237, 1285
BstV2I	GAAGAC	2 cut(s)	745, 1510
BstX2I	RGATCY	6 cut(s)	20, 511, 673, 823, 967, 1182
BstXI	CCANNNNNNTGG	2 cut(s)	470, 656
BstYI	RGATCY	6 cut(s)	20, 511, 673, 823, 967, 1182
BsuI	GTATCC	1 cut(s)	1093
BsuRI	GGCC	6 cut(s)	243, 273, 731, 832, 886, 1488
BtgI	CCRYGG	2 cut(s)	16, 827
BtsCI	GGATG	7 cut(s)	430, 436, 573, 715, 1180, 1204, 1327
BtsI	GCAGTG	1 cut(s)	72
BtsIMutI	CAGTG	5 cut(s)	72, 354, 598, 853, 1225
Cac8I	GCNNGC	2 cut(s)	646, 1359
CciI	TCATGA	1 cut(s)	907
CfoI	GCGC	2 cut(s)	50, 548
Cfr10I	RCCGGY	1 cut(s)	368
Cfr13I	GGNCC	2 cut(s)	271, 831
Csp6I	GTAC	1 cut(s)	977
CviAII	CATG	8 cut(s)	12, 232, 245, 828, 908, 1168, 1462, 1537
CviQI	GTAC	1 cut(s)	977
DdeI	CTNAG	7 cut(s)	206, 357, 375, 609, 748, 771, 1056
DinI	GGCGCC	1 cut(s)	49
DriI	GACNNNNNGTC	2 cut(s)	817, 898
Eam1104I	CTCTTC	1 cut(s)	1056
Eam1105I	GACNNNNNGTC	2 cut(s)	817, 898
EarI	CTCTTC	1 cut(s)	1056
Ecl136II	GAGCTC	1 cut(s)	1351
Eco130I	CCWWGG	3 cut(s)	43, 827, 926
Eco24I	GRGCYC	3 cut(s)	747, 1353, 1558
Eco32I	GATATC	1 cut(s)	840
Eco53kI	GAGCTC	1 cut(s)	1351
Eco57I	CTGAAG	2 cut(s)	698, 1288
EcoICRI	GAGCTC	1 cut(s)	1351
EcoNI	CCTNNNNNAGG	1 cut(s)	1055
EcoRII	CCWGG	2 cut(s)	26, 1549
EcoRV	GATATC	1 cut(s)	840
EcoT14I	CCWWGG	3 cut(s)	43, 827, 926
EcoT22I	ATGCAT	1 cut(s)	669
EcoT38I	GRGCYC	3 cut(s)	747, 1353, 1558
EgeI	GGCGCC	1 cut(s)	49
EheI	GGCGCC	1 cut(s)	49
ErhI	CCWWGG	3 cut(s)	43, 827, 926
Esp3I	CGTCTC	1 cut(s)	992
FaeI	CATG	8 cut(s)	15, 235, 248, 831, 911, 1171, 1465, 1540
FalI	AAGNNNNNCTT	2 cut(s)	1275, 1307
FaqI	GGGAC	4 cut(s)	342, 352, 597, 1237
FatI	CATG	8 cut(s)	11, 231, 244, 827, 907, 1167, 1461, 1536
FauI	CCCGC	2 cut(s)	1026, 1135
FauNDI	CATATG	1 cut(s)	505
FbaI	TGATCA	1 cut(s)	1417
Fnu4HI	GCNGC	5 cut(s)	606, 1076, 1203, 1251, 1299
FokI	GGATG	7 cut(s)	437, 443, 560, 722, 1187, 1211, 1334
FriOI	GRGCYC	3 cut(s)	747, 1353, 1558
Fsp4HI	GCNGC	5 cut(s)	606, 1076, 1203, 1251, 1299
FspBI	CTAG	3 cut(s)	216, 965, 1274
GlaI	GCGC	2 cut(s)	49, 547
GluI	GCNGC	5 cut(s)	606, 1076, 1203, 1251, 1299
GsaI	CCCAGC	3 cut(s)	165, 552, 1074
GsuI	CTGGAG	1 cut(s)	1337
HaeII	RGCGCY	1 cut(s)	51
HaeIII	GGCC	6 cut(s)	243, 273, 731, 832, 886, 1488
HapII	CCGG	3 cut(s)	369, 568, 883
HhaI	GCGC	2 cut(s)	50, 548
Hin1I	GRCGYC	1 cut(s)	48
Hin1II	CATG	8 cut(s)	15, 235, 248, 831, 911, 1171, 1465, 1540
Hin6I	GCGC	2 cut(s)	48, 546
HinP1I	GCGC	2 cut(s)	48, 546
HincII	GTYRAC	2 cut(s)	703, 1213
HindII	GTYRAC	2 cut(s)	703, 1213
HindIII	AAGCTT	2 cut(s)	642, 1359
HinfI	GANTC	3 cut(s)	448, 780, 818
HpaI	GTTAAC	1 cut(s)	703
HpaII	CCGG	3 cut(s)	369, 568, 883
HphI	GGTGA	2 cut(s)	566, 914
Hpy166II	GTNNAC	3 cut(s)	354, 703, 1213
Hpy188I	TCNGA	8 cut(s)	121, 315, 453, 678, 823, 844, 1057, 1307
Hpy188III	TCNNGA	7 cut(s)	140, 293, 577, 908, 953, 1394, 1421
Hpy8I	GTNNAC	3 cut(s)	354, 703, 1213
HpyAV	CCTTC	4 cut(s)	595, 793, 1165, 1312
HpyCH4III	ACNGT	7 cut(s)	593, 848, 996, 1220, 1258, 1342, 1523
HpyCH4IV	ACGT	3 cut(s)	435, 1279, 1386
HpyF10VI	GCNNNNNNNGC	2 cut(s)	12, 1553
HpyF3I	CTNAG	7 cut(s)	206, 357, 375, 609, 748, 771, 1056
HpySE526I	ACGT	3 cut(s)	435, 1279, 1386
Hsp92I	GRCGYC	1 cut(s)	48
Hsp92II	CATG	8 cut(s)	15, 235, 248, 831, 911, 1171, 1465, 1540
HspAI	GCGC	2 cut(s)	48, 546
KasI	GGCGCC	1 cut(s)	47
Ksp22I	TGATCA	1 cut(s)	1417
KspAI	GTTAAC	1 cut(s)	703
LmnI	GCTCC	4 cut(s)	538, 955, 1356, 1553
Lsp1109I	GCAGC	5 cut(s)	617, 1062, 1214, 1237, 1285
LweI	GCATC	5 cut(s)	778, 1165, 1189, 1455, 1534
MaeI	CTAG	3 cut(s)	216, 965, 1274
MaeII	ACGT	3 cut(s)	435, 1279, 1386
MaeIII	GTNAC	4 cut(s)	185, 473, 487, 920
MflI	RGATCY	6 cut(s)	20, 511, 673, 823, 967, 1182
MhlI	GDGCHC	5 cut(s)	356, 747, 964, 1353, 1558
MluCI	AATT	6 cut(s)	35, 332, 1241, 1437, 1451, 1528
Mly113I	GGCGCC	1 cut(s)	48
MlyI	GAGTC	1 cut(s)	827
Mph1103I	ATGCAT	1 cut(s)	669
MseI	TTAA	2 cut(s)	702, 1016
MslI	CAYNNNNRTG	1 cut(s)	591
MspA1I	CMGCKG	4 cut(s)	517, 608, 974, 1205
MspI	CCGG	3 cut(s)	369, 568, 883
MspR9I	CCNGG	3 cut(s)	28, 883, 1551
MvaI	CCWGG	2 cut(s)	28, 1551
MwoI	GCNNNNNNNGC	2 cut(s)	12, 1553
NarI	GGCGCC	1 cut(s)	48
NciI	CCSGG	1 cut(s)	883
NcoI	CCATGG	1 cut(s)	827
NdeI	CATATG	1 cut(s)	505
NlaIII	CATG	8 cut(s)	15, 235, 248, 831, 911, 1171, 1465, 1540
NlaIV	GGNNCC	3 cut(s)	49, 513, 1555
NmuCI	GTSAC	3 cut(s)	473, 487, 920
NsiI	ATGCAT	1 cut(s)	669
NspI	RCATGY	1 cut(s)	15
PagI	TCATGA	1 cut(s)	907
PfeI	GAWTC	2 cut(s)	448, 780
PkrI	GCNGC	5 cut(s)	607, 1077, 1204, 1252, 1300
PleI	GAGTC	1 cut(s)	826
PluTI	GGCGCC	1 cut(s)	51
PpsI	GAGTC	1 cut(s)	826
Psp124BI	GAGCTC	1 cut(s)	1353
Psp6I	CCWGG	2 cut(s)	26, 1549
PspFI	CCCAGC	3 cut(s)	161, 548, 1070
PspGI	CCWGG	2 cut(s)	26, 1549
PspN4I	GGNNCC	3 cut(s)	49, 513, 1555
PspPI	GGNCC	2 cut(s)	271, 831
PsrI	GAACNNNNNNTAC	2 cut(s)	242, 274
PsuI	RGATCY	6 cut(s)	20, 511, 673, 823, 967, 1182
PvuII	CAGCTG	3 cut(s)	608, 974, 1205
RsaI	GTAC	1 cut(s)	978
RsaNI	GTAC	1 cut(s)	977
RseI	CAYNNNNRTG	1 cut(s)	591
SacI	GAGCTC	1 cut(s)	1353
SaqAI	TTAA	2 cut(s)	702, 1016
SatI	GCNGC	5 cut(s)	606, 1076, 1203, 1251, 1299
Sau96I	GGNCC	2 cut(s)	271, 831
SchI	GAGTC	1 cut(s)	827
ScrFI	CCNGG	3 cut(s)	28, 883, 1551
SduI	GDGCHC	5 cut(s)	356, 747, 964, 1353, 1558
SfaNI	GCATC	5 cut(s)	778, 1165, 1189, 1455, 1534
SfcI	CTRYAG	1 cut(s)	1254
SfoI	GGCGCC	1 cut(s)	49
SmiMI	CAYNNNNRTG	1 cut(s)	591
SmlI	CTYRAG	2 cut(s)	138, 725
SmoI	CTYRAG	2 cut(s)	138, 725
Sse9I	AATT	6 cut(s)	35, 332, 1241, 1437, 1451, 1528
SsiI	CCGC	5 cut(s)	515, 791, 895, 1033, 1142
SspDI	GGCGCC	1 cut(s)	47
SspMI	CTAG	3 cut(s)	216, 965, 1274
SstI	GAGCTC	1 cut(s)	1353
StyD4I	CCNGG	3 cut(s)	26, 881, 1549
StyI	CCWWGG	3 cut(s)	43, 827, 926
TaaI	ACNGT	7 cut(s)	593, 848, 996, 1220, 1258, 1342, 1523
TaiI	ACGT	3 cut(s)	438, 1282, 1389
TaqI	TCGA	1 cut(s)	816
TasI	AATT	6 cut(s)	35, 332, 1241, 1437, 1451, 1528
TatI	WGTACW	1 cut(s)	976
TfiI	GAWTC	2 cut(s)	448, 780
Tru1I	TTAA	2 cut(s)	702, 1016
Tru9I	TTAA	2 cut(s)	702, 1016
TscAI	CASTG	5 cut(s)	79, 361, 598, 853, 1225
TseFI	GTSAC	3 cut(s)	473, 487, 920
TseI	GCWGC	5 cut(s)	605, 1075, 1202, 1250, 1298
Tsp45I	GTSAC	3 cut(s)	473, 487, 920
TspDTI	ATGAA	5 cut(s)	515, 924, 1022, 1146, 1184
TspGWI	ACGGA	3 cut(s)	880, 1175, 1522
TspRI	CASTG	5 cut(s)	79, 361, 598, 853, 1225
VneI	GTGCAC	1 cut(s)	352
XagI	CCTNNNNNAGG	1 cut(s)	1055
XapI	RAATTY	4 cut(s)	35, 1241, 1451, 1528
XceI	RCATGY	1 cut(s)	15
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1496
XspI	CTAG	3 cut(s)	216, 965, 1274
Zsp2I	ATGCAT	1 cut(s)	669

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.