Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0003972

Physical Location & Seq

Genomic Coordinates Forward (+)

43041214 .. 43046152

Gene Structure 4939 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G021630.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1707 bp

ATGGGCAACACATGCCGTGGATCTTCCAGGGGCAAATTTTTCCTTGGCGCCAATCAGCCCGAAGAACAATCCACTGCTTCCAATACCAAGCGTAGCACCCCGACTGACCTTTCCATTTCCGATACCTCCTCAAAATCTCAAGAACTAACCAAAGGAAGCCCCAGCCCCAAACCCAAAGACAAGAGTAACAACAATAATCTACCCCTCAGTAGTCCTAGAAAAGACAACGCCATGAGGAGAGGCCACGAGAACCAAACTTACTATGTTTTGGGCCATAAGACTGCCAACATTCGTGATCTTTACACTTTGGGTCATAAGTTAGGACAGGGACAATTCGGGACTACTTATTTGTGCACCGAGATTTCAACCGGCTCTCAGTATGCGTGTAAGTCTATCTCCAAGAGGAAGTTGATCTCAAAGGAGGATGTGGATGACGTTAGGAGGGAGATTCAGATAATGCACCATTTGGCTGGTCACAAGAACATTGTGACTATCAAAGGTGCATATGAGGACCCGCTGTATGTTCATATTGTGATGGAGCTTTGCGCTGGGGGTGAGTTGTTTGACCGGATCATCCAGAGGGGACATTACAGTGAGAGGAAGGCAGCTGAGCTGACAAAGATTATTGTTGGGGTTGTTGAAGCTTGCCATTCACTTGGAGTTATGCATAGGGATCTGAAGCCCGAAAACTTCTTGCTGGTTAACAAGGATGATGATTTCTCACTCAAGGCCATTGATTTTGGGCTCTCAGTCTTCTTCAAACCAGGTCAAGTTTTCACTGATGTGGTTGGAAGCCCATACTACGTTGCTCCTGAAGTACTCCTCAAGCATTATGGACCAGAAGCGGATGTGTGGACTGCTGGCGTCATACTATATATTTTGCTAAGTGGCGTGCCGCCATTTTGGGCAGAAACTCAGCAGGGAATCTTTGATGCGGTGTTGAAGGGATATATTGACTTCGAGTCAGATCCATGGCCCGTGATATCTGACAGTGCAAAAGACATTATACGGAAGATGTTATGTTCCCGGCCTAAAGACCGCTTGTCTGCTCATGAAGTTTTATGTCACCCTTGGATTTGTGAAAATGGTGTTGCTCCTGACAGAGCACTAGATCCAGCTGTACTTTCTCGTCTCAAACAGTTTTCTGCTATGAACAAGTTAAAGAAGATGGCTTTGCGGGTAATAGCTGAAAGCCTTTCTGAGGAAGAGATTGCTGGGCTGCGAGAGATGTTCAAGGCAATGGATACTGATAATAGTGGTGCAATCACGTTTGATGAACTCAAAGCGGGGTTGCGAAAATATGGCTCTACCATGAAGGATGCAGAGATCCGTGATCTTATGGATGCAGCTGATGTTGACAACAGTGGGACTATTGATTATGGGGAATTTATAGCTGCTACAGTCCATCTCAACAAACTAGAACGTGAAGAACATCTTGTTGCTGCCTTCAGATACTTTGACAAGGATGGAAGTGGCTATATTACAGTTGATGAGCTCCAGCAAGCTTGTGCAGAGCATAATATGACTGACGTTCTTCTTGAAGATATTATCAAAGAAGTTGATCAAGATAATGATGGAAGAATTGACTACGGTGAATTTGTTGCCATGATGCAAAAAGGCAATGTGAAAGGCCATATAGCTATTGGAAGACGGACTATGAGGAACAGTTTGAATTTGAGCATGAGAGATGCACCAGGAGCCCTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004683 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009931 GO:0009987 GO:0010033 GO:0010119 GO:0010359 GO:0010857 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019538 GO:0022898 GO:0023052 GO:0032409 GO:0032412 GO:0032870 GO:0032879 GO:0033993 GO:0034762 GO:0034765 GO:0035556 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043269 GO:0043412 GO:0044070 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0046777 GO:0050789 GO:0050794 GO:0050896 GO:0051049 GO:0051716 GO:0065007 GO:0065009 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0071944 GO:0097305 GO:0097306 GO:0140096 GO:1901564 GO:1901700 GO:1901701 GO:1902456 GO:1903959

KEGG Pathways

Metabolic & Signaling

ko04626 ko05145 map04626 map05145

Pfam Domains

Protein Families

EF-hand_1 EF-hand_5 EF-hand_6 Pkinase

Protein Analysis

568

Amino Acids

63.27

Weight (kDa)

5.98

Isoelectric Point (pI)

39.84

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	101 - 359	1.8e-75	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	102 - 353	2.9e-23	Protein tyrosine and serine/threonine kinase
EF-hand_1	PF00036	407 - 433	1.2e-07	EF hand domain
EF-hand_7	PF13499	407 - 466	1.7e-13	EF-hand domain pair
EF-hand_6	PF13405	407 - 435	5.1e-07	EF-hand domain
EF-hand_7	PF13499	476 - 538	2.6e-15	EF-hand domain pair
EF-hand_6	PF13405	479 - 504	3.9e-07	EF-hand domain
EF-hand_5	PF13202	479 - 501	2.9e-06	EF hand
EF-hand_1	PF00036	480 - 504	8.3e-07	EF hand domain
EF-hand_1	PF00036	513 - 539	2e-07	EF hand domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0003972)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G17290 AT2G17290 AT4G35310 AT4G35310 AT4G38230 AT4G38230 AT4G38230 AT4G38230
fragaria_vesca	FvH4_2g16880 FvH4_2g16880 FvH4_2g16880 FvH4_2g16880 FvH4_2g16880
malus_domestica	MD05G1140300.v1.1 MD05G1140600.v1.1 MD10G1142300.v1.1
prunus_persica	Prupe.8G180800_v2.0.a1 Prupe.8G180800_v2.0.a1
pyrus_communis	pycom05g13570
rosa_chinensis	RchiOBHm_Chr6g0281011
rosa_laevigata	RLG00000013006
rosa_multiflora	Rmu_co8419211.1_g000001 Rmu_sc0012869.1_g000002
rosa_roxburghii	Rroxscaffold_7G00187390
rosa_rugosa	Rorug06G0137800 Rorug06G0137900 Rorug06G0138000 Rorug06G0138100
rosa_samantha	Rh6AG250100 Rh6BG252400 Rh6CG252800 Rh6DG244500
rosa_wichuraiana	Rw6G021630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	47
AciI	CCGC	7 cut(s)	515, 845, 896, 935, 1039, 1177, 1286
AclWI	GGATC	6 cut(s)	28, 578, 681, 962, 1106, 1321
AcsI	RAATTY	4 cut(s)	35, 1385, 1595, 1672
AcuI	CTGAAG	3 cut(s)	698, 834, 1432
AcyI	GRCGYC	2 cut(s)	48, 864
AfaI	GTAC	2 cut(s)	819, 1122
AfiI	CCNNNNNNNGG	1 cut(s)	1201
AgsI	TTSAA	7 cut(s)	366, 641, 760, 943, 1234, 1541, 1672
AhdI	GACNNNNNGTC	2 cut(s)	961, 1042
AjnI	CCWGG	3 cut(s)	26, 763, 1693
AleI	CACNNNNGTG	1 cut(s)	782
Alw21I	GWGCWC	3 cut(s)	356, 1108, 1497
Alw26I	GTCTC	1 cut(s)	1136
Alw44I	GTGCAC	1 cut(s)	352
AlwI	GGATC	6 cut(s)	28, 578, 681, 962, 1106, 1321
AoxI	GGCC	6 cut(s)	241, 271, 729, 974, 1028, 1630
ApaLI	GTGCAC	1 cut(s)	352
ApeKI	GCWGC	5 cut(s)	605, 1219, 1346, 1394, 1442
ApoI	RAATTY	4 cut(s)	35, 1385, 1595, 1672
ArsI	GACNNNNNNTTYG	2 cut(s)	331, 363
AspLEI	GCGC	2 cut(s)	50, 548
AspS9I	GGNCC	4 cut(s)	271, 511, 836, 975
AsuC2I	CCSGG	1 cut(s)	1027
AsuHPI	GGTGA	3 cut(s)	566, 1058, 1604
AvaII	GGWCC	2 cut(s)	511, 836
BaeGI	GKGCMC	1 cut(s)	356
BanI	GGYRCC	1 cut(s)	47
BanII	GRGCYC	3 cut(s)	747, 1497, 1702
BauI	CACGAG	1 cut(s)	245
BbsI	GAAGAC	2 cut(s)	745, 1654
Bbv12I	GWGCWC	3 cut(s)	356, 1108, 1497
BbvI	GCAGC	5 cut(s)	617, 1206, 1358, 1381, 1429
BccI	CCATC	5 cut(s)	529, 1162, 1413, 1460, 1568
BciT130I	CCWGG	3 cut(s)	28, 765, 1695
BciVI	GTATCC	1 cut(s)	1237
BclI	TGATCA	1 cut(s)	1561
BcnI	CCSGG	1 cut(s)	1027
BcoDI	GTCTC	1 cut(s)	1136
BfaI	CTAG	3 cut(s)	216, 1109, 1418
BfmI	CTRYAG	1 cut(s)	1398
BfoI	RGCGCY	1 cut(s)	51
BfuI	GTATCC	1 cut(s)	1237
BisI	GCNGC	6 cut(s)	606, 896, 1220, 1347, 1395, 1443
BlpI	GCTNAGC	1 cut(s)	609
BlsI	GCNGC	6 cut(s)	607, 897, 1221, 1348, 1396, 1444
BmcAI	AGTACT	1 cut(s)	819
Bme1390I	CCNGG	4 cut(s)	28, 765, 1027, 1695
Bme18I	GGWCC	2 cut(s)	511, 836
BmeRI	GACNNNNNGTC	2 cut(s)	961, 1042
BmgT120I	GGNCC	4 cut(s)	271, 511, 836, 975
BmiI	GGNNCC	3 cut(s)	49, 513, 1699
BmrFI	CCNGG	4 cut(s)	28, 765, 1027, 1695
BmsI	GCATC	5 cut(s)	922, 1309, 1333, 1599, 1678
BpiI	GAAGAC	2 cut(s)	745, 1654
BpmI	CTGGAG	1 cut(s)	1481
Bpu1102I	GCTNAGC	1 cut(s)	609
BpuEI	CTTGAG	3 cut(s)	123, 710, 809
BpuMI	CCSGG	1 cut(s)	1027
BsaHI	GRCGYC	2 cut(s)	48, 864
BsaJI	CCNNGG	5 cut(s)	16, 27, 43, 971, 1070
BsaWI	WCCGGW	1 cut(s)	567
Bsc4I	CCNNNNNNNGG	1 cut(s)	1201
Bse118I	RCCGGY	1 cut(s)	368
Bse3DI	GCAATG	2 cut(s)	1245, 1627
BseBI	CCWGG	3 cut(s)	28, 765, 1695
BseDI	CCNNGG	5 cut(s)	16, 27, 43, 971, 1070
BseGI	GGATG	8 cut(s)	430, 436, 573, 715, 853, 1324, 1348, 1471
BseLI	CCNNNNNNNGG	1 cut(s)	1201
BseMI	GCAATG	2 cut(s)	1245, 1627
BseMII	CTCAG	6 cut(s)	220, 389, 600, 762, 929, 1191
BseRI	GAGGAG	3 cut(s)	118, 250, 812
BseSI	GKGCMC	1 cut(s)	356
BseXI	GCAGC	5 cut(s)	617, 1206, 1358, 1381, 1429
BseYI	CCCAGC	3 cut(s)	161, 548, 1214
BsgI	GTGCAG	1 cut(s)	1530
BshFI	GGCC	6 cut(s)	243, 273, 731, 976, 1030, 1632
BshNI	GGYRCC	1 cut(s)	47
BsiHKAI	GWGCWC	3 cut(s)	356, 1108, 1497
BsiSI	CCGG	3 cut(s)	369, 568, 1027
BslFI	GGGAC	4 cut(s)	342, 352, 597, 1381
BslI	CCNNNNNNNGG	1 cut(s)	1201
BsmAI	GTCTC	1 cut(s)	1136
BsmBI	CGTCTC	1 cut(s)	1136
BsmFI	GGGAC	4 cut(s)	342, 352, 597, 1381
BsnI	GGCC	6 cut(s)	243, 273, 731, 976, 1030, 1632
Bsp1286I	GDGCHC	5 cut(s)	356, 747, 1108, 1497, 1702
Bsp1720I	GCTNAGC	1 cut(s)	609
Bsp19I	CCATGG	1 cut(s)	971
BspACI	CCGC	7 cut(s)	515, 845, 896, 935, 1039, 1177, 1286
BspANI	GGCC	6 cut(s)	243, 273, 731, 976, 1030, 1632
BspCNI	CTCAG	6 cut(s)	219, 388, 601, 761, 928, 1192
BspHI	TCATGA	1 cut(s)	1051
BspLI	GGNNCC	3 cut(s)	49, 513, 1699
BspPI	GGATC	6 cut(s)	28, 578, 681, 962, 1106, 1321
BspT107I	GGYRCC	1 cut(s)	47
BsrDI	GCAATG	2 cut(s)	1245, 1627
BsrFI	RCCGGY	1 cut(s)	368
BssAI	RCCGGY	1 cut(s)	368
BssECI	CCNNGG	5 cut(s)	16, 27, 43, 971, 1070
BssNI	GRCGYC	2 cut(s)	48, 864
BssSI	CACGAG	1 cut(s)	245
BssT1I	CCWWGG	3 cut(s)	43, 971, 1070
Bst2BI	CACGAG	1 cut(s)	245
Bst2UI	CCWGG	3 cut(s)	28, 765, 1695
Bst4CI	ACNGT	8 cut(s)	593, 992, 1140, 1364, 1402, 1486, 1592, 1667
Bst6I	CTCTTC	1 cut(s)	1200
BstACI	GRCGYC	2 cut(s)	48, 864
BstAPI	GCANNNNNTGC	1 cut(s)	12
BstC8I	GCNNGC	4 cut(s)	646, 862, 893, 1503
BstDEI	CTNAG	7 cut(s)	206, 375, 609, 748, 884, 915, 1200
BstDSI	CCRYGG	2 cut(s)	16, 971
BstENI	CCTNNNNNAGG	1 cut(s)	1199
BstF5I	GGATG	8 cut(s)	430, 436, 573, 715, 853, 1324, 1348, 1471
BstH2I	RGCGCY	1 cut(s)	51
BstHHI	GCGC	2 cut(s)	50, 548
BstMAI	GTCTC	1 cut(s)	1136
BstMWI	GCNNNNNNNGC	2 cut(s)	12, 1697
BstNI	CCWGG	3 cut(s)	28, 765, 1695
BstNSI	RCATGY	1 cut(s)	15
BstSCI	CCNGG	4 cut(s)	26, 763, 1025, 1693
BstSFI	CTRYAG	1 cut(s)	1398
BstSLI	GKGCMC	1 cut(s)	356
BstV1I	GCAGC	5 cut(s)	617, 1206, 1358, 1381, 1429
BstV2I	GAAGAC	2 cut(s)	745, 1654
BstX2I	RGATCY	5 cut(s)	20, 673, 967, 1111, 1326
BstXI	CCANNNNNNTGG	2 cut(s)	470, 656
BstYI	RGATCY	5 cut(s)	20, 673, 967, 1111, 1326
BsuI	GTATCC	1 cut(s)	1237
BsuRI	GGCC	6 cut(s)	243, 273, 731, 976, 1030, 1632
BtgI	CCRYGG	2 cut(s)	16, 971
BtsCI	GGATG	8 cut(s)	430, 436, 573, 715, 853, 1324, 1348, 1471
BtsI	GCAGTG	1 cut(s)	72
BtsIMutI	CAGTG	5 cut(s)	72, 598, 777, 997, 1369
Cac8I	GCNNGC	4 cut(s)	646, 862, 893, 1503
CciI	TCATGA	1 cut(s)	1051
CfoI	GCGC	2 cut(s)	50, 548
Cfr10I	RCCGGY	1 cut(s)	368
Cfr13I	GGNCC	4 cut(s)	271, 511, 836, 975
CseI	GACGC	1 cut(s)	853
CsiI	ACCWGGT	1 cut(s)	763
Csp6I	GTAC	2 cut(s)	818, 1121
CviAII	CATG	7 cut(s)	12, 232, 972, 1052, 1312, 1606, 1681
CviQI	GTAC	2 cut(s)	818, 1121
DdeI	CTNAG	7 cut(s)	206, 375, 609, 748, 884, 915, 1200
DinI	GGCGCC	1 cut(s)	49
DriI	GACNNNNNGTC	2 cut(s)	961, 1042
Eam1104I	CTCTTC	1 cut(s)	1200
Eam1105I	GACNNNNNGTC	2 cut(s)	961, 1042
EarI	CTCTTC	1 cut(s)	1200
Ecl136II	GAGCTC	1 cut(s)	1495
Eco130I	CCWWGG	3 cut(s)	43, 971, 1070
Eco24I	GRGCYC	3 cut(s)	747, 1497, 1702
Eco32I	GATATC	1 cut(s)	984
Eco47I	GGWCC	2 cut(s)	511, 836
Eco53kI	GAGCTC	1 cut(s)	1495
Eco57I	CTGAAG	3 cut(s)	698, 834, 1432
EcoICRI	GAGCTC	1 cut(s)	1495
EcoNI	CCTNNNNNAGG	1 cut(s)	1199
EcoO109I	RGGNCCY	1 cut(s)	511
EcoRII	CCWGG	3 cut(s)	26, 763, 1693
EcoRV	GATATC	1 cut(s)	984
EcoT14I	CCWWGG	3 cut(s)	43, 971, 1070
EcoT22I	ATGCAT	1 cut(s)	669
EcoT38I	GRGCYC	3 cut(s)	747, 1497, 1702
EgeI	GGCGCC	1 cut(s)	49
EheI	GGCGCC	1 cut(s)	49
ErhI	CCWWGG	3 cut(s)	43, 971, 1070
Esp3I	CGTCTC	1 cut(s)	1136
FaeI	CATG	7 cut(s)	15, 235, 975, 1055, 1315, 1609, 1684
FalI	AAGNNNNNCTT	2 cut(s)	1419, 1451
FaqI	GGGAC	4 cut(s)	342, 352, 597, 1381
FatI	CATG	7 cut(s)	11, 231, 971, 1051, 1311, 1605, 1680
FauI	CCCGC	3 cut(s)	522, 1170, 1279
FauNDI	CATATG	1 cut(s)	505
FbaI	TGATCA	1 cut(s)	1561
Fnu4HI	GCNGC	6 cut(s)	606, 896, 1220, 1347, 1395, 1443
FokI	GGATG	8 cut(s)	437, 443, 560, 722, 860, 1331, 1355, 1478
FriOI	GRGCYC	3 cut(s)	747, 1497, 1702
Fsp4HI	GCNGC	6 cut(s)	606, 896, 1220, 1347, 1395, 1443
FspBI	CTAG	3 cut(s)	216, 1109, 1418
GlaI	GCGC	2 cut(s)	49, 547
GluI	GCNGC	6 cut(s)	606, 896, 1220, 1347, 1395, 1443
GsaI	CCCAGC	3 cut(s)	165, 552, 1218
GsuI	CTGGAG	1 cut(s)	1481
HaeII	RGCGCY	1 cut(s)	51
HaeIII	GGCC	6 cut(s)	243, 273, 731, 976, 1030, 1632
HapII	CCGG	3 cut(s)	369, 568, 1027
HgaI	GACGC	1 cut(s)	853
HhaI	GCGC	2 cut(s)	50, 548
Hin1I	GRCGYC	2 cut(s)	48, 864
Hin1II	CATG	7 cut(s)	15, 235, 975, 1055, 1315, 1609, 1684
Hin6I	GCGC	2 cut(s)	48, 546
HinP1I	GCGC	2 cut(s)	48, 546
HincII	GTYRAC	2 cut(s)	703, 1357
HindII	GTYRAC	2 cut(s)	703, 1357
HindIII	AAGCTT	2 cut(s)	642, 1503
HinfI	GANTC	3 cut(s)	448, 924, 962
HpaI	GTTAAC	1 cut(s)	703
HpaII	CCGG	3 cut(s)	369, 568, 1027
HphI	GGTGA	3 cut(s)	566, 1058, 1604
Hpy166II	GTNNAC	4 cut(s)	354, 703, 855, 1357
Hpy188I	TCNGA	7 cut(s)	121, 453, 678, 967, 988, 1201, 1451
Hpy188III	TCNNGA	9 cut(s)	140, 293, 337, 577, 812, 1052, 1097, 1538, 1565
Hpy8I	GTNNAC	4 cut(s)	354, 703, 855, 1357
HpyAV	CCTTC	4 cut(s)	595, 937, 1309, 1456
HpyCH4III	ACNGT	8 cut(s)	593, 992, 1140, 1364, 1402, 1486, 1592, 1667
HpyCH4IV	ACGT	5 cut(s)	435, 804, 1268, 1423, 1530
HpyF10VI	GCNNNNNNNGC	2 cut(s)	12, 1697
HpyF3I	CTNAG	7 cut(s)	206, 375, 609, 748, 884, 915, 1200
HpySE526I	ACGT	5 cut(s)	435, 804, 1268, 1423, 1530
Hsp92I	GRCGYC	2 cut(s)	48, 864
Hsp92II	CATG	7 cut(s)	15, 235, 975, 1055, 1315, 1609, 1684
HspAI	GCGC	2 cut(s)	48, 546
KasI	GGCGCC	1 cut(s)	47
Ksp22I	TGATCA	1 cut(s)	1561
KspAI	GTTAAC	1 cut(s)	703
LmnI	GCTCC	5 cut(s)	538, 814, 1099, 1500, 1697
Lsp1109I	GCAGC	5 cut(s)	617, 1206, 1358, 1381, 1429
LweI	GCATC	5 cut(s)	922, 1309, 1333, 1599, 1678
MabI	ACCWGGT	1 cut(s)	763
MaeI	CTAG	3 cut(s)	216, 1109, 1418
MaeII	ACGT	5 cut(s)	435, 804, 1268, 1423, 1530
MaeIII	GTNAC	4 cut(s)	185, 473, 487, 1064
MflI	RGATCY	5 cut(s)	20, 673, 967, 1111, 1326
MhlI	GDGCHC	5 cut(s)	356, 747, 1108, 1497, 1702
MluCI	AATT	6 cut(s)	35, 332, 1385, 1581, 1595, 1672
Mly113I	GGCGCC	1 cut(s)	48
MlyI	GAGTC	1 cut(s)	971
MmeI	TCCRAC	1 cut(s)	769
Mph1103I	ATGCAT	1 cut(s)	669
MseI	TTAA	2 cut(s)	702, 1160
MslI	CAYNNNNRTG	2 cut(s)	591, 782
MspA1I	CMGCKG	4 cut(s)	517, 608, 1118, 1349
MspI	CCGG	3 cut(s)	369, 568, 1027
MspR9I	CCNGG	4 cut(s)	28, 765, 1027, 1695
MvaI	CCWGG	3 cut(s)	28, 765, 1695
MwoI	GCNNNNNNNGC	2 cut(s)	12, 1697
NarI	GGCGCC	1 cut(s)	48
NciI	CCSGG	1 cut(s)	1027
NcoI	CCATGG	1 cut(s)	971
NdeI	CATATG	1 cut(s)	505
NlaIII	CATG	7 cut(s)	15, 235, 975, 1055, 1315, 1609, 1684
NlaIV	GGNNCC	3 cut(s)	49, 513, 1699
NmuCI	GTSAC	3 cut(s)	473, 487, 1064
NsiI	ATGCAT	1 cut(s)	669
NspI	RCATGY	1 cut(s)	15
OliI	CACNNNNGTG	1 cut(s)	782
PagI	TCATGA	1 cut(s)	1051
PfeI	GAWTC	2 cut(s)	448, 924
PkrI	GCNGC	6 cut(s)	607, 897, 1221, 1348, 1396, 1444
PleI	GAGTC	1 cut(s)	970
PluTI	GGCGCC	1 cut(s)	51
PpsI	GAGTC	1 cut(s)	970
PpuMI	RGGWCCY	1 cut(s)	511
Psp124BI	GAGCTC	1 cut(s)	1497
Psp5II	RGGWCCY	1 cut(s)	511
Psp6I	CCWGG	3 cut(s)	26, 763, 1693
PspFI	CCCAGC	3 cut(s)	161, 548, 1214
PspGI	CCWGG	3 cut(s)	26, 763, 1693
PspN4I	GGNNCC	3 cut(s)	49, 513, 1699
PspPI	GGNCC	4 cut(s)	271, 511, 836, 975
PspPPI	RGGWCCY	1 cut(s)	511
PsrI	GAACNNNNNNTAC	2 cut(s)	242, 274
PsuI	RGATCY	5 cut(s)	20, 673, 967, 1111, 1326
PvuII	CAGCTG	3 cut(s)	608, 1118, 1349
RsaI	GTAC	2 cut(s)	819, 1122
RsaNI	GTAC	2 cut(s)	818, 1121
RseI	CAYNNNNRTG	2 cut(s)	591, 782
SacI	GAGCTC	1 cut(s)	1497
SaqAI	TTAA	2 cut(s)	702, 1160
SatI	GCNGC	6 cut(s)	606, 896, 1220, 1347, 1395, 1443
Sau96I	GGNCC	4 cut(s)	271, 511, 836, 975
ScaI	AGTACT	1 cut(s)	819
SchI	GAGTC	1 cut(s)	971
ScrFI	CCNGG	4 cut(s)	28, 765, 1027, 1695
SduI	GDGCHC	5 cut(s)	356, 747, 1108, 1497, 1702
SexAI	ACCWGGT	1 cut(s)	763
SfaNI	GCATC	5 cut(s)	922, 1309, 1333, 1599, 1678
SfcI	CTRYAG	1 cut(s)	1398
SfoI	GGCGCC	1 cut(s)	49
SinI	GGWCC	2 cut(s)	511, 836
SmiMI	CAYNNNNRTG	2 cut(s)	591, 782
SmlI	CTYRAG	3 cut(s)	138, 725, 824
SmoI	CTYRAG	3 cut(s)	138, 725, 824
Sse9I	AATT	6 cut(s)	35, 332, 1385, 1581, 1595, 1672
SsiI	CCGC	7 cut(s)	515, 845, 896, 935, 1039, 1177, 1286
SspDI	GGCGCC	1 cut(s)	47
SspMI	CTAG	3 cut(s)	216, 1109, 1418
SstI	GAGCTC	1 cut(s)	1497
StyD4I	CCNGG	4 cut(s)	26, 763, 1025, 1693
StyI	CCWWGG	3 cut(s)	43, 971, 1070
TaaI	ACNGT	8 cut(s)	593, 992, 1140, 1364, 1402, 1486, 1592, 1667
TaiI	ACGT	5 cut(s)	438, 807, 1271, 1426, 1533
TaqI	TCGA	1 cut(s)	960
TasI	AATT	6 cut(s)	35, 332, 1385, 1581, 1595, 1672
TatI	WGTACW	2 cut(s)	817, 1120
TauI	GCSGC	1 cut(s)	898
TfiI	GAWTC	2 cut(s)	448, 924
Tru1I	TTAA	2 cut(s)	702, 1160
Tru9I	TTAA	2 cut(s)	702, 1160
TscAI	CASTG	5 cut(s)	79, 598, 784, 997, 1369
TseFI	GTSAC	3 cut(s)	473, 487, 1064
TseI	GCWGC	5 cut(s)	605, 1219, 1346, 1394, 1442
Tsp45I	GTSAC	3 cut(s)	473, 487, 1064
TspDTI	ATGAA	5 cut(s)	515, 1068, 1166, 1290, 1328
TspGWI	ACGGA	3 cut(s)	1024, 1319, 1666
TspRI	CASTG	5 cut(s)	79, 598, 784, 997, 1369
VneI	GTGCAC	1 cut(s)	352
VpaK11BI	GGWCC	2 cut(s)	511, 836
XagI	CCTNNNNNAGG	1 cut(s)	1199
XapI	RAATTY	4 cut(s)	35, 1385, 1595, 1672
XceI	RCATGY	1 cut(s)	15
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1640
XspI	CTAG	3 cut(s)	216, 1109, 1418
ZrmI	AGTACT	1 cut(s)	819
Zsp2I	ATGCAT	1 cut(s)	669

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.