Rh6BG252400

Calcium-dependent protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
Physical Location & Seq
Forward (+)
46374066 .. 46377437
3372 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG252400.1

Sequence Viewer

Length: 1344 bp
ATGGGCAACACATGCCGTGGATCTTCCAGGGGCAAATTTTTCCTTGGCGACAATCAGCCCGAAGAACAATCCACTGCTTCCAATTCCAAGCGTAACACCCCTACTAACCTTTCCGTTTCCGATACCTCCTCAAAATCTCAAGAACTAACCAAAGGAAGCCCCAGCCCCAGCCCCAAACCCAAAGACAAAACTAACAACAATAATCTACCCCTCATTAGTCCTAGAAAAGACAACGCCATGAGGAGAGGCCACGAGAACCAAACTTACTATGTTTTGGGCCATAAGACTGCCAACATTCGTGATCTTTACACTTTGGGTCATAAGTTAGGACAGGGACAATTCGGGACTACTTATTTGTGCACCGAGATTTCAACCGGCTCTCAGTATGCGTGTAAGTCTATCTCCAAGAGGAAGTTGATCTCAAAGGAGGATGTGGATGACGTTAGGAGGGAGATTCAGATAATGCACCATTTGTCTGGTCACAAGAACATTGTGACTATCAAAGGTGCATACGAGGATCCACTGTATGTTCATATTGTAATGGAGCTTTGCGCTGGGGGTGAGTTGTTTGACCGGATCATCCAGAGGGGGCATTACAGTGAGAGGAAGGCAGCTGAGCTGACAAAGATTATTGTTGGGGTTGTTGAAGCTTGCCATTCACTTGGAGTTATGCATAGAGATCTGAAGCCCGAAAACTTCTTGTTGGTTAACAAGGATGATGATTTCTCACTCAAGGCCATTGATTTTGGGCTCTCAGTCTTCTTCAAACCAGAAACTCAGCAGGGAATCTTTGATGCGGTGTTGAAGGGATATATTGACTTCGAGTCAGATCCATGGCCCGTGATATCTGACAGTGCAAAAGACATTATACGGAAGATGTTATGTTCCCGGCCTAAAGACCGCTTGTCTGCTCATGAAGTTTTATGTCATCCTTGGATTTGTGAAAATGGTGTTGCTCCTGACAGAGCACTAGATCCAGCTGTACTTTCTCGTCTCAAACAGTTTTCTGCTATGAACAAGTTAAAGAAGATGGCTTTGCGGGTAATAGCTGAAAGCCTTTCTGAGGAAGAGATTGCTGGGCTGCGAGAGATGTTCAAGGCAATGGATACTGATAATAGTGGTGCAATCACATTTGATGAACTCAAAGCGGGGTTGCGAAAATATGGCTCTACCATGAAGGATGCAGAGATCCGTGATCTTATGGATGCGGATGGAAGAATTGACTATGGCGAATTTGTTGCCATGATGCAAAAAGGCAATGTGAAAGGCAATATAGCTATTGGAAGACGGACTATGAGGAACAGTTTGAATTTGAGCATGAGAGATGCACCAGGGGCCCTTTAG

Protein Analysis

447

Amino Acids

49.87

Weight (kDa)

8.71

Isoelectric Point (pI)

41.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 103 - 259 4.8e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 104 - 255 9e-17 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 267 - 313 4.6e-07 Protein kinase domain
EF-hand_1 PF00036 361 - 387 9.3e-08 EF hand domain
EF-hand_6 PF13405 361 - 389 3.8e-07 EF-hand domain
EF-hand_7 PF13499 361 - 417 7.5e-10 EF-hand domain pair
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 5 cut(s) 797, 901, 1039, 1148, 1208
AclWI GGATC 7 cut(s) 28, 512, 525, 584, 824, 968, 1183
AcsI RAATTY 3 cut(s) 35, 1232, 1309
AcuI CTGAAG 1 cut(s) 704
AfaI GTAC 1 cut(s) 984
AfiI CCNNNNNNNGG 1 cut(s) 1063
AgsI TTSAA 6 cut(s) 372, 647, 766, 805, 1096, 1309
AhdI GACNNNNNGTC 2 cut(s) 823, 904
AjnI CCWGG 2 cut(s) 26, 1330
AluBI AGCT 7 cut(s) 547, 614, 619, 650, 980, 1049, 1277
AluI AGCT 7 cut(s) 547, 614, 619, 650, 980, 1049, 1277
Alw21I GWGCWC 2 cut(s) 362, 970
Alw26I GTCTC 1 cut(s) 998
Alw44I GTGCAC 1 cut(s) 358
AlwI GGATC 7 cut(s) 28, 512, 525, 584, 824, 968, 1183
AoxI GGCC 6 cut(s) 247, 277, 735, 836, 890, 1335
ApaI GGGCCC 1 cut(s) 1339
ApaLI GTGCAC 1 cut(s) 358
ApeKI GCWGC 2 cut(s) 611, 1081
ApoI RAATTY 3 cut(s) 35, 1232, 1309
ArsI GACNNNNNNTTYG 2 cut(s) 337, 369
AspLEI GCGC 1 cut(s) 554
AspS9I GGNCC 4 cut(s) 277, 837, 1335, 1336
AsuC2I CCSGG 1 cut(s) 889
AsuHPI GGTGA 1 cut(s) 572
BaeGI GKGCMC 2 cut(s) 362, 1339
BamHI GGATCC 1 cut(s) 517
BanII GRGCYC 2 cut(s) 753, 1339
BauI CACGAG 1 cut(s) 251
BbsI GAAGAC 2 cut(s) 751, 1291
Bbv12I GWGCWC 2 cut(s) 362, 970
BbvI GCAGC 2 cut(s) 623, 1068
BccI CCATC 2 cut(s) 1024, 1205
BcgI CGANNNNNNTGC 2 cut(s) 1220, 1254
BciT130I CCWGG 2 cut(s) 28, 1332
BciVI GTATCC 1 cut(s) 1099
BcnI CCSGG 1 cut(s) 889
BcoDI GTCTC 1 cut(s) 998
BfaI CTAG 2 cut(s) 222, 971
BfuI GTATCC 1 cut(s) 1099
BglII AGATCT 1 cut(s) 679
BisI GCNGC 2 cut(s) 612, 1082
BlpI GCTNAGC 1 cut(s) 615
BlsI GCNGC 2 cut(s) 613, 1083
Bme1390I CCNGG 3 cut(s) 28, 889, 1332
BmeRI GACNNNNNGTC 2 cut(s) 823, 904
BmgT120I GGNCC 4 cut(s) 277, 837, 1335, 1336
BmiI GGNNCC 3 cut(s) 519, 1336, 1337
BmrFI CCNGG 3 cut(s) 28, 889, 1332
BmsI GCATC 5 cut(s) 784, 1171, 1195, 1236, 1315
BpiI GAAGAC 2 cut(s) 751, 1291
Bpu1102I GCTNAGC 1 cut(s) 615
BpuEI CTTGAG 2 cut(s) 123, 716
BpuMI CCSGG 1 cut(s) 889
BsaJI CCNNGG 6 cut(s) 16, 27, 43, 833, 932, 1331
BsaWI WCCGGW 1 cut(s) 573
Bsc4I CCNNNNNNNGG 1 cut(s) 1063
Bse118I RCCGGY 1 cut(s) 374
Bse3DI GCAATG 2 cut(s) 1107, 1264
BseBI CCWGG 2 cut(s) 28, 1332
BseDI CCNNGG 6 cut(s) 16, 27, 43, 833, 932, 1331
BseGI GGATG 8 cut(s) 436, 442, 579, 721, 928, 1186, 1210, 1216
BseLI CCNNNNNNNGG 1 cut(s) 1063
BseMI GCAATG 2 cut(s) 1107, 1264
BseMII CTCAG 5 cut(s) 395, 606, 768, 791, 1053
BseRI GAGGAG 2 cut(s) 118, 256
BseSI GKGCMC 2 cut(s) 362, 1339
BseXI GCAGC 2 cut(s) 623, 1068
BseYI CCCAGC 4 cut(s) 161, 167, 554, 1076
BshFI GGCC 6 cut(s) 249, 279, 737, 838, 892, 1337
BsiHKAI GWGCWC 2 cut(s) 362, 970
BsiSI CCGG 3 cut(s) 375, 574, 889
BslFI GGGAC 2 cut(s) 348, 358
BslI CCNNNNNNNGG 1 cut(s) 1063
BsmAI GTCTC 1 cut(s) 998
BsmBI CGTCTC 1 cut(s) 998
BsmFI GGGAC 2 cut(s) 348, 358
BsnI GGCC 6 cut(s) 249, 279, 737, 838, 892, 1337
Bsp120I GGGCCC 1 cut(s) 1335
Bsp1286I GDGCHC 4 cut(s) 362, 753, 970, 1339
Bsp1720I GCTNAGC 1 cut(s) 615
Bsp19I CCATGG 1 cut(s) 833
BspACI CCGC 5 cut(s) 797, 901, 1039, 1148, 1208
BspANI GGCC 6 cut(s) 249, 279, 737, 838, 892, 1337
BspCNI CTCAG 5 cut(s) 394, 607, 767, 790, 1054
BspHI TCATGA 1 cut(s) 913
BspLI GGNNCC 3 cut(s) 519, 1336, 1337
BspPI GGATC 7 cut(s) 28, 512, 525, 584, 824, 968, 1183
BsrDI GCAATG 2 cut(s) 1107, 1264
BsrFI RCCGGY 1 cut(s) 374
BssAI RCCGGY 1 cut(s) 374
BssECI CCNNGG 6 cut(s) 16, 27, 43, 833, 932, 1331
BssSI CACGAG 1 cut(s) 251
BssT1I CCWWGG 3 cut(s) 43, 833, 932
Bst2BI CACGAG 1 cut(s) 251
Bst2UI CCWGG 2 cut(s) 28, 1332
Bst4CI ACNGT 5 cut(s) 525, 599, 854, 1002, 1304
Bst6I CTCTTC 1 cut(s) 1062
BstAPI GCANNNNNTGC 1 cut(s) 12
BstC8I GCNNGC 1 cut(s) 652
BstDEI CTNAG 5 cut(s) 381, 615, 754, 777, 1062
BstDSI CCRYGG 2 cut(s) 16, 833
BstENI CCTNNNNNAGG 1 cut(s) 1061
BstF5I GGATG 8 cut(s) 436, 442, 579, 721, 928, 1186, 1210, 1216
BstHHI GCGC 1 cut(s) 554
BstMAI GTCTC 1 cut(s) 998
BstMWI GCNNNNNNNGC 2 cut(s) 12, 1334
BstNI CCWGG 2 cut(s) 28, 1332
BstNSI RCATGY 1 cut(s) 15
BstSCI CCNGG 3 cut(s) 26, 887, 1330
BstSLI GKGCMC 2 cut(s) 362, 1339
BstV1I GCAGC 2 cut(s) 623, 1068
BstV2I GAAGAC 2 cut(s) 751, 1291
BstX2I RGATCY 6 cut(s) 20, 517, 679, 829, 973, 1188
BstXI CCANNNNNNTGG 2 cut(s) 476, 662
BstYI RGATCY 6 cut(s) 20, 517, 679, 829, 973, 1188
BsuI GTATCC 1 cut(s) 1099
BsuRI GGCC 6 cut(s) 249, 279, 737, 838, 892, 1337
BtgI CCRYGG 2 cut(s) 16, 833
BtsCI GGATG 8 cut(s) 436, 442, 579, 721, 928, 1186, 1210, 1216
BtsI GCAGTG 1 cut(s) 72
BtsIMutI CAGTG 4 cut(s) 72, 521, 604, 859
Cac8I GCNNGC 1 cut(s) 652
CciI TCATGA 1 cut(s) 913
CfoI GCGC 1 cut(s) 554
Cfr10I RCCGGY 1 cut(s) 374
Cfr13I GGNCC 4 cut(s) 277, 837, 1335, 1336
Csp6I GTAC 1 cut(s) 983
CviAII CATG 7 cut(s) 12, 238, 834, 914, 1174, 1243, 1318
CviQI GTAC 1 cut(s) 983
DdeI CTNAG 5 cut(s) 381, 615, 754, 777, 1062
DriI GACNNNNNGTC 2 cut(s) 823, 904
Eam1104I CTCTTC 1 cut(s) 1062
Eam1105I GACNNNNNGTC 2 cut(s) 823, 904
EarI CTCTTC 1 cut(s) 1062
Eco130I CCWWGG 3 cut(s) 43, 833, 932
Eco24I GRGCYC 2 cut(s) 753, 1339
Eco32I GATATC 1 cut(s) 846
Eco57I CTGAAG 1 cut(s) 704
EcoNI CCTNNNNNAGG 1 cut(s) 1061
EcoO109I RGGNCCY 2 cut(s) 1335, 1336
EcoRII CCWGG 2 cut(s) 26, 1330
EcoRV GATATC 1 cut(s) 846
EcoT14I CCWWGG 3 cut(s) 43, 833, 932
EcoT22I ATGCAT 1 cut(s) 675
EcoT38I GRGCYC 2 cut(s) 753, 1339
ErhI CCWWGG 3 cut(s) 43, 833, 932
Esp3I CGTCTC 1 cut(s) 998
FaeI CATG 7 cut(s) 15, 241, 837, 917, 1177, 1246, 1321
FaqI GGGAC 2 cut(s) 348, 358
FatI CATG 7 cut(s) 11, 237, 833, 913, 1173, 1242, 1317
FauI CCCGC 2 cut(s) 1032, 1141
Fnu4HI GCNGC 2 cut(s) 612, 1082
FokI GGATG 8 cut(s) 443, 449, 566, 728, 915, 1193, 1217, 1223
FriOI GRGCYC 2 cut(s) 753, 1339
Fsp4HI GCNGC 2 cut(s) 612, 1082
FspBI CTAG 2 cut(s) 222, 971
GlaI GCGC 1 cut(s) 553
GluI GCNGC 2 cut(s) 612, 1082
GsaI CCCAGC 4 cut(s) 165, 171, 558, 1080
HaeIII GGCC 6 cut(s) 249, 279, 737, 838, 892, 1337
HapII CCGG 3 cut(s) 375, 574, 889
HhaI GCGC 1 cut(s) 554
Hin1II CATG 7 cut(s) 15, 241, 837, 917, 1177, 1246, 1321
Hin6I GCGC 1 cut(s) 552
HinP1I GCGC 1 cut(s) 552
HincII GTYRAC 1 cut(s) 709
HindII GTYRAC 1 cut(s) 709
HindIII AAGCTT 1 cut(s) 648
HinfI GANTC 3 cut(s) 454, 786, 824
HpaI GTTAAC 1 cut(s) 709
HpaII CCGG 3 cut(s) 375, 574, 889
HphI GGTGA 1 cut(s) 572
Hpy166II GTNNAC 2 cut(s) 360, 709
Hpy188I TCNGA 6 cut(s) 121, 459, 684, 829, 850, 1063
Hpy188III TCNNGA 6 cut(s) 140, 299, 343, 583, 914, 959
Hpy8I GTNNAC 2 cut(s) 360, 709
HpyAV CCTTC 3 cut(s) 601, 799, 1171
HpyCH4III ACNGT 5 cut(s) 525, 599, 854, 1002, 1304
HpyCH4IV ACGT 1 cut(s) 441
HpyCH4V TGCA 9 cut(s) 360, 466, 509, 673, 857, 1124, 1184, 1249, 1328
HpyF10VI GCNNNNNNNGC 2 cut(s) 12, 1334
HpyF3I CTNAG 5 cut(s) 381, 615, 754, 777, 1062
HpySE526I ACGT 1 cut(s) 441
Hsp92II CATG 7 cut(s) 15, 241, 837, 917, 1177, 1246, 1321
HspAI GCGC 1 cut(s) 552
KspAI GTTAAC 1 cut(s) 709
LmnI GCTCC 2 cut(s) 544, 961
Lsp1109I GCAGC 2 cut(s) 623, 1068
LweI GCATC 5 cut(s) 784, 1171, 1195, 1236, 1315
MaeI CTAG 2 cut(s) 222, 971
MaeII ACGT 1 cut(s) 441
MaeIII GTNAC 3 cut(s) 92, 479, 493
MboII GAAGA 9 cut(s) 15, 74, 751, 754, 886, 1039, 1079, 1227, 1296
MflI RGATCY 6 cut(s) 20, 517, 679, 829, 973, 1188
MhlI GDGCHC 4 cut(s) 362, 753, 970, 1339
MluCI AATT 6 cut(s) 35, 82, 338, 1218, 1232, 1309
MlyI GAGTC 1 cut(s) 833
Mph1103I ATGCAT 1 cut(s) 675
MseI TTAA 2 cut(s) 708, 1022
MslI CAYNNNNRTG 1 cut(s) 597
MspA1I CMGCKG 2 cut(s) 614, 980
MspI CCGG 3 cut(s) 375, 574, 889
MspR9I CCNGG 3 cut(s) 28, 889, 1332
MvaI CCWGG 2 cut(s) 28, 1332
MwoI GCNNNNNNNGC 2 cut(s) 12, 1334
NciI CCSGG 1 cut(s) 889
NcoI CCATGG 1 cut(s) 833
NlaIII CATG 7 cut(s) 15, 241, 837, 917, 1177, 1246, 1321
NlaIV GGNNCC 3 cut(s) 519, 1336, 1337
NmuCI GTSAC 2 cut(s) 479, 493
NsiI ATGCAT 1 cut(s) 675
NspI RCATGY 1 cut(s) 15
PagI TCATGA 1 cut(s) 913
PfeI GAWTC 2 cut(s) 454, 786
PkrI GCNGC 2 cut(s) 613, 1083
PleI GAGTC 1 cut(s) 832
PpsI GAGTC 1 cut(s) 832
Psp6I CCWGG 2 cut(s) 26, 1330
PspFI CCCAGC 4 cut(s) 161, 167, 554, 1076
PspGI CCWGG 2 cut(s) 26, 1330
PspN4I GGNNCC 3 cut(s) 519, 1336, 1337
PspOMI GGGCCC 1 cut(s) 1335
PspPI GGNCC 4 cut(s) 277, 837, 1335, 1336
PsrI GAACNNNNNNTAC 2 cut(s) 248, 280
PsuI RGATCY 6 cut(s) 20, 517, 679, 829, 973, 1188
PvuII CAGCTG 2 cut(s) 614, 980
RsaI GTAC 1 cut(s) 984
RsaNI GTAC 1 cut(s) 983
RseI CAYNNNNRTG 1 cut(s) 597
SaqAI TTAA 2 cut(s) 708, 1022
SatI GCNGC 2 cut(s) 612, 1082
Sau96I GGNCC 4 cut(s) 277, 837, 1335, 1336
SchI GAGTC 1 cut(s) 833
ScrFI CCNGG 3 cut(s) 28, 889, 1332
SduI GDGCHC 4 cut(s) 362, 753, 970, 1339
SfaNI GCATC 5 cut(s) 784, 1171, 1195, 1236, 1315
SmiMI CAYNNNNRTG 1 cut(s) 597
SmlI CTYRAG 2 cut(s) 138, 731
SmoI CTYRAG 2 cut(s) 138, 731
Sse9I AATT 6 cut(s) 35, 82, 338, 1218, 1232, 1309
SsiI CCGC 5 cut(s) 797, 901, 1039, 1148, 1208
SspMI CTAG 2 cut(s) 222, 971
StyD4I CCNGG 3 cut(s) 26, 887, 1330
StyI CCWWGG 3 cut(s) 43, 833, 932
TaaI ACNGT 5 cut(s) 525, 599, 854, 1002, 1304
TaiI ACGT 1 cut(s) 444
TaqI TCGA 1 cut(s) 822
TasI AATT 6 cut(s) 35, 82, 338, 1218, 1232, 1309
TatI WGTACW 1 cut(s) 982
TfiI GAWTC 2 cut(s) 454, 786
Tru1I TTAA 2 cut(s) 708, 1022
Tru9I TTAA 2 cut(s) 708, 1022
TscAI CASTG 4 cut(s) 79, 528, 604, 859
TseFI GTSAC 2 cut(s) 479, 493
TseI GCWGC 2 cut(s) 611, 1081
Tsp45I GTSAC 2 cut(s) 479, 493
TspDTI ATGAA 5 cut(s) 521, 930, 1028, 1152, 1190
TspGWI ACGGA 4 cut(s) 103, 886, 1181, 1303
TspRI CASTG 4 cut(s) 79, 528, 604, 859
VneI GTGCAC 1 cut(s) 358
XagI CCTNNNNNAGG 1 cut(s) 1061
XapI RAATTY 3 cut(s) 35, 1232, 1309
XceI RCATGY 1 cut(s) 15
XspI CTAG 2 cut(s) 222, 971
Zsp2I ATGCAT 1 cut(s) 675
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.