AT5G07350

domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0004359
Physical Location & Seq
Reverse (-)
2319994 .. 2325535
5542 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G07350.2

Sequence Viewer

Length: 2976 bp
ATGGCAACGGGGGCTGAGAACCAATGGCTTAAAGGAAGAGTGAAGGCTGTTACCTCCGGAGACTGCTTAGTGATCACGGCTTTGAGCCACAACAGAGCTGGACCTCCACCGGAAAAGACCATTACTTTTTCTTCTCTTATGGCACCTAAGATGGCTCGCAGAGGAGGTATAGATGAGCCTTTTGCATGGGAAAGCAAAGAATTTTTGAGGAAACTTTGCATAGGAAAGGAGGTTGCATTCAAAGTGGATTACAAGGTGGAAGCTATTGCTGGAAGAGAATTTGGCTCTGTTTTCCTTGGCAACGAGAATCTTGCTAAGCTTGTTGTTAAAACTGGTTGGGCAAAGGTTAGGGAGCCAGGTCAGCAGAATCAGGACAAGGTTAGTCCTTACATTAAAGAGTTGCTACAGCTTGAAGAGCTGGCCAAGCAGGAAGGATATGGTCGTTGGAGCAAGGTTCCTGGTGCTGCTGAGGCATCTATCAGAAATCTTCCTCCTTCTGCCATTGGGGATTCTGCTGGCTTTGATGCCATGGGCCTTTTAGCTGCAAACAAGGGCAAGCCTATGGAAGGTATTGTAGAGCAAGTGCGTGATGGAAGTACTATTCGGGTTTATCTTCTTCCAGAGTTCCAGTTTGTGCAAGTATTTGTTGCGGGAGTCCAGGCTCCATCAATGGGAAGGCGAACCACAAATGGAAGTGTTGTTGAGACAGTTCCAGATGAGCCGAATGGAGATGTTTCTGCTGAGTCACGAGGTCCTCTAACGACAGCTCAGAGACTTGCTGCCTCTGCAGCATCGTCTGTCGAGGTTTCCTCTGATCCATTTGCAACTGAAGCCAAGTACTTTACCGAACACCGTGTTCTTAGTAGAGATGTTCGCATTGTTCTTGAAGGCGTTGACAAATTCAACAATCTGATTGGTTCAGTTCATTATTCTGATGGGGAAACAGTTAAAGACTTGGGGTTGGAGCTCGTTGAAAATGGTCTTGCTAAATTTGTTGAATGGAGTGCCAACATGATGGAGGAGGAAGCTAAGAAAAAGTTGAAAGCTGCAGAACTTCAATGCAAGAAAGATAAGGTTAAAATGTGGGCAAACTACGTTCCTCCAGCTACAAACTCTAAGGCAATTCATGACCAGAACTTTACGGGAAAGGTAGTGGAAGTGGTGAGTGGGGATTGTCTAATAGTTGCCGATGATGCTGTTCCATTTGGGAGTCCAGCAGCAGAGAGACGGGTCTGTCTTTCGAGTATCAGATCTCCAAAAATGGGCAACCCACGTAGAGAAGAGAAACCAGCTCCTTATGCTCGGGAAGCAAGAGAATTTCTGAGACAACGACTTATTGGCAAACAGGTTATTGTTCAAATGGAATATTCAAGGAAAGTCACCCAAGGAGATGGTCCTACCACATCTGGAGCTGCTGATAGGTTCATGGATTTTGGCTCAGTGTTCCTTCCATCTGCTGCCAAAGCCGATTCTGATGAAGTGACTGCACCACCTGCTGCAGCAATTGCTGGCAGTCAGCCGGTTGGTGTGAATATTGCTGAGCTCGTTCTTGTCCGTGGTTTTGGAAATGTGGTTAGACATAGAGATTTTGAAGAGCGATCAAACCATTATGATGCTCTTCTGGCTGCTGAAGCTCGTGCTCTGGCTGGAAAGAAAGGAATCCATTCTGCAAAAGAATCTCCAGCCATGCACATCACAGACCTAACTGTGTCGGCAGCTAAGAAAGCTAAAGATTTCCTGCCATCCCTGCAAAGAATCAGGAGAATACCCGCTGTTGTGGAATATGTCCTCAGCGGACATCGGTTTAAGCTTTATATCCCAAAGATAACATGTAGCATAGCCTTTTCATTCTCTGGTGTCAGATGTCCTGGCCGTGGCGAACCTTATTCAGAAGAAGCTATCTCTGTAATGAGACGTAGGATCATGCAGAGAGATGTTGAGATTGAAGTTGAAACCGTGGATAGAACCGGTACTTTCTTGGGATCCATGTGGGAATCGAGGACAAACGTGGCTACAGTTCTGCTTGAAGCTGGCTTAGCAAAAATGCAGACTAGCTTTGGTGCAGACAGGATCGCCGAAGCACATCTTCTTGAACAGGCAGAGAGATCTGCTAAAAACCAGAAACTGAAGATTTGGGAAAACTATGTTGAAGGAGAAGAAGTCTCAAACGGAAATACTAACACCGTAGAAACCAGGCAAAAGGAGACCTTAAAGGTTGTTGTTACAGAAGTACTTGGAGGTGGTCGGTTCTATGTTCAATCTGCTGGAGATCAGAAAATAGCTTCGATTCAGAACCAGCTTGCATCATTGAGTATTAAAGACGCTCCCATTATCGGATCCTTTAATCCAAAGAGAGGTGACATCGTCCTTGCACAGTTTAGCCTTGATAACTCCTGGAACCGTGCAATGATTGTGACAGCACCCCGAGCAGCGGTTCAATCCCCAGATGAAAAATTCGAAGTGTTCTACATCGATTATGGAAACCAAGAGACAGTTCCATACAGCGCAATCAGACCAATAGACCCTTCGGTATCTGCAGCACCAGGGCTCGCTCAGCTCTGCAGACTTGCCTACATAAAGGTTCCAAGCTTGGAAGACGACTTTGGTCCTGAAGCGGGAGAGTATTTGCATACTGTAACTCTGGGTAGTGGTAAAGAGTTCAAAGCAGTGATAGAAGAAAGAGACACATCTGGAGGCAAAGTCAAAGGGCAAGGCACTGGAACTGAATTCGTTGTCACTCTCATTGCTGTTGATGATGAGATCTCTGTAAATGCTGCAATGCTTCAGGAAGGAATAGCGAGAATGGAGAAACGTCAGAAATGGGGGCACAAAGGCAAACAAGCTGCTCTTGATGCTTTAGAGAAGTTCCAAGAGGAAGCTCGCAAGTCGAGAATTGGAATCTGGCAGTACGGTGACATTGAGTCCGATGATGAGGACACTGGTCCGGCCAGAAAGCCTGCTGGTGGTCGCCGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000932 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003824 GO:0004518 GO:0005488 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005737 GO:0005783 GO:0005829 GO:0005886 GO:0005911 GO:0006082 GO:0006139 GO:0006396 GO:0006397 GO:0006401 GO:0006402 GO:0006629 GO:0006720 GO:0006721 GO:0006725 GO:0006807 GO:0006950 GO:0006970 GO:0007275 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009056 GO:0009057 GO:0009058 GO:0009266 GO:0009408 GO:0009506 GO:0009507 GO:0009536 GO:0009628 GO:0009651 GO:0009685 GO:0009686 GO:0009791 GO:0009845 GO:0009889 GO:0009891 GO:0009892 GO:0009893 GO:0009987 GO:0010035 GO:0010038 GO:0010371 GO:0010372 GO:0010467 GO:0010468 GO:0010494 GO:0010565 GO:0010605 GO:0010629 GO:0010817 GO:0012505 GO:0016020 GO:0016053 GO:0016070 GO:0016071 GO:0016101 GO:0016102 GO:0016114 GO:0016787 GO:0016788 GO:0019216 GO:0019222 GO:0019439 GO:0019747 GO:0019752 GO:0030054 GO:0030312 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031967 GO:0031975 GO:0032350 GO:0032352 GO:0032501 GO:0032502 GO:0032991 GO:0033554 GO:0034605 GO:0034641 GO:0034655 GO:0035770 GO:0036464 GO:0042221 GO:0042445 GO:0042446 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043436 GO:0043455 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044255 GO:0044260 GO:0044265 GO:0044270 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045828 GO:0045834 GO:0046394 GO:0046483 GO:0046686 GO:0046700 GO:0046885 GO:0046886 GO:0046889 GO:0046890 GO:0048518 GO:0048519 GO:0048522 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0055044 GO:0060255 GO:0062012 GO:0062013 GO:0065007 GO:0065008 GO:0071704 GO:0071944 GO:0080090 GO:0090304 GO:0090305 GO:0090351 GO:0097159 GO:1901360 GO:1901361 GO:1901363 GO:1901575 GO:1901576 GO:1990904
KEGG Pathways
Metabolic & Signaling
ko05169 ko05203 map05169 map05203
Pfam Domains
Protein Families
SNase TUDOR

Protein Analysis

991

Amino Acids

108.23

Weight (kDa)

6.92

Isoelectric Point (pI)

37.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SNase PF00565 41 - 151 2.9e-11 Staphylococcal nuclease homologue
SNase PF00565 270 - 364 6.8e-13 Staphylococcal nuclease homologue
SNase PF00565 616 - 714 3.5e-14 Staphylococcal nuclease homologue
TUDOR PF00567 734 - 857 6.6e-23 Tudor domain
SNase PF00565 861 - 969 3.9e-07 Staphylococcal nuclease homologue
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1501
AasI GACNNNNNNGTC 1 cut(s) 1233
Acc36I ACCTGC 1 cut(s) 1501
AccB1I GGYRCC 1 cut(s) 142
AccIII TCCGGA 1 cut(s) 56
AciI CCGC 5 cut(s) 650, 1770, 1794, 2432, 2615
AclWI GGATC 7 cut(s) 809, 1928, 1977, 1990, 2078, 2331, 2344
AcoI YGGCCR 3 cut(s) 420, 1870, 2946
AcsI RAATTY 7 cut(s) 200, 278, 899, 989, 1316, 2453, 2726
AcuI CTGAAG 5 cut(s) 849, 1650, 2147, 2631, 2768
AfaI GTAC 5 cut(s) 598, 839, 1972, 2232, 2909
AfiI CCNNNNNNNGG 9 cut(s) 566, 671, 1262, 1874, 2333, 2354, 2431, 2615, 2963
AflIII ACRYGT 1 cut(s) 1829
AgeI ACCGGT 1 cut(s) 1967
AhdI GACNNNNNGTC 1 cut(s) 2920
AjnI CCWGG 7 cut(s) 355, 457, 657, 1867, 2192, 2393, 2542
AjuI GAANNNNNNNTTGG 6 cut(s) 2478, 2509, 2510, 2541, 2586, 2618
Alw21I GWGCWC 3 cut(s) 969, 1545, 1642
AlwI GGATC 7 cut(s) 809, 1928, 1977, 1990, 2078, 2331, 2344
AlwNI CAGNNNCTG 1 cut(s) 2125
Ama87I CYCGRG 2 cut(s) 1302, 2424
Aor13HI TCCGGA 1 cut(s) 56
AoxI GGCC 4 cut(s) 420, 532, 1870, 2946
ApoI RAATTY 7 cut(s) 200, 278, 899, 989, 1316, 2453, 2726
AsiGI ACCGGT 1 cut(s) 1967
Asp700I GAANNNNTTC 1 cut(s) 1663
AspLEI GCGC 1 cut(s) 2507
AspS9I GGNCC 6 cut(s) 101, 532, 752, 1394, 2606, 2942
AsuHPI GGTGA 4 cut(s) 1174, 1372, 2369, 2924
AsuII TTCGAA 1 cut(s) 2457
AvaI CYCGRG 2 cut(s) 1302, 2424
AvaII GGWCC 5 cut(s) 101, 752, 1394, 2606, 2942
BaeGI GKGCMC 1 cut(s) 2829
BalI TGGCCA 1 cut(s) 422
BamHI GGATCC 2 cut(s) 1982, 2336
BanI GGYRCC 1 cut(s) 142
BanII GRGCYC 3 cut(s) 969, 1545, 2550
BauI CACGAG 2 cut(s) 747, 1635
BbsI GAAGAC 1 cut(s) 2601
Bbv12I GWGCWC 3 cut(s) 969, 1545, 1642
BbvCI CCTCAGC 2 cut(s) 468, 1790
BccI CCATC 8 cut(s) 145, 584, 673, 929, 1009, 1385, 1459, 1750
BceAI ACGGC 2 cut(s) 93, 1857
BcgI CGANNNNNNTGC 2 cut(s) 293, 327
BciT130I CCWGG 7 cut(s) 357, 459, 659, 1869, 2194, 2395, 2544
BclI TGATCA 1 cut(s) 72
BfaI CTAG 1 cut(s) 2052
BfmI CTRYAG 7 cut(s) 404, 786, 1047, 1497, 2013, 2535, 2560
BfuAI ACCTGC 1 cut(s) 1501
BglII AGATCT 3 cut(s) 1250, 2105, 2760
BlpI GCTNAGC 4 cut(s) 315, 1539, 2035, 2553
BmcAI AGTACT 3 cut(s) 598, 839, 2232
Bme1390I CCNGG 7 cut(s) 357, 459, 659, 1869, 2194, 2395, 2544
Bme18I GGWCC 5 cut(s) 101, 752, 1394, 2606, 2942
BmeRI GACNNNNNGTC 1 cut(s) 2920
BmeT110I CYCGRG 2 cut(s) 1302, 2424
BmgT120I GGNCC 6 cut(s) 101, 532, 752, 1394, 2606, 2942
BmiI GGNNCC 8 cut(s) 144, 354, 456, 663, 1984, 2338, 2399, 2583
BmrFI CCNGG 7 cut(s) 357, 459, 659, 1869, 2194, 2395, 2544
BmsI GCATC 7 cut(s) 482, 514, 800, 1183, 1603, 2312, 2842
BoxI GACNNNNGTC 2 cut(s) 2604, 2940
BpiI GAAGAC 1 cut(s) 2601
BplI GAGNNNNNCTC 2 cut(s) 794, 826
BpmI CTGGAG 5 cut(s) 1086, 1428, 1665, 2286, 2712
Bpu10I CCTNAGC 2 cut(s) 468, 1790
Bpu1102I GCTNAGC 4 cut(s) 315, 1539, 2035, 2553
Bpu14I TTCGAA 1 cut(s) 2457
Bsa29I ATCGAT 1 cut(s) 2472
BsaAI YACGTR 1 cut(s) 1274
BsaI GGTCTC 1 cut(s) 2198
BsaJI CCNNGG 7 cut(s) 295, 528, 1384, 1555, 1873, 1956, 2543
BsaWI WCCGGW 3 cut(s) 56, 109, 1967
BsaXI ACNNNNNCTCC 4 cut(s) 2145, 2175, 2685, 2715
Bsc4I CCNNNNNNNGG 9 cut(s) 566, 671, 1262, 1874, 2333, 2354, 2431, 2615, 2963
Bse118I RCCGGY 3 cut(s) 1519, 1967, 2970
Bse1I ACTGG 4 cut(s) 337, 628, 2722, 2944
Bse3DI GCAATG 3 cut(s) 2412, 2742, 2784
BseAI TCCGGA 1 cut(s) 56
BseBI CCWGG 7 cut(s) 357, 459, 659, 1869, 2194, 2395, 2544
BseCI ATCGAT 1 cut(s) 2472
BseDI CCNNGG 7 cut(s) 295, 528, 1384, 1555, 1873, 1956, 2543
BseGI GGATG 1 cut(s) 1742
BseLI CCNNNNNNNGG 9 cut(s) 566, 671, 1262, 1874, 2333, 2354, 2431, 2615, 2963
BseMI GCAATG 3 cut(s) 2412, 2742, 2784
BseMII CTCAG 9 cut(s) 6, 459, 732, 782, 1313, 1452, 1530, 1804, 2567
BseNI ACTGG 4 cut(s) 337, 628, 2722, 2944
BseRI GAGGAG 2 cut(s) 177, 1034
BseSI GKGCMC 1 cut(s) 2829
BsgI GTGCAG 2 cut(s) 1470, 2082
BshFI GGCC 4 cut(s) 422, 534, 1872, 2948
BshNI GGYRCC 1 cut(s) 142
BshTI ACCGGT 1 cut(s) 1967
BshVI ATCGAT 1 cut(s) 2472
BsiHKAI GWGCWC 3 cut(s) 969, 1545, 1642
BsiHKCI CYCGRG 2 cut(s) 1302, 2424
BsiSI CCGG 6 cut(s) 57, 110, 1520, 1968, 2945, 2971
BslI CCNNNNNNNGG 9 cut(s) 566, 671, 1262, 1874, 2333, 2354, 2431, 2615, 2963
BsmBI CGTCTC 2 cut(s) 1219, 1906
BsmI GAATGC 1 cut(s) 236
BsnI GGCC 4 cut(s) 422, 534, 1872, 2948
Bso31I GGTCTC 1 cut(s) 2198
BsoBI CYCGRG 2 cut(s) 1302, 2424
Bsp119I TTCGAA 1 cut(s) 2457
Bsp1286I GDGCHC 5 cut(s) 969, 1545, 1642, 2550, 2829
Bsp13I TCCGGA 1 cut(s) 56
Bsp1720I GCTNAGC 4 cut(s) 315, 1539, 2035, 2553
Bsp19I CCATGG 1 cut(s) 528
BspACI CCGC 5 cut(s) 650, 1770, 1794, 2432, 2615
BspANI GGCC 4 cut(s) 422, 534, 1872, 2948
BspCNI CTCAG 9 cut(s) 7, 460, 733, 781, 1314, 1451, 1531, 1803, 2566
BspDI ATCGAT 1 cut(s) 2472
BspEI TCCGGA 1 cut(s) 56
BspHI TCATGA 1 cut(s) 1126
BspLI GGNNCC 8 cut(s) 144, 354, 456, 663, 1984, 2338, 2399, 2583
BspMAI CTGCAG 5 cut(s) 790, 1051, 1501, 2539, 2564
BspMI ACCTGC 1 cut(s) 1501
BspPI GGATC 7 cut(s) 809, 1928, 1977, 1990, 2078, 2331, 2344
BspQI GCTCTTC 3 cut(s) 408, 1587, 1623
BspT104I TTCGAA 1 cut(s) 2457
BspT107I GGYRCC 1 cut(s) 142
BspTNI GGTCTC 1 cut(s) 2198
BsrDI GCAATG 3 cut(s) 2412, 2742, 2784
BsrFI RCCGGY 3 cut(s) 1519, 1967, 2970
BsrI ACTGG 4 cut(s) 337, 628, 2722, 2944
BssAI RCCGGY 3 cut(s) 1519, 1967, 2970
BssECI CCNNGG 7 cut(s) 295, 528, 1384, 1555, 1873, 1956, 2543
BssSI CACGAG 2 cut(s) 747, 1635
BssT1I CCWWGG 3 cut(s) 295, 528, 1384
Bst2BI CACGAG 2 cut(s) 747, 1635
Bst2UI CCWGG 7 cut(s) 357, 459, 659, 1869, 2194, 2395, 2544
Bst6I CTCTTC 6 cut(s) 31, 268, 408, 1275, 1587, 1623
BstAPI GCANNNNNTGC 2 cut(s) 1493, 1505
BstBAI YACGTR 1 cut(s) 1274
BstBI TTCGAA 1 cut(s) 2457
BstDSI CCRYGG 4 cut(s) 528, 1555, 1873, 1956
BstENI CCTNNNNNAGG 1 cut(s) 564
BstF5I GGATG 1 cut(s) 1742
BstHHI GCGC 1 cut(s) 2507
BstNI CCWGG 7 cut(s) 357, 459, 659, 1869, 2194, 2395, 2544
BstNSI RCATGY 1 cut(s) 1833
BstPAI GACNNNNGTC 2 cut(s) 2604, 2940
BstSCI CCNGG 7 cut(s) 355, 457, 657, 1867, 2192, 2393, 2542
BstSFI CTRYAG 7 cut(s) 404, 786, 1047, 1497, 2013, 2535, 2560
BstSLI GKGCMC 1 cut(s) 2829
BstV2I GAAGAC 1 cut(s) 2601
BstX2I RGATCY 5 cut(s) 1250, 1982, 2105, 2336, 2760
BstXI CCANNNNNNTGG 2 cut(s) 1015, 1391
BstYI RGATCY 5 cut(s) 1250, 1982, 2105, 2336, 2760
Bsu15I ATCGAT 1 cut(s) 2472
BsuRI GGCC 4 cut(s) 422, 534, 1872, 2948
BsuTUI ATCGAT 1 cut(s) 2472
BtgI CCRYGG 4 cut(s) 528, 1555, 1873, 1956
BtsCI GGATG 1 cut(s) 1742
BtsI GCAGTG 1 cut(s) 2673
BtsIMutI CAGTG 4 cut(s) 1446, 2673, 2715, 2937
BveI ACCTGC 1 cut(s) 1501
CaiI CAGNNNCTG 1 cut(s) 2125
CciI TCATGA 1 cut(s) 1126
CfoI GCGC 1 cut(s) 2507
Cfr10I RCCGGY 3 cut(s) 1519, 1967, 2970
Cfr13I GGNCC 6 cut(s) 101, 532, 752, 1394, 2606, 2942
ClaI ATCGAT 1 cut(s) 2472
CseI GACGC 1 cut(s) 2330
Csp6I GTAC 5 cut(s) 597, 838, 1971, 2231, 2908
CspAI ACCGGT 1 cut(s) 1967
CviAII CATG 9 cut(s) 186, 529, 1012, 1127, 1426, 1687, 1830, 1924, 1987
CviQI GTAC 5 cut(s) 597, 838, 1971, 2231, 2908
DrdI GACNNNNNNGTC 1 cut(s) 1233
DriI GACNNNNNGTC 1 cut(s) 2920
DseDI GACNNNNNNGTC 1 cut(s) 1233
EaeI YGGCCR 3 cut(s) 420, 1870, 2946
Eam1104I CTCTTC 6 cut(s) 31, 268, 408, 1275, 1587, 1623
Eam1105I GACNNNNNGTC 1 cut(s) 2920
EarI CTCTTC 6 cut(s) 31, 268, 408, 1275, 1587, 1623
Ecl136II GAGCTC 2 cut(s) 967, 1543
Eco130I CCWWGG 3 cut(s) 295, 528, 1384
Eco24I GRGCYC 3 cut(s) 969, 1545, 2550
Eco31I GGTCTC 1 cut(s) 2198
Eco47I GGWCC 5 cut(s) 101, 752, 1394, 2606, 2942
Eco53kI GAGCTC 2 cut(s) 967, 1543
Eco57I CTGAAG 5 cut(s) 849, 1650, 2147, 2631, 2768
Eco88I CYCGRG 2 cut(s) 1302, 2424
EcoICRI GAGCTC 2 cut(s) 967, 1543
EcoNI CCTNNNNNAGG 1 cut(s) 564
EcoO109I RGGNCCY 1 cut(s) 752
EcoRI GAATTC 1 cut(s) 2726
EcoRII CCWGG 7 cut(s) 355, 457, 657, 1867, 2192, 2393, 2542
EcoT14I CCWWGG 3 cut(s) 295, 528, 1384
EcoT38I GRGCYC 3 cut(s) 969, 1545, 2550
ErhI CCWWGG 3 cut(s) 295, 528, 1384
Esp3I CGTCTC 2 cut(s) 1219, 1906
FaeI CATG 9 cut(s) 189, 532, 1015, 1130, 1429, 1690, 1833, 1927, 1990
FalI AAGNNNNNCTT 6 cut(s) 2070, 2102, 2192, 2224, 2832, 2864
FatI CATG 9 cut(s) 185, 528, 1011, 1126, 1425, 1686, 1829, 1923, 1986
FauI CCCGC 3 cut(s) 643, 1777, 2608
FbaI TGATCA 1 cut(s) 72
FokI GGATG 1 cut(s) 1729
FriOI GRGCYC 3 cut(s) 969, 1545, 2550
FspBI CTAG 1 cut(s) 2052
GlaI GCGC 1 cut(s) 2506
GsuI CTGGAG 5 cut(s) 1086, 1428, 1665, 2286, 2712
HaeIII GGCC 4 cut(s) 422, 534, 1872, 2948
HapII CCGG 6 cut(s) 57, 110, 1520, 1968, 2945, 2971
HgaI GACGC 1 cut(s) 2330
HhaI GCGC 1 cut(s) 2507
Hin1II CATG 9 cut(s) 189, 532, 1015, 1130, 1429, 1690, 1833, 1927, 1990
Hin6I GCGC 1 cut(s) 2505
HinP1I GCGC 1 cut(s) 2505
HincII GTYRAC 1 cut(s) 895
HindII GTYRAC 1 cut(s) 895
HindIII AAGCTT 3 cut(s) 317, 1808, 2587
HpaII CCGG 6 cut(s) 57, 110, 1520, 1968, 2945, 2971
HphI GGTGA 4 cut(s) 1174, 1372, 2369, 2924
Hpy166II GTNNAC 1 cut(s) 895
Hpy8I GTNNAC 1 cut(s) 895
HpyCH4IV ACGT 5 cut(s) 1095, 1273, 1915, 2007, 2812
HpySE526I ACGT 5 cut(s) 1095, 1273, 1915, 2007, 2812
Hsp92II CATG 9 cut(s) 189, 532, 1015, 1130, 1429, 1690, 1833, 1927, 1990
HspAI GCGC 1 cut(s) 2505
Kpn2I TCCGGA 1 cut(s) 56
Ksp22I TGATCA 1 cut(s) 72
LguI GCTCTTC 3 cut(s) 408, 1587, 1623
LmnI GCTCC 7 cut(s) 352, 447, 667, 964, 1297, 1409, 2329
LweI GCATC 7 cut(s) 482, 514, 800, 1183, 1603, 2312, 2842
MaeI CTAG 1 cut(s) 2052
MaeII ACGT 5 cut(s) 1095, 1273, 1915, 2007, 2812
MfeI CAATTG 1 cut(s) 1503
MflI RGATCY 5 cut(s) 1250, 1982, 2105, 2336, 2760
MhlI GDGCHC 5 cut(s) 969, 1545, 1642, 2550, 2829
MlsI TGGCCA 1 cut(s) 422
MluNI TGGCCA 1 cut(s) 422
MlyI GAGTC 4 cut(s) 663, 752, 1219, 2930
MmeI TCCRAC 2 cut(s) 425, 942
Mox20I TGGCCA 1 cut(s) 422
MroI TCCGGA 1 cut(s) 56
MroXI GAANNNNTTC 1 cut(s) 1663
MscI TGGCCA 1 cut(s) 422
MseI TTAA 9 cut(s) 30, 327, 393, 948, 1077, 1806, 2210, 2316, 2343
MslI CAYNNNNRTG 1 cut(s) 1611
Msp20I TGGCCA 1 cut(s) 422
MspA1I CMGCKG 3 cut(s) 1772, 1794, 2432
MspI CCGG 6 cut(s) 57, 110, 1520, 1968, 2945, 2971
MspR9I CCNGG 7 cut(s) 357, 459, 659, 1869, 2194, 2395, 2544
MunI CAATTG 1 cut(s) 1503
Mva1269I GAATGC 1 cut(s) 236
MvaI CCWGG 7 cut(s) 357, 459, 659, 1869, 2194, 2395, 2544
NcoI CCATGG 1 cut(s) 528
NlaIII CATG 9 cut(s) 189, 532, 1015, 1130, 1429, 1690, 1833, 1927, 1990
NlaIV GGNNCC 8 cut(s) 144, 354, 456, 663, 1984, 2338, 2399, 2583
NmuCI GTSAC 7 cut(s) 744, 1378, 1480, 2357, 2413, 2734, 2912
NspI RCATGY 1 cut(s) 1833
NspV TTCGAA 1 cut(s) 2457
PagI TCATGA 1 cut(s) 1126
PaqCI CACCTGC 1 cut(s) 1501
PciI ACATGT 1 cut(s) 1829
PciSI GCTCTTC 3 cut(s) 408, 1587, 1623
PctI GAATGC 1 cut(s) 236
PdmI GAANNNNTTC 1 cut(s) 1663
PflFI GACNNNGTC 1 cut(s) 2363
PfoI TCCNGGA 1 cut(s) 2393
PinAI ACCGGT 1 cut(s) 1967
PleI GAGTC 4 cut(s) 662, 751, 1218, 2929
PpsI GAGTC 4 cut(s) 662, 751, 1218, 2929
Ppu21I YACGTR 1 cut(s) 1274
PpuMI RGGWCCY 1 cut(s) 752
PscI ACATGT 1 cut(s) 1829
PshAI GACNNNNGTC 2 cut(s) 2604, 2940
Psp124BI GAGCTC 2 cut(s) 969, 1545
Psp5II RGGWCCY 1 cut(s) 752
Psp6I CCWGG 7 cut(s) 355, 457, 657, 1867, 2192, 2393, 2542
PspGI CCWGG 7 cut(s) 355, 457, 657, 1867, 2192, 2393, 2542
PspN4I GGNNCC 8 cut(s) 144, 354, 456, 663, 1984, 2338, 2399, 2583
PspPI GGNCC 6 cut(s) 101, 532, 752, 1394, 2606, 2942
PspPPI RGGWCCY 1 cut(s) 752
PstI CTGCAG 5 cut(s) 790, 1051, 1501, 2539, 2564
PstNI CAGNNNCTG 1 cut(s) 2125
PsuI RGATCY 5 cut(s) 1250, 1982, 2105, 2336, 2760
PsyI GACNNNGTC 1 cut(s) 2363
RsaI GTAC 5 cut(s) 598, 839, 1972, 2232, 2909
RsaNI GTAC 5 cut(s) 597, 838, 1971, 2231, 2908
RseI CAYNNNNRTG 1 cut(s) 1611
SacI GAGCTC 2 cut(s) 969, 1545
SapI GCTCTTC 3 cut(s) 408, 1587, 1623
SaqAI TTAA 9 cut(s) 30, 327, 393, 948, 1077, 1806, 2210, 2316, 2343
Sau96I GGNCC 6 cut(s) 101, 532, 752, 1394, 2606, 2942
ScaI AGTACT 3 cut(s) 598, 839, 2232
SchI GAGTC 4 cut(s) 663, 752, 1219, 2930
ScrFI CCNGG 7 cut(s) 357, 459, 659, 1869, 2194, 2395, 2544
SduI GDGCHC 5 cut(s) 969, 1545, 1642, 2550, 2829
SfaNI GCATC 7 cut(s) 482, 514, 800, 1183, 1603, 2312, 2842
SfcI CTRYAG 7 cut(s) 404, 786, 1047, 1497, 2013, 2535, 2560
SfuI TTCGAA 1 cut(s) 2457
SinI GGWCC 5 cut(s) 101, 752, 1394, 2606, 2942
SmiMI CAYNNNNRTG 1 cut(s) 1611
SsiI CCGC 5 cut(s) 650, 1770, 1794, 2432, 2615
SspI AATATT 2 cut(s) 1367, 1534
SspMI CTAG 1 cut(s) 2052
SstI GAGCTC 2 cut(s) 969, 1545
StyD4I CCNGG 7 cut(s) 355, 457, 657, 1867, 2192, 2393, 2542
StyI CCWWGG 3 cut(s) 295, 528, 1384
TaiI ACGT 5 cut(s) 1098, 1276, 1918, 2010, 2815
TaqI TCGA 7 cut(s) 801, 1241, 1997, 2285, 2457, 2472, 2888
TatI WGTACW 3 cut(s) 596, 837, 2230
Tru1I TTAA 9 cut(s) 30, 327, 393, 948, 1077, 1806, 2210, 2316, 2343
Tru9I TTAA 9 cut(s) 30, 327, 393, 948, 1077, 1806, 2210, 2316, 2343
TscAI CASTG 4 cut(s) 1446, 2673, 2722, 2944
TseFI GTSAC 7 cut(s) 744, 1378, 1480, 2357, 2413, 2734, 2912
Tsp45I GTSAC 7 cut(s) 744, 1378, 1480, 2357, 2413, 2734, 2912
TspDTI ATGAA 6 cut(s) 914, 1115, 1414, 1491, 1836, 2463
TspGWI ACGGA 2 cut(s) 1544, 2184
TspRI CASTG 4 cut(s) 1446, 2673, 2722, 2944
Tth111I GACNNNGTC 1 cut(s) 2363
VpaK11BI GGWCC 5 cut(s) 101, 752, 1394, 2606, 2942
XagI CCTNNNNNAGG 1 cut(s) 564
XapI RAATTY 7 cut(s) 200, 278, 899, 989, 1316, 2453, 2726
XceI RCATGY 1 cut(s) 1833
XcmI CCANNNNNNNNNTGG 1 cut(s) 95
XmnI GAANNNNTTC 1 cut(s) 1663
XspI CTAG 1 cut(s) 2052
ZrmI AGTACT 3 cut(s) 598, 839, 2232
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.