RchiOBHm_Chr7g0188331

Staphylococcal nuclease domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0004359
Physical Location & Seq
Forward (+)
7911919 .. 7918299
6381 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ16818

Sequence Viewer

Length: 3246 bp
ATGCCCATTGCTGGCTTCAGCTCGTCATCGTCACTATATAATGTGAAACTCCGGAGCCATAACGAAATCTCTCTGTGCCTCTCTCTCTCTCTCCAAGACTCTTTCGCCTCCGTGATCCGCCGCTCAACGACGCATTTGCCCCGAACCGAGGATCCGAAATCCATTTGGATCAGATCCGAACCAGGAACCGACAGCCCGGCCCACCGGATCCGATCCTGCTTGAGATTATCTCTATCAATATTATACGAAGCTGTTGAGATGGCATCGTCAACAGCTGGGACCACGGGATGGCTGAGAGGCAGAGTCAAGGCCGTTACGTCCGGCGATTGCCTGGTCATCATGGCCCTCACCTCGAGCAAGCCCGGACCACCACCTGAGAAAACCATCACTCTCTCATCGCTTATGGCTCCCAAGCTGGCCCGTAGAGGTGGCGTTGATGAGCCATTTGCATGGGAGAGCAGAGAGTTCCTGAGGAAGCTCTGCATAGGAAAGGAGGTGACTTTCAAGACCGACTATACTGTATCATCCATAGGTCGGGATTTTGGCTCTGTTTTCCTTGGTGACAAAAATGTTGCCATGCTTGTTGTTTCACAGGGCTGGGCAAAGGTCCGGGAGCAACCTAGTCAACCGAAACAGGGACAACAGAAAGTAGAAGCCAGTCCTTTCATTGCAGAACTGCTCCAACTTGAAGAGCAGGCAAAGACCCAGGGCCTTGGTCGCTGGAGCAAGGTTCCAGGTGCTGCTGAGGCATCCGTTAGGAATCTACCTCCCTCTGCTATTGGTGATCCTAGCAAATTAGATGCCATGAGTCTGTTAAATACAAACAAGGGCAAGCCAATGGAAGCCATTGTTGAGCAGGTTCGTGATGGCAGTACAATTCGGGTCTACTTGCTTCCCGAGTTTCAGTTCGTCCAAGTATTTGTAGCAGGAATTCAGGCCCCGTCAGTGGGAAAGAGGCCTTTTACAACAGAAATTGTCCCTGAGCCAGAAATTCCTTCAGATAAAACAAATGGAGATATCTCTGCTGAAACTCGAGCCCCTCTTACTTCTGCACAAAGGATTGCAGCTTCAGCAGTATCACCCAATGAAACTGTTCCGGATCCATTTGCACTGGAAGCTAAATACTTTACTGAAATTCGTGTGTTGAATAGAGACGTTCGCATTGTTCTGGAAGGCGTTGACAAATTCAGCAATTTGATTGGTTCAGTATATTACCCTGATGGGGACTCTGCAAAAGATTTGGCTCTGGAGCTTGTAGAACATGGTTATGCAAAATATGTTGAATGGAGTGCAAACATGATGGAAGAAGAACCGAAGCGGCGGCTGAAGACTGCAGAACTTCAAGCAAAGAAAACGAAGTTGAGGCTTTGGACAAACTATATGCCTCCGGCTACAAATTCAAAGCCAATTCATAACCAGAACTTTACGGGAAAGGTTGTGGAGGTTGTAAGTGGTGACTGTGTTATTGTAGCTGATGATTCTATTCCATATGGCAGTCCCCTAGCAGAGAGGAGAGTAAATCTTTCAAGTATTAGGTGTCCAAAAATGGGTAATCCTCGTAGAGAGGAAAAACCAGCTCCATACGCCCGTGAAGCAAAGGAGTTCCTTAGAACACGCCTTATTGGACGCCAGGTCAGTGTCCAAATGGAGTACTCGAGAAAGATCAGCCCGGCAGATGGAGCTGCAGTTGCTAATGGACCTACAGATTCCAGGATAATGGATTTTGGATCAGTCTTCCTTTCAGCCCCTACTAAAGCTGAAGGAGACGATGCAGCAACACCTGCTTCATCAGCCAGCCAGCAGGCAGGGGTGAATGTTGCTGAACTCGTGGTTGCACGTGGCTTTGGCAGTGTTATCAGGCATCGGGATTTTGAGGAGAGATCAAGCTATTATGATGCTCTTCTTTCTGCGGAATCACGTGCTACCGCTGGCAAGAAAGGAATGCATTCTTCCAAGGAACCCCCAGTCATGCACATAACAGACCTGACAACGGCATCGGCTAAGAAAGCCCGAGATTTCTTGCCATTCTTGCATCGAAGTAGGAGAATCCCTGCCGTTGTGGAATATGTGCTCAGTGGTCATCGTTTTAAACTATTGGTTCCCAAGGAAACATGTAGCATTGCTTTCTCGTTCTCTGGTGTTAGATGTCCTGGTCGTGATGAGCCATATTCGGACGAAGCAATTGCACTAATGAGGCGAAGAATAATGCAGAGAGATGTCGAGATTGAAGTGGAGACTGTTGATAGAACTGGAACTTTCTTGGGATCTCTATGGGAATCAAGGACTAACATGGCAATTGCCCTTGTTGAAGCTGGCCTTGCAAAGTATACTTCCTTTGCCGGCAGTGACAGGATCCCAGATGCCCACCTGCTTGAACAAGCTGAGAAAAATGCAAAAAAGCAGAAACTGAAAATTTGGGAGAAATATGTTGAAGGAGAGGAAGTTCCAAATGGTTTACCAACTGACACCAAACAGAAAGAAGTGCTAAAGGTAGTGGTTACAGAAGTTTTGGAGGGCGGTAAATTTTATGTTCAGACAGTTGCGGACCAGAGTATATCTTCTATTCAGCAACAGCTTGCTTCATTGAATCTTCAAGAAGCTCCTTTAATTGGTGCTTTTAATCCAAAGAAGGGTGACATTGTCCTTGCTCAATTTAGTGCAGATAATTCCTGGAACCGGGCAATGATTGTCAATGCTCCTCGAGGACCTGTGGAATCTTCTAAAGACAAGTTTGAAGTGTTCTACATAGATTATGGTAATCAAGAGGTTGTCCCTTACAGTTCGTTACGGCCTCTTGATACTTCTGTTTCCTCGACACCTGGTCTTGCCCAACTTTGCAGCCTTGCATATCTTAAGGTCCCCACCTTGACACAGGACCATGGTGAAGAAGCAGCAGAATTTTTAAGTGAGTACACATTATCCAAAGAGTTTTCAGCCATGATTGAGGAAAGGGATTTCTCAGGAGGCAAAGTTAAAGGCCAGGGAACTGGACCGGTTCTTTTGGTAACTCTTGTTGCTGCTAATGAAGAGATCAGTATAAATGCTGCCATGCTCCAGGAGGGACTTGCTAGGCTAGAGAAAAAGAAGAAATTTGACACCAAGGATCGAAAAGCGGCACTCGACAACTTGGAAAAGTTCCAGGAAGAAGCACAGGTTAATCGACGGGGGAAGTGGCAATATGGACATTATGATTCCGAGGAAGAGGAGATTGTTCCTCCTGTTAAAAAGGGTGTCGGCAAGCGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000932 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003824 GO:0004518 GO:0005488 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005737 GO:0005783 GO:0005829 GO:0005886 GO:0005911 GO:0006082 GO:0006139 GO:0006396 GO:0006397 GO:0006401 GO:0006402 GO:0006629 GO:0006720 GO:0006721 GO:0006725 GO:0006807 GO:0006950 GO:0006970 GO:0007275 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009056 GO:0009057 GO:0009058 GO:0009266 GO:0009408 GO:0009506 GO:0009507 GO:0009536 GO:0009628 GO:0009651 GO:0009685 GO:0009686 GO:0009791 GO:0009845 GO:0009889 GO:0009891 GO:0009892 GO:0009893 GO:0009987 GO:0010035 GO:0010038 GO:0010371 GO:0010372 GO:0010467 GO:0010468 GO:0010494 GO:0010565 GO:0010605 GO:0010629 GO:0010817 GO:0012505 GO:0016020 GO:0016053 GO:0016070 GO:0016071 GO:0016101 GO:0016102 GO:0016114 GO:0016787 GO:0016788 GO:0019216 GO:0019222 GO:0019439 GO:0019747 GO:0019752 GO:0030054 GO:0030312 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031967 GO:0031975 GO:0032350 GO:0032352 GO:0032501 GO:0032502 GO:0032991 GO:0033554 GO:0034605 GO:0034641 GO:0034655 GO:0035770 GO:0036464 GO:0042221 GO:0042445 GO:0042446 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043436 GO:0043455 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044255 GO:0044260 GO:0044265 GO:0044270 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045828 GO:0045834 GO:0046394 GO:0046483 GO:0046686 GO:0046700 GO:0046885 GO:0046886 GO:0046889 GO:0046890 GO:0048518 GO:0048519 GO:0048522 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0055044 GO:0060255 GO:0062012 GO:0062013 GO:0065007 GO:0065008 GO:0071704 GO:0071944 GO:0080090 GO:0090304 GO:0090305 GO:0090351 GO:0097159 GO:1901360 GO:1901361 GO:1901363 GO:1901575 GO:1901576 GO:1990904
KEGG Pathways
Metabolic & Signaling
ko05169 ko05203 map05169 map05203
Pfam Domains
Protein Families
SNase TUDOR

Protein Analysis

1081

Amino Acids

119.04

Weight (kDa)

8.25

Isoelectric Point (pI)

48.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SNase PF00565 128 - 243 1.3e-09 Staphylococcal nuclease homologue
SNase PF00565 365 - 458 5.6e-13 Staphylococcal nuclease homologue
SNase PF00565 710 - 807 2.6e-15 Staphylococcal nuclease homologue
TUDOR PF00567 826 - 949 2.1e-21 Tudor domain
SNase PF00565 955 - 1059 1.4e-06 Staphylococcal nuclease homologue
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 1789, 2376
AbsI CCTCGAGG 1 cut(s) 2700
Acc36I ACCTGC 3 cut(s) 847, 1789, 2376
AccB7I CCANNNNNTGG 1 cut(s) 288
AccBSI CCGCTC 1 cut(s) 123
AccI GTMKAC 2 cut(s) 885, 2327
AccIII TCCGGA 2 cut(s) 51, 1096
AciI CCGC 9 cut(s) 118, 121, 1318, 1321, 1910, 1926, 2517, 2543, 3113
AcsI RAATTY 9 cut(s) 930, 990, 1134, 1184, 1396, 2412, 2522, 2897, 3089
AcuI CTGAAG 4 cut(s) 981, 1053, 1346, 1779
AcvI CACGTG 2 cut(s) 1838, 1919
AcyI GRCGYC 1 cut(s) 1627
AfaI GTAC 3 cut(s) 874, 1652, 2912
AflII CTTAAG 1 cut(s) 2852
AflIII ACRYGT 1 cut(s) 2111
AgeI ACCGGT 1 cut(s) 2992
AhdI GACNNNNNGTC 2 cut(s) 1631, 2820
AloI GAACNNNNNNTCC 4 cut(s) 136, 168, 2427, 2459
Alw21I GWGCWC 1 cut(s) 2073
Alw26I GTCTC 3 cut(s) 1146, 1758, 2228
AlwNI CAGNNNCTG 2 cut(s) 740, 2407
Ama87I CYCGRG 6 cut(s) 352, 896, 1032, 1654, 2010, 2700
Aor13HI TCCGGA 2 cut(s) 51, 1096
ApeKI GCWGC 8 cut(s) 740, 1064, 1682, 1772, 2838, 2891, 3017, 3044
ApoI RAATTY 9 cut(s) 930, 990, 1134, 1184, 1396, 2412, 2522, 2897, 3089
AsiGI ACCGGT 1 cut(s) 2992
Asp700I GAANNNNTTC 2 cut(s) 1092, 1945
AsuC2I CCSGG 5 cut(s) 197, 363, 611, 1670, 2678
AsuHPI GGTGA 9 cut(s) 340, 508, 572, 794, 1071, 1466, 1822, 2645, 2894
AvaI CYCGRG 6 cut(s) 352, 896, 1032, 1654, 2010, 2700
AvaII GGWCC 9 cut(s) 279, 365, 607, 1697, 2545, 2705, 2857, 2875, 2990
AxyI CCTNAGG 1 cut(s) 470
BaeI ACNNNNGTAYC 2 cut(s) 2790, 2823
BamHI GGATCC 4 cut(s) 151, 207, 1099, 2352
BanII GRGCYC 1 cut(s) 1039
BauI CACGAG 1 cut(s) 1826
BbrPI CACGTG 2 cut(s) 1838, 1919
BbsI GAAGAC 2 cut(s) 1334, 1726
Bbv12I GWGCWC 1 cut(s) 2073
BbvCI CCTCAGC 1 cut(s) 744
BbvI GCAGC 8 cut(s) 727, 1076, 1669, 1784, 2850, 2903, 3004, 3031
BccI CCATC 7 cut(s) 253, 282, 392, 860, 1214, 1294, 1670
BceAI ACGGC 4 cut(s) 296, 2007, 2039, 2804
BcgI CGANNNNNNTGC 4 cut(s) 118, 152, 2165, 2199
BcnI CCSGG 5 cut(s) 197, 363, 611, 1670, 2678
BcoDI GTCTC 3 cut(s) 1146, 1758, 2228
BfaI CTAG 5 cut(s) 621, 789, 1502, 3069, 3074
BfmI CTRYAG 3 cut(s) 1332, 1683, 1701
BfrI CTTAAG 1 cut(s) 2852
BfuAI ACCTGC 3 cut(s) 847, 1789, 2376
BmcAI AGTACT 1 cut(s) 1652
Bme18I GGWCC 9 cut(s) 279, 365, 607, 1697, 2545, 2705, 2857, 2875, 2990
BmeRI GACNNNNNGTC 2 cut(s) 1631, 2820
BmeT110I CYCGRG 6 cut(s) 352, 896, 1032, 1654, 2010, 2700
BmrI ACTGGG 1 cut(s) 1958
BmsI GCATC 9 cut(s) 272, 758, 790, 1759, 1870, 1885, 2003, 2041, 2350
BmuI ACTGGG 1 cut(s) 1958
BpiI GAAGAC 2 cut(s) 1334, 1726
BplI GAGNNNNNCTC 2 cut(s) 214, 246
BpmI CTGGAG 3 cut(s) 742, 1268, 3038
Bpu10I CCTNAGC 2 cut(s) 744, 981
BpuEI CTTGAG 1 cut(s) 241
BpuMI CCSGG 5 cut(s) 197, 363, 611, 1670, 2678
BsaAI YACGTR 2 cut(s) 1838, 1919
BsaHI GRCGYC 1 cut(s) 1627
BsaWI WCCGGW 4 cut(s) 51, 204, 1096, 2992
BsaXI ACNNNNNCTCC 6 cut(s) 1671, 1701, 2427, 2457, 2955, 2985
Bse118I RCCGGY 2 cut(s) 2339, 2992
Bse1I ACTGG 5 cut(s) 657, 1116, 1964, 2254, 2992
Bse21I CCTNAGG 1 cut(s) 470
Bse3DI GCAATG 4 cut(s) 6, 666, 2118, 2688
BseAI TCCGGA 2 cut(s) 51, 1096
BseGI GGATG 3 cut(s) 293, 524, 749
BseMI GCAATG 4 cut(s) 6, 666, 2118, 2688
BseMII CTCAG 8 cut(s) 284, 366, 461, 735, 972, 2086, 2373, 2973
BseNI ACTGG 5 cut(s) 657, 1116, 1964, 2254, 2992
BseRI GAGGAG 4 cut(s) 1525, 1889, 2688, 3218
BseXI GCAGC 8 cut(s) 727, 1076, 1669, 1784, 2850, 2903, 3004, 3031
BseYI CCCAGC 2 cut(s) 275, 597
BsgI GTGCAG 2 cut(s) 1035, 2679
BshTI ACCGGT 1 cut(s) 2992
BsiHKAI GWGCWC 1 cut(s) 2073
BsiHKCI CYCGRG 6 cut(s) 352, 896, 1032, 1654, 2010, 2700
BslFI GGGAC 8 cut(s) 292, 651, 962, 1238, 1482, 2756, 2843, 3075
BsmAI GTCTC 3 cut(s) 1146, 1758, 2228
BsmBI CGTCTC 2 cut(s) 1146, 1758
BsmFI GGGAC 8 cut(s) 292, 651, 962, 1238, 1482, 2756, 2843, 3075
BsmI GAATGC 2 cut(s) 1945, 1947
BsoBI CYCGRG 6 cut(s) 352, 896, 1032, 1654, 2010, 2700
Bsp1286I GDGCHC 2 cut(s) 1039, 2073
Bsp13I TCCGGA 2 cut(s) 51, 1096
Bsp19I CCATGG 1 cut(s) 2878
BspACI CCGC 9 cut(s) 118, 121, 1318, 1321, 1910, 1926, 2517, 2543, 3113
BspCNI CTCAG 8 cut(s) 285, 367, 462, 736, 973, 2085, 2374, 2972
BspEI TCCGGA 2 cut(s) 51, 1096
BspMAI CTGCAG 2 cut(s) 1336, 1687
BspMI ACCTGC 3 cut(s) 847, 1789, 2376
BspQI GCTCTTC 2 cut(s) 684, 1905
BspTI CTTAAG 1 cut(s) 2852
BsrBI CCGCTC 1 cut(s) 123
BsrDI GCAATG 4 cut(s) 6, 666, 2118, 2688
BsrFI RCCGGY 2 cut(s) 2339, 2992
BsrI ACTGG 5 cut(s) 657, 1116, 1964, 2254, 2992
BssAI RCCGGY 2 cut(s) 2339, 2992
BssNAI GTATAC 1 cut(s) 2328
BssNI GRCGYC 1 cut(s) 1627
BssSI CACGAG 1 cut(s) 1826
BssT1I CCWWGG 6 cut(s) 556, 712, 1953, 2103, 2878, 3099
Bst1107I GTATAC 1 cut(s) 2328
Bst2BI CACGAG 1 cut(s) 1826
Bst4CI ACNGT 6 cut(s) 520, 1093, 1460, 2239, 2539, 2780
Bst6I CTCTTC 4 cut(s) 684, 1905, 3021, 3195
BstACI GRCGYC 1 cut(s) 1627
BstAFI CTTAAG 1 cut(s) 2852
BstAPI GCANNNNNTGC 1 cut(s) 1781
BstBAI YACGTR 2 cut(s) 1838, 1919
BstDSI CCRYGG 2 cut(s) 282, 2878
BstF5I GGATG 3 cut(s) 293, 524, 749
BstMAI GTCTC 3 cut(s) 1146, 1758, 2228
BstNSI RCATGY 1 cut(s) 2115
BstSFI CTRYAG 3 cut(s) 1332, 1683, 1701
BstV1I GCAGC 8 cut(s) 727, 1076, 1669, 1784, 2850, 2903, 3004, 3031
BstV2I GAAGAC 2 cut(s) 1334, 1726
BstX2I RGATCY 6 cut(s) 151, 173, 207, 1099, 2264, 2352
BstXI CCANNNNNNTGG 4 cut(s) 450, 713, 1717, 2987
BstYI RGATCY 6 cut(s) 151, 173, 207, 1099, 2264, 2352
BstZ17I GTATAC 1 cut(s) 2328
Bsu36I CCTNAGG 1 cut(s) 470
BtgI CCRYGG 2 cut(s) 282, 2878
BtgZI GCGATG 1 cut(s) 381
BtsCI GGATG 3 cut(s) 293, 524, 749
BtsI GCAGTG 2 cut(s) 1855, 2350
BtsIMutI CAGTG 6 cut(s) 951, 1109, 1642, 1855, 2080, 2350
BveI ACCTGC 3 cut(s) 847, 1789, 2376
CaiI CAGNNNCTG 2 cut(s) 740, 2407
Cfr10I RCCGGY 2 cut(s) 2339, 2992
CseI GACGC 2 cut(s) 139, 1635
CsiI ACCWGGT 1 cut(s) 2818
Csp6I GTAC 3 cut(s) 873, 1651, 2911
CspAI ACCGGT 1 cut(s) 2992
CviQI GTAC 3 cut(s) 873, 1651, 2911
DraI TTTAAA 1 cut(s) 2089
DriI GACNNNNNGTC 2 cut(s) 1631, 2820
Eam1104I CTCTTC 4 cut(s) 684, 1905, 3021, 3195
Eam1105I GACNNNNNGTC 2 cut(s) 1631, 2820
EarI CTCTTC 4 cut(s) 684, 1905, 3021, 3195
EciI GGCGGA 1 cut(s) 107
Eco130I CCWWGG 6 cut(s) 556, 712, 1953, 2103, 2878, 3099
Eco147I AGGCCT 1 cut(s) 958
Eco24I GRGCYC 1 cut(s) 1039
Eco32I GATATC 1 cut(s) 1018
Eco47I GGWCC 9 cut(s) 279, 365, 607, 1697, 2545, 2705, 2857, 2875, 2990
Eco57I CTGAAG 4 cut(s) 981, 1053, 1346, 1779
Eco72I CACGTG 2 cut(s) 1838, 1919
Eco81I CCTNAGG 1 cut(s) 470
Eco88I CYCGRG 6 cut(s) 352, 896, 1032, 1654, 2010, 2700
EcoO109I RGGNCCY 4 cut(s) 709, 937, 2705, 2857
EcoRI GAATTC 1 cut(s) 930
EcoRV GATATC 1 cut(s) 1018
EcoT14I CCWWGG 6 cut(s) 556, 712, 1953, 2103, 2878, 3099
EcoT22I ATGCAT 1 cut(s) 1947
EcoT38I GRGCYC 1 cut(s) 1039
ErhI CCWWGG 6 cut(s) 556, 712, 1953, 2103, 2878, 3099
Esp3I CGTCTC 2 cut(s) 1146, 1758
FalI AAGNNNNNCTT 2 cut(s) 2301, 2333
FaqI GGGAC 8 cut(s) 292, 651, 962, 1238, 1482, 2756, 2843, 3075
FauNDI CATATG 1 cut(s) 1489
FblI GTMKAC 2 cut(s) 885, 2327
FokI GGATG 3 cut(s) 300, 511, 736
FriOI GRGCYC 1 cut(s) 1039
FspBI CTAG 5 cut(s) 621, 789, 1502, 3069, 3074
GsaI CCCAGC 2 cut(s) 279, 601
GsuI CTGGAG 3 cut(s) 742, 1268, 3038
HgaI GACGC 2 cut(s) 139, 1635
Hin1I GRCGYC 1 cut(s) 1627
HincII GTYRAC 3 cut(s) 270, 626, 1180
HindII GTYRAC 3 cut(s) 270, 626, 1180
HphI GGTGA 9 cut(s) 340, 508, 572, 794, 1071, 1466, 1822, 2645, 2894
Hpy166II GTNNAC 7 cut(s) 270, 626, 886, 1180, 2328, 2456, 2913
Hpy188I TCNGA 8 cut(s) 156, 173, 178, 212, 1000, 2173, 2535, 3196
Hpy8I GTNNAC 7 cut(s) 270, 626, 886, 1180, 2328, 2456, 2913
Hpy99I CGWCG 2 cut(s) 133, 3165
HpyAV CCTTC 5 cut(s) 1005, 1166, 1754, 2426, 2623
HpyCH4III ACNGT 6 cut(s) 520, 1093, 1460, 2239, 2539, 2780
HpyCH4IV ACGT 4 cut(s) 317, 1155, 1837, 1918
HpySE526I ACGT 4 cut(s) 317, 1155, 1837, 1918
Hsp92I GRCGYC 1 cut(s) 1627
Kpn2I TCCGGA 2 cut(s) 51, 1096
KroI GCCGGC 1 cut(s) 2339
KroNI GCCGGC 1 cut(s) 2341
LguI GCTCTTC 2 cut(s) 684, 1905
Lsp1109I GCAGC 8 cut(s) 727, 1076, 1669, 1784, 2850, 2903, 3004, 3031
LweI GCATC 9 cut(s) 272, 758, 790, 1759, 1870, 1885, 2003, 2041, 2350
MabI ACCWGGT 1 cut(s) 2818
MaeI CTAG 5 cut(s) 621, 789, 1502, 3069, 3074
MaeII ACGT 4 cut(s) 317, 1155, 1837, 1918
MbiI CCGCTC 1 cut(s) 123
MfeI CAATTG 2 cut(s) 2181, 2295
MflI RGATCY 6 cut(s) 151, 173, 207, 1099, 2264, 2352
MhlI GDGCHC 2 cut(s) 1039, 2073
MlyI GAGTC 4 cut(s) 92, 312, 817, 1220
MmeI TCCRAC 1 cut(s) 706
Mph1103I ATGCAT 1 cut(s) 1947
MroI TCCGGA 2 cut(s) 51, 1096
MroNI GCCGGC 1 cut(s) 2339
MroXI GAANNNNTTC 2 cut(s) 1092, 1945
MseI TTAA 9 cut(s) 815, 2088, 2606, 2619, 2853, 2903, 2973, 3156, 3222
MslI CAYNNNNRTG 2 cut(s) 448, 1266
MspA1I CMGCKG 2 cut(s) 275, 1928
MspCI CTTAAG 1 cut(s) 2852
MunI CAATTG 2 cut(s) 2181, 2295
Mva1269I GAATGC 2 cut(s) 1945, 1947
NaeI GCCGGC 1 cut(s) 2341
NciI CCSGG 5 cut(s) 197, 363, 611, 1670, 2678
NcoI CCATGG 1 cut(s) 2878
NdeI CATATG 1 cut(s) 1489
NgoMIV GCCGGC 1 cut(s) 2339
NmuCI GTSAC 6 cut(s) 30, 496, 560, 1454, 2345, 2633
NsiI ATGCAT 1 cut(s) 1947
NspI RCATGY 1 cut(s) 2115
PaeR7I CTCGAG 4 cut(s) 352, 1032, 1654, 2700
PaqCI CACCTGC 2 cut(s) 1789, 2376
PasI CCCWGGG 1 cut(s) 706
PceI AGGCCT 1 cut(s) 958
PciI ACATGT 1 cut(s) 2111
PciSI GCTCTTC 2 cut(s) 684, 1905
PctI GAATGC 2 cut(s) 1945, 1947
PdiI GCCGGC 1 cut(s) 2341
PdmI GAANNNNTTC 2 cut(s) 1092, 1945
PfeI GAWTC 9 cut(s) 760, 1478, 1706, 1913, 2046, 2276, 2587, 2714, 3191
PflFI GACNNNGTC 1 cut(s) 2639
PflMI CCANNNNNTGG 1 cut(s) 288
PfoI TCCNGGA 5 cut(s) 609, 1709, 2669, 3054, 3138
PinAI ACCGGT 1 cut(s) 2992
PleI GAGTC 4 cut(s) 92, 311, 816, 1220
PmaCI CACGTG 2 cut(s) 1838, 1919
PmlI CACGTG 2 cut(s) 1838, 1919
PpsI GAGTC 4 cut(s) 92, 311, 816, 1220
Ppu21I YACGTR 2 cut(s) 1838, 1919
PpuMI RGGWCCY 2 cut(s) 2705, 2857
PscI ACATGT 1 cut(s) 2111
Psp5II RGGWCCY 2 cut(s) 2705, 2857
PspCI CACGTG 2 cut(s) 1838, 1919
PspFI CCCAGC 2 cut(s) 275, 597
PspPPI RGGWCCY 2 cut(s) 2705, 2857
PspXI VCTCGAGB 3 cut(s) 352, 1032, 2700
PstI CTGCAG 2 cut(s) 1336, 1687
PstNI CAGNNNCTG 2 cut(s) 740, 2407
PsuI RGATCY 6 cut(s) 151, 173, 207, 1099, 2264, 2352
PsyI GACNNNGTC 1 cut(s) 2639
PvuII CAGCTG 1 cut(s) 275
RsaI GTAC 3 cut(s) 874, 1652, 2912
RsaNI GTAC 3 cut(s) 873, 1651, 2911
RseI CAYNNNNRTG 2 cut(s) 448, 1266
SapI GCTCTTC 2 cut(s) 684, 1905
SaqAI TTAA 9 cut(s) 815, 2088, 2606, 2619, 2853, 2903, 2973, 3156, 3222
ScaI AGTACT 1 cut(s) 1652
SchI GAGTC 4 cut(s) 92, 312, 817, 1220
SduI GDGCHC 2 cut(s) 1039, 2073
SexAI ACCWGGT 1 cut(s) 2818
SfaNI GCATC 9 cut(s) 272, 758, 790, 1759, 1870, 1885, 2003, 2041, 2350
SfcI CTRYAG 3 cut(s) 1332, 1683, 1701
Sfr274I CTCGAG 4 cut(s) 352, 1032, 1654, 2700
SinI GGWCC 9 cut(s) 279, 365, 607, 1697, 2545, 2705, 2857, 2875, 2990
SlaI CTCGAG 4 cut(s) 352, 1032, 1654, 2700
SmiMI CAYNNNNRTG 2 cut(s) 448, 1266
SmlI CTYRAG 6 cut(s) 220, 352, 1032, 1654, 2700, 2852
SmoI CTYRAG 6 cut(s) 220, 352, 1032, 1654, 2700, 2852
SseBI AGGCCT 1 cut(s) 958
SsiI CCGC 9 cut(s) 118, 121, 1318, 1321, 1910, 1926, 2517, 2543, 3113
SspI AATATT 1 cut(s) 240
SspMI CTAG 5 cut(s) 621, 789, 1502, 3069, 3074
StuI AGGCCT 1 cut(s) 958
StyI CCWWGG 6 cut(s) 556, 712, 1953, 2103, 2878, 3099
TaaI ACNGT 6 cut(s) 520, 1093, 1460, 2239, 2539, 2780
TaiI ACGT 4 cut(s) 320, 1158, 1840, 1921
TaqII GACCGA 1 cut(s) 524
TatI WGTACW 3 cut(s) 872, 1650, 2910
TauI GCSGC 4 cut(s) 123, 1321, 1324, 3116
TfiI GAWTC 9 cut(s) 760, 1478, 1706, 1913, 2046, 2276, 2587, 2714, 3191
Tru1I TTAA 9 cut(s) 815, 2088, 2606, 2619, 2853, 2903, 2973, 3156, 3222
Tru9I TTAA 9 cut(s) 815, 2088, 2606, 2619, 2853, 2903, 2973, 3156, 3222
TscAI CASTG 6 cut(s) 951, 1116, 1642, 1855, 2080, 2350
TseFI GTSAC 6 cut(s) 30, 496, 560, 1454, 2345, 2633
TseI GCWGC 8 cut(s) 740, 1064, 1682, 1772, 2838, 2891, 3017, 3044
Tsp45I GTSAC 6 cut(s) 30, 496, 560, 1454, 2345, 2633
TspDTI ATGAA 6 cut(s) 655, 1101, 1400, 1776, 2571, 3039
TspGWI ACGGA 2 cut(s) 100, 742
TspRI CASTG 6 cut(s) 951, 1116, 1642, 1855, 2080, 2350
Tth111I GACNNNGTC 1 cut(s) 2639
Van91I CCANNNNNTGG 1 cut(s) 288
Vha464I CTTAAG 1 cut(s) 2852
VpaK11BI GGWCC 9 cut(s) 279, 365, 607, 1697, 2545, 2705, 2857, 2875, 2990
XapI RAATTY 9 cut(s) 930, 990, 1134, 1184, 1396, 2412, 2522, 2897, 3089
XceI RCATGY 1 cut(s) 2115
XhoI CTCGAG 4 cut(s) 352, 1032, 1654, 2700
XmiI GTMKAC 2 cut(s) 885, 2327
XmnI GAANNNNTTC 2 cut(s) 1092, 1945
XspI CTAG 5 cut(s) 621, 789, 1502, 3069, 3074
ZrmI AGTACT 1 cut(s) 1652
Zsp2I ATGCAT 1 cut(s) 1947
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.