Prupe.5G139000_v2.0.a1

Staphylococcal nuclease domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
OG0004359
Physical Location & Seq
Forward (+)
13041762 .. 13048375
6614 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G139000.2

Sequence Viewer

Length: 2985 bp
ATGGCATCATCAACAGCTGCGGCCACAGGATGGTACAGAGGGAGAGTGAAGGCTGTTCCTTCAGGGGACTCGTTGGTCATCATGGCCCTCACAGCCAACAAGGCAGGACCCCCACCCGAAAGAACCATCACTTTGTCATCCCTTATGGCTCCGAAACTGGCTCGTAGAACTACCAAGGATGAGCCATTTGCATGGGACAGCAGAGAGTTTCTGAGGAAGCTCTGCCTTGGAAAGGAGGTGGCTTTCAAAGTGGACTACATTGTACAACAGATAGGGCGAGAATTTGGCTCTGTTTTTCTTGGTGACAAGAATGTTGCAATGCTGATTGTTGCTGAAGGCTGGGCAAAGGTCAAGGAGGTTAAACAGAACCAACAGAAAGGAGAAGCTAGTCCTTATATTGCTGAGCTGCTACGTCTCCAAGAACAAGCTAACACCCAGGGCCTTGGTCTCTGGAGCAAGGTTCCTGGTGCTGCTGACACATCCATTAGGACTCTGCCTCCCTCTGCCATTGGTGATCCTAGCAATTTAGATGCCATGAGTCTGTTGGCTGCAAATAAGGGCAGGCCCATGGAAGGTATCGTTGAGCAAGTTCGTGATGGAAGCACAGTTCGGGTCTACTTGCTTCCCGATTTTCAGTTTGTTCAAGTATTCGTTGCAGGAACTCAGGCCCCATCAGTGGGAAGGAGACCTATAGCTTCAGAAGTTGTTGCTGAACCAGAAACAACTTCCGATAAAACAAATGGTGATGTTTCCACTGAGCCTCGAGCCCCTTTAACTTCTGCCCAAAGAATTGTAGCTTCAACAACATCATCTGTTGAAATTGCTGCTGATCCATTTGCACTGGAAGCTAAACATTTTACAGAAACTCGTGTGCTGCATAGAGATGTCCGCATCGTTCTGGAAGGTGTTGACAAATTCAGTAATTTGATTGGGTCAGTATATTACCCGGATGGGGACTCAGCGAAAGACCTGGCCCTGGAGCTTGTTGAAAATGGTTATGCAAAATACGTTGAATGGAGTGCTAACATGATGGAAGAAGATGCGAAGCGGCGGCTGAAGGCTGCAGAGCTTGAAGCTAAGAAAAGCAAGTTGAGGATCTGGACAAACTACGTACCCCCAGTTACAAATTCAAAGGCAATTCATGACCAGAATTTCACTGGCAAGGTTGTGGAGGTTGTTAGCGGGGACTGTGTCATTGTTGCTGATGATTCTGTTCCATTCGGCAGTCCACTAGCAGAGAGGCGAGTTAATCTTTCAAGTATTAGGTGCCCGAAAATGGGCAATCCTCGTAGAGAAGAAAAGCCGGCTCCATATGCCCGTGAAGCAAAAGAGTTTCTGAGAACACGCCTTATTGGACTCCAAGTGAATGTTCAAATGGAGTATTCAAGGAAGATCACGGCAGATGGAGCTGCAGTTTCTACTGGACCTGCAGATTCCAGAGTCATGGATTTTGGATCAGTCTTCCTTGTAAAGGCTGAGGGTGATGATGCTCCAGCACCTGCTTCATCTGCTCCTGGTAGCCAGCCAGCTGGGGTGAATGTCGCTGAACTGGTGGTTGCACGTGGCTTTGGCACTGTTATTAGACATAGAGATTTTGAGGAGCGGTCAAGCTATTATGATGCCCTTCTTTCGGCGGAATCACGTGCTATTGCTGGCAAAAAAGGAATACATTCTGCCAAGGATCCTCCAGTGATGCACATTACAGACCTGATGCAGGCATCAGCTAAGAAAGCCAGAGATTTCTTTCCATTCTTACAAAAAAGGAGGAAAATTCCTGCCGTTGTGGAATATGTCTTTAGTGGCCATCGTTTTAAACTATTGATTCCCAAGGAAACATGCAGCATTGCCTTTGCATTCTCTGGTGTCAGATGTTCCGGTCGTGGGGAGCCCTATTCAGATGAAGCAATTGCGCTAATGAGACGAAGAATAATGCAGAGAGATGTTGAGATTGAAGTCGAGACTGTTGATAGAACTGGAACTTTCTTGGGATCTTTGTGGGAGTCAAAGTCAAAGACCAATGTGGCGATTGCCCTTGTTGAAGCTGGCCTGGCAAAATTTCAAAATTCCTTTGGCGGTGAAATCCCAGATGGGCACCTTCTTGAACAAGCTGAGCAATCTGCAAAAAGGCAGAAATTGAAAATTTGGGAGAACTATGTTGAAGGAGAGGAAGTTTCCAATGGTTCAGCTGTCGACAACAACAAACAGAAAGAAGTGCTAAAGGTTGTGGTAACAGAAGTTTTGGGAAGTGGTGGTAAATTTTATGTTCAGACAGCTGGTGATCAGAAAATTGCCTCTATACAGCAACAGCTTGCATCCTTGAGTATTCAAGAAGCTCCCGTGATTGGTGCTTTTAATCCTAAGAAGGGTGACATTGTCCTTGCTCAGTTTAGTGCAGATAATTCGTGGAACCGAGCAATGATTGTCAATGCACCTCGAGGAGCTGTGGAATCCCCTAAAGACAAGTTTGAAGTCTTCTACATTGATTATGGTAATCAAGAGGTTGTCCCTTACAGTGAGTTACGGCCTCTTGACCCTTCGGTTTCCTCTGCACCTGGTCTTGCTCAATTATGCAGCCTTGCATATGTTAAAGTCCCGAGCTTGGAGGAGGACTTTGGTCAAGAAGCAGCAGAGTATTTAAGTGAGCACACATTAAATAGTTCCATGGAGTTTAGGGCCATGGTTGAGGAAAGGGATCTTTCAGGGGGAAAAGTTAAAGGCCAGGGAACTGGACCGGTTCTTGTTGTGACTCTTGTTGCTGTGGATGCTGAGATCAGTGTAAATGCTGCCATGCTTCAGGAAGGACTTGCTAGGTTAGAGAAACAGAAGAAACGGGAAACCAAGGAGCGGAAGACAGCAATCGAGAACTTGGAAAAGTTCCAGGAAGAAGCAAGGGCTGATAGGCGGGGGATGTGGCGCTATGGAGACATCCAGTCAGATGATGAGGACATTGCTCCTCCCGTTAGAAAGGCTGCTGGCAAGCGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000932 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003824 GO:0004518 GO:0005488 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005737 GO:0005783 GO:0005829 GO:0005886 GO:0005911 GO:0006082 GO:0006139 GO:0006396 GO:0006397 GO:0006401 GO:0006402 GO:0006629 GO:0006720 GO:0006721 GO:0006725 GO:0006807 GO:0006950 GO:0006970 GO:0007275 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009056 GO:0009057 GO:0009058 GO:0009266 GO:0009408 GO:0009506 GO:0009507 GO:0009536 GO:0009628 GO:0009651 GO:0009685 GO:0009686 GO:0009791 GO:0009845 GO:0009889 GO:0009891 GO:0009892 GO:0009893 GO:0009987 GO:0010035 GO:0010038 GO:0010371 GO:0010372 GO:0010467 GO:0010468 GO:0010494 GO:0010565 GO:0010605 GO:0010629 GO:0010817 GO:0012505 GO:0016020 GO:0016053 GO:0016070 GO:0016071 GO:0016101 GO:0016102 GO:0016114 GO:0016787 GO:0016788 GO:0019216 GO:0019222 GO:0019439 GO:0019747 GO:0019752 GO:0030054 GO:0030312 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031967 GO:0031975 GO:0032350 GO:0032352 GO:0032501 GO:0032502 GO:0032991 GO:0033554 GO:0034605 GO:0034641 GO:0034655 GO:0035770 GO:0036464 GO:0042221 GO:0042445 GO:0042446 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043436 GO:0043455 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044255 GO:0044260 GO:0044265 GO:0044270 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045828 GO:0045834 GO:0046394 GO:0046483 GO:0046686 GO:0046700 GO:0046885 GO:0046886 GO:0046889 GO:0046890 GO:0048518 GO:0048519 GO:0048522 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0055044 GO:0060255 GO:0062012 GO:0062013 GO:0065007 GO:0065008 GO:0071704 GO:0071944 GO:0080090 GO:0090304 GO:0090305 GO:0090351 GO:0097159 GO:1901360 GO:1901361 GO:1901363 GO:1901575 GO:1901576 GO:1990904
KEGG Pathways
Metabolic & Signaling
ko05169 ko05203 map05169 map05203
Pfam Domains
Protein Families
SNase TUDOR

Protein Analysis

995

Amino Acids

108.76

Weight (kDa)

6.62

Isoelectric Point (pI)

39.89

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1507
AasI GACNNNNNNGTC 1 cut(s) 74
AbsI CCTCGAGG 1 cut(s) 2433
Acc36I ACCTGC 2 cut(s) 1435, 1507
AccB1I GGYRCC 2 cut(s) 1266, 2091
AccB7I CCANNNNNTGG 1 cut(s) 30
AccBSI CCGCTC 2 cut(s) 1603, 2845
AccI GTMKAC 2 cut(s) 615, 2190
AclWI GGATC 8 cut(s) 509, 824, 1103, 1462, 1676, 1689, 1996, 2700
AcoI YGGCCR 2 cut(s) 21, 1801
AcsI RAATTY 9 cut(s) 281, 914, 1126, 1150, 1770, 2054, 2062, 2139, 2255
AcuI CTGAAG 5 cut(s) 45, 354, 681, 1076, 2777
AcvI CACGTG 2 cut(s) 1562, 1643
AfaI GTAC 3 cut(s) 35, 264, 1113
AgeI ACCGGT 1 cut(s) 2731
AhdI GACNNNNNGTC 1 cut(s) 2929
AjnI CCWGG 9 cut(s) 435, 463, 969, 975, 1513, 2046, 2551, 2718, 2877
AjuI GAANNNNNNNTTGG 2 cut(s) 1353, 1385
AloI GAACNNNNNNTCC 2 cut(s) 591, 623
Alw21I GWGCWC 1 cut(s) 2646
Alw26I GTCTC 6 cut(s) 419, 452, 679, 1912, 1952, 2916
AlwI GGATC 8 cut(s) 509, 824, 1103, 1462, 1676, 1689, 1996, 2700
AlwNI CAGNNNCTG 1 cut(s) 1499
Ama87I CYCGRG 3 cut(s) 762, 2433, 2593
ApoI RAATTY 9 cut(s) 281, 914, 1126, 1150, 1770, 2054, 2062, 2139, 2255
AsiGI ACCGGT 1 cut(s) 2731
Asp700I GAANNNNTTC 1 cut(s) 1669
AspLEI GCGC 2 cut(s) 1912, 2916
AspS9I GGNCC 9 cut(s) 85, 107, 439, 564, 667, 973, 1424, 2673, 2729
AsuC2I CCSGG 1 cut(s) 947
AsuHPI GGTGA 8 cut(s) 314, 524, 755, 1493, 1546, 2087, 2288, 2378
AvaI CYCGRG 3 cut(s) 762, 2433, 2593
AvaII GGWCC 3 cut(s) 107, 1424, 2729
BaeGI GKGCMC 2 cut(s) 1271, 2094
BalI TGGCCA 1 cut(s) 1803
BamHI GGATCC 1 cut(s) 1681
BanI GGYRCC 2 cut(s) 1266, 2091
BanII GRGCYC 2 cut(s) 769, 1890
BauI CACGAG 1 cut(s) 867
BbrPI CACGTG 2 cut(s) 1562, 1643
BbsI GAAGAC 3 cut(s) 1453, 2464, 2855
Bbv12I GWGCWC 1 cut(s) 2646
BbvCI CCTCAGC 1 cut(s) 1476
BccI CCATC 9 cut(s) 24, 134, 590, 679, 944, 1024, 1397, 1812, 2081
BceAI ACGGC 3 cut(s) 1413, 1763, 2537
BcgI CGANNNNNNTGC 2 cut(s) 2382, 2416
BciT130I CCWGG 9 cut(s) 437, 465, 971, 977, 1515, 2048, 2553, 2720, 2879
BclI TGATCA 1 cut(s) 2278
BcnI CCSGG 1 cut(s) 947
BcoDI GTCTC 6 cut(s) 419, 452, 679, 1912, 1952, 2916
BfaI CTAG 4 cut(s) 387, 519, 1232, 2808
BfmI CTRYAG 4 cut(s) 690, 1062, 1410, 1428
BfoI RGCGCY 1 cut(s) 2917
BfuAI ACCTGC 2 cut(s) 1435, 1507
BglI GCCNNNNNGGC 1 cut(s) 101
BlpI GCTNAGC 2 cut(s) 402, 2109
Bme18I GGWCC 3 cut(s) 107, 1424, 2729
BmeRI GACNNNNNGTC 1 cut(s) 2929
BmeT110I CYCGRG 3 cut(s) 762, 2433, 2593
BmgT120I GGNCC 9 cut(s) 85, 107, 439, 564, 667, 973, 1424, 2673, 2729
BmrI ACTGGG 1 cut(s) 1112
BmuI ACTGGG 1 cut(s) 1112
BoxI GACNNNNGTC 1 cut(s) 2613
BpiI GAAGAC 3 cut(s) 1453, 2464, 2855
BpmI CTGGAG 4 cut(s) 472, 998, 1476, 1671
Bpu10I CCTNAGC 1 cut(s) 1476
Bpu1102I GCTNAGC 2 cut(s) 402, 2109
BpuEI CTTGAG 1 cut(s) 2338
BpuMI CCSGG 1 cut(s) 947
BsaAI YACGTR 3 cut(s) 1111, 1562, 1643
BsaI GGTCTC 2 cut(s) 452, 679
BsaWI WCCGGW 2 cut(s) 1874, 2731
BsaXI ACNNNNNCTCC 8 cut(s) 481, 511, 1398, 1428, 1991, 2021, 2154, 2184
Bse118I RCCGGY 2 cut(s) 1303, 2731
Bse3DI GCAATG 4 cut(s) 324, 1842, 2421, 2946
BseBI CCWGG 9 cut(s) 437, 465, 971, 977, 1515, 2048, 2553, 2720, 2879
BseGI GGATG 9 cut(s) 35, 137, 184, 479, 955, 2312, 2767, 2913, 2925
BseMI GCAATG 4 cut(s) 324, 1842, 2421, 2946
BseRI GAGGAG 4 cut(s) 1613, 2451, 2618, 2943
BseSI GKGCMC 2 cut(s) 1271, 2094
BseYI CCCAGC 2 cut(s) 339, 1529
BsgI GTGCAG 2 cut(s) 2412, 2532
Bsh1285I CGRYCG 1 cut(s) 1879
BshNI GGYRCC 2 cut(s) 1266, 2091
BshTI ACCGGT 1 cut(s) 2731
BsiEI CGRYCG 1 cut(s) 1879
BsiHKAI GWGCWC 1 cut(s) 2646
BsiHKCI CYCGRG 3 cut(s) 762, 2433, 2593
BsiSI CCGG 4 cut(s) 947, 1304, 1875, 2732
BslFI GGGAC 6 cut(s) 80, 209, 968, 1199, 2489, 2576
BsmAI GTCTC 6 cut(s) 419, 452, 679, 1912, 1952, 2916
BsmBI CGTCTC 2 cut(s) 419, 1912
BsmFI GGGAC 6 cut(s) 80, 209, 968, 1199, 2489, 2576
BsmI GAATGC 1 cut(s) 1853
Bso31I GGTCTC 2 cut(s) 452, 679
BsoBI CYCGRG 3 cut(s) 762, 2433, 2593
Bsp1286I GDGCHC 5 cut(s) 769, 1271, 1890, 2094, 2646
Bsp1407I TGTACA 1 cut(s) 262
Bsp1720I GCTNAGC 2 cut(s) 402, 2109
Bsp19I CCATGG 3 cut(s) 567, 2661, 2676
BspHI TCATGA 1 cut(s) 1141
BspMAI CTGCAG 3 cut(s) 1066, 1414, 1432
BspMI ACCTGC 2 cut(s) 1435, 1507
BspPI GGATC 8 cut(s) 509, 824, 1103, 1462, 1676, 1689, 1996, 2700
BspT107I GGYRCC 2 cut(s) 1266, 2091
BspTNI GGTCTC 2 cut(s) 452, 679
BsrBI CCGCTC 2 cut(s) 1603, 2845
BsrDI GCAATG 4 cut(s) 324, 1842, 2421, 2946
BsrFI RCCGGY 2 cut(s) 1303, 2731
BsrGI TGTACA 1 cut(s) 262
BssAI RCCGGY 2 cut(s) 1303, 2731
BssSI CACGAG 1 cut(s) 867
BssT1I CCWWGG 9 cut(s) 174, 226, 442, 567, 1677, 1827, 2661, 2676, 2838
Bst2BI CACGAG 1 cut(s) 867
Bst2UI CCWGG 9 cut(s) 437, 465, 971, 977, 1515, 2048, 2553, 2720, 2879
Bst4CI ACNGT 5 cut(s) 607, 1190, 1576, 1963, 2513
BstAUI TGTACA 1 cut(s) 262
BstBAI YACGTR 3 cut(s) 1111, 1562, 1643
BstDSI CCRYGG 3 cut(s) 567, 2661, 2676
BstENI CCTNNNNNAGG 3 cut(s) 230, 1469, 1712
BstF5I GGATG 9 cut(s) 35, 137, 184, 479, 955, 2312, 2767, 2913, 2925
BstH2I RGCGCY 1 cut(s) 2917
BstHHI GCGC 2 cut(s) 1912, 2916
BstMAI GTCTC 6 cut(s) 419, 452, 679, 1912, 1952, 2916
BstMCI CGRYCG 1 cut(s) 1879
BstNI CCWGG 9 cut(s) 437, 465, 971, 977, 1515, 2048, 2553, 2720, 2879
BstNSI RCATGY 1 cut(s) 1839
BstPAI GACNNNNGTC 1 cut(s) 2613
BstSFI CTRYAG 4 cut(s) 690, 1062, 1410, 1428
BstSLI GKGCMC 2 cut(s) 1271, 2094
BstSNI TACGTA 1 cut(s) 1111
BstV2I GAAGAC 3 cut(s) 1453, 2464, 2855
BstX2I RGATCY 4 cut(s) 1095, 1681, 1988, 2692
BstXI CCANNNNNNTGG 5 cut(s) 192, 443, 1444, 1529, 2726
BstYI RGATCY 4 cut(s) 1095, 1681, 1988, 2692
BtgI CCRYGG 3 cut(s) 567, 2661, 2676
BtsCI GGATG 9 cut(s) 35, 137, 184, 479, 955, 2312, 2767, 2913, 2925
BtsIMutI CAGTG 8 cut(s) 681, 753, 839, 1155, 1572, 1695, 2518, 2779
BveI ACCTGC 2 cut(s) 1435, 1507
CaiI CAGNNNCTG 1 cut(s) 1499
CciI TCATGA 1 cut(s) 1141
CfoI GCGC 2 cut(s) 1912, 2916
Cfr10I RCCGGY 2 cut(s) 1303, 2731
Cfr13I GGNCC 9 cut(s) 85, 107, 439, 564, 667, 973, 1424, 2673, 2729
CsiI ACCWGGT 1 cut(s) 2551
Csp6I GTAC 3 cut(s) 34, 263, 1112
CspAI ACCGGT 1 cut(s) 2731
CviQI GTAC 3 cut(s) 34, 263, 1112
DraI TTTAAA 1 cut(s) 1813
DrdI GACNNNNNNGTC 1 cut(s) 74
DriI GACNNNNNGTC 1 cut(s) 2929
DseDI GACNNNNNNGTC 1 cut(s) 74
EaeI YGGCCR 2 cut(s) 21, 1801
Eam1105I GACNNNNNGTC 1 cut(s) 2929
EciI GGCGGA 1 cut(s) 1649
Eco105I TACGTA 1 cut(s) 1111
Eco130I CCWWGG 9 cut(s) 174, 226, 442, 567, 1677, 1827, 2661, 2676, 2838
Eco24I GRGCYC 2 cut(s) 769, 1890
Eco31I GGTCTC 2 cut(s) 452, 679
Eco47I GGWCC 3 cut(s) 107, 1424, 2729
Eco57I CTGAAG 5 cut(s) 45, 354, 681, 1076, 2777
Eco72I CACGTG 2 cut(s) 1562, 1643
Eco88I CYCGRG 3 cut(s) 762, 2433, 2593
EcoNI CCTNNNNNAGG 3 cut(s) 230, 1469, 1712
EcoO109I RGGNCCY 3 cut(s) 107, 439, 667
EcoRII CCWGG 9 cut(s) 435, 463, 969, 975, 1513, 2046, 2551, 2718, 2877
EcoT14I CCWWGG 9 cut(s) 174, 226, 442, 567, 1677, 1827, 2661, 2676, 2838
EcoT38I GRGCYC 2 cut(s) 769, 1890
ErhI CCWWGG 9 cut(s) 174, 226, 442, 567, 1677, 1827, 2661, 2676, 2838
Esp3I CGTCTC 2 cut(s) 419, 1912
FaqI GGGAC 6 cut(s) 80, 209, 968, 1199, 2489, 2576
FauI CCCGC 2 cut(s) 1175, 2895
FauNDI CATATG 2 cut(s) 1312, 2581
FbaI TGATCA 1 cut(s) 2278
FblI GTMKAC 2 cut(s) 615, 2190
FokI GGATG 9 cut(s) 42, 124, 191, 466, 962, 2299, 2774, 2912, 2920
FriOI GRGCYC 2 cut(s) 769, 1890
FspBI CTAG 4 cut(s) 387, 519, 1232, 2808
GlaI GCGC 2 cut(s) 1911, 2915
GsaI CCCAGC 2 cut(s) 343, 1533
GsuI CTGGAG 4 cut(s) 472, 998, 1476, 1671
HaeII RGCGCY 1 cut(s) 2917
HapII CCGG 4 cut(s) 947, 1304, 1875, 2732
HhaI GCGC 2 cut(s) 1912, 2916
Hin6I GCGC 2 cut(s) 1910, 2914
HinP1I GCGC 2 cut(s) 1910, 2914
HincII GTYRAC 2 cut(s) 910, 2191
HindII GTYRAC 2 cut(s) 910, 2191
HpaII CCGG 4 cut(s) 947, 1304, 1875, 2732
HphI GGTGA 8 cut(s) 314, 524, 755, 1493, 1546, 2087, 2288, 2378
Hpy166II GTNNAC 5 cut(s) 253, 616, 910, 1229, 2191
Hpy8I GTNNAC 5 cut(s) 253, 616, 910, 1229, 2191
HpyCH4III ACNGT 5 cut(s) 607, 1190, 1576, 1963, 2513
HpyCH4IV ACGT 5 cut(s) 412, 1008, 1110, 1561, 1642
HpySE526I ACGT 5 cut(s) 412, 1008, 1110, 1561, 1642
HspAI GCGC 2 cut(s) 1910, 2914
KroI GCCGGC 1 cut(s) 1303
KroNI GCCGGC 1 cut(s) 1305
Ksp22I TGATCA 1 cut(s) 2278
MabI ACCWGGT 1 cut(s) 2551
MaeI CTAG 4 cut(s) 387, 519, 1232, 2808
MaeII ACGT 5 cut(s) 412, 1008, 1110, 1561, 1642
MaeIII GTNAC 6 cut(s) 302, 1120, 2227, 2366, 2517, 2743
MbiI CCGCTC 2 cut(s) 1603, 2845
MfeI CAATTG 1 cut(s) 1905
MflI RGATCY 4 cut(s) 1095, 1681, 1988, 2692
MhlI GDGCHC 5 cut(s) 769, 1271, 1890, 2094, 2646
MlsI TGGCCA 1 cut(s) 1803
MluNI TGGCCA 1 cut(s) 1803
MlyI GAGTC 8 cut(s) 62, 484, 547, 950, 1350, 1449, 2009, 2740
Mox20I TGGCCA 1 cut(s) 1803
MroNI GCCGGC 1 cut(s) 1303
MroXI GAANNNNTTC 1 cut(s) 1669
MscI TGGCCA 1 cut(s) 1803
MseI TTAA 9 cut(s) 360, 773, 1248, 1812, 2352, 2586, 2636, 2651, 2712
MslI CAYNNNNRTG 2 cut(s) 190, 882
Msp20I TGGCCA 1 cut(s) 1803
MspA1I CMGCKG 4 cut(s) 17, 1529, 2186, 2273
MspI CCGG 4 cut(s) 947, 1304, 1875, 2732
MunI CAATTG 1 cut(s) 1905
Mva1269I GAATGC 1 cut(s) 1853
MvaI CCWGG 9 cut(s) 437, 465, 971, 977, 1515, 2048, 2553, 2720, 2879
NaeI GCCGGC 1 cut(s) 1305
NciI CCSGG 1 cut(s) 947
NcoI CCATGG 3 cut(s) 567, 2661, 2676
NdeI CATATG 2 cut(s) 1312, 2581
NgoMIV GCCGGC 1 cut(s) 1303
NmuCI GTSAC 3 cut(s) 302, 2366, 2743
NspI RCATGY 1 cut(s) 1839
PaeR7I CTCGAG 2 cut(s) 762, 2433
PagI TCATGA 1 cut(s) 1141
PaqCI CACCTGC 1 cut(s) 1507
PasI CCCWGGG 1 cut(s) 436
PctI GAATGC 1 cut(s) 1853
PdiI GCCGGC 1 cut(s) 1305
PdmI GAANNNNTTC 1 cut(s) 1669
PfeI GAWTC 5 cut(s) 1208, 1433, 1637, 1822, 2447
PflFI GACNNNGTC 2 cut(s) 1190, 2372
PflMI CCANNNNNTGG 1 cut(s) 30
PfoI TCCNGGA 1 cut(s) 2877
PinAI ACCGGT 1 cut(s) 2731
PleI GAGTC 8 cut(s) 62, 484, 546, 950, 1350, 1448, 2008, 2740
PmaCI CACGTG 2 cut(s) 1562, 1643
PmlI CACGTG 2 cut(s) 1562, 1643
PpsI GAGTC 8 cut(s) 62, 484, 546, 950, 1350, 1448, 2008, 2740
Ppu21I YACGTR 3 cut(s) 1111, 1562, 1643
PpuMI RGGWCCY 1 cut(s) 107
PshAI GACNNNNGTC 1 cut(s) 2613
Psp5II RGGWCCY 1 cut(s) 107
Psp6I CCWGG 9 cut(s) 435, 463, 969, 975, 1513, 2046, 2551, 2718, 2877
PspCI CACGTG 2 cut(s) 1562, 1643
PspFI CCCAGC 2 cut(s) 339, 1529
PspGI CCWGG 9 cut(s) 435, 463, 969, 975, 1513, 2046, 2551, 2718, 2877
PspPI GGNCC 9 cut(s) 85, 107, 439, 564, 667, 973, 1424, 2673, 2729
PspPPI RGGWCCY 1 cut(s) 107
PspXI VCTCGAGB 2 cut(s) 762, 2433
PstI CTGCAG 3 cut(s) 1066, 1414, 1432
PstNI CAGNNNCTG 1 cut(s) 1499
PsuI RGATCY 4 cut(s) 1095, 1681, 1988, 2692
PsyI GACNNNGTC 2 cut(s) 1190, 2372
PvuII CAGCTG 4 cut(s) 17, 1529, 2186, 2273
RsaI GTAC 3 cut(s) 35, 264, 1113
RsaNI GTAC 3 cut(s) 34, 263, 1112
RseI CAYNNNNRTG 2 cut(s) 190, 882
SalI GTCGAC 1 cut(s) 2189
SaqAI TTAA 9 cut(s) 360, 773, 1248, 1812, 2352, 2586, 2636, 2651, 2712
Sau96I GGNCC 9 cut(s) 85, 107, 439, 564, 667, 973, 1424, 2673, 2729
SchI GAGTC 8 cut(s) 62, 484, 547, 950, 1350, 1449, 2009, 2740
SduI GDGCHC 5 cut(s) 769, 1271, 1890, 2094, 2646
SexAI ACCWGGT 1 cut(s) 2551
SfcI CTRYAG 4 cut(s) 690, 1062, 1410, 1428
Sfr274I CTCGAG 2 cut(s) 762, 2433
SinI GGWCC 3 cut(s) 107, 1424, 2729
SlaI CTCGAG 2 cut(s) 762, 2433
SmiMI CAYNNNNRTG 2 cut(s) 190, 882
SmlI CTYRAG 3 cut(s) 762, 2317, 2433
SmoI CTYRAG 3 cut(s) 762, 2317, 2433
SnaBI TACGTA 1 cut(s) 1111
SspMI CTAG 4 cut(s) 387, 519, 1232, 2808
StyI CCWWGG 9 cut(s) 174, 226, 442, 567, 1677, 1827, 2661, 2676, 2838
TaaI ACNGT 5 cut(s) 607, 1190, 1576, 1963, 2513
TaiI ACGT 5 cut(s) 415, 1011, 1113, 1564, 1645
TaqI TCGA 5 cut(s) 763, 1956, 2190, 2434, 2859
TatI WGTACW 1 cut(s) 262
TauI GCSGC 3 cut(s) 23, 1051, 1054
TfiI GAWTC 5 cut(s) 1208, 1433, 1637, 1822, 2447
Tru1I TTAA 9 cut(s) 360, 773, 1248, 1812, 2352, 2586, 2636, 2651, 2712
Tru9I TTAA 9 cut(s) 360, 773, 1248, 1812, 2352, 2586, 2636, 2651, 2712
TscAI CASTG 8 cut(s) 681, 760, 846, 1162, 1579, 1695, 2518, 2779
TseFI GTSAC 3 cut(s) 302, 2366, 2743
Tsp45I GTSAC 3 cut(s) 302, 2366, 2743
TspDTI ATGAA 3 cut(s) 1130, 1494, 1914
TspRI CASTG 8 cut(s) 681, 760, 846, 1162, 1579, 1695, 2518, 2779
Tth111I GACNNNGTC 2 cut(s) 1190, 2372
Van91I CCANNNNNTGG 1 cut(s) 30
VpaK11BI GGWCC 3 cut(s) 107, 1424, 2729
XagI CCTNNNNNAGG 3 cut(s) 230, 1469, 1712
XapI RAATTY 9 cut(s) 281, 914, 1126, 1150, 1770, 2054, 2062, 2139, 2255
XceI RCATGY 1 cut(s) 1839
XcmI CCANNNNNNNNNTGG 2 cut(s) 541, 1154
XhoI CTCGAG 2 cut(s) 762, 2433
XmiI GTMKAC 2 cut(s) 615, 2190
XmnI GAANNNNTTC 1 cut(s) 1669
XspI CTAG 4 cut(s) 387, 519, 1232, 2808
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.