FvH4_5g09960

Staphylococcal nuclease domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0004359
Physical Location & Seq
Reverse (-)
5676720 .. 5683119
6400 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g09960.t1

Sequence Viewer

Length: 2988 bp
ATGGCATCGTCAACAGCTGGGTCCACGGGGTGGTTGAGAGGGAGGGTGAAGGCCGTTACGTCCGGCGATTGCCTTGTCATCATGGCTCTTACCTCTAGCAAGCCCGGACCACCACCTGAAAAAACCATCACGCTCTCATCGCTTATGGCTCCCAAGCTGGCCCGTAGAGGCGGCATTGATGAGCCATTTGCATGGGAGAGCAGAGAGTACCTGAGGAAGCTCTGCATAGGAAAGGAGGTGACTTTCAAGGTGGACTATACGGTATCATCCATAGGGCGTGATTTTGGCTCTGTTTTCCTTGGTGACAAAAATGTTGCCATGCTTGTTGTTTCTCAAGGCTGGGCAAAGGTCCGGGAGCAACCTAACCAACCGAAACAGGGGCAACAGAAAATAGAAGCCAGTCCTTTCATTGCAGAACTGCTCCAACTCGAAGAGCAGGCAAAGACCCAGGGCCTTGGTCGCTGGAGCAAGGTTCCAGGTGCTGCTGAGGAATCTATTAGGAATCTACCTCCCTCTGCTATTGGCGATCCTAGCAAATTAGATGCCATGAGTCTGTTAAATGCAAACAAGGGCAAGCCCATGGAAGCTATTGTTGAGCAGGTTCGTGATGGCAGTACAGTCCGGGTCTACTTGCTTCCTGAGTTTCAGTTCGTCCAAGTATTTGTAGCCGGAATTCAGGCCCCATCAGTGGGAAGGAGATCTATCCCAACAGAAACCGTCCCTGAAGCAGAAACGACCTCAGATAAAACAAATGAAGATGTCTCTGCTGAACCTCGAGCCCCTCTTACCTCTGCACAAAGGATTGCAGCTTCAACAGTATCGACCACGGAAACTGTTGCGGATCCATTTGCACTAGAAGCTAAATACTTTACGGAAATTCGTGTGTTGAATAGAGACGTTCGCATTGTTCTGGAAGGCGTTGACAAATTCAGCAATTTGATCGGGTCAGTATACTACCCTGATGGGGACTCCGCAAAAGACTTGGCGCTGGAGCTTGTGGAACATGGTTATGCAAAATATGTTGAATGGAGCGCAAACATGATGGAGGAAGAACCAAAGAAGCGGCTGAAGACTGCAGAGCTTCAAGCTAAGAAAAGCAAGTTGAAGATTTGGACAAACTATGTACCTCCGGCAACAAATTCGAAGCCAATTCATAACCAGAACTTTACAGGAAAGGTTGTGGAGGTTGTAAGTGGTGACTGTGTTATTGTGGCCGATGATTCTATTCCATATGGTAGTCCCCTAGCAGAGAGGAGAGTAAATCTTTCGAGTATTAGGTGTCCAAAAATGGGTAATCCTCGTAAAGAGGAAAAGCCAGCTGCATATGCCCGTGAAGCAAAGGAGTTCCTTAGAACACGCCTTATTGGACGCCAAGTCAATGTCCAAATGGAGTACTCGAGAAAGGTCAGCCCAGCAGATGGAGCTACAGTTGCTAATGGACCTACAGATTCCAGGATAATGGATTTTGGATCAGTCTTCCTTGCAACCCCTAGTAAAGCTGAGGGAGATGATGCAGCAACTCCTGCTTCATCAGCCAGCCAGCAGTCTGGGGTGAATGTTGCTGAGCTTGTGGTTGCACGTGGCTTTGGTAGTGTTATTAGACATCGAGATTTTGAGGAGAGATCAAGCTATTATGATGCCCTTCTTTCTGCGGAGGCACGTGCTACTGCTGGCAAGAAAGGAATGCATTCTTCCAAGGAACCCCCAGCCATGCACATAACAGACCTAACAACGGCATCGGCCAAGAAGGCCAGAGATTTCTTGCCATTCTTACATCGAAGTAGGAGAATCCCTGCTGTTGTGGAATATGTGCTCAGTGGTCATCGATTTAAACTATTGGTTCCTAAGGAAACATGTAGCATTGCTTTCTCGTTCTCTGGTGTAAGATGTCCTGGTCGTGATGAGCCCTATTCGAATGAAGCAATTGCACTAATGAGGCGAAGAATAATGCAGAGAGATGTTGAGATTGAGGTGGAAACTGTTGATAGAACTGGAACTTTCTTGGGATCTTTATGGGAATCGAGGACAAATATGGCGATTGCCCTCGTTGAAGCTGGTCTTGCAAAATATACATCCTTTGCAGGCAGTGACAGGATCCCAGATGCCCACCTGCTTGAACAAGCTGAGAAAAATGCAAAAAATAAGAAACTGAAAATTTGGGAGAACTATGTTGAGGGAGAGGAAGTTCCAAATGGTAAACCAACTGATACCAAACAGAAGGAAGTGCTTAAGGTAGTAGTTACAGAAGTCCTGGAGGGTGGTAAATTTTATGTTCAGACAGTTGGGGACCAGAAGATATCTTCTATTCAGCAACAGCTTGCTTCTTTGAACCTTCAAGAAGCTCCTTTAATTGGTGCTTTTAATCCAAAGAAGGGTGATGTTGTCCTTGCTCAATTTAGTGCAGATAATTCCTGGAACCGAGCAATGATTGTCAATGGTCCTCGAGGACCAGTGGAATCCGCTAAAGACAACTTTGAAGTGTTCTACATAGATTATGGTAATCAAGAGTTTGTCCCGTACAGTCAGTTACGGCCTCTTGATTCTTCTGTTTCCGCAACACCTGGTCTTGCCCAACTTTGCAGCCTTGCATATCTTAAGGTCCCCACCTTGACCCAGGACCATGGTGAAGAAGCAGCAGAGTTTTTGAGTGAGTACACATTATCCAAAGAGTTTTCGGCCATGATTGAGGACCGGGACTTGACAGGAGGCAAAGTTAAAGGCCAGGGAACTGGACCTGTTCTTTTGGTAACTCTAGTTGCTGCTAATGAAGAGATCAGTATAAATGCTGCCATGCTCCAGGAGGGACTTGCTAGGCTAGAGAAGAAGAAGAAATTTGACACCAAGGATCGCAAGGCGGCACTCGACAACTTGGAGAAGTTCCAGGAAGAAGCACAGACTAATCGACGAGGGAACTGGCAGTATGGACATTATGATTCCGAAGAAGAGGAAATTGTTCCTCCTGTCAAAAAGGGTGTTGGCAAGCGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000932 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003824 GO:0004518 GO:0005488 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005737 GO:0005783 GO:0005829 GO:0005886 GO:0005911 GO:0006082 GO:0006139 GO:0006396 GO:0006397 GO:0006401 GO:0006402 GO:0006629 GO:0006720 GO:0006721 GO:0006725 GO:0006807 GO:0006950 GO:0006970 GO:0007275 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009056 GO:0009057 GO:0009058 GO:0009266 GO:0009408 GO:0009506 GO:0009507 GO:0009536 GO:0009628 GO:0009651 GO:0009685 GO:0009686 GO:0009791 GO:0009845 GO:0009889 GO:0009891 GO:0009892 GO:0009893 GO:0009987 GO:0010035 GO:0010038 GO:0010371 GO:0010372 GO:0010467 GO:0010468 GO:0010494 GO:0010565 GO:0010605 GO:0010629 GO:0010817 GO:0012505 GO:0016020 GO:0016053 GO:0016070 GO:0016071 GO:0016101 GO:0016102 GO:0016114 GO:0016787 GO:0016788 GO:0019216 GO:0019222 GO:0019439 GO:0019747 GO:0019752 GO:0030054 GO:0030312 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031967 GO:0031975 GO:0032350 GO:0032352 GO:0032501 GO:0032502 GO:0032991 GO:0033554 GO:0034605 GO:0034641 GO:0034655 GO:0035770 GO:0036464 GO:0042221 GO:0042445 GO:0042446 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043436 GO:0043455 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044255 GO:0044260 GO:0044265 GO:0044270 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045828 GO:0045834 GO:0046394 GO:0046483 GO:0046686 GO:0046700 GO:0046885 GO:0046886 GO:0046889 GO:0046890 GO:0048518 GO:0048519 GO:0048522 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0055044 GO:0060255 GO:0062012 GO:0062013 GO:0065007 GO:0065008 GO:0071704 GO:0071944 GO:0080090 GO:0090304 GO:0090305 GO:0090351 GO:0097159 GO:1901360 GO:1901361 GO:1901363 GO:1901575 GO:1901576 GO:1990904
KEGG Pathways
Metabolic & Signaling
ko05169 ko05203 map05169 map05203
Pfam Domains
Protein Families
SNase TUDOR

Protein Analysis

996

Amino Acids

109.33

Weight (kDa)

7.15

Isoelectric Point (pI)

41.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SNase PF00565 42 - 157 3.3e-09 Staphylococcal nuclease homologue
SNase PF00565 274 - 372 6.5e-14 Staphylococcal nuclease homologue
SNase PF00565 624 - 722 5.3e-15 Staphylococcal nuclease homologue
TUDOR PF00567 740 - 863 3.2e-20 Tudor domain
SNase PF00565 869 - 973 2.9e-07 Staphylococcal nuclease homologue
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2118
AbsI CCTCGAGG 1 cut(s) 2442
Acc36I ACCTGC 2 cut(s) 589, 2118
AccB7I CCANNNNNTGG 2 cut(s) 30, 1418
AccI GTMKAC 2 cut(s) 627, 951
AciI CCGC 8 cut(s) 171, 839, 972, 1063, 1652, 2460, 2553, 2855
AclWI GGATC 8 cut(s) 521, 836, 849, 1477, 2014, 2089, 2102, 2853
AcoI YGGCCR 3 cut(s) 1212, 1740, 2676
AcsI RAATTY 7 cut(s) 672, 876, 926, 1138, 2154, 2264, 2831
AcuI CTGAAG 2 cut(s) 744, 1088
AcvI CACGTG 2 cut(s) 1580, 1661
AcyI GRCGYC 1 cut(s) 1369
AdeI CACNNNGTG 1 cut(s) 30
AfaI GTAC 6 cut(s) 209, 616, 1125, 1394, 2519, 2654
AflII CTTAAG 2 cut(s) 2228, 2594
AflIII ACRYGT 1 cut(s) 1853
AhdI GACNNNNNGTC 1 cut(s) 1373
AloI GAACNNNNNNTCC 2 cut(s) 2169, 2201
Alw21I GWGCWC 1 cut(s) 1815
Alw26I GTCTC 2 cut(s) 766, 888
AlwI GGATC 8 cut(s) 521, 836, 849, 1477, 2014, 2089, 2102, 2853
AlwNI CAGNNNCTG 1 cut(s) 482
Ama87I CYCGRG 3 cut(s) 774, 1396, 2442
ApeKI GCWGC 8 cut(s) 482, 806, 1319, 1514, 2580, 2633, 2759, 2786
ApoI RAATTY 7 cut(s) 672, 876, 926, 1138, 2154, 2264, 2831
Asp700I GAANNNNTTC 2 cut(s) 1687, 2952
AspLEI GCGC 2 cut(s) 988, 1034
AsuC2I CCSGG 4 cut(s) 105, 353, 623, 2693
AsuHPI GGTGA 7 cut(s) 58, 250, 314, 1208, 1564, 2387, 2636
AsuII TTCGAA 2 cut(s) 1142, 1913
AvaI CYCGRG 3 cut(s) 774, 1396, 2442
AxyI CCTNAGG 2 cut(s) 212, 1845
BamHI GGATCC 2 cut(s) 841, 2094
BanII GRGCYC 2 cut(s) 781, 1908
BbrPI CACGTG 2 cut(s) 1580, 1661
BbsI GAAGAC 2 cut(s) 1076, 1468
Bbv12I GWGCWC 1 cut(s) 1815
BbvCI CCTCAGC 2 cut(s) 486, 1500
BbvI GCAGC 8 cut(s) 469, 818, 1306, 1526, 2592, 2645, 2746, 2773
BccI CCATC 6 cut(s) 134, 602, 691, 956, 1036, 1412
BceAI ACGGC 3 cut(s) 38, 1749, 2546
BcgI CGANNNNNNTGC 4 cut(s) 922, 956, 1122, 1156
BcnI CCSGG 4 cut(s) 105, 353, 623, 2693
BcoDI GTCTC 2 cut(s) 766, 888
BfaI CTAG 8 cut(s) 96, 531, 854, 1244, 1491, 2753, 2811, 2816
BfmI CTRYAG 3 cut(s) 1074, 1425, 1443
BfoI RGCGCY 1 cut(s) 989
BfrI CTTAAG 2 cut(s) 2228, 2594
BfuAI ACCTGC 2 cut(s) 589, 2118
BglI GCCNNNNNGGC 1 cut(s) 1748
BglII AGATCT 1 cut(s) 698
BlpI GCTNAGC 1 cut(s) 1563
BmcAI AGTACT 1 cut(s) 1394
BmeRI GACNNNNNGTC 1 cut(s) 1373
BmeT110I CYCGRG 3 cut(s) 774, 1396, 2442
BmsI GCATC 6 cut(s) 14, 532, 1501, 1627, 1745, 2092
BpiI GAAGAC 2 cut(s) 1076, 1468
BpmI CTGGAG 4 cut(s) 484, 1010, 2273, 2780
Bpu10I CCTNAGC 2 cut(s) 486, 1500
Bpu1102I GCTNAGC 1 cut(s) 1563
Bpu14I TTCGAA 2 cut(s) 1142, 1913
BpuEI CTTGAG 1 cut(s) 318
BpuMI CCSGG 4 cut(s) 105, 353, 623, 2693
Bsa29I ATCGAT 1 cut(s) 1825
BsaAI YACGTR 2 cut(s) 1580, 1661
BsaHI GRCGYC 1 cut(s) 1369
BsaXI ACNNNNNCTCC 6 cut(s) 1413, 1443, 2169, 2199, 2697, 2727
Bse1I ACTGG 5 cut(s) 399, 1996, 2450, 2734, 2918
Bse21I CCTNAGG 2 cut(s) 212, 1845
Bse3DI GCAATG 3 cut(s) 408, 1860, 2430
BseCI ATCGAT 1 cut(s) 1825
BseGI GGATG 2 cut(s) 266, 2072
BseMI GCAATG 3 cut(s) 408, 1860, 2430
BseMII CTCAG 8 cut(s) 203, 477, 630, 753, 1491, 1554, 1828, 2115
BseNI ACTGG 5 cut(s) 399, 1996, 2450, 2734, 2918
BseRI GAGGAG 2 cut(s) 1267, 1631
BseXI GCAGC 8 cut(s) 469, 818, 1306, 1526, 2592, 2645, 2746, 2773
BseYI CCCAGC 4 cut(s) 17, 339, 1411, 1705
BsgI GTGCAG 2 cut(s) 777, 2421
BshVI ATCGAT 1 cut(s) 1825
BsiHKAI GWGCWC 1 cut(s) 1815
BsiHKCI CYCGRG 3 cut(s) 774, 1396, 2442
BsiSI CCGG 7 cut(s) 63, 105, 352, 622, 669, 1130, 2692
BslFI GGGAC 8 cut(s) 704, 980, 1224, 2300, 2498, 2585, 2708, 2817
BsmAI GTCTC 2 cut(s) 766, 888
BsmBI CGTCTC 1 cut(s) 888
BsmFI GGGAC 8 cut(s) 704, 980, 1224, 2300, 2498, 2585, 2708, 2817
BsmI GAATGC 2 cut(s) 1687, 1689
BsoBI CYCGRG 3 cut(s) 774, 1396, 2442
Bsp119I TTCGAA 2 cut(s) 1142, 1913
Bsp1286I GDGCHC 3 cut(s) 781, 1815, 1908
Bsp1720I GCTNAGC 1 cut(s) 1563
Bsp19I CCATGG 2 cut(s) 579, 2620
BspACI CCGC 8 cut(s) 171, 839, 972, 1063, 1652, 2460, 2553, 2855
BspCNI CTCAG 8 cut(s) 204, 478, 631, 752, 1492, 1555, 1827, 2116
BspDI ATCGAT 1 cut(s) 1825
BspMAI CTGCAG 1 cut(s) 1078
BspMI ACCTGC 2 cut(s) 589, 2118
BspPI GGATC 8 cut(s) 521, 836, 849, 1477, 2014, 2089, 2102, 2853
BspQI GCTCTTC 1 cut(s) 426
BspT104I TTCGAA 2 cut(s) 1142, 1913
BspTI CTTAAG 2 cut(s) 2228, 2594
BsrDI GCAATG 3 cut(s) 408, 1860, 2430
BsrI ACTGG 5 cut(s) 399, 1996, 2450, 2734, 2918
BssNAI GTATAC 1 cut(s) 952
BssNI GRCGYC 1 cut(s) 1369
BssT1I CCWWGG 6 cut(s) 298, 454, 579, 1695, 2620, 2841
Bst1107I GTATAC 1 cut(s) 952
Bst6I CTCTTC 3 cut(s) 426, 2763, 2937
BstACI GRCGYC 1 cut(s) 1369
BstAFI CTTAAG 2 cut(s) 2228, 2594
BstAPI GCANNNNNTGC 1 cut(s) 1523
BstBAI YACGTR 2 cut(s) 1580, 1661
BstBI TTCGAA 2 cut(s) 1142, 1913
BstDSI CCRYGG 4 cut(s) 24, 579, 825, 2620
BstF5I GGATG 2 cut(s) 266, 2072
BstH2I RGCGCY 1 cut(s) 989
BstHHI GCGC 2 cut(s) 988, 1034
BstMAI GTCTC 2 cut(s) 766, 888
BstNSI RCATGY 1 cut(s) 1857
BstSFI CTRYAG 3 cut(s) 1074, 1425, 1443
BstV1I GCAGC 8 cut(s) 469, 818, 1306, 1526, 2592, 2645, 2746, 2773
BstV2I GAAGAC 2 cut(s) 1076, 1468
BstX2I RGATCY 4 cut(s) 698, 841, 2006, 2094
BstXI CCANNNNNNTGG 6 cut(s) 192, 455, 1459, 1547, 2621, 2729
BstYI RGATCY 4 cut(s) 698, 841, 2006, 2094
BstZ17I GTATAC 1 cut(s) 952
Bsu15I ATCGAT 1 cut(s) 1825
Bsu36I CCTNAGG 2 cut(s) 212, 1845
BsuTUI ATCGAT 1 cut(s) 1825
BtgI CCRYGG 4 cut(s) 24, 579, 825, 2620
BtgZI GCGATG 1 cut(s) 123
BtsCI GGATG 2 cut(s) 266, 2072
BtsI GCAGTG 1 cut(s) 2092
BtsIMutI CAGTG 4 cut(s) 693, 1822, 2092, 2457
BveI ACCTGC 2 cut(s) 589, 2118
CaiI CAGNNNCTG 1 cut(s) 482
CfoI GCGC 2 cut(s) 988, 1034
ClaI ATCGAT 1 cut(s) 1825
CseI GACGC 1 cut(s) 1377
CsiI ACCWGGT 1 cut(s) 2560
Csp6I GTAC 6 cut(s) 208, 615, 1124, 1393, 2518, 2653
CviQI GTAC 6 cut(s) 208, 615, 1124, 1393, 2518, 2653
DraI TTTAAA 1 cut(s) 1831
DraIII CACNNNGTG 1 cut(s) 30
DriI GACNNNNNGTC 1 cut(s) 1373
EaeI YGGCCR 3 cut(s) 1212, 1740, 2676
Eam1104I CTCTTC 3 cut(s) 426, 2763, 2937
Eam1105I GACNNNNNGTC 1 cut(s) 1373
EarI CTCTTC 3 cut(s) 426, 2763, 2937
Eco130I CCWWGG 6 cut(s) 298, 454, 579, 1695, 2620, 2841
Eco24I GRGCYC 2 cut(s) 781, 1908
Eco32I GATATC 1 cut(s) 2298
Eco57I CTGAAG 2 cut(s) 744, 1088
Eco72I CACGTG 2 cut(s) 1580, 1661
Eco81I CCTNAGG 2 cut(s) 212, 1845
Eco88I CYCGRG 3 cut(s) 774, 1396, 2442
EcoO109I RGGNCCY 3 cut(s) 451, 679, 2599
EcoRI GAATTC 1 cut(s) 672
EcoRV GATATC 1 cut(s) 2298
EcoT14I CCWWGG 6 cut(s) 298, 454, 579, 1695, 2620, 2841
EcoT22I ATGCAT 1 cut(s) 1689
EcoT38I GRGCYC 2 cut(s) 781, 1908
ErhI CCWWGG 6 cut(s) 298, 454, 579, 1695, 2620, 2841
Esp3I CGTCTC 1 cut(s) 888
FalI AAGNNNNNCTT 2 cut(s) 2043, 2075
FaqI GGGAC 8 cut(s) 704, 980, 1224, 2300, 2498, 2585, 2708, 2817
FauNDI CATATG 2 cut(s) 1231, 1324
FblI GTMKAC 2 cut(s) 627, 951
FokI GGATG 2 cut(s) 253, 2059
FriOI GRGCYC 2 cut(s) 781, 1908
FspBI CTAG 8 cut(s) 96, 531, 854, 1244, 1491, 2753, 2811, 2816
GlaI GCGC 2 cut(s) 987, 1033
GsaI CCCAGC 4 cut(s) 21, 343, 1415, 1709
GsuI CTGGAG 4 cut(s) 484, 1010, 2273, 2780
HaeII RGCGCY 1 cut(s) 989
HapII CCGG 7 cut(s) 63, 105, 352, 622, 669, 1130, 2692
HgaI GACGC 1 cut(s) 1377
HhaI GCGC 2 cut(s) 988, 1034
Hin1I GRCGYC 1 cut(s) 1369
Hin6I GCGC 2 cut(s) 986, 1032
HinP1I GCGC 2 cut(s) 986, 1032
HincII GTYRAC 2 cut(s) 12, 922
HindII GTYRAC 2 cut(s) 12, 922
HpaII CCGG 7 cut(s) 63, 105, 352, 622, 669, 1130, 2692
HphI GGTGA 7 cut(s) 58, 250, 314, 1208, 1564, 2387, 2636
Hpy166II GTNNAC 8 cut(s) 12, 24, 253, 628, 922, 952, 2198, 2655
Hpy188I TCNGA 3 cut(s) 742, 2277, 2938
Hpy188III TCNNGA 9 cut(s) 605, 638, 911, 1398, 1607, 1898, 2336, 2504, 2537
Hpy8I GTNNAC 8 cut(s) 12, 24, 253, 628, 922, 952, 2198, 2655
Hpy99I CGWCG 1 cut(s) 2907
HpyAV CCTTC 8 cut(s) 43, 687, 908, 1652, 1741, 2212, 2342, 2365
HpyCH4IV ACGT 4 cut(s) 59, 897, 1579, 1660
HpySE526I ACGT 4 cut(s) 59, 897, 1579, 1660
Hsp92I GRCGYC 1 cut(s) 1369
HspAI GCGC 2 cut(s) 986, 1032
LguI GCTCTTC 1 cut(s) 426
LmnI GCTCC 9 cut(s) 154, 355, 426, 465, 991, 1029, 1421, 2347, 2799
Lsp1109I GCAGC 8 cut(s) 469, 818, 1306, 1526, 2592, 2645, 2746, 2773
LweI GCATC 6 cut(s) 14, 532, 1501, 1627, 1745, 2092
MabI ACCWGGT 1 cut(s) 2560
MaeI CTAG 8 cut(s) 96, 531, 854, 1244, 1491, 2753, 2811, 2816
MaeII ACGT 4 cut(s) 59, 897, 1579, 1660
MaeIII GTNAC 8 cut(s) 55, 238, 302, 1196, 2087, 2239, 2526, 2746
MfeI CAATTG 1 cut(s) 1923
MflI RGATCY 4 cut(s) 698, 841, 2006, 2094
MhlI GDGCHC 3 cut(s) 781, 1815, 1908
MlyI GAGTC 2 cut(s) 559, 962
MmeI TCCRAC 1 cut(s) 448
Mph1103I ATGCAT 1 cut(s) 1689
MroXI GAANNNNTTC 2 cut(s) 1687, 2952
MseI TTAA 7 cut(s) 557, 1830, 2229, 2348, 2361, 2595, 2715
MslI CAYNNNNRTG 2 cut(s) 190, 1008
MspA1I CMGCKG 2 cut(s) 17, 1319
MspCI CTTAAG 2 cut(s) 2228, 2594
MspI CCGG 7 cut(s) 63, 105, 352, 622, 669, 1130, 2692
MunI CAATTG 1 cut(s) 1923
Mva1269I GAATGC 2 cut(s) 1687, 1689
NciI CCSGG 4 cut(s) 105, 353, 623, 2693
NcoI CCATGG 2 cut(s) 579, 2620
NdeI CATATG 2 cut(s) 1231, 1324
NmuCI GTSAC 4 cut(s) 238, 302, 1196, 2087
NsiI ATGCAT 1 cut(s) 1689
NspI RCATGY 1 cut(s) 1857
NspV TTCGAA 2 cut(s) 1142, 1913
PaeR7I CTCGAG 3 cut(s) 774, 1396, 2442
PaqCI CACCTGC 1 cut(s) 2118
PasI CCCWGGG 1 cut(s) 448
PciI ACATGT 1 cut(s) 1853
PciSI GCTCTTC 1 cut(s) 426
PctI GAATGC 2 cut(s) 1687, 1689
PdmI GAANNNNTTC 2 cut(s) 1687, 2952
PfeI GAWTC 9 cut(s) 491, 502, 1220, 1448, 1788, 2018, 2456, 2540, 2933
PflMI CCANNNNNTGG 2 cut(s) 30, 1418
PfoI TCCNGGA 6 cut(s) 351, 1451, 2250, 2411, 2796, 2880
PleI GAGTC 2 cut(s) 558, 962
PmaCI CACGTG 2 cut(s) 1580, 1661
PmlI CACGTG 2 cut(s) 1580, 1661
PpsI GAGTC 2 cut(s) 558, 962
Ppu21I YACGTR 2 cut(s) 1580, 1661
PpuMI RGGWCCY 1 cut(s) 2599
PscI ACATGT 1 cut(s) 1853
Psp5II RGGWCCY 1 cut(s) 2599
PspCI CACGTG 2 cut(s) 1580, 1661
PspFI CCCAGC 4 cut(s) 17, 339, 1411, 1705
PspPPI RGGWCCY 1 cut(s) 2599
PspXI VCTCGAGB 2 cut(s) 774, 2442
PstI CTGCAG 1 cut(s) 1078
PstNI CAGNNNCTG 1 cut(s) 482
PsuI RGATCY 4 cut(s) 698, 841, 2006, 2094
PvuII CAGCTG 2 cut(s) 17, 1319
RsaI GTAC 6 cut(s) 209, 616, 1125, 1394, 2519, 2654
RsaNI GTAC 6 cut(s) 208, 615, 1124, 1393, 2518, 2653
RseI CAYNNNNRTG 2 cut(s) 190, 1008
SapI GCTCTTC 1 cut(s) 426
SaqAI TTAA 7 cut(s) 557, 1830, 2229, 2348, 2361, 2595, 2715
ScaI AGTACT 1 cut(s) 1394
SchI GAGTC 2 cut(s) 559, 962
SduI GDGCHC 3 cut(s) 781, 1815, 1908
SexAI ACCWGGT 1 cut(s) 2560
SfaNI GCATC 6 cut(s) 14, 532, 1501, 1627, 1745, 2092
SfcI CTRYAG 3 cut(s) 1074, 1425, 1443
SfiI GGCCNNNNNGGCC 1 cut(s) 1748
Sfr274I CTCGAG 3 cut(s) 774, 1396, 2442
SfuI TTCGAA 2 cut(s) 1142, 1913
SlaI CTCGAG 3 cut(s) 774, 1396, 2442
SmiMI CAYNNNNRTG 2 cut(s) 190, 1008
SmlI CTYRAG 6 cut(s) 333, 774, 1396, 2228, 2442, 2594
SmoI CTYRAG 6 cut(s) 333, 774, 1396, 2228, 2442, 2594
SsiI CCGC 8 cut(s) 171, 839, 972, 1063, 1652, 2460, 2553, 2855
SspMI CTAG 8 cut(s) 96, 531, 854, 1244, 1491, 2753, 2811, 2816
StyI CCWWGG 6 cut(s) 298, 454, 579, 1695, 2620, 2841
TaiI ACGT 4 cut(s) 62, 900, 1582, 1663
TatI WGTACW 3 cut(s) 614, 1392, 2652
TauI GCSGC 3 cut(s) 174, 1066, 2858
TfiI GAWTC 9 cut(s) 491, 502, 1220, 1448, 1788, 2018, 2456, 2540, 2933
Tru1I TTAA 7 cut(s) 557, 1830, 2229, 2348, 2361, 2595, 2715
Tru9I TTAA 7 cut(s) 557, 1830, 2229, 2348, 2361, 2595, 2715
TscAI CASTG 4 cut(s) 693, 1822, 2092, 2457
TseFI GTSAC 4 cut(s) 238, 302, 1196, 2087
TseI GCWGC 8 cut(s) 482, 806, 1319, 1514, 2580, 2633, 2759, 2786
Tsp45I GTSAC 4 cut(s) 238, 302, 1196, 2087
TspDTI ATGAA 6 cut(s) 397, 768, 1142, 1518, 1932, 2781
TspGWI ACGGA 2 cut(s) 842, 887
TspRI CASTG 4 cut(s) 693, 1822, 2092, 2457
Van91I CCANNNNNTGG 2 cut(s) 30, 1418
Vha464I CTTAAG 2 cut(s) 2228, 2594
XapI RAATTY 7 cut(s) 672, 876, 926, 1138, 2154, 2264, 2831
XceI RCATGY 1 cut(s) 1857
XhoI CTCGAG 3 cut(s) 774, 1396, 2442
XmiI GTMKAC 2 cut(s) 627, 951
XmnI GAANNNNTTC 2 cut(s) 1687, 2952
XspI CTAG 8 cut(s) 96, 531, 854, 1244, 1491, 2753, 2811, 2816
ZrmI AGTACT 1 cut(s) 1394
Zsp2I ATGCAT 1 cut(s) 1689
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.