Rw7G008140

Staphylococcal nuclease domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0004359
Physical Location & Seq
Forward (+)
7464651 .. 7469896
5246 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G008140.1

Sequence Viewer

Length: 2979 bp
ATGGCATCGTCAACAGCTGGGACCACGGGATGGCTGAGAGGCAGAGTCAAGGCCGTTACGTCCGGCGATTGCCTGGTCATCATGGCCCTCACCTCGAGCAAGCCCGGACCACCACCTGAGAAAACCATCACTCTCTCATCGCTTATGGCTCCCAAGCTGGCCCGTAGAGGTGGCATTGATGAGCCATTTGCATGGGAGAGCAGAGAGTTCCTGAGGAAGCTCTGCATAGGAAAGGAGGTGACTTTCAAGACCGACTATACTGTATCATCCATAGGTCGGGATTTTGGCTCTGTTTTCCTTGGTGACAAAAATGTTGCCATGCTTGTTGTTTCACAGGGCTGGGCAAAGGTCCGGGAGCAACCTAGTCAACCGAAACAGGGACAACAGAAAATAGAAGCCAGTCCTTTCATTGCAGAACTGCTCCAACTTGAAGAGCAGGCAAAGACCCAGGGCCTTGGTCGCTGGAGCAAGGTTCCAGGTGCTGCTGAGGCATCCATTAGGAATCTACCTCCCTCTGCTATTGGTGATCCTAGCAAATTAGACGCCATGAGTCTGTTAAATACAAACAAGGGCAAGCCAATGGAAGCCATTGTTGAGCAGGTTCGTGATGGCAGTACAATTCGGGTCTACTTGCTTCCCGAGTTTCAGTTCGTCCAAGTATTTGTAGCAGGAATTCAGGCCCCGTCAGTGGGAAAGAGGCCTTTTACAACAGAAATTGTCCCTGAGCCAGAAATTCCTTCAGATAAAACAAATGGAGATATCTCTGCTGAAACTCGAGCCCCTCTTACTTCTGCACAAAGGATTGCAGCTTCAGCAGTATCACCCAATGAAACTGTTCCAGATCCATTTGCACTGGAAGCTAAATACTTTACTGAAATTCGTGTGTTGAATAGAGACGTTCGCATTGTTCTGGAAGGCGTTGACAAATTCAGCAATTTGATTGGGTCAGTATATTACCCTGATGGGGACTCTGCAAAAGATTTGGCTCTGGAGCTTGGTTATGCAAAATATGTTGAATGGAGTGCAAACATGATGGAAGAAGAACCGAAGCGGCGGCTGAAGACCGCAGAACTTCAAGCAAAGAAAACGAAGTTGAGACTTTGGACAAACTATATGCCTCCGGCTACAAATTCAAAGCCAATTCATAACCAGAACTTTACGGGAAAGGTTGTGGAGGTTGTAAGTGGTGACTGTGTTATTGTAGCTGATGATTCTATTCCATATGGCAGTCCCCTAGCAGAGAGGAGAGTAAATCTTTCAAGTATTAGGTGTCCAAAAATGGGTAATCCTCGTAGAGAGGAAAAGCCAGCTCCATACGCCCGTGAAGCAAAGGAGTTCCTTAGAACACGCCTTATTGGACGCCAGGTCAGTGTCCAAATGGAGTACTCGAGAAAGATCAGCCCGGCAGATGGAGCTCCAGTTGCTAACGGACCTACAGATTCCAGGATAATGGATTTTGGATCAGTCTTCCTTTCAGCCCCTACTAAAGCTGAAGGAGACGATGCAGCAACACCTGCTTCATCAGCCAGCCAGCAGGCTGGGGTGAATGTTGCTGAGCTCGTGGTTGCACGTGGCTTTGGCAGTGTTATCAGGCATCGGGATTTTGAGGAGAGATCAAGCTATTATGATGCTCTTCTTTCTGCGGAATCACGTGCTACCGCTGGCAAGAAAGGAATGCATTCTTCCAAGGAACCCCCAGTCATGCACATAACAGACCTGACAACGGCATCGGCTAAGAAAGCCAGAGATTTCTTGCCATTCTTGCATCGAAGTAGGAGAATCCCTGCCGTTGTGGAATATGTGCTCAGTGGTCATCGTTTTAAACTATTGGTTCCCAAGGAAACATGTAGCATTGCTTTCTCGTTCTCTGGTGTTAGATGTCCTGGTCGTGATGAGCCATATTCGGACGAAGCAATTGCACTAATGAGGCGAAGAATAATGCAGAGAGATGTCGAGATTGAAGTGGAGACTGTTGATAGAACTGGAACTTTCTTGGGATCTCTATGGGAATCAAGGACTAACATGGCAATTGCCCTTGTTGAAGCTGGCCTTGCAAAGTATACTTCCTTTGCCGGCAGTGACAGGATCCCAGATGCCCACCTGCTTGAACAAGCTGAGAAAAATGCAAAAAAGCAGAAACTGAAAATTTGGGAGAAATATGTTGAAGGAGAGGAAGTTCCAAATGGTTTACCAACTGACACCAAACAGAAAGAAGTGCTAAAGGTAGTGGTTACAGAAGTTTTGGAGGGCGGTAAATTTTATGTTCAGACAGTTGCGGACCAGAGTATATCTTCTATTCAGCAACAGCTTGCTTCATTGAATCTTCAAGAAGCTCCTTTAATTGGTGCTTTTAATCCAAAGAAGGGTGACATTGTCCTTGCTCAATTTAGTGCAGATAATTCCTGGAACCGGGCAATGATTGTCAATGCTCCTCGAGGACCTGTGGAATCTTCTAAAGACAAGTTTGAAGTGTTCTACATAGATTATGGTAATCAAGAGGTTGTCCCTTACAGTTCGTTACGGCCTCTTGATACTTCTGTTTCCTCGACACCTGGTCTTGCCCAACTTTGCAGCCTTGCATATCTTAAGGTCCCCACCTTGACACAGGACCATGGTGAAGAAGCAGCAGAATTTTTAAGCGAGTACACATTATCCAAAGAGTTTTCAGCCATGATTGAGGAAAGGGATTTCTCAGGAGGCAAAGTTAAAGGCCAGGGAACTGGACCGGTTCTTTTGGTAACTCTTGTTGCTGCTAATGAAGAGATCAGTATAAATGCTGCCATGCTCCAGGAGGGACTTGCTAGGCTAGAGAAAAAGAAGAAATTTGACACCAAGGATCGAAAAGCGGCACTCGACAACTTGGAAAAGTTCCAGGAAGAAGCACAGGTTAATCGACGGGGGAAGTGGCAATATGGACATTATGATTCCGAGGAAGAGGAGATTGTTCCTCCTGTTAAAAAGGGTGTCGGCAAGCGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000932 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003824 GO:0004518 GO:0005488 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005737 GO:0005783 GO:0005829 GO:0005886 GO:0005911 GO:0006082 GO:0006139 GO:0006396 GO:0006397 GO:0006401 GO:0006402 GO:0006629 GO:0006720 GO:0006721 GO:0006725 GO:0006807 GO:0006950 GO:0006970 GO:0007275 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009056 GO:0009057 GO:0009058 GO:0009266 GO:0009408 GO:0009506 GO:0009507 GO:0009536 GO:0009628 GO:0009651 GO:0009685 GO:0009686 GO:0009791 GO:0009845 GO:0009889 GO:0009891 GO:0009892 GO:0009893 GO:0009987 GO:0010035 GO:0010038 GO:0010371 GO:0010372 GO:0010467 GO:0010468 GO:0010494 GO:0010565 GO:0010605 GO:0010629 GO:0010817 GO:0012505 GO:0016020 GO:0016053 GO:0016070 GO:0016071 GO:0016101 GO:0016102 GO:0016114 GO:0016787 GO:0016788 GO:0019216 GO:0019222 GO:0019439 GO:0019747 GO:0019752 GO:0030054 GO:0030312 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031967 GO:0031975 GO:0032350 GO:0032352 GO:0032501 GO:0032502 GO:0032991 GO:0033554 GO:0034605 GO:0034641 GO:0034655 GO:0035770 GO:0036464 GO:0042221 GO:0042445 GO:0042446 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043436 GO:0043455 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044255 GO:0044260 GO:0044265 GO:0044270 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045828 GO:0045834 GO:0046394 GO:0046483 GO:0046686 GO:0046700 GO:0046885 GO:0046886 GO:0046889 GO:0046890 GO:0048518 GO:0048519 GO:0048522 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0055044 GO:0060255 GO:0062012 GO:0062013 GO:0065007 GO:0065008 GO:0071704 GO:0071944 GO:0080090 GO:0090304 GO:0090305 GO:0090351 GO:0097159 GO:1901360 GO:1901361 GO:1901363 GO:1901575 GO:1901576 GO:1990904
KEGG Pathways
Metabolic & Signaling
ko05169 ko05203 map05169 map05203
Pfam Domains
Protein Families
SNase TUDOR

Protein Analysis

992

Amino Acids

109.14

Weight (kDa)

8.14

Isoelectric Point (pI)

46.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SNase PF00565 42 - 157 1.4e-09 Staphylococcal nuclease homologue
SNase PF00565 279 - 369 1e-09 Staphylococcal nuclease homologue
SNase PF00565 621 - 718 2.3e-15 Staphylococcal nuclease homologue
TUDOR PF00567 737 - 860 1.9e-21 Tudor domain
SNase PF00565 866 - 970 1.3e-06 Staphylococcal nuclease homologue
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 1522, 2109
AbsI CCTCGAGG 1 cut(s) 2433
Acc36I ACCTGC 3 cut(s) 589, 1522, 2109
AccB7I CCANNNNNTGG 1 cut(s) 30
AccI GTMKAC 2 cut(s) 627, 2060
AciI CCGC 8 cut(s) 1051, 1054, 1065, 1643, 1659, 2250, 2276, 2846
AclWI GGATC 7 cut(s) 521, 836, 1468, 2005, 2080, 2093, 2844
AcsI RAATTY 9 cut(s) 672, 732, 876, 926, 1129, 2145, 2255, 2630, 2822
AcuI CTGAAG 4 cut(s) 723, 795, 1079, 1512
AcvI CACGTG 2 cut(s) 1571, 1652
AcyI GRCGYC 2 cut(s) 543, 1360
AfaI GTAC 3 cut(s) 616, 1385, 2645
AflII CTTAAG 1 cut(s) 2585
AflIII ACRYGT 1 cut(s) 1844
AgeI ACCGGT 1 cut(s) 2725
AhdI GACNNNNNGTC 2 cut(s) 1364, 2553
AloI GAACNNNNNNTCC 2 cut(s) 2160, 2192
Alw21I GWGCWC 3 cut(s) 1417, 1560, 1806
Alw26I GTCTC 4 cut(s) 888, 1090, 1491, 1961
AlwI GGATC 7 cut(s) 521, 836, 1468, 2005, 2080, 2093, 2844
AlwNI CAGNNNCTG 2 cut(s) 482, 2140
Ama87I CYCGRG 5 cut(s) 94, 638, 774, 1387, 2433
AoxI GGCC 9 cut(s) 51, 84, 159, 451, 678, 698, 2047, 2522, 2710
ApeKI GCWGC 7 cut(s) 482, 806, 1505, 2571, 2624, 2750, 2777
ApoI RAATTY 9 cut(s) 672, 732, 876, 926, 1129, 2145, 2255, 2630, 2822
AsiGI ACCGGT 1 cut(s) 2725
Asp700I GAANNNNTTC 2 cut(s) 834, 1678
AsuC2I CCSGG 4 cut(s) 105, 353, 1403, 2411
AsuHPI GGTGA 9 cut(s) 82, 250, 314, 536, 813, 1199, 1555, 2378, 2627
AvaI CYCGRG 5 cut(s) 94, 638, 774, 1387, 2433
AvaII GGWCC 9 cut(s) 21, 107, 349, 1430, 2278, 2438, 2590, 2608, 2723
AxyI CCTNAGG 1 cut(s) 212
BaeI ACNNNNGTAYC 2 cut(s) 2523, 2556
BamHI GGATCC 1 cut(s) 2085
BanII GRGCYC 3 cut(s) 781, 1417, 1560
BauI CACGAG 1 cut(s) 1559
BbrPI CACGTG 2 cut(s) 1571, 1652
BbsI GAAGAC 2 cut(s) 1067, 1459
Bbv12I GWGCWC 3 cut(s) 1417, 1560, 1806
BbvCI CCTCAGC 1 cut(s) 486
BbvI GCAGC 7 cut(s) 469, 818, 1517, 2583, 2636, 2737, 2764
BccI CCATC 6 cut(s) 24, 134, 602, 956, 1027, 1403
BceAI ACGGC 4 cut(s) 38, 1740, 1772, 2537
BcgI CGANNNNNNTGC 2 cut(s) 1898, 1932
BcnI CCSGG 4 cut(s) 105, 353, 1403, 2411
BcoDI GTCTC 4 cut(s) 888, 1090, 1491, 1961
BfaI CTAG 5 cut(s) 363, 531, 1235, 2802, 2807
BfmI CTRYAG 1 cut(s) 1434
BfrI CTTAAG 1 cut(s) 2585
BfuAI ACCTGC 3 cut(s) 589, 1522, 2109
BlpI GCTNAGC 1 cut(s) 1554
BmcAI AGTACT 1 cut(s) 1385
Bme18I GGWCC 9 cut(s) 21, 107, 349, 1430, 2278, 2438, 2590, 2608, 2723
BmeRI GACNNNNNGTC 2 cut(s) 1364, 2553
BmeT110I CYCGRG 5 cut(s) 94, 638, 774, 1387, 2433
BmiI GGNNCC 9 cut(s) 22, 150, 474, 681, 1692, 1833, 2087, 2408, 2592
BmrI ACTGGG 1 cut(s) 1691
BmsI GCATC 8 cut(s) 14, 500, 1492, 1603, 1618, 1736, 1774, 2083
BmuI ACTGGG 1 cut(s) 1691
BpiI GAAGAC 2 cut(s) 1067, 1459
BpmI CTGGAG 4 cut(s) 484, 1010, 1401, 2771
Bpu10I CCTNAGC 2 cut(s) 486, 723
Bpu1102I GCTNAGC 1 cut(s) 1554
BpuMI CCSGG 4 cut(s) 105, 353, 1403, 2411
BsaAI YACGTR 2 cut(s) 1571, 1652
BsaHI GRCGYC 2 cut(s) 543, 1360
BsaWI WCCGGW 1 cut(s) 2725
BsaXI ACNNNNNCTCC 6 cut(s) 1404, 1434, 2160, 2190, 2688, 2718
Bse118I RCCGGY 2 cut(s) 2072, 2725
Bse1I ACTGG 6 cut(s) 399, 858, 1418, 1697, 1987, 2725
Bse21I CCTNAGG 1 cut(s) 212
Bse3DI GCAATG 3 cut(s) 408, 1851, 2421
BseGI GGATG 3 cut(s) 35, 266, 491
BseMI GCAATG 3 cut(s) 408, 1851, 2421
BseMII CTCAG 9 cut(s) 26, 108, 203, 477, 714, 1545, 1819, 2106, 2706
BseNI ACTGG 6 cut(s) 399, 858, 1418, 1697, 1987, 2725
BseRI GAGGAG 4 cut(s) 1258, 1622, 2421, 2951
BseXI GCAGC 7 cut(s) 469, 818, 1517, 2583, 2636, 2737, 2764
BseYI CCCAGC 3 cut(s) 17, 339, 1538
BsgI GTGCAG 2 cut(s) 777, 2412
BshFI GGCC 9 cut(s) 53, 86, 161, 453, 680, 700, 2049, 2524, 2712
BshTI ACCGGT 1 cut(s) 2725
BsiHKAI GWGCWC 3 cut(s) 1417, 1560, 1806
BsiHKCI CYCGRG 5 cut(s) 94, 638, 774, 1387, 2433
BsiSI CCGG 8 cut(s) 63, 105, 352, 1121, 1403, 2073, 2410, 2726
BslFI GGGAC 8 cut(s) 34, 393, 704, 980, 1215, 2489, 2576, 2808
BsmAI GTCTC 4 cut(s) 888, 1090, 1491, 1961
BsmBI CGTCTC 2 cut(s) 888, 1491
BsmFI GGGAC 8 cut(s) 34, 393, 704, 980, 1215, 2489, 2576, 2808
BsmI GAATGC 2 cut(s) 1678, 1680
BsnI GGCC 9 cut(s) 53, 86, 161, 453, 680, 700, 2049, 2524, 2712
BsoBI CYCGRG 5 cut(s) 94, 638, 774, 1387, 2433
Bsp1286I GDGCHC 4 cut(s) 781, 1417, 1560, 1806
Bsp143I GATC 9 cut(s) 526, 841, 1395, 1460, 1613, 1997, 2085, 2763, 2836
Bsp1720I GCTNAGC 1 cut(s) 1554
Bsp19I CCATGG 1 cut(s) 2611
BspACI CCGC 8 cut(s) 1051, 1054, 1065, 1643, 1659, 2250, 2276, 2846
BspANI GGCC 9 cut(s) 53, 86, 161, 453, 680, 700, 2049, 2524, 2712
BspCNI CTCAG 9 cut(s) 27, 109, 204, 478, 715, 1546, 1818, 2107, 2705
BspLI GGNNCC 9 cut(s) 22, 150, 474, 681, 1692, 1833, 2087, 2408, 2592
BspMI ACCTGC 3 cut(s) 589, 1522, 2109
BspPI GGATC 7 cut(s) 521, 836, 1468, 2005, 2080, 2093, 2844
BspQI GCTCTTC 2 cut(s) 426, 1638
BspTI CTTAAG 1 cut(s) 2585
BsrDI GCAATG 3 cut(s) 408, 1851, 2421
BsrFI RCCGGY 2 cut(s) 2072, 2725
BsrI ACTGG 6 cut(s) 399, 858, 1418, 1697, 1987, 2725
BssAI RCCGGY 2 cut(s) 2072, 2725
BssMI GATC 9 cut(s) 526, 841, 1395, 1460, 1613, 1997, 2085, 2763, 2836
BssNAI GTATAC 1 cut(s) 2061
BssNI GRCGYC 2 cut(s) 543, 1360
BssSI CACGAG 1 cut(s) 1559
BssT1I CCWWGG 6 cut(s) 298, 454, 1686, 1836, 2611, 2832
Bst1107I GTATAC 1 cut(s) 2061
Bst2BI CACGAG 1 cut(s) 1559
Bst4CI ACNGT 6 cut(s) 262, 835, 1193, 1972, 2272, 2513
Bst6I CTCTTC 4 cut(s) 426, 1638, 2754, 2928
BstACI GRCGYC 2 cut(s) 543, 1360
BstAFI CTTAAG 1 cut(s) 2585
BstAPI GCANNNNNTGC 1 cut(s) 1514
BstBAI YACGTR 2 cut(s) 1571, 1652
BstDSI CCRYGG 2 cut(s) 24, 2611
BstF5I GGATG 3 cut(s) 35, 266, 491
BstKTI GATC 9 cut(s) 529, 844, 1398, 1463, 1616, 2000, 2088, 2766, 2839
BstMAI GTCTC 4 cut(s) 888, 1090, 1491, 1961
BstMBI GATC 9 cut(s) 526, 841, 1395, 1460, 1613, 1997, 2085, 2763, 2836
BstNSI RCATGY 1 cut(s) 1848
BstSFI CTRYAG 1 cut(s) 1434
BstV1I GCAGC 7 cut(s) 469, 818, 1517, 2583, 2636, 2737, 2764
BstV2I GAAGAC 2 cut(s) 1067, 1459
BstX2I RGATCY 3 cut(s) 841, 1997, 2085
BstXI CCANNNNNNTGG 5 cut(s) 192, 455, 1450, 1538, 2720
BstYI RGATCY 3 cut(s) 841, 1997, 2085
BstZ17I GTATAC 1 cut(s) 2061
Bsu36I CCTNAGG 1 cut(s) 212
BsuRI GGCC 9 cut(s) 53, 86, 161, 453, 680, 700, 2049, 2524, 2712
BtgI CCRYGG 2 cut(s) 24, 2611
BtgZI GCGATG 1 cut(s) 123
BtsCI GGATG 3 cut(s) 35, 266, 491
BtsI GCAGTG 2 cut(s) 1588, 2083
BtsIMutI CAGTG 6 cut(s) 693, 851, 1375, 1588, 1813, 2083
BveI ACCTGC 3 cut(s) 589, 1522, 2109
CaiI CAGNNNCTG 2 cut(s) 482, 2140
Cfr10I RCCGGY 2 cut(s) 2072, 2725
CseI GACGC 2 cut(s) 551, 1368
CsiI ACCWGGT 1 cut(s) 2551
Csp6I GTAC 3 cut(s) 615, 1384, 2644
CspAI ACCGGT 1 cut(s) 2725
CviQI GTAC 3 cut(s) 615, 1384, 2644
DpnI GATC 9 cut(s) 528, 843, 1397, 1462, 1615, 1999, 2087, 2765, 2838
DpnII GATC 9 cut(s) 526, 841, 1395, 1460, 1613, 1997, 2085, 2763, 2836
DraI TTTAAA 1 cut(s) 1822
DriI GACNNNNNGTC 2 cut(s) 1364, 2553
Eam1104I CTCTTC 4 cut(s) 426, 1638, 2754, 2928
Eam1105I GACNNNNNGTC 2 cut(s) 1364, 2553
EarI CTCTTC 4 cut(s) 426, 1638, 2754, 2928
Ecl136II GAGCTC 2 cut(s) 1415, 1558
Eco130I CCWWGG 6 cut(s) 298, 454, 1686, 1836, 2611, 2832
Eco147I AGGCCT 1 cut(s) 700
Eco24I GRGCYC 3 cut(s) 781, 1417, 1560
Eco32I GATATC 1 cut(s) 760
Eco47I GGWCC 9 cut(s) 21, 107, 349, 1430, 2278, 2438, 2590, 2608, 2723
Eco53kI GAGCTC 2 cut(s) 1415, 1558
Eco57I CTGAAG 4 cut(s) 723, 795, 1079, 1512
Eco72I CACGTG 2 cut(s) 1571, 1652
Eco81I CCTNAGG 1 cut(s) 212
Eco88I CYCGRG 5 cut(s) 94, 638, 774, 1387, 2433
EcoICRI GAGCTC 2 cut(s) 1415, 1558
EcoO109I RGGNCCY 4 cut(s) 451, 679, 2438, 2590
EcoRI GAATTC 1 cut(s) 672
EcoRV GATATC 1 cut(s) 760
EcoT14I CCWWGG 6 cut(s) 298, 454, 1686, 1836, 2611, 2832
EcoT22I ATGCAT 1 cut(s) 1680
EcoT38I GRGCYC 3 cut(s) 781, 1417, 1560
ErhI CCWWGG 6 cut(s) 298, 454, 1686, 1836, 2611, 2832
Esp3I CGTCTC 2 cut(s) 888, 1491
FalI AAGNNNNNCTT 2 cut(s) 2034, 2066
FaqI GGGAC 8 cut(s) 34, 393, 704, 980, 1215, 2489, 2576, 2808
FauNDI CATATG 1 cut(s) 1222
FblI GTMKAC 2 cut(s) 627, 2060
FokI GGATG 3 cut(s) 42, 253, 478
FriOI GRGCYC 3 cut(s) 781, 1417, 1560
FspBI CTAG 5 cut(s) 363, 531, 1235, 2802, 2807
GsaI CCCAGC 3 cut(s) 21, 343, 1542
GsuI CTGGAG 4 cut(s) 484, 1010, 1401, 2771
HaeIII GGCC 9 cut(s) 53, 86, 161, 453, 680, 700, 2049, 2524, 2712
HapII CCGG 8 cut(s) 63, 105, 352, 1121, 1403, 2073, 2410, 2726
HgaI GACGC 2 cut(s) 551, 1368
Hin1I GRCGYC 2 cut(s) 543, 1360
HincII GTYRAC 3 cut(s) 12, 368, 922
HindII GTYRAC 3 cut(s) 12, 368, 922
HpaII CCGG 8 cut(s) 63, 105, 352, 1121, 1403, 2073, 2410, 2726
HphI GGTGA 9 cut(s) 82, 250, 314, 536, 813, 1199, 1555, 2378, 2627
Hpy166II GTNNAC 7 cut(s) 12, 368, 628, 922, 2061, 2189, 2646
Hpy188I TCNGA 4 cut(s) 742, 1906, 2268, 2929
Hpy8I GTNNAC 7 cut(s) 12, 368, 628, 922, 2061, 2189, 2646
Hpy99I CGWCG 1 cut(s) 2898
HpyAV CCTTC 5 cut(s) 747, 908, 1487, 2159, 2356
HpyCH4III ACNGT 6 cut(s) 262, 835, 1193, 1972, 2272, 2513
HpyCH4IV ACGT 4 cut(s) 59, 897, 1570, 1651
HpySE526I ACGT 4 cut(s) 59, 897, 1570, 1651
Hsp92I GRCGYC 2 cut(s) 543, 1360
KroI GCCGGC 1 cut(s) 2072
KroNI GCCGGC 1 cut(s) 2074
Kzo9I GATC 9 cut(s) 526, 841, 1395, 1460, 1613, 1997, 2085, 2763, 2836
LguI GCTCTTC 2 cut(s) 426, 1638
Lsp1109I GCAGC 7 cut(s) 469, 818, 1517, 2583, 2636, 2737, 2764
LweI GCATC 8 cut(s) 14, 500, 1492, 1603, 1618, 1736, 1774, 2083
MabI ACCWGGT 1 cut(s) 2551
MaeI CTAG 5 cut(s) 363, 531, 1235, 2802, 2807
MaeII ACGT 4 cut(s) 59, 897, 1570, 1651
MaeIII GTNAC 9 cut(s) 55, 238, 302, 1187, 2078, 2230, 2366, 2517, 2737
MalI GATC 9 cut(s) 528, 843, 1397, 1462, 1615, 1999, 2087, 2765, 2838
MboI GATC 9 cut(s) 526, 841, 1395, 1460, 1613, 1997, 2085, 2763, 2836
MfeI CAATTG 2 cut(s) 1914, 2028
MflI RGATCY 3 cut(s) 841, 1997, 2085
MhlI GDGCHC 4 cut(s) 781, 1417, 1560, 1806
MlyI GAGTC 3 cut(s) 54, 559, 962
MmeI TCCRAC 1 cut(s) 448
Mph1103I ATGCAT 1 cut(s) 1680
MroNI GCCGGC 1 cut(s) 2072
MroXI GAANNNNTTC 2 cut(s) 834, 1678
MseI TTAA 9 cut(s) 557, 1821, 2339, 2352, 2586, 2636, 2706, 2889, 2955
MslI CAYNNNNRTG 1 cut(s) 190
MspA1I CMGCKG 2 cut(s) 17, 1661
MspCI CTTAAG 1 cut(s) 2585
MspI CCGG 8 cut(s) 63, 105, 352, 1121, 1403, 2073, 2410, 2726
MunI CAATTG 2 cut(s) 1914, 2028
Mva1269I GAATGC 2 cut(s) 1678, 1680
NaeI GCCGGC 1 cut(s) 2074
NciI CCSGG 4 cut(s) 105, 353, 1403, 2411
NcoI CCATGG 1 cut(s) 2611
NdeI CATATG 1 cut(s) 1222
NdeII GATC 9 cut(s) 526, 841, 1395, 1460, 1613, 1997, 2085, 2763, 2836
NgoMIV GCCGGC 1 cut(s) 2072
NlaIV GGNNCC 9 cut(s) 22, 150, 474, 681, 1692, 1833, 2087, 2408, 2592
NmuCI GTSAC 5 cut(s) 238, 302, 1187, 2078, 2366
NsiI ATGCAT 1 cut(s) 1680
NspI RCATGY 1 cut(s) 1848
PaeR7I CTCGAG 4 cut(s) 94, 774, 1387, 2433
PaqCI CACCTGC 2 cut(s) 1522, 2109
PasI CCCWGGG 1 cut(s) 448
PceI AGGCCT 1 cut(s) 700
PciI ACATGT 1 cut(s) 1844
PciSI GCTCTTC 2 cut(s) 426, 1638
PctI GAATGC 2 cut(s) 1678, 1680
PdiI GCCGGC 1 cut(s) 2074
PdmI GAANNNNTTC 2 cut(s) 834, 1678
PfeI GAWTC 9 cut(s) 502, 1211, 1439, 1646, 1779, 2009, 2320, 2447, 2924
PflFI GACNNNGTC 1 cut(s) 2372
PflMI CCANNNNNTGG 1 cut(s) 30
PfoI TCCNGGA 5 cut(s) 351, 1442, 2402, 2787, 2871
PinAI ACCGGT 1 cut(s) 2725
PleI GAGTC 3 cut(s) 53, 558, 962
PmaCI CACGTG 2 cut(s) 1571, 1652
PmlI CACGTG 2 cut(s) 1571, 1652
PpsI GAGTC 3 cut(s) 53, 558, 962
Ppu21I YACGTR 2 cut(s) 1571, 1652
PpuMI RGGWCCY 2 cut(s) 2438, 2590
PscI ACATGT 1 cut(s) 1844
Psp124BI GAGCTC 2 cut(s) 1417, 1560
Psp5II RGGWCCY 2 cut(s) 2438, 2590
PspCI CACGTG 2 cut(s) 1571, 1652
PspFI CCCAGC 3 cut(s) 17, 339, 1538
PspN4I GGNNCC 9 cut(s) 22, 150, 474, 681, 1692, 1833, 2087, 2408, 2592
PspPPI RGGWCCY 2 cut(s) 2438, 2590
PspXI VCTCGAGB 3 cut(s) 94, 774, 2433
PstNI CAGNNNCTG 2 cut(s) 482, 2140
PsuI RGATCY 3 cut(s) 841, 1997, 2085
PsyI GACNNNGTC 1 cut(s) 2372
PvuII CAGCTG 1 cut(s) 17
RsaI GTAC 3 cut(s) 616, 1385, 2645
RsaNI GTAC 3 cut(s) 615, 1384, 2644
RseI CAYNNNNRTG 1 cut(s) 190
SacI GAGCTC 2 cut(s) 1417, 1560
SapI GCTCTTC 2 cut(s) 426, 1638
SaqAI TTAA 9 cut(s) 557, 1821, 2339, 2352, 2586, 2636, 2706, 2889, 2955
Sau3AI GATC 9 cut(s) 526, 841, 1395, 1460, 1613, 1997, 2085, 2763, 2836
ScaI AGTACT 1 cut(s) 1385
SchI GAGTC 3 cut(s) 54, 559, 962
SduI GDGCHC 4 cut(s) 781, 1417, 1560, 1806
SexAI ACCWGGT 1 cut(s) 2551
SfaNI GCATC 8 cut(s) 14, 500, 1492, 1603, 1618, 1736, 1774, 2083
SfcI CTRYAG 1 cut(s) 1434
Sfr274I CTCGAG 4 cut(s) 94, 774, 1387, 2433
SinI GGWCC 9 cut(s) 21, 107, 349, 1430, 2278, 2438, 2590, 2608, 2723
SlaI CTCGAG 4 cut(s) 94, 774, 1387, 2433
SmiMI CAYNNNNRTG 1 cut(s) 190
SmlI CTYRAG 5 cut(s) 94, 774, 1387, 2433, 2585
SmoI CTYRAG 5 cut(s) 94, 774, 1387, 2433, 2585
SseBI AGGCCT 1 cut(s) 700
SsiI CCGC 8 cut(s) 1051, 1054, 1065, 1643, 1659, 2250, 2276, 2846
SspMI CTAG 5 cut(s) 363, 531, 1235, 2802, 2807
SstI GAGCTC 2 cut(s) 1417, 1560
StuI AGGCCT 1 cut(s) 700
StyI CCWWGG 6 cut(s) 298, 454, 1686, 1836, 2611, 2832
TaaI ACNGT 6 cut(s) 262, 835, 1193, 1972, 2272, 2513
TaiI ACGT 4 cut(s) 62, 900, 1573, 1654
TaqII GACCGA 1 cut(s) 266
TatI WGTACW 3 cut(s) 614, 1383, 2643
TauI GCSGC 3 cut(s) 1054, 1057, 2849
TfiI GAWTC 9 cut(s) 502, 1211, 1439, 1646, 1779, 2009, 2320, 2447, 2924
Tru1I TTAA 9 cut(s) 557, 1821, 2339, 2352, 2586, 2636, 2706, 2889, 2955
Tru9I TTAA 9 cut(s) 557, 1821, 2339, 2352, 2586, 2636, 2706, 2889, 2955
TscAI CASTG 6 cut(s) 693, 858, 1375, 1588, 1813, 2083
TseFI GTSAC 5 cut(s) 238, 302, 1187, 2078, 2366
TseI GCWGC 7 cut(s) 482, 806, 1505, 2571, 2624, 2750, 2777
Tsp45I GTSAC 5 cut(s) 238, 302, 1187, 2078, 2366
TspDTI ATGAA 6 cut(s) 397, 843, 1133, 1509, 2304, 2772
TspGWI ACGGA 1 cut(s) 1443
TspRI CASTG 6 cut(s) 693, 858, 1375, 1588, 1813, 2083
Tth111I GACNNNGTC 1 cut(s) 2372
Van91I CCANNNNNTGG 1 cut(s) 30
Vha464I CTTAAG 1 cut(s) 2585
VpaK11BI GGWCC 9 cut(s) 21, 107, 349, 1430, 2278, 2438, 2590, 2608, 2723
XapI RAATTY 9 cut(s) 672, 732, 876, 926, 1129, 2145, 2255, 2630, 2822
XceI RCATGY 1 cut(s) 1848
XhoI CTCGAG 4 cut(s) 94, 774, 1387, 2433
XmiI GTMKAC 2 cut(s) 627, 2060
XmnI GAANNNNTTC 2 cut(s) 834, 1678
XspI CTAG 5 cut(s) 363, 531, 1235, 2802, 2807
ZrmI AGTACT 1 cut(s) 1385
Zsp2I ATGCAT 1 cut(s) 1680
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.