Rh7DG096300

Staphylococcal nuclease domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
OG0004359
Physical Location & Seq
Forward (+)
8083454 .. 8088703
5250 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG096300.1

Sequence Viewer

Length: 2988 bp
ATGGCATCGTCAACAGCTGGGACCACGGGATGGCTGAGAGGCAGAGTCAAGGCCGTTACGTCCGGCGATTGCCTGGTCATCATGGCCCTCACCTCGAGCAAGCCCGGACCACCACCTGAGAAAACCATCACTCTCTCATCGCTTATGGCTCCCAAGCTGGCCCGTAGAGGTGGCGTTGATGAGCCATTTGCATGGGAGAGCAGAGAGTTCCTGAGGAAGCTCTGCATAGGAAAGGAGGTGACTTTCAAGACCGACTATACTGTATCATCCATAGGTCGGGATTTTGGCTCTGTTTTCCTTGGTGACAAAAATGTTGCCATGCTTGTTGTTTCACAGGGCTGGGCAAAGGTCCGGGAGCAACCTAGTCAACCGAAACAGGGACAACAGAAAGTAGAAGCCAGTCCTTTCATTGCAGAACTGCTCCAACTTGAAGAGCAGGCAAAGACCCAGGGCCTTGGTCGCTGGAGCAAGGTTCCAGGTGCTGCTGAGGCATCCGTTAGGAATCTACCTCCCTCTGCTATTGGTGATCCTAGCAAATTAGATGCCATGAGTCTGTTAAATACAAACAAGGGCAAGCCAATGGAAGCCATTGTTGAGCAGGTTCGTGATGGCAGTACAATTCGGGTCTACTTGCTTCCCGAGTTTCAGTTCGTCCAAGTATTTGTAGCAGGAATTCAGGCCCCGTCAGTGGGAAAGAGGCCTTTTACAACAGAAATTGTCCCTGAGCCAGAAATTCCTTCAGATAAAACAAATGGAGATATCTCTGCTGAAACTCGAGCCCCTCTTACTTCTGCACAAAGGATTGCAGCTTCAGCAGTATCACCCAATGAAACTGTTCCGGATCCATTTGCACTGGAAGCTAAATACTTTACTGAAATTCGTGTGTTGAATAGAGACGTTCGCATTGTTCTGGAAGGCGTTGACAAATTCAGCAATTTGATTGGTTCAGTATATTACCCTGATGGGGACTCTGCAAAAGATTTGGCTCTGGAGCTTGTAGAACATGGTTATGCAAAATATGTTGAATGGAGTGCAAACATGATGGAAGAAGAACCGAAGCGGCGGCTGAAGACTGCAGAACTTCAAGCAAAGAAAACGAAGTTGAGGCTTTGGACAAACTATATGCCTCCGGCTACAAATTCAAAGCCAATTCATAACCAGAACTTTACGGGAAAGGTTGTGGAGGTTGTAAGTGGTGACTGTGTTATTGTAGCTGATGATTCTATTCCATATGGCAGTCCCCTAGCAGAGAGGAGAGTAAATCTTTCAAGTATTAGGTGTCCAAAAATGGGTAATCCTCGTAGAGAGGAAAAACCAGCTCCATACGCCCGTGAAGCAAAGGAGTTCCTTAGAACACGCCTTATTGGACGCCAGGTCAGTGTCCAAATGGAGTACTCGAGAAAGATCAGCCCGGCAGATGGAGCTGCAGTTGCTAATGGACCTACAGATTCCAGGATAATGGATTTTGGATCAGTCTTCCTTTCAGCCCCTACTAAAGCTGAAGGAGACGATGCAGCAACACCTGCTTCATCAGCCAGCCAGCAGGCAGGGGTGAATGTTGCTGAACTCGTGGTTGCACGTGGCTTTGGCAGTGTTATCAGGCATCGGGATTTTGAGGAGAGATCAAGCTATTATGATGCTCTTCTTTCTGCGGAATCACGTGCTACCGCTGGCAAGAAAGGAATGCATTCTTCCAAGGAACCCCCAGTCATGCACATAACAGACCTGACAACGGCATCGGCTAAGAAAGCCCGAGATTTCTTGCCATTCTTGCATCGAAGTAGGAGAATCCCTGCCGTTGTGGAATATGTGCTCAGTGGTCATCGTTTTAAACTATTGGTTCCCAAGGAAACATGTAGCATTGCTTTCTCGTTCTCTGGTGTTAGATGTCCTGGTCGTGATGAGCCATATTCGGACGAAGCAATTGCACTAATGAGGCGAAGAATAATGCAGAGAGATGTCGAGATTGAAGTGGAGACTGTTGATAGAACTGGAACTTTCTTGGGATCTCTATGGGAATCAAGGACTAACATGGCAATTGCCCTTGTTGAAGCTGGCCTTGCAAAGTATACTTCCTTTGCCGGCAGTGACAGGATCCCAGATGCCCACCTGCTTGAACAAGCTGAGAAAAATGCAAAAAAGCAGAAACTGAAAATTTGGGAGAAATATGTTGAAGGAGAGGAAGTTCCAAATGGTTTACCAACTGACACCAAACAGAAAGAAGTGCTAAAGGTAGTGGTTACAGAAGTTTTGGAGGGCGGTAAATTTTATGTTCAGACAGTTGCGGACCAGAGTATATCTTCTATTCAGCAACAGCTTGCTTCATTGAATCTTCAAGAAGCTCCTTTAATTGGTGCTTTTAATCCAAAGAAGGGTGACATTGTCCTTGCTCAATTTAGTGCAGATAATTCCTGGAACCGGGCAATGATTGTCAATGCTCCTCGAGGACCTGTGGAATCTTCTAAAGACAAGTTTGAAGTGTTCTACATAGATTATGGTAATCAAGAGGTTGTCCCTTACAGTTCGTTACGGCCTCTTGATACTTCTGTTTCCTCGACACCTGGTCTTGCCCAACTTTGCAGCCTTGCATATCTTAAGGTCCCCACCTTGACACAGGACCATGGTGAAGAAGCAGCAGAATTTTTAAGTGAGTACACATTATCCAAAGAGTTTTCAGCCATGATTGAGGAAAGGGATTTCTCAGGAGGCAAAGTTAAAGGCCAGGGAACTGGACCGGTTCTTTTGGTAACTCTTGTTGCTGCTAATGAAGAGATCAGTATAAATGCTGCCATGCTCCAGGAGGGACTTGCTAGGCTAGAGAAAAAGAAGAAATTTGACACCAAGGATCGAAAAGCGGCACTCGACAACTTGGAAAAGTTCCAGGAAGAAGCACAGGTTAATCGACGGGGGAAGTGGCAATATGGACATTATGATTCCGAGGAAGAGGAGATTGTTCCTCCTGTTAAAAAGGGTGTCGGCAAGCGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000932 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003824 GO:0004518 GO:0005488 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005737 GO:0005783 GO:0005829 GO:0005886 GO:0005911 GO:0006082 GO:0006139 GO:0006396 GO:0006397 GO:0006401 GO:0006402 GO:0006629 GO:0006720 GO:0006721 GO:0006725 GO:0006807 GO:0006950 GO:0006970 GO:0007275 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009056 GO:0009057 GO:0009058 GO:0009266 GO:0009408 GO:0009506 GO:0009507 GO:0009536 GO:0009628 GO:0009651 GO:0009685 GO:0009686 GO:0009791 GO:0009845 GO:0009889 GO:0009891 GO:0009892 GO:0009893 GO:0009987 GO:0010035 GO:0010038 GO:0010371 GO:0010372 GO:0010467 GO:0010468 GO:0010494 GO:0010565 GO:0010605 GO:0010629 GO:0010817 GO:0012505 GO:0016020 GO:0016053 GO:0016070 GO:0016071 GO:0016101 GO:0016102 GO:0016114 GO:0016787 GO:0016788 GO:0019216 GO:0019222 GO:0019439 GO:0019747 GO:0019752 GO:0030054 GO:0030312 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031967 GO:0031975 GO:0032350 GO:0032352 GO:0032501 GO:0032502 GO:0032991 GO:0033554 GO:0034605 GO:0034641 GO:0034655 GO:0035770 GO:0036464 GO:0042221 GO:0042445 GO:0042446 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043436 GO:0043455 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044255 GO:0044260 GO:0044265 GO:0044270 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045828 GO:0045834 GO:0046394 GO:0046483 GO:0046686 GO:0046700 GO:0046885 GO:0046886 GO:0046889 GO:0046890 GO:0048518 GO:0048519 GO:0048522 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0055044 GO:0060255 GO:0062012 GO:0062013 GO:0065007 GO:0065008 GO:0071704 GO:0071944 GO:0080090 GO:0090304 GO:0090305 GO:0090351 GO:0097159 GO:1901360 GO:1901361 GO:1901363 GO:1901575 GO:1901576 GO:1990904
KEGG Pathways
Metabolic & Signaling
ko05169 ko05203 map05169 map05203
Pfam Domains
Protein Families
SNase TUDOR

Protein Analysis

995

Amino Acids

109.44

Weight (kDa)

7.9

Isoelectric Point (pI)

44.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SNase PF00565 42 - 157 1.2e-09 Staphylococcal nuclease homologue
SNase PF00565 279 - 372 5e-13 Staphylococcal nuclease homologue
SNase PF00565 624 - 721 2.3e-15 Staphylococcal nuclease homologue
TUDOR PF00567 740 - 863 1.9e-21 Tudor domain
SNase PF00565 869 - 973 1.3e-06 Staphylococcal nuclease homologue
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 1531, 2118
AbsI CCTCGAGG 1 cut(s) 2442
Acc36I ACCTGC 3 cut(s) 589, 1531, 2118
AccB7I CCANNNNNTGG 1 cut(s) 30
AccI GTMKAC 2 cut(s) 627, 2069
AccIII TCCGGA 1 cut(s) 838
AciI CCGC 7 cut(s) 1060, 1063, 1652, 1668, 2259, 2285, 2855
AclWI GGATC 8 cut(s) 521, 836, 849, 1477, 2014, 2089, 2102, 2853
AcsI RAATTY 9 cut(s) 672, 732, 876, 926, 1138, 2154, 2264, 2639, 2831
AcuI CTGAAG 4 cut(s) 723, 795, 1088, 1521
AcvI CACGTG 2 cut(s) 1580, 1661
AcyI GRCGYC 1 cut(s) 1369
AfaI GTAC 3 cut(s) 616, 1394, 2654
AflII CTTAAG 1 cut(s) 2594
AflIII ACRYGT 1 cut(s) 1853
AgeI ACCGGT 1 cut(s) 2734
AhdI GACNNNNNGTC 2 cut(s) 1373, 2562
AloI GAACNNNNNNTCC 2 cut(s) 2169, 2201
Alw21I GWGCWC 1 cut(s) 1815
Alw26I GTCTC 3 cut(s) 888, 1500, 1970
AlwI GGATC 8 cut(s) 521, 836, 849, 1477, 2014, 2089, 2102, 2853
AlwNI CAGNNNCTG 2 cut(s) 482, 2149
Ama87I CYCGRG 6 cut(s) 94, 638, 774, 1396, 1752, 2442
Aor13HI TCCGGA 1 cut(s) 838
AoxI GGCC 9 cut(s) 51, 84, 159, 451, 678, 698, 2056, 2531, 2719
ApeKI GCWGC 8 cut(s) 482, 806, 1424, 1514, 2580, 2633, 2759, 2786
ApoI RAATTY 9 cut(s) 672, 732, 876, 926, 1138, 2154, 2264, 2639, 2831
AsiGI ACCGGT 1 cut(s) 2734
Asp700I GAANNNNTTC 2 cut(s) 834, 1687
AsuC2I CCSGG 4 cut(s) 105, 353, 1412, 2420
AsuHPI GGTGA 9 cut(s) 82, 250, 314, 536, 813, 1208, 1564, 2387, 2636
AvaI CYCGRG 6 cut(s) 94, 638, 774, 1396, 1752, 2442
AvaII GGWCC 9 cut(s) 21, 107, 349, 1439, 2287, 2447, 2599, 2617, 2732
AxyI CCTNAGG 1 cut(s) 212
BaeI ACNNNNGTAYC 2 cut(s) 2532, 2565
BamHI GGATCC 2 cut(s) 841, 2094
BanII GRGCYC 1 cut(s) 781
BauI CACGAG 1 cut(s) 1568
BbrPI CACGTG 2 cut(s) 1580, 1661
BbsI GAAGAC 2 cut(s) 1076, 1468
Bbv12I GWGCWC 1 cut(s) 1815
BbvCI CCTCAGC 1 cut(s) 486
BbvI GCAGC 8 cut(s) 469, 818, 1411, 1526, 2592, 2645, 2746, 2773
BccI CCATC 6 cut(s) 24, 134, 602, 956, 1036, 1412
BceAI ACGGC 4 cut(s) 38, 1749, 1781, 2546
BcgI CGANNNNNNTGC 2 cut(s) 1907, 1941
BcnI CCSGG 4 cut(s) 105, 353, 1412, 2420
BcoDI GTCTC 3 cut(s) 888, 1500, 1970
BfaI CTAG 5 cut(s) 363, 531, 1244, 2811, 2816
BfmI CTRYAG 3 cut(s) 1074, 1425, 1443
BfrI CTTAAG 1 cut(s) 2594
BfuAI ACCTGC 3 cut(s) 589, 1531, 2118
BmcAI AGTACT 1 cut(s) 1394
Bme18I GGWCC 9 cut(s) 21, 107, 349, 1439, 2287, 2447, 2599, 2617, 2732
BmeRI GACNNNNNGTC 2 cut(s) 1373, 2562
BmeT110I CYCGRG 6 cut(s) 94, 638, 774, 1396, 1752, 2442
BmrI ACTGGG 1 cut(s) 1700
BmsI GCATC 9 cut(s) 14, 500, 532, 1501, 1612, 1627, 1745, 1783, 2092
BmuI ACTGGG 1 cut(s) 1700
BpiI GAAGAC 2 cut(s) 1076, 1468
BpmI CTGGAG 3 cut(s) 484, 1010, 2780
Bpu10I CCTNAGC 2 cut(s) 486, 723
BpuMI CCSGG 4 cut(s) 105, 353, 1412, 2420
BsaAI YACGTR 2 cut(s) 1580, 1661
BsaHI GRCGYC 1 cut(s) 1369
BsaWI WCCGGW 2 cut(s) 838, 2734
BsaXI ACNNNNNCTCC 6 cut(s) 1413, 1443, 2169, 2199, 2697, 2727
Bse118I RCCGGY 2 cut(s) 2081, 2734
Bse1I ACTGG 5 cut(s) 399, 858, 1706, 1996, 2734
Bse21I CCTNAGG 1 cut(s) 212
Bse3DI GCAATG 3 cut(s) 408, 1860, 2430
BseAI TCCGGA 1 cut(s) 838
BseGI GGATG 3 cut(s) 35, 266, 491
BseMI GCAATG 3 cut(s) 408, 1860, 2430
BseMII CTCAG 8 cut(s) 26, 108, 203, 477, 714, 1828, 2115, 2715
BseNI ACTGG 5 cut(s) 399, 858, 1706, 1996, 2734
BseRI GAGGAG 4 cut(s) 1267, 1631, 2430, 2960
BseXI GCAGC 8 cut(s) 469, 818, 1411, 1526, 2592, 2645, 2746, 2773
BseYI CCCAGC 2 cut(s) 17, 339
BsgI GTGCAG 2 cut(s) 777, 2421
BshFI GGCC 9 cut(s) 53, 86, 161, 453, 680, 700, 2058, 2533, 2721
BshTI ACCGGT 1 cut(s) 2734
BsiHKAI GWGCWC 1 cut(s) 1815
BsiHKCI CYCGRG 6 cut(s) 94, 638, 774, 1396, 1752, 2442
BsiSI CCGG 9 cut(s) 63, 105, 352, 839, 1130, 1412, 2082, 2419, 2735
BslFI GGGAC 8 cut(s) 34, 393, 704, 980, 1224, 2498, 2585, 2817
BsmAI GTCTC 3 cut(s) 888, 1500, 1970
BsmBI CGTCTC 2 cut(s) 888, 1500
BsmFI GGGAC 8 cut(s) 34, 393, 704, 980, 1224, 2498, 2585, 2817
BsmI GAATGC 2 cut(s) 1687, 1689
BsnI GGCC 9 cut(s) 53, 86, 161, 453, 680, 700, 2058, 2533, 2721
BsoBI CYCGRG 6 cut(s) 94, 638, 774, 1396, 1752, 2442
Bsp1286I GDGCHC 2 cut(s) 781, 1815
Bsp13I TCCGGA 1 cut(s) 838
Bsp143I GATC 9 cut(s) 526, 841, 1404, 1469, 1622, 2006, 2094, 2772, 2845
Bsp19I CCATGG 1 cut(s) 2620
BspACI CCGC 7 cut(s) 1060, 1063, 1652, 1668, 2259, 2285, 2855
BspANI GGCC 9 cut(s) 53, 86, 161, 453, 680, 700, 2058, 2533, 2721
BspCNI CTCAG 8 cut(s) 27, 109, 204, 478, 715, 1827, 2116, 2714
BspEI TCCGGA 1 cut(s) 838
BspMAI CTGCAG 2 cut(s) 1078, 1429
BspMI ACCTGC 3 cut(s) 589, 1531, 2118
BspPI GGATC 8 cut(s) 521, 836, 849, 1477, 2014, 2089, 2102, 2853
BspQI GCTCTTC 2 cut(s) 426, 1647
BspTI CTTAAG 1 cut(s) 2594
BsrDI GCAATG 3 cut(s) 408, 1860, 2430
BsrFI RCCGGY 2 cut(s) 2081, 2734
BsrI ACTGG 5 cut(s) 399, 858, 1706, 1996, 2734
BssAI RCCGGY 2 cut(s) 2081, 2734
BssMI GATC 9 cut(s) 526, 841, 1404, 1469, 1622, 2006, 2094, 2772, 2845
BssNAI GTATAC 1 cut(s) 2070
BssNI GRCGYC 1 cut(s) 1369
BssSI CACGAG 1 cut(s) 1568
BssT1I CCWWGG 6 cut(s) 298, 454, 1695, 1845, 2620, 2841
Bst1107I GTATAC 1 cut(s) 2070
Bst2BI CACGAG 1 cut(s) 1568
Bst4CI ACNGT 6 cut(s) 262, 835, 1202, 1981, 2281, 2522
Bst6I CTCTTC 4 cut(s) 426, 1647, 2763, 2937
BstACI GRCGYC 1 cut(s) 1369
BstAFI CTTAAG 1 cut(s) 2594
BstAPI GCANNNNNTGC 1 cut(s) 1523
BstBAI YACGTR 2 cut(s) 1580, 1661
BstDSI CCRYGG 2 cut(s) 24, 2620
BstF5I GGATG 3 cut(s) 35, 266, 491
BstKTI GATC 9 cut(s) 529, 844, 1407, 1472, 1625, 2009, 2097, 2775, 2848
BstMAI GTCTC 3 cut(s) 888, 1500, 1970
BstMBI GATC 9 cut(s) 526, 841, 1404, 1469, 1622, 2006, 2094, 2772, 2845
BstNSI RCATGY 1 cut(s) 1857
BstSFI CTRYAG 3 cut(s) 1074, 1425, 1443
BstV1I GCAGC 8 cut(s) 469, 818, 1411, 1526, 2592, 2645, 2746, 2773
BstV2I GAAGAC 2 cut(s) 1076, 1468
BstX2I RGATCY 3 cut(s) 841, 2006, 2094
BstXI CCANNNNNNTGG 4 cut(s) 192, 455, 1459, 2729
BstYI RGATCY 3 cut(s) 841, 2006, 2094
BstZ17I GTATAC 1 cut(s) 2070
Bsu36I CCTNAGG 1 cut(s) 212
BsuRI GGCC 9 cut(s) 53, 86, 161, 453, 680, 700, 2058, 2533, 2721
BtgI CCRYGG 2 cut(s) 24, 2620
BtgZI GCGATG 1 cut(s) 123
BtsCI GGATG 3 cut(s) 35, 266, 491
BtsI GCAGTG 2 cut(s) 1597, 2092
BtsIMutI CAGTG 6 cut(s) 693, 851, 1384, 1597, 1822, 2092
BveI ACCTGC 3 cut(s) 589, 1531, 2118
CaiI CAGNNNCTG 2 cut(s) 482, 2149
Cfr10I RCCGGY 2 cut(s) 2081, 2734
CseI GACGC 1 cut(s) 1377
CsiI ACCWGGT 1 cut(s) 2560
Csp6I GTAC 3 cut(s) 615, 1393, 2653
CspAI ACCGGT 1 cut(s) 2734
CviQI GTAC 3 cut(s) 615, 1393, 2653
DpnI GATC 9 cut(s) 528, 843, 1406, 1471, 1624, 2008, 2096, 2774, 2847
DpnII GATC 9 cut(s) 526, 841, 1404, 1469, 1622, 2006, 2094, 2772, 2845
DraI TTTAAA 1 cut(s) 1831
DriI GACNNNNNGTC 2 cut(s) 1373, 2562
Eam1104I CTCTTC 4 cut(s) 426, 1647, 2763, 2937
Eam1105I GACNNNNNGTC 2 cut(s) 1373, 2562
EarI CTCTTC 4 cut(s) 426, 1647, 2763, 2937
Eco130I CCWWGG 6 cut(s) 298, 454, 1695, 1845, 2620, 2841
Eco147I AGGCCT 1 cut(s) 700
Eco24I GRGCYC 1 cut(s) 781
Eco32I GATATC 1 cut(s) 760
Eco47I GGWCC 9 cut(s) 21, 107, 349, 1439, 2287, 2447, 2599, 2617, 2732
Eco57I CTGAAG 4 cut(s) 723, 795, 1088, 1521
Eco72I CACGTG 2 cut(s) 1580, 1661
Eco81I CCTNAGG 1 cut(s) 212
Eco88I CYCGRG 6 cut(s) 94, 638, 774, 1396, 1752, 2442
EcoO109I RGGNCCY 4 cut(s) 451, 679, 2447, 2599
EcoRI GAATTC 1 cut(s) 672
EcoRV GATATC 1 cut(s) 760
EcoT14I CCWWGG 6 cut(s) 298, 454, 1695, 1845, 2620, 2841
EcoT22I ATGCAT 1 cut(s) 1689
EcoT38I GRGCYC 1 cut(s) 781
ErhI CCWWGG 6 cut(s) 298, 454, 1695, 1845, 2620, 2841
Esp3I CGTCTC 2 cut(s) 888, 1500
FalI AAGNNNNNCTT 2 cut(s) 2043, 2075
FaqI GGGAC 8 cut(s) 34, 393, 704, 980, 1224, 2498, 2585, 2817
FauNDI CATATG 1 cut(s) 1231
FblI GTMKAC 2 cut(s) 627, 2069
FokI GGATG 3 cut(s) 42, 253, 478
FriOI GRGCYC 1 cut(s) 781
FspBI CTAG 5 cut(s) 363, 531, 1244, 2811, 2816
GsaI CCCAGC 2 cut(s) 21, 343
GsuI CTGGAG 3 cut(s) 484, 1010, 2780
HaeIII GGCC 9 cut(s) 53, 86, 161, 453, 680, 700, 2058, 2533, 2721
HapII CCGG 9 cut(s) 63, 105, 352, 839, 1130, 1412, 2082, 2419, 2735
HgaI GACGC 1 cut(s) 1377
Hin1I GRCGYC 1 cut(s) 1369
HincII GTYRAC 3 cut(s) 12, 368, 922
HindII GTYRAC 3 cut(s) 12, 368, 922
HpaII CCGG 9 cut(s) 63, 105, 352, 839, 1130, 1412, 2082, 2419, 2735
HphI GGTGA 9 cut(s) 82, 250, 314, 536, 813, 1208, 1564, 2387, 2636
Hpy166II GTNNAC 7 cut(s) 12, 368, 628, 922, 2070, 2198, 2655
Hpy188I TCNGA 4 cut(s) 742, 1915, 2277, 2938
Hpy8I GTNNAC 7 cut(s) 12, 368, 628, 922, 2070, 2198, 2655
Hpy99I CGWCG 1 cut(s) 2907
HpyAV CCTTC 5 cut(s) 747, 908, 1496, 2168, 2365
HpyCH4III ACNGT 6 cut(s) 262, 835, 1202, 1981, 2281, 2522
HpyCH4IV ACGT 4 cut(s) 59, 897, 1579, 1660
HpySE526I ACGT 4 cut(s) 59, 897, 1579, 1660
Hsp92I GRCGYC 1 cut(s) 1369
Kpn2I TCCGGA 1 cut(s) 838
KroI GCCGGC 1 cut(s) 2081
KroNI GCCGGC 1 cut(s) 2083
Kzo9I GATC 9 cut(s) 526, 841, 1404, 1469, 1622, 2006, 2094, 2772, 2845
LguI GCTCTTC 2 cut(s) 426, 1647
Lsp1109I GCAGC 8 cut(s) 469, 818, 1411, 1526, 2592, 2645, 2746, 2773
LweI GCATC 9 cut(s) 14, 500, 532, 1501, 1612, 1627, 1745, 1783, 2092
MabI ACCWGGT 1 cut(s) 2560
MaeI CTAG 5 cut(s) 363, 531, 1244, 2811, 2816
MaeII ACGT 4 cut(s) 59, 897, 1579, 1660
MaeIII GTNAC 9 cut(s) 55, 238, 302, 1196, 2087, 2239, 2375, 2526, 2746
MalI GATC 9 cut(s) 528, 843, 1406, 1471, 1624, 2008, 2096, 2774, 2847
MboI GATC 9 cut(s) 526, 841, 1404, 1469, 1622, 2006, 2094, 2772, 2845
MfeI CAATTG 2 cut(s) 1923, 2037
MflI RGATCY 3 cut(s) 841, 2006, 2094
MhlI GDGCHC 2 cut(s) 781, 1815
MlyI GAGTC 3 cut(s) 54, 559, 962
MmeI TCCRAC 1 cut(s) 448
Mph1103I ATGCAT 1 cut(s) 1689
MroI TCCGGA 1 cut(s) 838
MroNI GCCGGC 1 cut(s) 2081
MroXI GAANNNNTTC 2 cut(s) 834, 1687
MseI TTAA 9 cut(s) 557, 1830, 2348, 2361, 2595, 2645, 2715, 2898, 2964
MslI CAYNNNNRTG 2 cut(s) 190, 1008
MspA1I CMGCKG 2 cut(s) 17, 1670
MspCI CTTAAG 1 cut(s) 2594
MspI CCGG 9 cut(s) 63, 105, 352, 839, 1130, 1412, 2082, 2419, 2735
MunI CAATTG 2 cut(s) 1923, 2037
Mva1269I GAATGC 2 cut(s) 1687, 1689
NaeI GCCGGC 1 cut(s) 2083
NciI CCSGG 4 cut(s) 105, 353, 1412, 2420
NcoI CCATGG 1 cut(s) 2620
NdeI CATATG 1 cut(s) 1231
NdeII GATC 9 cut(s) 526, 841, 1404, 1469, 1622, 2006, 2094, 2772, 2845
NgoMIV GCCGGC 1 cut(s) 2081
NmuCI GTSAC 5 cut(s) 238, 302, 1196, 2087, 2375
NsiI ATGCAT 1 cut(s) 1689
NspI RCATGY 1 cut(s) 1857
PaeR7I CTCGAG 4 cut(s) 94, 774, 1396, 2442
PaqCI CACCTGC 2 cut(s) 1531, 2118
PasI CCCWGGG 1 cut(s) 448
PceI AGGCCT 1 cut(s) 700
PciI ACATGT 1 cut(s) 1853
PciSI GCTCTTC 2 cut(s) 426, 1647
PctI GAATGC 2 cut(s) 1687, 1689
PdiI GCCGGC 1 cut(s) 2083
PdmI GAANNNNTTC 2 cut(s) 834, 1687
PfeI GAWTC 9 cut(s) 502, 1220, 1448, 1655, 1788, 2018, 2329, 2456, 2933
PflFI GACNNNGTC 1 cut(s) 2381
PflMI CCANNNNNTGG 1 cut(s) 30
PfoI TCCNGGA 5 cut(s) 351, 1451, 2411, 2796, 2880
PinAI ACCGGT 1 cut(s) 2734
PleI GAGTC 3 cut(s) 53, 558, 962
PmaCI CACGTG 2 cut(s) 1580, 1661
PmlI CACGTG 2 cut(s) 1580, 1661
PpsI GAGTC 3 cut(s) 53, 558, 962
Ppu21I YACGTR 2 cut(s) 1580, 1661
PpuMI RGGWCCY 2 cut(s) 2447, 2599
PscI ACATGT 1 cut(s) 1853
Psp5II RGGWCCY 2 cut(s) 2447, 2599
PspCI CACGTG 2 cut(s) 1580, 1661
PspFI CCCAGC 2 cut(s) 17, 339
PspPPI RGGWCCY 2 cut(s) 2447, 2599
PspXI VCTCGAGB 3 cut(s) 94, 774, 2442
PstI CTGCAG 2 cut(s) 1078, 1429
PstNI CAGNNNCTG 2 cut(s) 482, 2149
PsuI RGATCY 3 cut(s) 841, 2006, 2094
PsyI GACNNNGTC 1 cut(s) 2381
PvuII CAGCTG 1 cut(s) 17
RsaI GTAC 3 cut(s) 616, 1394, 2654
RsaNI GTAC 3 cut(s) 615, 1393, 2653
RseI CAYNNNNRTG 2 cut(s) 190, 1008
SapI GCTCTTC 2 cut(s) 426, 1647
SaqAI TTAA 9 cut(s) 557, 1830, 2348, 2361, 2595, 2645, 2715, 2898, 2964
Sau3AI GATC 9 cut(s) 526, 841, 1404, 1469, 1622, 2006, 2094, 2772, 2845
ScaI AGTACT 1 cut(s) 1394
SchI GAGTC 3 cut(s) 54, 559, 962
SduI GDGCHC 2 cut(s) 781, 1815
SexAI ACCWGGT 1 cut(s) 2560
SfaNI GCATC 9 cut(s) 14, 500, 532, 1501, 1612, 1627, 1745, 1783, 2092
SfcI CTRYAG 3 cut(s) 1074, 1425, 1443
Sfr274I CTCGAG 4 cut(s) 94, 774, 1396, 2442
SinI GGWCC 9 cut(s) 21, 107, 349, 1439, 2287, 2447, 2599, 2617, 2732
SlaI CTCGAG 4 cut(s) 94, 774, 1396, 2442
SmiMI CAYNNNNRTG 2 cut(s) 190, 1008
SmlI CTYRAG 5 cut(s) 94, 774, 1396, 2442, 2594
SmoI CTYRAG 5 cut(s) 94, 774, 1396, 2442, 2594
SseBI AGGCCT 1 cut(s) 700
SsiI CCGC 7 cut(s) 1060, 1063, 1652, 1668, 2259, 2285, 2855
SspMI CTAG 5 cut(s) 363, 531, 1244, 2811, 2816
StuI AGGCCT 1 cut(s) 700
StyI CCWWGG 6 cut(s) 298, 454, 1695, 1845, 2620, 2841
TaaI ACNGT 6 cut(s) 262, 835, 1202, 1981, 2281, 2522
TaiI ACGT 4 cut(s) 62, 900, 1582, 1663
TaqII GACCGA 1 cut(s) 266
TatI WGTACW 3 cut(s) 614, 1392, 2652
TauI GCSGC 3 cut(s) 1063, 1066, 2858
TfiI GAWTC 9 cut(s) 502, 1220, 1448, 1655, 1788, 2018, 2329, 2456, 2933
Tru1I TTAA 9 cut(s) 557, 1830, 2348, 2361, 2595, 2645, 2715, 2898, 2964
Tru9I TTAA 9 cut(s) 557, 1830, 2348, 2361, 2595, 2645, 2715, 2898, 2964
TscAI CASTG 6 cut(s) 693, 858, 1384, 1597, 1822, 2092
TseFI GTSAC 5 cut(s) 238, 302, 1196, 2087, 2375
TseI GCWGC 8 cut(s) 482, 806, 1424, 1514, 2580, 2633, 2759, 2786
Tsp45I GTSAC 5 cut(s) 238, 302, 1196, 2087, 2375
TspDTI ATGAA 6 cut(s) 397, 843, 1142, 1518, 2313, 2781
TspGWI ACGGA 1 cut(s) 484
TspRI CASTG 6 cut(s) 693, 858, 1384, 1597, 1822, 2092
Tth111I GACNNNGTC 1 cut(s) 2381
Van91I CCANNNNNTGG 1 cut(s) 30
Vha464I CTTAAG 1 cut(s) 2594
VpaK11BI GGWCC 9 cut(s) 21, 107, 349, 1439, 2287, 2447, 2599, 2617, 2732
XapI RAATTY 9 cut(s) 672, 732, 876, 926, 1138, 2154, 2264, 2639, 2831
XceI RCATGY 1 cut(s) 1857
XhoI CTCGAG 4 cut(s) 94, 774, 1396, 2442
XmiI GTMKAC 2 cut(s) 627, 2069
XmnI GAANNNNTTC 2 cut(s) 834, 1687
XspI CTAG 5 cut(s) 363, 531, 1244, 2811, 2816
ZrmI AGTACT 1 cut(s) 1394
Zsp2I ATGCAT 1 cut(s) 1689
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.