RLG00000011594

Staphylococcal nuclease domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0004359
Physical Location & Seq
Forward (+)
10785212 .. 10787992
2781 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000011594

Sequence Viewer

Length: 2781 bp
ATGGCCTCGTCAACAGGATGGATGAAAGGAAAAGTGAAGGCGGTTACTTCAGCGGATACCCTTGTGATCATGGCCCTCAACACAGACAAGACCGGAATCCCACCAGAAAAAACCATCACTCTTTCCTCACTTATGGCGCCCAGACTGGCCCGAAGAGGCGGCGTTGATGATCCCTTTGCATGGTACAGCAGAGAGTTTCTGAGGCAGCTCTGCTTAGGAGAGGAGGTTGTCTTCAAGGTGGACTATGTTATAAAATCCATAGGCCGGAATTTCGGTTCTGTCTTCCTTGCCAAGAGCAACGATAATGTCGCAAAGCTTGTTGTTTCTCAAGGCTGGGCAAAGGTCAGGGTGCCACAGAGTCAGCCAACAGCTCCGAGACAGGGCCAACAGAAACAGATAGTAGAAGTTAGTCCTTACCTTGAAGAACTTCTTAGCCTCGAAGAGAAAGCAAAGACTGAAGGTCTTGGTTGCTGGACCAAGGTTCCAGGTGCTGCTGAGGAATCTATTAGGTGTCTACCTCCCAACAACAACTTTGATGCAATGAGTCTGTTAGCAGAAAACAAGGGCCAGCCCATGGAGGCTATTGTGGAGCAAGTTCGTGATGGCAGCACAGTGGGGGTTTACTTGCTTCCGGAGTTTCAGTTTGTCCATGTTTTCGTTGCAGGAACTCGGGCCCCCTCCATGGAAAGGAGCCATGGAACAAAAGAAACTGTCGCAGTTGCTGAAGCGTTTGCATTGGAATCTAAATTCTTTACAGAAGCTCGTGTGTTGAACAGGGATGTGCATATTGTTCTGCAAGGTGTTGACAAGTTCAGAAATTTGATTGGGTCAGTGTATTACCACGATGGGGAATCCGAAAAGGACTTGGGGCTGGAGCTTGTGGAGAATGGTTATGCAAAATATGTCGAAGGGAGTGCAAACCTGATGGAGGAAGATGCAAAGAAACAGCTCAAGGCTGCAGAGCTTGAAGCTAAGAAAAGCAAATTGAGGATGTGGACAAATTACGTACCCCCAGCTACAGGTTCAAAGCCAATTCATGACAAGAATTTCACAGGAAAGGTTGTGGAGGTTGTGAGTGGGGACTGCATCATTGTGGCTGATGATTCTCTTCCATCTTGCAGTCCACTAGCAGAGAGGAGAGTCAATCTTTCTAGTATTTGGTGTCCGAAGATGCACAATCCTCGTAGTGATGAAAAGCCGGCTCCATATGCACGCGAAGCAAAGGAGTTGCTGAGGACACGCCTTATTGGTCGCCAAGTGAGTGTTCAATTGGAGTATTCTAGGAAGGTTGGCCAAGGAGATGCAATGGATTTTGGATCAGTCTTTCTGGAGGCTGTGGAGAAAGATGCAAGTGGGCAGGTTGGGGGGAATGTTGCTGAGCTCATGGTTGCACGTGGCCTTGGCACCGTTGTTAAACATCGAGATTTTGAGGAGAGATCACACTATTATGATGCTCTTCTTGCTGCTGAGTCGCGTGCTATTGCCGGCAAGAAAGGACGACATTCTTCCAAGGAAGCACCAGTCATGCACACAAGAGACTTGACAACTGAACCTGCCAAGAAAGCAAGCGAGTTCTTGCCATTCTTGCAGAGAAATAGGAAAATTCCTGCCATTGTAGAATATGTCGTTAGTGGTCATCGTTTTAAGCTATTTCTTCCCAAGGAAACATGCAGCATTGCCTTCTCTTTCTCAGGTGTGAGATGTCCCCGTCGTGAGGAGCCCTTTTCGGATGAAGCAATTGCAGTCATGAGGCGAAGAATAATGCAGAGAGAAGTTGAGATTGAGGTGGAGAGTGTTGACAAAACTGGAACTTTCTTGGGAACTTTATGGGAATCGGGGACCAATATGTCAATTGCTCTCGTTGGAGCTGGCCTTGCAAAATATACTCCCTTTGGCAACAGCGATAGGATTCTGGATGCTCACCTTCTTGAACAAGCTCAAAAATCTGCCAAACAGCAGAAATTGAAAATCTGGGAGAACTATGATCAAGGACAGGAAGTTTCCAAGAAACAGAAAAAGGTGCTAAATGTTGTAGTTACAGAGATTTTGGACAGCGGTAAATTTTATGTTCAGACAACTGAGGACCAAAACACTGCCTCTATTCAGCAACAGCTTGCTTCTTTGAATCTTCAAGAATCTGATCCTGTAACCGATACTGATTTCAAGCCTAATAAGGGTGACATTGTCCTTGCTCAGTTTAGTGCAGACAATTCTTGGAACCGTGCAATGATTATCAATGCTCCTAGAGCAGCTGTAGAATCCTCTCAAGATGAGTATGAAGTGTTCTACATTGATTACGGTAATCAAGAGGTTGTCCCTTTCAGCCAGTTACGGCCTCTCGACTCTTCTCTTGCCACTGCACCTGGCCTCGCCCAACTGTGCAGCCTTGCATATGTTAAGGTCCCAAGCTTGGAGGATAATTTTGGTGAAGAAGCAGCAGAGTACTTGAGTGAGCAAACATTGAGCAGTTCCGTAAAGTTCAGGGCCTTGATTGAGGGAAGGGATCTTTCAGCAGGAAAAGTTGTTAAAGGGCAGGGAACCGGACCAGCTCTTGTGGTAACTCTTGAGGCAGGTGATGATGAGATGAGTATAAATGCTGCCATGGTTCGAGAGGGACTTGCTAGCCTGGACAAAGAGAAGAAATTTTGGAAGTCTTCCGAAACCTTGAGAGAGTTCCAGGATGAAGCAAGGACCTATCGGCGAGGCATGTGGGAAGATGGAGATATTGATGCTCATGTGGACAGGGCTCGTCCCATTACAAAGACTGCTGGCAAGCGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000932 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003824 GO:0004518 GO:0005488 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005737 GO:0005783 GO:0005829 GO:0005886 GO:0005911 GO:0006082 GO:0006139 GO:0006396 GO:0006397 GO:0006401 GO:0006402 GO:0006629 GO:0006720 GO:0006721 GO:0006725 GO:0006807 GO:0006950 GO:0006970 GO:0007275 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009056 GO:0009057 GO:0009058 GO:0009266 GO:0009408 GO:0009506 GO:0009507 GO:0009536 GO:0009628 GO:0009651 GO:0009685 GO:0009686 GO:0009791 GO:0009845 GO:0009889 GO:0009891 GO:0009892 GO:0009893 GO:0009987 GO:0010035 GO:0010038 GO:0010371 GO:0010372 GO:0010467 GO:0010468 GO:0010494 GO:0010565 GO:0010605 GO:0010629 GO:0010817 GO:0012505 GO:0016020 GO:0016053 GO:0016070 GO:0016071 GO:0016101 GO:0016102 GO:0016114 GO:0016787 GO:0016788 GO:0019216 GO:0019222 GO:0019439 GO:0019747 GO:0019752 GO:0030054 GO:0030312 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031967 GO:0031975 GO:0032350 GO:0032352 GO:0032501 GO:0032502 GO:0032991 GO:0033554 GO:0034605 GO:0034641 GO:0034655 GO:0035770 GO:0036464 GO:0042221 GO:0042445 GO:0042446 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043436 GO:0043455 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044255 GO:0044260 GO:0044265 GO:0044270 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045828 GO:0045834 GO:0046394 GO:0046483 GO:0046686 GO:0046700 GO:0046885 GO:0046886 GO:0046889 GO:0046890 GO:0048518 GO:0048519 GO:0048522 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0055044 GO:0060255 GO:0062012 GO:0062013 GO:0065007 GO:0065008 GO:0071704 GO:0071944 GO:0080090 GO:0090304 GO:0090305 GO:0090351 GO:0097159 GO:1901360 GO:1901361 GO:1901363 GO:1901575 GO:1901576 GO:1990904
KEGG Pathways
Metabolic & Signaling
ko05169 ko05203 map05169 map05203
Pfam Domains
Protein Families
SNase TUDOR

Protein Analysis

927

Amino Acids

102.61

Weight (kDa)

6.07

Isoelectric Point (pI)

42.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SNase PF00565 38 - 159 5.6e-06 Staphylococcal nuclease homologue
SNase PF00565 225 - 333 8.9e-14 Staphylococcal nuclease homologue
SNase PF00565 380 - 499 7.9e-06 Staphylococcal nuclease homologue
SNase PF00565 562 - 660 3.8e-15 Staphylococcal nuclease homologue
TUDOR PF00567 672 - 797 1.4e-23 Tudor domain
SNase PF00565 804 - 906 1.1e-07 Staphylococcal nuclease homologue
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 251
AarI CACCTGC 1 cut(s) 2561
AasI GACNNNNNNGTC 1 cut(s) 1846
Acc36I ACCTGC 3 cut(s) 1348, 1561, 2561
AccB1I GGYRCC 3 cut(s) 136, 349, 1403
AccB7I CCANNNNNTGG 1 cut(s) 574
AccI GTMKAC 1 cut(s) 514
AccII CGCG 2 cut(s) 1215, 1474
AccIII TCCGGA 1 cut(s) 631
AciI CCGC 4 cut(s) 41, 53, 159, 2055
AclWI GGATC 4 cut(s) 164, 1324, 2135, 2511
AcoI YGGCCR 1 cut(s) 1291
AcsI RAATTY 7 cut(s) 268, 746, 817, 1045, 1602, 2060, 2642
AcuI CTGAAG 3 cut(s) 33, 477, 744
AcvI CACGTG 1 cut(s) 1394
AcyI GRCGYC 1 cut(s) 137
AfaI GTAC 3 cut(s) 185, 1008, 2444
AhdI GACNNNNNGTC 1 cut(s) 459
AjnI CCWGG 4 cut(s) 484, 2362, 2625, 2676
AjuI GAANNNNNNNTTGG 2 cut(s) 1248, 1280
AloI GAACNNNNNNTCC 2 cut(s) 259, 291
Alw21I GWGCWC 1 cut(s) 1383
Alw26I GTCTC 2 cut(s) 370, 1530
AlwI GGATC 4 cut(s) 164, 1324, 2135, 2511
AlwNI CAGNNNCTG 2 cut(s) 491, 722
Ama87I CYCGRG 1 cut(s) 669
Aor13HI TCCGGA 1 cut(s) 631
ApaI GGGCCC 1 cut(s) 676
ApoI RAATTY 7 cut(s) 268, 746, 817, 1045, 1602, 2060, 2642
Asp700I GAANNNNTTC 1 cut(s) 426
AspLEI GCGC 1 cut(s) 139
AsuHPI GGTGA 4 cut(s) 1913, 2189, 2438, 2585
AsuNHI GCTAGC 1 cut(s) 2621
AvaI CYCGRG 1 cut(s) 669
AvaII GGWCC 6 cut(s) 474, 1839, 2083, 2401, 2543, 2691
BaeGI GKGCMC 1 cut(s) 676
BaeI ACNNNNGTAYC 2 cut(s) 48, 81
BalI TGGCCA 1 cut(s) 1293
BanI GGYRCC 3 cut(s) 136, 349, 1403
BanII GRGCYC 4 cut(s) 676, 1383, 1722, 2749
BauI CACGAG 1 cut(s) 762
BbrPI CACGTG 1 cut(s) 1394
BbsI GAAGAC 3 cut(s) 223, 274, 2646
Bbv12I GWGCWC 1 cut(s) 1383
BbvCI CCTCAGC 2 cut(s) 495, 1232
BccI CCATC 7 cut(s) 12, 122, 596, 839, 919, 1120, 2711
BceAI ACGGC 1 cut(s) 2348
BcgI CGANNNNNNTGC 4 cut(s) 896, 930, 1163, 1197
BciT130I CCWGG 4 cut(s) 486, 2364, 2627, 2678
BciVI GTATCC 1 cut(s) 49
BclI TGATCA 2 cut(s) 66, 1984
BcoDI GTCTC 2 cut(s) 370, 1530
BfaI CTAG 5 cut(s) 1127, 1152, 1281, 2244, 2622
BfmI CTRYAG 3 cut(s) 957, 1017, 2253
BfoI RGCGCY 1 cut(s) 140
BfuAI ACCTGC 3 cut(s) 1348, 1561, 2561
BfuI GTATCC 1 cut(s) 49
BlpI GCTNAGC 1 cut(s) 1377
BmcAI AGTACT 1 cut(s) 2444
Bme1390I CCNGG 4 cut(s) 486, 2364, 2627, 2678
Bme18I GGWCC 6 cut(s) 474, 1839, 2083, 2401, 2543, 2691
BmeRI GACNNNNNGTC 1 cut(s) 459
BmeT110I CYCGRG 1 cut(s) 669
BmrFI CCNGG 4 cut(s) 486, 2364, 2627, 2678
BmsI GCATC 9 cut(s) 526, 925, 1095, 1161, 1291, 1336, 1441, 1906, 2719
BmtI GCTAGC 1 cut(s) 2625
BpiI GAAGAC 3 cut(s) 223, 274, 2646
BpmI CTGGAG 2 cut(s) 893, 1349
Bpu10I CCTNAGC 3 cut(s) 214, 495, 1232
Bpu1102I GCTNAGC 1 cut(s) 1377
BpuEI CTTGAG 6 cut(s) 312, 935, 2250, 2467, 2585, 2686
BsaAI YACGTR 2 cut(s) 1006, 1394
BsaHI GRCGYC 1 cut(s) 137
BsaJI CCNNGG 9 cut(s) 477, 573, 681, 694, 1294, 1399, 1509, 1659, 2601
BsaWI WCCGGW 3 cut(s) 92, 631, 2540
BsaXI ACNNNNNCTCC 4 cut(s) 210, 240, 626, 656
Bse118I RCCGGY 2 cut(s) 1198, 1484
Bse1I ACTGG 4 cut(s) 150, 1520, 1810, 2326
Bse3DI GCAATG 4 cut(s) 546, 1311, 1674, 2232
BseAI TCCGGA 1 cut(s) 631
BseBI CCWGG 4 cut(s) 486, 2364, 2627, 2678
BseDI CCNNGG 9 cut(s) 477, 573, 681, 694, 1294, 1399, 1509, 1659, 2601
BseGI GGATG 7 cut(s) 23, 27, 784, 996, 1735, 1921, 2686
BseMI GCAATG 4 cut(s) 546, 1311, 1674, 2232
BseMII CTCAG 8 cut(s) 191, 486, 1223, 1368, 1458, 1704, 2070, 2207
BseNI ACTGG 4 cut(s) 150, 1520, 1810, 2326
BseRI GAGGAG 4 cut(s) 236, 1150, 1445, 1730
BseSI GKGCMC 1 cut(s) 676
BseYI CCCAGC 2 cut(s) 333, 1012
BsgI GTGCAG 3 cut(s) 2223, 2343, 2401
Bsh1236I CGCG 2 cut(s) 1215, 1474
BshNI GGYRCC 3 cut(s) 136, 349, 1403
BsiHKAI GWGCWC 1 cut(s) 1383
BsiHKCI CYCGRG 1 cut(s) 669
BsiSI CCGG 6 cut(s) 93, 265, 632, 1199, 1485, 2541
BslFI GGGAC 7 cut(s) 1094, 1689, 1852, 2300, 2387, 2628, 2736
BsmAI GTCTC 2 cut(s) 370, 1530
BsmFI GGGAC 7 cut(s) 1094, 1689, 1852, 2300, 2387, 2628, 2736
BsoBI CYCGRG 1 cut(s) 669
Bsp120I GGGCCC 1 cut(s) 672
Bsp1286I GDGCHC 4 cut(s) 676, 1383, 1722, 2749
Bsp13I TCCGGA 1 cut(s) 631
Bsp143I GATC 7 cut(s) 66, 169, 1316, 1436, 1984, 2140, 2503
Bsp1720I GCTNAGC 1 cut(s) 1377
Bsp19I CCATGG 4 cut(s) 573, 681, 694, 2601
BspACI CCGC 4 cut(s) 41, 53, 159, 2055
BspCNI CTCAG 8 cut(s) 192, 487, 1224, 1369, 1459, 1703, 2071, 2206
BspEI TCCGGA 1 cut(s) 631
BspFNI CGCG 2 cut(s) 1215, 1474
BspHI TCATGA 2 cut(s) 1036, 1746
BspMAI CTGCAG 1 cut(s) 961
BspMI ACCTGC 3 cut(s) 1348, 1561, 2561
BspOI GCTAGC 1 cut(s) 2625
BspPI GGATC 4 cut(s) 164, 1324, 2135, 2511
BspQI GCTCTTC 1 cut(s) 1461
BspT107I GGYRCC 3 cut(s) 136, 349, 1403
BsrDI GCAATG 4 cut(s) 546, 1311, 1674, 2232
BsrFI RCCGGY 2 cut(s) 1198, 1484
BsrI ACTGG 4 cut(s) 150, 1520, 1810, 2326
BssAI RCCGGY 2 cut(s) 1198, 1484
BssECI CCNNGG 9 cut(s) 477, 573, 681, 694, 1294, 1399, 1509, 1659, 2601
BssMI GATC 7 cut(s) 66, 169, 1316, 1436, 1984, 2140, 2503
BssNI GRCGYC 1 cut(s) 137
BssSI CACGAG 1 cut(s) 762
BssT1I CCWWGG 9 cut(s) 477, 573, 681, 694, 1294, 1399, 1509, 1659, 2601
Bst2BI CACGAG 1 cut(s) 762
Bst2UI CCWGG 4 cut(s) 486, 2364, 2627, 2678
Bst4CI ACNGT 6 cut(s) 613, 712, 1408, 2222, 2300, 2379
Bst6I CTCTTC 5 cut(s) 148, 435, 1113, 1461, 2350
BstACI GRCGYC 1 cut(s) 137
BstBAI YACGTR 2 cut(s) 1006, 1394
BstDSI CCRYGG 4 cut(s) 573, 681, 694, 2601
BstENI CCTNNNNNAGG 1 cut(s) 926
BstF5I GGATG 7 cut(s) 23, 27, 784, 996, 1735, 1921, 2686
BstFNI CGCG 2 cut(s) 1215, 1474
BstH2I RGCGCY 1 cut(s) 140
BstHHI GCGC 1 cut(s) 139
BstKTI GATC 7 cut(s) 69, 172, 1319, 1439, 1987, 2143, 2506
BstMAI GTCTC 2 cut(s) 370, 1530
BstMBI GATC 7 cut(s) 66, 169, 1316, 1436, 1984, 2140, 2503
BstMWI GCNNNNNNNGC 7 cut(s) 1208, 1217, 1460, 1562, 1585, 1874, 2246
BstNI CCWGG 4 cut(s) 486, 2364, 2627, 2678
BstNSI RCATGY 2 cut(s) 1671, 2710
BstSCI CCNGG 4 cut(s) 484, 2362, 2625, 2676
BstSFI CTRYAG 3 cut(s) 957, 1017, 2253
BstSLI GKGCMC 1 cut(s) 676
BstSNI TACGTA 1 cut(s) 1006
BstUI CGCG 2 cut(s) 1215, 1474
BstV2I GAAGAC 3 cut(s) 223, 274, 2646
BstX2I RGATCY 1 cut(s) 2503
BstYI RGATCY 1 cut(s) 2503
BsuI GTATCC 1 cut(s) 49
BtgI CCRYGG 4 cut(s) 573, 681, 694, 2601
BtsCI GGATG 7 cut(s) 23, 27, 784, 996, 1735, 1921, 2686
BtsI GCAGTG 2 cut(s) 2091, 2355
BtsIMutI CAGTG 4 cut(s) 618, 837, 2091, 2355
BveI ACCTGC 3 cut(s) 1348, 1561, 2561
CaiI CAGNNNCTG 2 cut(s) 491, 722
CciI TCATGA 2 cut(s) 1036, 1746
CfoI GCGC 1 cut(s) 139
Cfr10I RCCGGY 2 cut(s) 1198, 1484
Csp6I GTAC 3 cut(s) 184, 1007, 2443
CviQI GTAC 3 cut(s) 184, 1007, 2443
DinI GGCGCC 1 cut(s) 138
DpnI GATC 7 cut(s) 68, 171, 1318, 1438, 1986, 2142, 2505
DpnII GATC 7 cut(s) 66, 169, 1316, 1436, 1984, 2140, 2503
DrdI GACNNNNNNGTC 1 cut(s) 1846
DriI GACNNNNNGTC 1 cut(s) 459
DseDI GACNNNNNNGTC 1 cut(s) 1846
EaeI YGGCCR 1 cut(s) 1291
Eam1104I CTCTTC 5 cut(s) 148, 435, 1113, 1461, 2350
Eam1105I GACNNNNNGTC 1 cut(s) 459
EarI CTCTTC 5 cut(s) 148, 435, 1113, 1461, 2350
Ecl136II GAGCTC 1 cut(s) 1381
Eco105I TACGTA 1 cut(s) 1006
Eco130I CCWWGG 9 cut(s) 477, 573, 681, 694, 1294, 1399, 1509, 1659, 2601
Eco24I GRGCYC 4 cut(s) 676, 1383, 1722, 2749
Eco47I GGWCC 6 cut(s) 474, 1839, 2083, 2401, 2543, 2691
Eco53kI GAGCTC 1 cut(s) 1381
Eco57I CTGAAG 3 cut(s) 33, 477, 744
Eco72I CACGTG 1 cut(s) 1394
Eco88I CYCGRG 1 cut(s) 669
EcoICRI GAGCTC 1 cut(s) 1381
EcoNI CCTNNNNNAGG 1 cut(s) 926
EcoO109I RGGNCCY 4 cut(s) 673, 2401, 2484, 2691
EcoRII CCWGG 4 cut(s) 484, 2362, 2625, 2676
EcoT14I CCWWGG 9 cut(s) 477, 573, 681, 694, 1294, 1399, 1509, 1659, 2601
EcoT38I GRGCYC 4 cut(s) 676, 1383, 1722, 2749
EgeI GGCGCC 1 cut(s) 138
EheI GGCGCC 1 cut(s) 138
ErhI CCWWGG 9 cut(s) 477, 573, 681, 694, 1294, 1399, 1509, 1659, 2601
FalI AAGNNNNNCTT 2 cut(s) 414, 446
FaqI GGGAC 7 cut(s) 1094, 1689, 1852, 2300, 2387, 2628, 2736
FauNDI CATATG 2 cut(s) 1207, 2392
FbaI TGATCA 2 cut(s) 66, 1984
FblI GTMKAC 1 cut(s) 514
FokI GGATG 7 cut(s) 30, 34, 791, 1003, 1742, 1928, 2693
FriOI GRGCYC 4 cut(s) 676, 1383, 1722, 2749
FspBI CTAG 5 cut(s) 1127, 1152, 1281, 2244, 2622
GlaI GCGC 1 cut(s) 138
GsaI CCCAGC 2 cut(s) 337, 1016
GsuI CTGGAG 2 cut(s) 893, 1349
HaeII RGCGCY 1 cut(s) 140
HapII CCGG 6 cut(s) 93, 265, 632, 1199, 1485, 2541
HhaI GCGC 1 cut(s) 139
Hin1I GRCGYC 1 cut(s) 137
Hin6I GCGC 1 cut(s) 137
HinP1I GCGC 1 cut(s) 137
HincII GTYRAC 3 cut(s) 12, 805, 1798
HindII GTYRAC 3 cut(s) 12, 805, 1798
HindIII AAGCTT 2 cut(s) 314, 2407
HpaII CCGG 6 cut(s) 93, 265, 632, 1199, 1485, 2541
HphI GGTGA 4 cut(s) 1913, 2189, 2438, 2585
Hpy166II GTNNAC 9 cut(s) 12, 241, 515, 622, 805, 996, 1124, 1798, 2740
Hpy188I TCNGA 9 cut(s) 201, 375, 815, 856, 1167, 1729, 2073, 2140, 2659
Hpy8I GTNNAC 9 cut(s) 12, 241, 515, 622, 805, 996, 1124, 1798, 2740
Hpy99I CGWCG 1 cut(s) 1713
HpyAV CCTTC 7 cut(s) 31, 452, 902, 1279, 1690, 1934, 2493
HpyCH4III ACNGT 6 cut(s) 613, 712, 1408, 2222, 2300, 2379
HpyCH4IV ACGT 2 cut(s) 1005, 1393
HpyF10VI GCNNNNNNNGC 7 cut(s) 1208, 1217, 1460, 1562, 1585, 1874, 2246
HpySE526I ACGT 2 cut(s) 1005, 1393
Hsp92I GRCGYC 1 cut(s) 137
HspAI GCGC 1 cut(s) 137
KasI GGCGCC 1 cut(s) 136
Kpn2I TCCGGA 1 cut(s) 631
KroI GCCGGC 2 cut(s) 1198, 1484
KroNI GCCGGC 2 cut(s) 1200, 1486
Ksp22I TGATCA 2 cut(s) 66, 1984
Kzo9I GATC 7 cut(s) 66, 169, 1316, 1436, 1984, 2140, 2503
LguI GCTCTTC 1 cut(s) 1461
LmnI GCTCC 8 cut(s) 376, 589, 690, 874, 1207, 1717, 1865, 2245
LweI GCATC 9 cut(s) 526, 925, 1095, 1161, 1291, 1336, 1441, 1906, 2719
MaeI CTAG 5 cut(s) 1127, 1152, 1281, 2244, 2622
MaeII ACGT 2 cut(s) 1005, 1393
MaeIII GTNAC 6 cut(s) 43, 2035, 2146, 2177, 2328, 2557
MalI GATC 7 cut(s) 68, 171, 1318, 1438, 1986, 2142, 2505
MboI GATC 7 cut(s) 66, 169, 1316, 1436, 1984, 2140, 2503
MfeI CAATTG 3 cut(s) 1268, 1737, 1851
MflI RGATCY 1 cut(s) 2503
MhlI GDGCHC 4 cut(s) 676, 1383, 1722, 2749
MlsI TGGCCA 1 cut(s) 1293
MluNI TGGCCA 1 cut(s) 1293
Mly113I GGCGCC 1 cut(s) 137
MlyI GAGTC 5 cut(s) 367, 553, 1149, 1478, 2336
MmeI TCCRAC 1 cut(s) 1843
Mox20I TGGCCA 1 cut(s) 1293
MroI TCCGGA 1 cut(s) 631
MroNI GCCGGC 2 cut(s) 1198, 1484
MroXI GAANNNNTTC 1 cut(s) 426
MscI TGGCCA 1 cut(s) 1293
MseI TTAA 4 cut(s) 1413, 1644, 2397, 2526
MslI CAYNNNNRTG 2 cut(s) 1091, 1446
Msp20I TGGCCA 1 cut(s) 1293
MspA1I CMGCKG 3 cut(s) 53, 2055, 2252
MspI CCGG 6 cut(s) 93, 265, 632, 1199, 1485, 2541
MspR9I CCNGG 4 cut(s) 486, 2364, 2627, 2678
MunI CAATTG 3 cut(s) 1268, 1737, 1851
MvaI CCWGG 4 cut(s) 486, 2364, 2627, 2678
MvnI CGCG 2 cut(s) 1215, 1474
MwoI GCNNNNNNNGC 7 cut(s) 1208, 1217, 1460, 1562, 1585, 1874, 2246
NaeI GCCGGC 2 cut(s) 1200, 1486
NarI GGCGCC 1 cut(s) 137
NcoI CCATGG 4 cut(s) 573, 681, 694, 2601
NdeI CATATG 2 cut(s) 1207, 2392
NdeII GATC 7 cut(s) 66, 169, 1316, 1436, 1984, 2140, 2503
NgoMIV GCCGGC 2 cut(s) 1198, 1484
NheI GCTAGC 1 cut(s) 2621
NmuCI GTSAC 1 cut(s) 2177
NspI RCATGY 2 cut(s) 1671, 2710
PagI TCATGA 2 cut(s) 1036, 1746
PaqCI CACCTGC 1 cut(s) 2561
PciSI GCTCTTC 1 cut(s) 1461
PdiI GCCGGC 2 cut(s) 1200, 1486
PdmI GAANNNNTTC 1 cut(s) 426
PflFI GACNNNGTC 1 cut(s) 2183
PflMI CCANNNNNTGG 1 cut(s) 574
PfoI TCCNGGA 1 cut(s) 2676
PleI GAGTC 5 cut(s) 366, 552, 1148, 1477, 2336
PluTI GGCGCC 1 cut(s) 140
PmaCI CACGTG 1 cut(s) 1394
PmlI CACGTG 1 cut(s) 1394
PpsI GAGTC 5 cut(s) 366, 552, 1148, 1477, 2336
Ppu21I YACGTR 2 cut(s) 1006, 1394
PpuMI RGGWCCY 2 cut(s) 2401, 2691
PsiI TTATAA 1 cut(s) 251
Psp124BI GAGCTC 1 cut(s) 1383
Psp5II RGGWCCY 2 cut(s) 2401, 2691
Psp6I CCWGG 4 cut(s) 484, 2362, 2625, 2676
PspCI CACGTG 1 cut(s) 1394
PspFI CCCAGC 2 cut(s) 333, 1012
PspGI CCWGG 4 cut(s) 484, 2362, 2625, 2676
PspOMI GGGCCC 1 cut(s) 672
PspPPI RGGWCCY 2 cut(s) 2401, 2691
PsrI GAACNNNNNNTAC 2 cut(s) 2267, 2299
PstI CTGCAG 1 cut(s) 961
PstNI CAGNNNCTG 2 cut(s) 491, 722
PsuI RGATCY 1 cut(s) 2503
PsyI GACNNNGTC 1 cut(s) 2183
PvuII CAGCTG 1 cut(s) 2252
RsaI GTAC 3 cut(s) 185, 1008, 2444
RsaNI GTAC 3 cut(s) 184, 1007, 2443
RseI CAYNNNNRTG 2 cut(s) 1091, 1446
SacI GAGCTC 1 cut(s) 1383
SapI GCTCTTC 1 cut(s) 1461
SaqAI TTAA 4 cut(s) 1413, 1644, 2397, 2526
Sau3AI GATC 7 cut(s) 66, 169, 1316, 1436, 1984, 2140, 2503
ScaI AGTACT 1 cut(s) 2444
SchI GAGTC 5 cut(s) 367, 553, 1149, 1478, 2336
ScrFI CCNGG 4 cut(s) 486, 2364, 2627, 2678
SduI GDGCHC 4 cut(s) 676, 1383, 1722, 2749
SfaNI GCATC 9 cut(s) 526, 925, 1095, 1161, 1291, 1336, 1441, 1906, 2719
SfcI CTRYAG 3 cut(s) 957, 1017, 2253
SfoI GGCGCC 1 cut(s) 138
SinI GGWCC 6 cut(s) 474, 1839, 2083, 2401, 2543, 2691
SmiMI CAYNNNNRTG 2 cut(s) 1091, 1446
SmlI CTYRAG 6 cut(s) 327, 950, 2265, 2446, 2564, 2665
SmoI CTYRAG 6 cut(s) 327, 950, 2265, 2446, 2564, 2665
SnaBI TACGTA 1 cut(s) 1006
SsiI CCGC 4 cut(s) 41, 53, 159, 2055
SspDI GGCGCC 1 cut(s) 136
SspMI CTAG 5 cut(s) 1127, 1152, 1281, 2244, 2622
SstI GAGCTC 1 cut(s) 1383
StyD4I CCNGG 4 cut(s) 484, 2362, 2625, 2676
StyI CCWWGG 9 cut(s) 477, 573, 681, 694, 1294, 1399, 1509, 1659, 2601
TaaI ACNGT 6 cut(s) 613, 712, 1408, 2222, 2300, 2379
TaiI ACGT 2 cut(s) 1008, 1396
TaqI TCGA 5 cut(s) 438, 906, 1420, 2340, 2608
TatI WGTACW 1 cut(s) 2442
TauI GCSGC 1 cut(s) 162
Tru1I TTAA 4 cut(s) 1413, 1644, 2397, 2526
Tru9I TTAA 4 cut(s) 1413, 1644, 2397, 2526
TscAI CASTG 4 cut(s) 618, 837, 2098, 2362
TseFI GTSAC 1 cut(s) 2177
Tsp45I GTSAC 1 cut(s) 2177
TspDTI ATGAA 6 cut(s) 38, 1025, 1206, 1746, 2292, 2697
TspGWI ACGGA 1 cut(s) 2461
TspRI CASTG 4 cut(s) 618, 837, 2098, 2362
Tth111I GACNNNGTC 1 cut(s) 2183
Van91I CCANNNNNTGG 1 cut(s) 574
VpaK11BI GGWCC 6 cut(s) 474, 1839, 2083, 2401, 2543, 2691
XagI CCTNNNNNAGG 1 cut(s) 926
XapI RAATTY 7 cut(s) 268, 746, 817, 1045, 1602, 2060, 2642
XceI RCATGY 2 cut(s) 1671, 2710
XmiI GTMKAC 1 cut(s) 514
XmnI GAANNNNTTC 1 cut(s) 426
XspI CTAG 5 cut(s) 1127, 1152, 1281, 2244, 2622
ZrmI AGTACT 1 cut(s) 2444
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.