FvH4_2g28700

Staphylococcal nuclease domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0004359
Physical Location & Seq
Reverse (-)
22430269 .. 22433900
3632 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g28700.t1

Sequence Viewer

Length: 2187 bp
ATGAGTTTGTTAGCAGAAAACAAAGGTCAGCCTGTGGAAGCTTTTGTGGAGCAGGTTCGTGATGGGAGCACAATTGGGGTTTACTTGCTTCCAGAATTTCAGTTTGTCCATGTATTGGTTGCAGGAACTCGAGCGCCCTCGATGGAAAAGAGCCATGGAACAACAAGAATTGTTCAAGCTGCTGAAACATTTGCATTGGAATCTAAATTCTATACAGAATCTCGTGTGTTGAACAAGGATGTGCATGTTGTTCTACATGGTGTTGACAAGTTCAACAATTTGATAGGGTCATTGCATTATCCTGAAGGAGAATCCGATAAGGACTTGGGGCTGGAGCTTGTGAAGAATGGTTATGCAAAATATGTTGAATGGAGTGCAAACCTGATGGAGGAAGAAGCAAAGAAACAGCTCAAGGCTGCAGAGCTTGAGGCTAAGAAAAGCAAGTTGAGGATTTGGAAAAACTATTTACCCCCAGCTACAGGCTTGAAGCCAATTCATGACAAGAATTTCACAGGAAAGGTTGTGGAGGTAGTGAGTGGGGACTGCATCATTGTGGCCGATGATTCTCTTCCATTTGGTAGTCCACTAGCAGAGCGGAGAGTCCATCTTTCTAGCATTCGGTGTCCGAAGATGGGCAATCCTCGTAAAAATGAAAAGCCGGCTTCTTATGCACGCGAAGCCAAGGAGTTGCTGAGGACACGCTTGATTGGTCGTGAAGTGAGTGTTCAATTGGAGTATTCTAGGAAGGATGGCCAAGGACATGAAATGAATTTTGGATCAGTCTTTGTAAAGGTTGTGGGGAAAGATGCAACCGAGCAGGTTGGCGGGAACGTTGCTGAGCTCATGGTTGCACGTGGCCTTGGCACCGTTGTTAGACATCGAGATTTTGCGGAGAGATCGCACTATTATGATGCTCTTCTTGCTGCTGAATCATGTGCTATTGCCGGTAAGAAAGGACAGCATTCTTCCAAGGAAGTCTCAGTCATGTACACAAGAGACCTGACTACTGAACCTGTCAAGAAAGCAAGCGAGTTCTTGCCATTCTTGCAGAGAACTAGGAAAATATCTGCCATTGTAGAATATGTCTTTAGTGGTCATCATTTTAAGCTATTTCTTCCCAAGGAAACATGCAGCATTGCCTTCTCTTTCTCAGGGGTGAGATGTCCCCGTCGTGACGAGCCTTTCTCGGATGAAGCAATTGCAGTGATGAGGCAAAGAATAATGCAGAGAGATGTTGAGATTGAGGTGGAGAGTGTTGACAAAACTGGAACTTTTGTGGGAACTTTATGGGAGTCGGGGATCAATATGTCAATTGCACTTGTTGGAGATGGCCTTGCAAAATATACTCCGTTTGGCAACAACGATAGGATTCCAGATGCTCATCTTCTTGAACAAGTTCAGAAATCTGCCAAACAGCAGAAACTGAAAATTTGGGAGAAGTATGATGGACAAGAAGTTTCCAGCAAGCAAAAAGAAGTGCTAAAAGTTGAAGTTACACGGGTTTTGGATAGTGGTAAGTTTTATGTTAAGATAATTGAGGACCAAAACACTGCCTCTATTCAGGAACAGCTTGCTTCTTTGAATCTTCAAGAAGCTGATCCCGTAACCGATATTGATTTCAAGCCTAAGAAGGGTGACATTGTCCTTGCTCAGTTTAGTGAAGATAATTCTTGGAACCGTGCAATGATTGTCAATGCCCTTCGGGCAGATACAAACTCCTCTCAAGACGAGTATGAAGTGTTCTACATTGACTTTGGTACTCAAGAGGTTGTCCCTTTCAATCAATTACGACCTCTTGACTCTTCTCTTGCCACTGTACCTGGCCTCGCCCAACTATGTAGCCTTGCATACGTTAAAGTCCCAAGCTGGGAGGATAAGTGTGGTGAAGAAGCAGTAGAGTACTTGAGTGAGCAAATGTTGAGCAGTTCCAAACCGTTCAGGGCCTTGATTGAGGGAAGGGATCTTTCAAAAGGAAAAGTCGTTAAAGGGCAGGGAACGGGACCAGCTCTTTTGGTAACTCTTGAGGCAGGTAATGAAGAGATGAGTATAAATGCTGCCATGCTTCGAGATGGACTTGCTAGCTTGGACAAAGAGAAGAAATTTTGGAAGTCTTCGGAAACCTTAAGAGAGTTCCAGGACGAAGCAAGGACCGATCGACGAGGCATCTGGGACAGACGGAGAAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000932 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003824 GO:0004518 GO:0005488 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005737 GO:0005783 GO:0005829 GO:0005886 GO:0005911 GO:0006082 GO:0006139 GO:0006396 GO:0006397 GO:0006401 GO:0006402 GO:0006629 GO:0006720 GO:0006721 GO:0006725 GO:0006807 GO:0006950 GO:0006970 GO:0007275 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009056 GO:0009057 GO:0009058 GO:0009266 GO:0009408 GO:0009506 GO:0009507 GO:0009536 GO:0009628 GO:0009651 GO:0009685 GO:0009686 GO:0009791 GO:0009845 GO:0009889 GO:0009891 GO:0009892 GO:0009893 GO:0009987 GO:0010035 GO:0010038 GO:0010371 GO:0010372 GO:0010467 GO:0010468 GO:0010494 GO:0010565 GO:0010605 GO:0010629 GO:0010817 GO:0012505 GO:0016020 GO:0016053 GO:0016070 GO:0016071 GO:0016101 GO:0016102 GO:0016114 GO:0016787 GO:0016788 GO:0019216 GO:0019222 GO:0019439 GO:0019747 GO:0019752 GO:0030054 GO:0030312 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031967 GO:0031975 GO:0032350 GO:0032352 GO:0032501 GO:0032502 GO:0032991 GO:0033554 GO:0034605 GO:0034641 GO:0034655 GO:0035770 GO:0036464 GO:0042221 GO:0042445 GO:0042446 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043436 GO:0043455 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044255 GO:0044260 GO:0044265 GO:0044270 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045828 GO:0045834 GO:0046394 GO:0046483 GO:0046686 GO:0046700 GO:0046885 GO:0046886 GO:0046889 GO:0046890 GO:0048518 GO:0048519 GO:0048522 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0055044 GO:0060255 GO:0062012 GO:0062013 GO:0065007 GO:0065008 GO:0071704 GO:0071944 GO:0080090 GO:0090304 GO:0090305 GO:0090351 GO:0097159 GO:1901360 GO:1901361 GO:1901363 GO:1901575 GO:1901576 GO:1990904
KEGG Pathways
Metabolic & Signaling
ko05169 ko05203 map05169 map05203
Pfam Domains
Protein Families
SNase TUDOR

Protein Analysis

729

Amino Acids

81.55

Weight (kDa)

6.35

Isoelectric Point (pI)

37.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SNase PF00565 41 - 154 8.2e-14 Staphylococcal nuclease homologue
SNase PF00565 200 - 319 8e-07 Staphylococcal nuclease homologue
SNase PF00565 382 - 479 1.1e-14 Staphylococcal nuclease homologue
TUDOR PF00567 491 - 616 7.9e-21 Tudor domain
SNase PF00565 677 - 724 9.8e-06 Staphylococcal nuclease homologue
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 3 cut(s) 43, 808, 2018
AccB1I GGYRCC 1 cut(s) 863
AccB7I CCANNNNNTGG 1 cut(s) 115
AccBSI CCGCTC 1 cut(s) 595
AccII CGCG 1 cut(s) 675
AciI CCGC 3 cut(s) 595, 825, 890
AclI AACGTT 1 cut(s) 831
AclWI GGATC 4 cut(s) 784, 1307, 1592, 1968
AcoI YGGCCR 2 cut(s) 555, 751
AcsI RAATTY 6 cut(s) 95, 206, 505, 769, 1428, 2099
AcuI CTGAAG 1 cut(s) 324
AcvI CACGTG 1 cut(s) 854
AfaI GTAC 4 cut(s) 989, 1759, 1818, 1901
AfiI CCNNNNNNNGG 6 cut(s) 115, 388, 479, 632, 1631, 1867
AflII CTTAAG 1 cut(s) 2122
AjnI CCWGG 2 cut(s) 1819, 2133
AjuI GAANNNNNNNTTGG 2 cut(s) 756, 788
Alw21I GWGCWC 2 cut(s) 71, 843
Alw26I GTCTC 2 cut(s) 982, 990
AlwI GGATC 4 cut(s) 784, 1307, 1592, 1968
AlwNI CAGNNNCTG 1 cut(s) 1423
Ama87I CYCGRG 1 cut(s) 129
AoxI GGCC 6 cut(s) 555, 751, 856, 1330, 1822, 1941
ApeKI GCWGC 5 cut(s) 179, 416, 923, 1131, 2054
ApoI RAATTY 6 cut(s) 95, 206, 505, 769, 1428, 2099
Asp700I GAANNNNTTC 1 cut(s) 1395
AspLEI GCGC 1 cut(s) 136
AspS9I GGNCC 4 cut(s) 1540, 1941, 2000, 2148
AsuHPI GGTGA 3 cut(s) 1168, 1646, 1895
AsuNHI GCTAGC 1 cut(s) 2078
AvaI CYCGRG 1 cut(s) 129
AvaII GGWCC 3 cut(s) 1540, 2000, 2148
BalI TGGCCA 1 cut(s) 753
BanI GGYRCC 1 cut(s) 863
BanII GRGCYC 1 cut(s) 843
BauI CACGAG 1 cut(s) 222
BbrPI CACGTG 1 cut(s) 854
BbsI GAAGAC 1 cut(s) 2103
Bbv12I GWGCWC 2 cut(s) 71, 843
BbvCI CCTCAGC 1 cut(s) 692
BbvI GCAGC 5 cut(s) 166, 403, 910, 1143, 2041
BccI CCATC 9 cut(s) 56, 136, 379, 612, 625, 743, 1322, 1439, 2063
BciT130I CCWGG 2 cut(s) 1821, 2135
BcoDI GTCTC 2 cut(s) 982, 990
BfaI CTAG 5 cut(s) 587, 612, 741, 1056, 2079
BfmI CTRYAG 2 cut(s) 417, 477
BfoI RGCGCY 1 cut(s) 137
BfrI CTTAAG 1 cut(s) 2122
BfuAI ACCTGC 3 cut(s) 43, 808, 2018
BglI GCCNNNNNGGC 1 cut(s) 1703
BisI GCNGC 5 cut(s) 180, 417, 924, 1132, 2055
BlpI GCTNAGC 1 cut(s) 837
BlsI GCNGC 5 cut(s) 181, 418, 925, 1133, 2056
BmcAI AGTACT 1 cut(s) 1901
Bme1390I CCNGG 2 cut(s) 1821, 2135
Bme18I GGWCC 3 cut(s) 1540, 2000, 2148
BmeT110I CYCGRG 1 cut(s) 129
BmgT120I GGNCC 4 cut(s) 1540, 1941, 2000, 2148
BmiI GGNNCC 3 cut(s) 865, 1676, 2001
BmrFI CCNGG 2 cut(s) 1821, 2135
BmsI GCATC 5 cut(s) 555, 796, 901, 1366, 2172
BmtI GCTAGC 1 cut(s) 2082
BpiI GAAGAC 1 cut(s) 2103
BplI GAGNNNNNCTC 2 cut(s) 1169, 1201
BpmI CTGGAG 1 cut(s) 353
Bpu10I CCTNAGC 1 cut(s) 692
Bpu1102I GCTNAGC 1 cut(s) 837
BpuEI CTTGAG 6 cut(s) 395, 446, 1707, 1746, 1924, 2042
BsaAI YACGTR 1 cut(s) 854
BsaBI GATNNNNATC 1 cut(s) 1380
BsaI GGTCTC 1 cut(s) 990
BsaJI CCNNGG 6 cut(s) 154, 681, 754, 859, 969, 1119
BsaXI ACNNNNNCTCC 2 cut(s) 1862, 1892
Bsc4I CCNNNNNNNGG 6 cut(s) 115, 388, 479, 632, 1631, 1867
Bse118I RCCGGY 2 cut(s) 658, 944
Bse1I ACTGG 1 cut(s) 1270
Bse3DI GCAATG 3 cut(s) 290, 1134, 1689
Bse8I GATNNNNATC 1 cut(s) 1380
BseBI CCWGG 2 cut(s) 1821, 2135
BseDI CCNNGG 6 cut(s) 154, 681, 754, 859, 969, 1119
BseGI GGATG 3 cut(s) 244, 754, 1195
BseJI GATNNNNATC 1 cut(s) 1380
BseLI CCNNNNNNNGG 6 cut(s) 115, 388, 479, 632, 1631, 1867
BseMI GCAATG 3 cut(s) 290, 1134, 1689
BseMII CTCAG 5 cut(s) 683, 828, 993, 1164, 1664
BseNI ACTGG 1 cut(s) 1270
BseRI GAGGAG 1 cut(s) 1708
BseXI GCAGC 5 cut(s) 166, 403, 910, 1143, 2041
BseYI CCCAGC 2 cut(s) 472, 1866
Bsh1236I CGCG 1 cut(s) 675
Bsh1285I CGRYCG 1 cut(s) 2155
BshFI GGCC 6 cut(s) 557, 753, 858, 1332, 1824, 1943
BshNI GGYRCC 1 cut(s) 863
BsiEI CGRYCG 1 cut(s) 2155
BsiHKAI GWGCWC 2 cut(s) 71, 843
BsiHKCI CYCGRG 1 cut(s) 129
BsiSI CCGG 2 cut(s) 659, 945
BslFI GGGAC 6 cut(s) 554, 1149, 1757, 1844, 2013, 2183
BslI CCNNNNNNNGG 6 cut(s) 115, 388, 479, 632, 1631, 1867
BsmAI GTCTC 2 cut(s) 982, 990
BsmFI GGGAC 6 cut(s) 554, 1149, 1757, 1844, 2013, 2183
BsmI GAATGC 2 cut(s) 615, 961
BsnI GGCC 6 cut(s) 557, 753, 858, 1332, 1824, 1943
Bso31I GGTCTC 1 cut(s) 990
BsoBI CYCGRG 1 cut(s) 129
Bsp1286I GDGCHC 2 cut(s) 71, 843
Bsp1407I TGTACA 1 cut(s) 987
Bsp143I GATC 6 cut(s) 776, 896, 1299, 1597, 1960, 2152
Bsp1720I GCTNAGC 1 cut(s) 837
Bsp19I CCATGG 1 cut(s) 154
BspACI CCGC 3 cut(s) 595, 825, 890
BspANI GGCC 6 cut(s) 557, 753, 858, 1332, 1824, 1943
BspCNI CTCAG 5 cut(s) 684, 829, 992, 1163, 1663
BspFNI CGCG 1 cut(s) 675
BspHI TCATGA 1 cut(s) 496
BspLI GGNNCC 3 cut(s) 865, 1676, 2001
BspMAI CTGCAG 1 cut(s) 421
BspMI ACCTGC 3 cut(s) 43, 808, 2018
BspOI GCTAGC 1 cut(s) 2082
BspPI GGATC 4 cut(s) 784, 1307, 1592, 1968
BspQI GCTCTTC 1 cut(s) 921
BspT107I GGYRCC 1 cut(s) 863
BspTI CTTAAG 1 cut(s) 2122
BspTNI GGTCTC 1 cut(s) 990
BsrBI CCGCTC 1 cut(s) 595
BsrDI GCAATG 3 cut(s) 290, 1134, 1689
BsrFI RCCGGY 2 cut(s) 658, 944
BsrGI TGTACA 1 cut(s) 987
BsrI ACTGG 1 cut(s) 1270
BssAI RCCGGY 2 cut(s) 658, 944
BssECI CCNNGG 6 cut(s) 154, 681, 754, 859, 969, 1119
BssMI GATC 6 cut(s) 776, 896, 1299, 1597, 1960, 2152
BssSI CACGAG 1 cut(s) 222
BssT1I CCWWGG 6 cut(s) 154, 681, 754, 859, 969, 1119
Bst2BI CACGAG 1 cut(s) 222
Bst2UI CCWGG 2 cut(s) 1821, 2135
Bst4CI ACNGT 4 cut(s) 868, 1679, 1816, 1935
Bst6I CTCTTC 4 cut(s) 573, 921, 1807, 2031
BstAFI CTTAAG 1 cut(s) 2122
BstAUI TGTACA 1 cut(s) 987
BstBAI YACGTR 1 cut(s) 854
BstC8I GCNNGC 6 cut(s) 660, 673, 1027, 1466, 1572, 2080
BstDEI CTNAG 7 cut(s) 432, 692, 837, 979, 1150, 1626, 1650
BstDSI CCRYGG 1 cut(s) 154
BstENI CCTNNNNNAGG 1 cut(s) 386
BstF5I GGATG 3 cut(s) 244, 754, 1195
BstFNI CGCG 1 cut(s) 675
BstH2I RGCGCY 1 cut(s) 137
BstHHI GCGC 1 cut(s) 136
BstKTI GATC 6 cut(s) 779, 899, 1302, 1600, 1963, 2155
BstMAI GTCTC 2 cut(s) 982, 990
BstMBI GATC 6 cut(s) 776, 896, 1299, 1597, 1960, 2152
BstMCI CGRYCG 1 cut(s) 2155
BstMWI GCNNNNNNNGC 5 cut(s) 668, 677, 920, 1045, 1703
BstNI CCWGG 2 cut(s) 1821, 2135
BstNSI RCATGY 2 cut(s) 248, 1131
BstSCI CCNGG 2 cut(s) 1819, 2133
BstSFI CTRYAG 2 cut(s) 417, 477
BstUI CGCG 1 cut(s) 675
BstV1I GCAGC 5 cut(s) 166, 403, 910, 1143, 2041
BstV2I GAAGAC 1 cut(s) 2103
BstX2I RGATCY 1 cut(s) 1960
BstYI RGATCY 1 cut(s) 1960
BsuRI GGCC 6 cut(s) 557, 753, 858, 1332, 1824, 1943
BtgI CCRYGG 1 cut(s) 154
BtsCI GGATG 3 cut(s) 244, 754, 1195
BtsI GCAGTG 2 cut(s) 1209, 1548
BtsIMutI CAGTG 3 cut(s) 1209, 1548, 1812
BveI ACCTGC 3 cut(s) 43, 808, 2018
Cac8I GCNNGC 6 cut(s) 660, 673, 1027, 1466, 1572, 2080
CaiI CAGNNNCTG 1 cut(s) 1423
CciI TCATGA 1 cut(s) 496
CfoI GCGC 1 cut(s) 136
Cfr10I RCCGGY 2 cut(s) 658, 944
Cfr13I GGNCC 4 cut(s) 1540, 1941, 2000, 2148
Csp6I GTAC 4 cut(s) 988, 1758, 1817, 1900
CviQI GTAC 4 cut(s) 988, 1758, 1817, 1900
DdeI CTNAG 7 cut(s) 432, 692, 837, 979, 1150, 1626, 1650
DpnI GATC 6 cut(s) 778, 898, 1301, 1599, 1962, 2154
DpnII GATC 6 cut(s) 776, 896, 1299, 1597, 1960, 2152
EaeI YGGCCR 2 cut(s) 555, 751
Eam1104I CTCTTC 4 cut(s) 573, 921, 1807, 2031
EarI CTCTTC 4 cut(s) 573, 921, 1807, 2031
Ecl136II GAGCTC 1 cut(s) 841
Eco130I CCWWGG 6 cut(s) 154, 681, 754, 859, 969, 1119
Eco24I GRGCYC 1 cut(s) 843
Eco31I GGTCTC 1 cut(s) 990
Eco47I GGWCC 3 cut(s) 1540, 2000, 2148
Eco53kI GAGCTC 1 cut(s) 841
Eco57I CTGAAG 1 cut(s) 324
Eco72I CACGTG 1 cut(s) 854
Eco88I CYCGRG 1 cut(s) 129
EcoICRI GAGCTC 1 cut(s) 841
EcoNI CCTNNNNNAGG 1 cut(s) 386
EcoO109I RGGNCCY 1 cut(s) 1941
EcoRII CCWGG 2 cut(s) 1819, 2133
EcoT14I CCWWGG 6 cut(s) 154, 681, 754, 859, 969, 1119
EcoT38I GRGCYC 1 cut(s) 843
ErhI CCWWGG 6 cut(s) 154, 681, 754, 859, 969, 1119
FaqI GGGAC 6 cut(s) 554, 1149, 1757, 1844, 2013, 2183
FauI CCCGC 1 cut(s) 818
Fnu4HI GCNGC 5 cut(s) 180, 417, 924, 1132, 2055
FokI GGATG 3 cut(s) 251, 761, 1202
FriOI GRGCYC 1 cut(s) 843
Fsp4HI GCNGC 5 cut(s) 180, 417, 924, 1132, 2055
FspBI CTAG 5 cut(s) 587, 612, 741, 1056, 2079
GlaI GCGC 1 cut(s) 135
GluI GCNGC 5 cut(s) 180, 417, 924, 1132, 2055
GsaI CCCAGC 2 cut(s) 476, 1870
GsuI CTGGAG 1 cut(s) 353
HaeII RGCGCY 1 cut(s) 137
HaeIII GGCC 6 cut(s) 557, 753, 858, 1332, 1824, 1943
HapII CCGG 2 cut(s) 659, 945
HhaI GCGC 1 cut(s) 136
Hin6I GCGC 1 cut(s) 134
HinP1I GCGC 1 cut(s) 134
HincII GTYRAC 2 cut(s) 265, 1258
HindII GTYRAC 2 cut(s) 265, 1258
HindIII AAGCTT 1 cut(s) 39
HpaII CCGG 2 cut(s) 659, 945
HphI GGTGA 3 cut(s) 1168, 1646, 1895
Hpy166II GTNNAC 5 cut(s) 82, 265, 584, 990, 1258
Hpy188I TCNGA 5 cut(s) 316, 627, 1189, 1401, 2116
Hpy8I GTNNAC 5 cut(s) 82, 265, 584, 990, 1258
Hpy99I CGWCG 2 cut(s) 1173, 2160
HpyAV CCTTC 6 cut(s) 299, 739, 1150, 1624, 1709, 1950
HpyCH4III ACNGT 4 cut(s) 868, 1679, 1816, 1935
HpyCH4IV ACGT 3 cut(s) 831, 853, 1851
HpyF10VI GCNNNNNNNGC 5 cut(s) 668, 677, 920, 1045, 1703
HpyF3I CTNAG 7 cut(s) 432, 692, 837, 979, 1150, 1626, 1650
HpySE526I ACGT 3 cut(s) 831, 853, 1851
HspAI GCGC 1 cut(s) 134
KroI GCCGGC 1 cut(s) 658
KroNI GCCGGC 1 cut(s) 660
Kzo9I GATC 6 cut(s) 776, 896, 1299, 1597, 1960, 2152
LguI GCTCTTC 1 cut(s) 921
LmnI GCTCC 3 cut(s) 49, 66, 334
Lsp1109I GCAGC 5 cut(s) 166, 403, 910, 1143, 2041
LweI GCATC 5 cut(s) 555, 796, 901, 1366, 2172
MaeI CTAG 5 cut(s) 587, 612, 741, 1056, 2079
MaeII ACGT 3 cut(s) 831, 853, 1851
MaeIII GTNAC 5 cut(s) 1172, 1492, 1603, 1634, 2014
MalI GATC 6 cut(s) 778, 898, 1301, 1599, 1962, 2154
MbiI CCGCTC 1 cut(s) 595
MboI GATC 6 cut(s) 776, 896, 1299, 1597, 1960, 2152
MfeI CAATTG 4 cut(s) 72, 728, 1197, 1311
MflI RGATCY 1 cut(s) 1960
MhlI GDGCHC 2 cut(s) 71, 843
MlsI TGGCCA 1 cut(s) 753
MluNI TGGCCA 1 cut(s) 753
MlyI GAGTC 3 cut(s) 609, 1301, 1793
MmeI TCCRAC 1 cut(s) 1303
Mox20I TGGCCA 1 cut(s) 753
MroNI GCCGGC 1 cut(s) 658
MroXI GAANNNNTTC 1 cut(s) 1395
MscI TGGCCA 1 cut(s) 753
MseI TTAA 5 cut(s) 1104, 1527, 1854, 1983, 2123
MslI CAYNNNNRTG 2 cut(s) 551, 906
Msp20I TGGCCA 1 cut(s) 753
MspCI CTTAAG 1 cut(s) 2122
MspI CCGG 2 cut(s) 659, 945
MspR9I CCNGG 2 cut(s) 1821, 2135
MunI CAATTG 4 cut(s) 72, 728, 1197, 1311
Mva1269I GAATGC 2 cut(s) 615, 961
MvaI CCWGG 2 cut(s) 1821, 2135
MvnI CGCG 1 cut(s) 675
MwoI GCNNNNNNNGC 5 cut(s) 668, 677, 920, 1045, 1703
NaeI GCCGGC 1 cut(s) 660
NcoI CCATGG 1 cut(s) 154
NdeII GATC 6 cut(s) 776, 896, 1299, 1597, 1960, 2152
NgoMIV GCCGGC 1 cut(s) 658
NheI GCTAGC 1 cut(s) 2078
NlaIV GGNNCC 3 cut(s) 865, 1676, 2001
NmuCI GTSAC 2 cut(s) 1172, 1634
NspI RCATGY 2 cut(s) 248, 1131
PaeR7I CTCGAG 1 cut(s) 129
PagI TCATGA 1 cut(s) 496
PciSI GCTCTTC 1 cut(s) 921
PctI GAATGC 2 cut(s) 615, 961
PdiI GCCGGC 1 cut(s) 660
PdmI GAANNNNTTC 1 cut(s) 1395
PfeI GAWTC 7 cut(s) 200, 218, 311, 563, 929, 1369, 1582
PflFI GACNNNGTC 1 cut(s) 1640
PflMI CCANNNNNTGG 1 cut(s) 115
PfoI TCCNGGA 1 cut(s) 2133
PkrI GCNGC 5 cut(s) 181, 418, 925, 1133, 2056
Ple19I CGATCG 1 cut(s) 2155
PleI GAGTC 3 cut(s) 608, 1300, 1793
PmaCI CACGTG 1 cut(s) 854
PmlI CACGTG 1 cut(s) 854
PpsI GAGTC 3 cut(s) 608, 1300, 1793
Ppu21I YACGTR 1 cut(s) 854
Psp124BI GAGCTC 1 cut(s) 843
Psp1406I AACGTT 1 cut(s) 831
Psp6I CCWGG 2 cut(s) 1819, 2133
PspCI CACGTG 1 cut(s) 854
PspFI CCCAGC 2 cut(s) 472, 1866
PspGI CCWGG 2 cut(s) 1819, 2133
PspN4I GGNNCC 3 cut(s) 865, 1676, 2001
PspPI GGNCC 4 cut(s) 1540, 1941, 2000, 2148
PspXI VCTCGAGB 1 cut(s) 129
PsrI GAACNNNNNNTAC 2 cut(s) 1724, 1756
PstI CTGCAG 1 cut(s) 421
PstNI CAGNNNCTG 1 cut(s) 1423
PsuI RGATCY 1 cut(s) 1960
PsyI GACNNNGTC 1 cut(s) 1640
PvuI CGATCG 1 cut(s) 2155
RsaI GTAC 4 cut(s) 989, 1759, 1818, 1901
RsaNI GTAC 4 cut(s) 988, 1758, 1817, 1900
RseI CAYNNNNRTG 2 cut(s) 551, 906
SacI GAGCTC 1 cut(s) 843
SapI GCTCTTC 1 cut(s) 921
SaqAI TTAA 5 cut(s) 1104, 1527, 1854, 1983, 2123
SatI GCNGC 5 cut(s) 180, 417, 924, 1132, 2055
Sau3AI GATC 6 cut(s) 776, 896, 1299, 1597, 1960, 2152
Sau96I GGNCC 4 cut(s) 1540, 1941, 2000, 2148
ScaI AGTACT 1 cut(s) 1901
SchI GAGTC 3 cut(s) 609, 1301, 1793
ScrFI CCNGG 2 cut(s) 1821, 2135
SduI GDGCHC 2 cut(s) 71, 843
SfaNI GCATC 5 cut(s) 555, 796, 901, 1366, 2172
SfcI CTRYAG 2 cut(s) 417, 477
Sfr274I CTCGAG 1 cut(s) 129
SinI GGWCC 3 cut(s) 1540, 2000, 2148
SlaI CTCGAG 1 cut(s) 129
SmiMI CAYNNNNRTG 2 cut(s) 551, 906
SmlI CTYRAG 8 cut(s) 129, 410, 425, 1722, 1761, 1903, 2021, 2122
SmoI CTYRAG 8 cut(s) 129, 410, 425, 1722, 1761, 1903, 2021, 2122
SsiI CCGC 3 cut(s) 595, 825, 890
SspMI CTAG 5 cut(s) 587, 612, 741, 1056, 2079
SstI GAGCTC 1 cut(s) 843
StyD4I CCNGG 2 cut(s) 1819, 2133
StyI CCWWGG 6 cut(s) 154, 681, 754, 859, 969, 1119
TaaI ACNGT 4 cut(s) 868, 1679, 1816, 1935
TaiI ACGT 3 cut(s) 834, 856, 1854
TaqI TCGA 5 cut(s) 130, 140, 880, 2065, 2155
TaqII GACCGA 1 cut(s) 2165
TatI WGTACW 2 cut(s) 987, 1899
TfiI GAWTC 7 cut(s) 200, 218, 311, 563, 929, 1369, 1582
Tru1I TTAA 5 cut(s) 1104, 1527, 1854, 1983, 2123
Tru9I TTAA 5 cut(s) 1104, 1527, 1854, 1983, 2123
TscAI CASTG 3 cut(s) 1209, 1555, 1819
TseFI GTSAC 2 cut(s) 1172, 1634
TseI GCWGC 5 cut(s) 179, 416, 923, 1131, 2054
Tsp45I GTSAC 2 cut(s) 1172, 1634
TspDTI ATGAA 7 cut(s) 485, 666, 777, 782, 1206, 1749, 2049
TspGWI ACGGA 1 cut(s) 1338
TspRI CASTG 3 cut(s) 1209, 1555, 1819
Tth111I GACNNNGTC 1 cut(s) 1640
Van91I CCANNNNNTGG 1 cut(s) 115
Vha464I CTTAAG 1 cut(s) 2122
VpaK11BI GGWCC 3 cut(s) 1540, 2000, 2148
XagI CCTNNNNNAGG 1 cut(s) 386
XapI RAATTY 6 cut(s) 95, 206, 505, 769, 1428, 2099
XceI RCATGY 2 cut(s) 248, 1131
XhoI CTCGAG 1 cut(s) 129
XmnI GAANNNNTTC 1 cut(s) 1395
XspI CTAG 5 cut(s) 587, 612, 741, 1056, 2079
ZrmI AGTACT 1 cut(s) 1901
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.