AT5G12430

DnaJ molecular chaperone homology domain

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Reverse (-)
4027974 .. 4034682
6709 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G12430.1

Sequence Viewer

Length: 3498 bp
ATGAGCAAGTTCGGCGAATTGAATCCCGCCTTCTCTGGTGCGGGTCGAAGCAGCAGCAATAATAACCCTGACGCGAGTTTCAATTCTGCGCCTTTTCCACGGTCGTCTTCTGGTCTCTCTAAGCCTAGATTCTCTAAGGTGAGAAGGCAAGTAAAGTCTCAGAATTTGAAGCCCTCGGGGACTTCTGATTCCTTACCGGGTCAGAGTTTTAACCCGTTTCACTTCCGTGGATCTTTTTCCGGTGATCCAACTCCTAGTGAGATCGGATTTGGACGGAGCAGCAATGAGGGTTTTGTATTTGGTGGATCATCTCATGTTGATAAATTGCAATCTGATGAAAAAATTGGGATAAGAGTTATGGAAGAGATGGAAAGGTTGAAAATTGAGAGTGAAGGAAAGGCTTCAAGGCTTCCTGAAGATATGCAGAATTTGAATTCTAGCTTCAGTTTTGGTGTAAAGAAGGGAAGCAATAACTCCGTTTTTGCAACTGTGGAACTTCCAACTCTGTTAAGTAATAAACTGATTATTGATTCATCTTCGAGGAGTACAGGACACGTGATCCAGGAAAGTATGGAGAAGTTGAATATTTCGGAGAGGGGGACTGATCAGAAACAGAATAATAACGTCAAATCCAAAGTGTCTATGGATTATGTTGGGGAGAAGATACTATCTGATGATTTGAGTAGAAAGTTAAGTGTTGGAAGTATGACTACTGATGGGAATCATTCTGGAGATTCATTTCAGGGAAGTGTAAATGAGAAGAAAGTCCATGATTTTAACAGTTCATGTCCGATGAACTATAGTTTTGTAGGTACAGAGCCAAGTCAAAATCTGAATGCTAGAAATGTCCATGATGTGTCCTCTACAGTAAATACTTCAGATTTTAATTTTGTGAGTAATCAAGACAGTGTGAAGACAGGTTTTATGGAATTCAAGACCCCTAATTCGAAAGTAAACCCATTTTCTAGTTTGGACCAGAAATTGGGGTTCAATGCGAAGAAGGACAGTGTTGGGGCTACTACGAGAGCGAGAAGGAAAGGGGGTAAGCAGCCTGTGAAAGTGCAGCTAAATATTGGACGTGAGTTTGCTTTTGCAGAAAGTGCTATTCCAAATGGAAGCAATGAGGCTCCTGAGGCGTATTCACCGATGGATATTTCTCCATATGAGGAGACAGAAGTTTGTAGAGAATTTTCTGCTGATATACCACCTACTGCTCCAAATTATTTGTTTGATGCAGAGCTAGTTGCTGCAACCGAGAGGATGGAAATTAATGAGGGGGATGAAGTTAATAACTATCAAGCTGAAGAATTTAATACTGGGAATTGTGCTGATCATGAAGACCTTGCTGGAGATTCTATATCTGGAGCTGAAACTGAAAGTTTTAAATCAGCAGCCGAAGAGATGGAAACTAGTAGTGAAACTTTTGCTACAGCTTCAGAAAGTGAGGTTACTTCACGATATAAGTCTGATAGGAAAGAAAATGATGACCATTCCCTTTCTAATACAGATGCTGCTAGCTCCAGCTTTACCTTTTCTGCTTCATCATTTTCGGGAGTGCAGGGGCCACTATCAACTTCGAAGCGTATCAATAGGAAGAAAAACCCGATTAAACTTGGGCAGGATCCATATATCCTAATTCCAAATGCTACACTACCATTAAAATCTTCACAACATTCTCCGTTAACTGGTGTGCAGTCACATTTTTCCACAGGGAAACCCAGTGAAAGGGATCCGCTTACTCGTCTACACAAGCCTATTAATAATTCTGTGATGGAAAAAGCACGAATCGAAAAAGATGTGTCTAATGCAGCGCAAGAAGCATGTGAAAAGTGGCGATTAAGAGGAAACAATGCTTATAAAATTGGAGATCTTTCCAGAGCTGAGGAATCTTACACTCAAGGGATTGATTCAGTGCCTAGAATCGAAACTTCTAGAAACTGTCTCAGGGCATTAATGCTTTGCTATAGCAACCGTGCTGCAACACGCATGGCCCTTGGAAGAATGAGAGAAGCAATAGCAGATTGTACGATGGCTTCTTCAATAGACTCCAACTTCCTTAAAGTTCAAGTCAGAGCTGCAAATTGTTACCTTTCACTTGGGGAGATTGAAGATGCATCCAGGTATTTCAAAAAATGCTTGCAATCAGGAAGTGACATCTGTGTGGACCGTAAAATTATTGTCGAGGCTTCTGAAGGTCTACAAAAGGCGCAGAGAGTTTCTGAATGCATGCATGAAGCTGGCCGTCGTTTGCAACTTAGAACATTAACTGATGCTGAAAAAGCTTTGGAAATATTGGAAGATTCTCTTTTGATAAGTACATACTCTGAAAAGTTACTCACTATGAAGGGAGAGGCGCTCTTGATGCTTGAGAAGTATGACGCAGCAATAAAGCTTTGTGAGCAGACAGTTGATTTGGCTGGAAAGAATTCTCCTCCAGATTCTCATGACACTCCCAAGGACATAAACTTTAGAATTTGGCAGTGTCATCTCATGCTTAAATCAAGTTTCTATATGGGAAAGCTTGAGGAGGCGATTGCGTCTCTAGAGAAGCAAGAACAACTACTATCTGCTACAAAAAGAGAAGGAAACAAAACTCTTGAATCCTCCATTCCGTTGGCTGCTACTATACGTGAGTTGTTGCGCCTTAAGGCGGCAGGGAATGAAGCCTTTCAGTCTGGACGACACACTGAAGCAGTTGAACATTACACAGCAGCCCTGGCTTGCAATGTGGAATCACGTCCTTTTACAGCTGTGTGTTTCTGTAATCGTGCAGCTGCATATAAGGCTCTTGGTCAATTTTCTGACGCTATTGCAGACTGCAGCCTTGCTATTGCTCTTGACCAAAATTACTCAAAGGCTATTTCTAGACGGGCCACGTTGTTCGAGATGATTAGGGATTATGGGCAGGCAGCAAGTGATATGGAGAGATATGTTAATATTCTAACCAAGCAAATGGAAGAGAAGACCTCTGGAACCCTTGACAGATCTACTAGTATGTCCAATGACATAAGACAAGCTCGTATACGACTTTCTGAACTGGAAGAGAAATCAAGGAAAGAAAATTCATTGGATATGTACCTCGTCTTGGGTGTTGTACCATCATGCTCGGCTTCAGATATCAGAAAGGCATATAGGAAGGCCGCACTCAAACATCATCCCGACAAGGCTGGTCAGTCTTTGACAAGAAACGAGACTAAAGATGAGAGGTTATGGAAGGAGATAGGGGAAGAAGTGCGCAAAGATACCGATAAATTATTTAAAATGATTGGGGAAGCGTATGCTGTGCTTTCAGACCCTGCAAAGCGTTCTCAGTATGATCTTGAAGAAGAGATGCATAATTCGCAAAAGAGACGTGATGGAAGCAGCACATCTGGAGCAGACACAGATAATTATCCTTTCCACAGCAGTAGAAGAAACTGGAGGGAAGGATGGAGTTCACGTAAAGACCCATCAACTCCGAGGTGGTTTGATCCAAACCGATCAAACAGATACCCGTAA

Protein Analysis

1165

Amino Acids

129.18

Weight (kDa)

6.37

Isoelectric Point (pI)

48.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_1 PF00515 917 - 950 2.9e-06 Tetratricopeptide repeat
DnaJ PF00226 1024 - 1106 1.4e-15 DnaJ domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1857
Acc16I TGCGCA 1 cut(s) 3236
AccB7I CCANNNNNTGG 1 cut(s) 982
AccI GTMKAC 3 cut(s) 1744, 2197, 3022
AccII CGCG 1 cut(s) 74
AciI CCGC 5 cut(s) 27, 41, 1733, 2651, 3141
AclWI GGATC 9 cut(s) 238, 239, 313, 553, 1616, 1629, 1724, 1737, 3464
AcoI YGGCCR 1 cut(s) 2239
AcsI RAATTY 9 cut(s) 163, 427, 433, 929, 1187, 1307, 2425, 2472, 3061
AcuI CTGAAG 8 cut(s) 427, 435, 861, 1323, 1419, 2211, 2709, 3096
AcvI CACGTG 1 cut(s) 556
AfaI GTAC 6 cut(s) 547, 814, 2026, 2317, 3077, 3096
AfiI CCNNNNNNNGG 5 cut(s) 982, 1685, 1725, 2650, 3085
AflII CTTAAG 1 cut(s) 2645
AflIII ACRYGT 1 cut(s) 553
AhlI ACTAGT 2 cut(s) 1409, 2990
AjiI CACGTC 3 cut(s) 1079, 2738, 3353
AjnI CCWGG 3 cut(s) 561, 2117, 2715
AleI CACNNNNGTG 1 cut(s) 225
Alw26I GTCTC 7 cut(s) 119, 162, 1163, 1946, 2544, 3185, 3343
AlwI GGATC 9 cut(s) 238, 239, 313, 553, 1616, 1629, 1724, 1737, 3464
AlwNI CAGNNNCTG 2 cut(s) 1511, 3296
Ama87I CYCGRG 1 cut(s) 175
AoxI GGCC 5 cut(s) 1562, 1989, 2239, 2871, 3138
ApoI RAATTY 9 cut(s) 163, 427, 433, 929, 1187, 1307, 2425, 2472, 3061
ArsI GACNNNNNNTTYG 4 cut(s) 928, 960, 2395, 2427
AseI ATTAAT 3 cut(s) 1269, 1758, 1952
Asp700I GAANNNNTTC 3 cut(s) 400, 2425, 2667
AspLEI GCGC 6 cut(s) 91, 1813, 2209, 2356, 2643, 3237
AspS9I GGNCC 5 cut(s) 973, 1562, 1990, 2164, 2871
AsuC2I CCSGG 1 cut(s) 198
AsuHPI GGTGA 3 cut(s) 151, 254, 1134
AsuII TTCGAA 2 cut(s) 947, 1577
AsuNHI GCTAGC 1 cut(s) 1514
AvaI CYCGRG 1 cut(s) 175
AvaII GGWCC 2 cut(s) 973, 2164
AxyI CCTNAGG 1 cut(s) 1131
BamHI GGATCC 2 cut(s) 1621, 1729
BarI GAAGNNNNNNTAC 4 cut(s) 694, 726, 2017, 2049
BbrPI CACGTG 1 cut(s) 556
BbsI GAAGAC 4 cut(s) 99, 920, 1344, 2969
BbvCI CCTCAGC 1 cut(s) 1881
BceAI ACGGC 1 cut(s) 2226
BciT130I CCWGG 3 cut(s) 563, 2119, 2717
BclI TGATCA 2 cut(s) 604, 1330
BcnI CCSGG 1 cut(s) 198
BcoDI GTCTC 7 cut(s) 119, 162, 1163, 1946, 2544, 3185, 3343
BcuI ACTAGT 2 cut(s) 1409, 2990
BfmI CTRYAG 5 cut(s) 799, 864, 1428, 1963, 2818
BfoI RGCGCY 1 cut(s) 2357
BfrI CTTAAG 1 cut(s) 2645
BglII AGATCT 2 cut(s) 1867, 2984
Bme1390I CCNGG 4 cut(s) 198, 563, 2119, 2717
Bme18I GGWCC 2 cut(s) 973, 2164
BmeT110I CYCGRG 1 cut(s) 175
BmgBI CACGTC 3 cut(s) 1079, 2738, 3353
BmgT120I GGNCC 5 cut(s) 973, 1562, 1990, 2164, 2871
BmiI GGNNCC 5 cut(s) 1128, 1563, 1623, 1731, 2974
BmrFI CCNGG 4 cut(s) 198, 563, 2119, 2717
BmrI ACTGGG 2 cut(s) 1326, 1713
BmsI GCATC 7 cut(s) 1222, 1498, 2101, 2123, 2260, 2352, 3321
BmtI GCTAGC 1 cut(s) 1518
BmuI ACTGGG 2 cut(s) 1326, 1713
BpiI GAAGAC 4 cut(s) 99, 920, 1344, 2969
BplI GAGNNNNNCTC 4 cut(s) 2340, 2372, 2951, 2983
BpmI CTGGAG 7 cut(s) 750, 1368, 1383, 1504, 2418, 3393, 3439
Bpu10I CCTNAGC 1 cut(s) 1881
Bpu14I TTCGAA 2 cut(s) 947, 1577
BpuEI CTTGAG 3 cut(s) 1881, 2387, 2543
BpuMI CCSGG 1 cut(s) 198
BsaAI YACGTR 3 cut(s) 556, 2630, 3440
BsaBI GATNNNNATC 2 cut(s) 720, 3390
BsaI GGTCTC 1 cut(s) 119
BsaJI CCNNGG 7 cut(s) 98, 174, 226, 1993, 2454, 2715, 3458
BsaWI WCCGGW 1 cut(s) 239
BsaXI ACNNNNNCTCC 2 cut(s) 3424, 3454
Bsc4I CCNNNNNNNGG 5 cut(s) 982, 1685, 1725, 2650, 3085
Bse1I ACTGG 5 cut(s) 1321, 1690, 1719, 3042, 3422
Bse21I CCTNAGG 1 cut(s) 1131
Bse3DI GCAATG 3 cut(s) 289, 1126, 2731
Bse8I GATNNNNATC 2 cut(s) 720, 3390
BseBI CCWGG 3 cut(s) 563, 2119, 2717
BseDI CCNNGG 7 cut(s) 98, 174, 226, 1993, 2454, 2715, 3458
BseGI GGATG 5 cut(s) 1266, 1285, 2114, 3154, 3434
BseJI GATNNNNATC 2 cut(s) 720, 3390
BseLI CCNNNNNNNGG 5 cut(s) 982, 1685, 1725, 2650, 3085
BseMI GCAATG 3 cut(s) 289, 1126, 2731
BseMII CTCAG 5 cut(s) 173, 1122, 1872, 1957, 3323
BseNI ACTGG 5 cut(s) 1321, 1690, 1719, 3042, 3422
BseRI GAGGAG 4 cut(s) 556, 1181, 2421, 2540
BsgI GTGCAG 4 cut(s) 1082, 1577, 1712, 2790
Bsh1236I CGCG 1 cut(s) 74
Bsh1285I CGRYCG 1 cut(s) 104
BshFI GGCC 5 cut(s) 1564, 1991, 2241, 2873, 3140
BsiEI CGRYCG 1 cut(s) 104
BsiHKCI CYCGRG 1 cut(s) 175
BsiSI CCGG 2 cut(s) 197, 240
BslFI GGGAC 2 cut(s) 193, 613
BslI CCNNNNNNNGG 5 cut(s) 982, 1685, 1725, 2650, 3085
BsmAI GTCTC 7 cut(s) 119, 162, 1163, 1946, 2544, 3185, 3343
BsmBI CGTCTC 2 cut(s) 2544, 3343
BsmFI GGGAC 2 cut(s) 193, 613
BsmI GAATGC 2 cut(s) 841, 2228
BsnI GGCC 5 cut(s) 1564, 1991, 2241, 2873, 3140
Bso31I GGTCTC 1 cut(s) 119
BsoBI CYCGRG 1 cut(s) 175
Bsp119I TTCGAA 2 cut(s) 947, 1577
BspACI CCGC 5 cut(s) 27, 41, 1733, 2651, 3141
BspANI GGCC 5 cut(s) 1564, 1991, 2241, 2873, 3140
BspCNI CTCAG 5 cut(s) 172, 1123, 1873, 1956, 3322
BspFNI CGCG 1 cut(s) 74
BspHI TCATGA 2 cut(s) 1333, 2443
BspLI GGNNCC 5 cut(s) 1128, 1563, 1623, 1731, 2974
BspMAI CTGCAG 1 cut(s) 2822
BspOI GCTAGC 1 cut(s) 1518
BspPI GGATC 9 cut(s) 238, 239, 313, 553, 1616, 1629, 1724, 1737, 3464
BspT104I TTCGAA 2 cut(s) 947, 1577
BspTI CTTAAG 1 cut(s) 2645
BspTNI GGTCTC 1 cut(s) 119
BsrDI GCAATG 3 cut(s) 289, 1126, 2731
BsrI ACTGG 5 cut(s) 1321, 1690, 1719, 3042, 3422
BssECI CCNNGG 7 cut(s) 98, 174, 226, 1993, 2454, 2715, 3458
BssNAI GTATAC 1 cut(s) 3023
BssT1I CCWWGG 2 cut(s) 1993, 2454
Bst1107I GTATAC 1 cut(s) 3023
Bst2UI CCWGG 3 cut(s) 563, 2119, 2717
Bst6I CTCTTC 5 cut(s) 357, 1392, 2952, 3036, 3321
BstAFI CTTAAG 1 cut(s) 2645
BstAPI GCANNNNNTGC 1 cut(s) 1100
BstBAI YACGTR 3 cut(s) 556, 2630, 3440
BstBI TTCGAA 2 cut(s) 947, 1577
BstC8I GCNNGC 6 cut(s) 1516, 2138, 2228, 2239, 2722, 2907
BstDEI CTNAG 8 cut(s) 120, 135, 159, 1131, 1881, 1943, 2255, 3309
BstDSI CCRYGG 2 cut(s) 98, 226
BstF5I GGATG 5 cut(s) 1266, 1285, 2114, 3154, 3434
BstFNI CGCG 1 cut(s) 74
BstH2I RGCGCY 1 cut(s) 2357
BstHHI GCGC 6 cut(s) 91, 1813, 2209, 2356, 2643, 3237
BstMAI GTCTC 7 cut(s) 119, 162, 1163, 1946, 2544, 3185, 3343
BstMCI CGRYCG 1 cut(s) 104
BstNI CCWGG 3 cut(s) 563, 2119, 2717
BstNSI RCATGY 2 cut(s) 1824, 2230
BstSCI CCNGG 4 cut(s) 196, 561, 2117, 2715
BstSFI CTRYAG 5 cut(s) 799, 864, 1428, 1963, 2818
BstUI CGCG 1 cut(s) 74
BstV2I GAAGAC 4 cut(s) 99, 920, 1344, 2969
BstX2I RGATCY 5 cut(s) 230, 1621, 1729, 1867, 2984
BstXI CCANNNNNNTGG 2 cut(s) 2614, 2953
BstYI RGATCY 5 cut(s) 230, 1621, 1729, 1867, 2984
BstZ17I GTATAC 1 cut(s) 3023
Bsu36I CCTNAGG 1 cut(s) 1131
BsuRI GGCC 5 cut(s) 1564, 1991, 2241, 2873, 3140
BtgI CCRYGG 2 cut(s) 98, 226
BtrI CACGTC 3 cut(s) 1079, 2738, 3353
BtsCI GGATG 5 cut(s) 1266, 1285, 2114, 3154, 3434
BtsI GCAGTG 1 cut(s) 2486
BtsIMutI CAGTG 6 cut(s) 913, 1012, 1726, 1917, 2486, 2685
Cac8I GCNNGC 6 cut(s) 1516, 2138, 2228, 2239, 2722, 2907
CaiI CAGNNNCTG 2 cut(s) 1511, 3296
CciI TCATGA 2 cut(s) 1333, 2443
CfoI GCGC 6 cut(s) 91, 1813, 2209, 2356, 2643, 3237
Cfr13I GGNCC 5 cut(s) 973, 1562, 1990, 2164, 2871
CseI GACGC 4 cut(s) 80, 2387, 2526, 2813
Csp6I GTAC 6 cut(s) 546, 813, 2025, 2316, 3076, 3095
CviQI GTAC 6 cut(s) 546, 813, 2025, 2316, 3076, 3095
DdeI CTNAG 8 cut(s) 120, 135, 159, 1131, 1881, 1943, 2255, 3309
DraI TTTAAA 2 cut(s) 1384, 3259
EaeI YGGCCR 1 cut(s) 2239
Eam1104I CTCTTC 5 cut(s) 357, 1392, 2952, 3036, 3321
EarI CTCTTC 5 cut(s) 357, 1392, 2952, 3036, 3321
Eco130I CCWWGG 2 cut(s) 1993, 2454
Eco31I GGTCTC 1 cut(s) 119
Eco32I GATATC 1 cut(s) 3118
Eco47I GGWCC 2 cut(s) 973, 2164
Eco57I CTGAAG 8 cut(s) 427, 435, 861, 1323, 1419, 2211, 2709, 3096
Eco72I CACGTG 1 cut(s) 556
Eco81I CCTNAGG 1 cut(s) 1131
Eco88I CYCGRG 1 cut(s) 175
EcoRI GAATTC 3 cut(s) 433, 929, 2425
EcoRII CCWGG 3 cut(s) 561, 2117, 2715
EcoRV GATATC 1 cut(s) 3118
EcoT14I CCWWGG 2 cut(s) 1993, 2454
EcoT22I ATGCAT 4 cut(s) 2116, 2228, 2232, 3336
ErhI CCWWGG 2 cut(s) 1993, 2454
Esp3I CGTCTC 2 cut(s) 2544, 3343
FalI AAGNNNNNCTT 2 cut(s) 2289, 2321
FaqI GGGAC 2 cut(s) 193, 613
FauI CCCGC 2 cut(s) 34, 34
FauNDI CATATG 1 cut(s) 1162
FbaI TGATCA 2 cut(s) 604, 1330
FblI GTMKAC 3 cut(s) 1744, 2197, 3022
FokI GGATG 5 cut(s) 1273, 1292, 2101, 3141, 3441
FspI TGCGCA 1 cut(s) 3236
GlaI GCGC 6 cut(s) 90, 1812, 2208, 2355, 2642, 3236
GsuI CTGGAG 7 cut(s) 750, 1368, 1383, 1504, 2418, 3393, 3439
HaeII RGCGCY 1 cut(s) 2357
HaeIII GGCC 5 cut(s) 1564, 1991, 2241, 2873, 3140
HapII CCGG 2 cut(s) 197, 240
HgaI GACGC 4 cut(s) 80, 2387, 2526, 2813
HhaI GCGC 6 cut(s) 91, 1813, 2209, 2356, 2643, 3237
Hin6I GCGC 6 cut(s) 89, 1811, 2207, 2354, 2641, 3235
HinP1I GCGC 6 cut(s) 89, 1811, 2207, 2354, 2641, 3235
HincII GTYRAC 1 cut(s) 1683
HindII GTYRAC 1 cut(s) 1683
HindIII AAGCTT 3 cut(s) 2280, 2390, 2519
HpaI GTTAAC 1 cut(s) 1683
HpaII CCGG 2 cut(s) 197, 240
HphI GGTGA 3 cut(s) 151, 254, 1134
Hpy166II GTNNAC 7 cut(s) 955, 1683, 1745, 2164, 2198, 3023, 3437
Hpy8I GTNNAC 7 cut(s) 955, 1683, 1745, 2164, 2198, 3023, 3437
Hpy99I CGWCG 1 cut(s) 2247
HpyCH4IV ACGT 8 cut(s) 555, 624, 1078, 2629, 2737, 2876, 3352, 3439
HpyF3I CTNAG 8 cut(s) 120, 135, 159, 1131, 1881, 1943, 2255, 3309
HpySE526I ACGT 8 cut(s) 555, 624, 1078, 2629, 2737, 2876, 3352, 3439
HspAI GCGC 6 cut(s) 89, 1811, 2207, 2354, 2641, 3235
Ksp22I TGATCA 2 cut(s) 604, 1330
KspAI GTTAAC 1 cut(s) 1683
LmnI GCTCC 6 cut(s) 276, 1132, 1219, 1364, 1523, 3374
LweI GCATC 7 cut(s) 1222, 1498, 2101, 2123, 2260, 2352, 3321
MaeII ACGT 8 cut(s) 555, 624, 1078, 2629, 2737, 2876, 3352, 3439
MaeIII GTNAC 5 cut(s) 1447, 1695, 2084, 2150, 2331
MflI RGATCY 5 cut(s) 230, 1621, 1729, 1867, 2984
MlyI GAGTC 1 cut(s) 2039
MmeI TCCRAC 4 cut(s) 272, 524, 679, 2073
Mph1103I ATGCAT 4 cut(s) 2116, 2228, 2232, 3336
MroXI GAANNNNTTC 3 cut(s) 400, 2425, 2667
MslI CAYNNNNRTG 2 cut(s) 225, 2159
MspA1I CMGCKG 2 cut(s) 2750, 2774
MspCI CTTAAG 1 cut(s) 2645
MspI CCGG 2 cut(s) 197, 240
MspR9I CCNGG 4 cut(s) 198, 563, 2119, 2717
Mva1269I GAATGC 2 cut(s) 841, 2228
MvaI CCWGG 3 cut(s) 563, 2119, 2717
MvnI CGCG 1 cut(s) 74
NciI CCSGG 1 cut(s) 198
NdeI CATATG 1 cut(s) 1162
NheI GCTAGC 1 cut(s) 1514
NlaIV GGNNCC 5 cut(s) 1128, 1563, 1623, 1731, 2974
NmeAIII GCCGAG 1 cut(s) 3086
NmuCI GTSAC 2 cut(s) 1695, 2150
NsbI TGCGCA 1 cut(s) 3236
NsiI ATGCAT 4 cut(s) 2116, 2228, 2232, 3336
NspI RCATGY 2 cut(s) 1824, 2230
NspV TTCGAA 2 cut(s) 947, 1577
OliI CACNNNNGTG 1 cut(s) 225
PaeI GCATGC 1 cut(s) 2230
PagI TCATGA 2 cut(s) 1333, 2443
PctI GAATGC 2 cut(s) 841, 2228
PdmI GAANNNNTTC 3 cut(s) 400, 2425, 2667
PflMI CCANNNNNTGG 1 cut(s) 982
PfoI TCCNGGA 1 cut(s) 561
PleI GAGTC 1 cut(s) 2039
PmaCI CACGTG 1 cut(s) 556
PmlI CACGTG 1 cut(s) 556
PpsI GAGTC 1 cut(s) 2039
Ppu21I YACGTR 3 cut(s) 556, 2630, 3440
PshBI ATTAAT 3 cut(s) 1269, 1758, 1952
PsiI TTATAA 1 cut(s) 1857
Psp6I CCWGG 3 cut(s) 561, 2117, 2715
PspCI CACGTG 1 cut(s) 556
PspGI CCWGG 3 cut(s) 561, 2117, 2715
PspN4I GGNNCC 5 cut(s) 1128, 1563, 1623, 1731, 2974
PspPI GGNCC 5 cut(s) 973, 1562, 1990, 2164, 2871
PstI CTGCAG 1 cut(s) 2822
PstNI CAGNNNCTG 2 cut(s) 1511, 3296
PsuI RGATCY 5 cut(s) 230, 1621, 1729, 1867, 2984
PvuII CAGCTG 2 cut(s) 2750, 2774
RsaI GTAC 6 cut(s) 547, 814, 2026, 2317, 3077, 3096
RsaNI GTAC 6 cut(s) 546, 813, 2025, 2316, 3076, 3095
RseI CAYNNNNRTG 2 cut(s) 225, 2159
Sau96I GGNCC 5 cut(s) 973, 1562, 1990, 2164, 2871
SchI GAGTC 1 cut(s) 2039
ScrFI CCNGG 4 cut(s) 198, 563, 2119, 2717
SfaNI GCATC 7 cut(s) 1222, 1498, 2101, 2123, 2260, 2352, 3321
SfcI CTRYAG 5 cut(s) 799, 864, 1428, 1963, 2818
SfuI TTCGAA 2 cut(s) 947, 1577
SinI GGWCC 2 cut(s) 973, 2164
SmiMI CAYNNNNRTG 2 cut(s) 225, 2159
SmlI CTYRAG 4 cut(s) 1896, 2366, 2522, 2645
SmoI CTYRAG 4 cut(s) 1896, 2366, 2522, 2645
SpeI ACTAGT 2 cut(s) 1409, 2990
SphI GCATGC 1 cut(s) 2230
SsiI CCGC 5 cut(s) 27, 41, 1733, 2651, 3141
SspI AATATT 4 cut(s) 586, 1072, 2292, 2938
StyD4I CCNGG 4 cut(s) 196, 561, 2117, 2715
StyI CCWWGG 2 cut(s) 1993, 2454
TaiI ACGT 8 cut(s) 558, 627, 1081, 2632, 2740, 2879, 3355, 3442
TaqI TCGA 8 cut(s) 46, 539, 947, 1577, 1788, 1923, 2181, 2883
TatI WGTACW 2 cut(s) 545, 2315
TauI GCSGC 2 cut(s) 2654, 3143
TscAI CASTG 6 cut(s) 913, 1012, 1726, 1917, 2486, 2692
TseFI GTSAC 2 cut(s) 1695, 2150
Tsp45I GTSAC 2 cut(s) 1695, 2150
TspGWI ACGGA 5 cut(s) 215, 289, 466, 1668, 2601
TspRI CASTG 6 cut(s) 913, 1012, 1726, 1917, 2486, 2692
Van91I CCANNNNNTGG 1 cut(s) 982
Vha464I CTTAAG 1 cut(s) 2645
VpaK11BI GGWCC 2 cut(s) 973, 2164
VspI ATTAAT 3 cut(s) 1269, 1758, 1952
XapI RAATTY 9 cut(s) 163, 427, 433, 929, 1187, 1307, 2425, 2472, 3061
XbaI TCTAGA 3 cut(s) 1931, 2542, 2864
XceI RCATGY 2 cut(s) 1824, 2230
XcmI CCANNNNNNNNNTGG 1 cut(s) 640
XmiI GTMKAC 3 cut(s) 1744, 2197, 3022
XmnI GAANNNNTTC 3 cut(s) 400, 2425, 2667
Zsp2I ATGCAT 4 cut(s) 2116, 2228, 2232, 3336
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.