Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr3

Orthogroup ID

OG0004583

Physical Location & Seq

Genomic Coordinates Forward (+)

13626386 .. 13636586

Gene Structure 10201 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom03g12830.8

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2688 bp

ATGAATGAGAAGAGGGATGAGTTTTACTTTACAAGCAAGCACGATGGTTTAGGCACACACTCTGTAGAATTTAAAACACCACACCCTAAAGCAAACGTGTTTACTGGCGTAAACAAGAAAGTGGAATTCAACGCGAAGAGGCAGTCATTCAAGGAAACAAAAATGAAAAAAACAGCTGCAAAATTAAGGCGTTCTACCTCAGCCCATCTGGGACCTGGGCATGATTTTGTTTCAAGAGAAGGCAGTTCTGAAGAAAACATTGAGGCCTCTGAATCCTATTCGCCAATGGAGGTTTCTCCGTATCAAGAAACATTGGCTGATAACCAGTGTTCAAAAGAGAATTCTGCTGCATCTGAACATTTGGATATAAATGAAGCTGATGCAACAACCAGAGAAGCAAAAGGGGACACTTATGAGTACCGTCACGATGGTAGTGTTGGTACCGAAGGAACTCTTGAAGGATCTATGTCCGAGGTTGAAACTGAAAGCTTTAAGTCTGCAGCTGAGGAGGTAGACTTTAATAGCGATAACTCTCATACTTCAGCAGAAACTGAAGCCAGTTCGAGCTCAAACATGGAGAGCCATGATACTGATGGAAGGCTACACTTTGGCTTCCCTTCAAGTTCAGAAAATAGAAGTGGATCTAACTTCACCTTTGCTGCCTCTTCCGATGCTCAAAGTCAAGTATCTGCATCAAAACGCCTCCAGAAAAAGAAAAGTCTGGTAAAGGCTGGTCAAGATACCAATACTATAGTTCCAAATGTTAAGATTCCATATGCAGCATCCTCTTCACAGTTTTTGCCCTATTCTGGTGCTTCAGCACTTATGTCACCTGGACATTATCAGAAAATAGAGTCATCTATCCCACAACCCAGACATGGAGATAATACCGGAGTGCGTAAGGAACAGGAGATAAAGCAAGAATCTATTTCTTTGTCTGCTGAAGCAGCTGCAGCTCAGGAAGCATGTGAAAAGTGGCGACTAAGGGGAAACCAAGCATACTCTAATGGGGATCGATCTAAAGCTGAGGACTGCTACACACAAGGAGTGAATTGCGTTTCTAGAAATGAGACATCTAGAAGCTGTCTTAGGGCATTGATGCTGTGCTATAGCAACCGTGCAGCAACACGTATGACTGTTGGAAGAATAAGAGATGCACTTGGGGACTGTATGATGGCTGCTGCAATTGATCCCAACTTCCTGAAAGTGCAGGTTAGAGCTTCCAACTGTTATCTTGCTCTTGGGGAAGTTGAAGATGCTTCACAACATTTTAGGAGGTGCCTGCAATTAGCAAATGATGTCTGTGTGGACCGAAAGATTGCAGTAGAAGCTTCTGATGGCTTACACAAAGCACAGAAAGTGTCTGAATGCCTGAATCTTTCTGCTGGACTTTTGCTATGGAAAACATCTACTAATGCCGAGCATGCTTTACAACTTATTGATGAAGGTTTGGTAATAAGTCCTAGCTCAGAAAAATTACTTGAAATGAAAGCAGAGGCTCTTTTTGCGGTGCGGAGGTATGAAGAGGTGATTGAGCTGTGTGAGCAGACCCTTAGTTCTGCGGAAAAGAACAACCTTCCAGCAGATACCAATGACCAGGTCGTTTCTGCAGATAGTTCCGAACTCTCAAAGTACTTTTACTTCAGACTCTGGCGGTGCCGTATGATTTTTAAATCCTATTTTTATCTTGGAAAACTCGAGGAGGGTCTTGCTACACTAGATAAATATGAGGAAAAGATGTCTACCTCATATAGGAATTGGAGCAAAACTCTGCAATCATCAGAACCCCTTGTTCTCGTTGTACGTGAACTTCTGTCTCATAAGGTTGCAGGGAATGAAGCATTTCAGGCTGGAAGACATACTGAAGCTGTTGAGCATTATACTACTGCTTTGTCCTGCAATGTTGAATCACGTCCATTTACAGCTGTTTGTTTTTGCAATCGTGCTGCTGCATACAAAGCATTGGGCCAGATTACTGATGCTATTGCTGATTGCAGTCTAGCTATAGCTCTTGATGGAAATTATCTAAAGGCTATTTCTAGACGAGCCACATTATACGAGATGATCAGAGATTATGGAGAAGCTGCTAAAGATCTTCAGAGACTGGTATCTATTCTCACTAAGCAGGTAGAGGAAAAAACTAATCTGTGTGGAACATCTGACAGATCCATTAGCAGCACAAATGACTTGAGACAAGCTCGTCTTCGTCTCTCTGAAATAGAAGAAGAAGACAGAAAAGACATCCCCTTGGATATGTACCTTATTCTGGGAGTTGAACCATCTGTTTCAGCATCAGAAATCAAGAAGGCCTATCGGAAAGCTGCACTTCGACATCATCCTGACAAGGTTGGTCAATTCTTTTCAAGGAGTGATAATGGTGACGATGGGCGTTGGAAGGAGATAGCAGAAGAAGTGCACAAGGATGCTGACAGGCTTTTTAAAATGATTGGGGAGGCATATGCAGTACTTTCAGACCCAACCAAGCGTGCAAGGTATGACACCGAAGAGGAGATGAGGAATGCACAAAAGAAACGCAGTGGAAGCAGCACATCTAGAATGCCAGCAGATGTTCAAAATTACCCATTTGAAAGAAGTAGCAGTAGGCGACAATGGAGAGAAGTTCCGAGATCATATGGTAACTCATCTTCTAGAGGGTCAGAAGCAACATGGTCAAGTAGATATTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001671 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0006457 GO:0006458 GO:0008047 GO:0008150 GO:0009987 GO:0030234 GO:0031072 GO:0031974 GO:0031981 GO:0032781 GO:0043085 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043462 GO:0044093 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0048583 GO:0050789 GO:0050790 GO:0050794 GO:0051084 GO:0051085 GO:0051336 GO:0051345 GO:0060589 GO:0060590 GO:0061077 GO:0065007 GO:0065009 GO:0070013 GO:0080134 GO:0080135 GO:0098772 GO:1900034

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DnaJ TPR_8

Protein Analysis

896

Amino Acids

99.81

Weight (kDa)

6.11

Isoelectric Point (pI)

52.91

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004583)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G12430
fragaria_vesca	FvH4_3g28360 FvH4_3g28360 FvH4_3g28360 FvH4_3g28360
malus_domestica	MD03G1171100.v1.1 MD03G1171300.v1.1 MD11G1188500.v1.1 MD11G1188700.v1.1
prunus_persica	Prupe.4G255700_v2.0.a1 Prupe.4G255700_v2.0.a1 Prupe.4G255700_v2.0.a1 Prupe.4G255700_v2.0.a1
pyrus_communis	pycom03g12820 pycom03g12830 pycom03g12840 pycom03g12860 pycom11g16530 pycom15g27190
rosa_chinensis	RchiOBHm_Chr5g0053371
rosa_laevigata	RLG00000034766
rosa_multiflora	Rmu_sc0001966.1_g000003
rosa_roxburghii	Rroxscaffold_1G00029100
rosa_rugosa	Rorug05G0267200 Rorug05G0267300
rosa_samantha	Rh5AG339800 Rh5BG350200 Rh5CG376600 Rh5DG364200
rosa_wichuraiana	Rw5G032070 Rw5G032080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	2199
Acc36I	ACCTGC	2 cut(s)	1201, 2116
Acc65I	GGTACC	1 cut(s)	440
AccB1I	GGYRCC	3 cut(s)	440, 1278, 1656
AccI	GTMKAC	2 cut(s)	513, 1742
AccII	CGCG	1 cut(s)	134
AciI	CCGC	4 cut(s)	1508, 1513, 1562, 1654
AclWI	GGATC	5 cut(s)	469, 649, 1020, 1184, 2160
AcsI	RAATTY	3 cut(s)	68, 125, 340
AcuI	CTGAAG	8 cut(s)	270, 525, 573, 801, 963, 1627, 1884, 2081
AfaI	GTAC	6 cut(s)	419, 442, 1634, 1803, 2258, 2466
AfiI	CCNNNNNNNGG	4 cut(s)	809, 878, 1752, 2266
AflIII	ACRYGT	2 cut(s)	96, 1127
AjiI	CACGTC	1 cut(s)	1913
AjnI	CCWGG	3 cut(s)	214, 832, 1596
AjuI	GAANNNNNNNTTGG	2 cut(s)	277, 309
Alw21I	GWGCWC	2 cut(s)	569, 2418
Alw26I	GTCTC	5 cut(s)	1064, 1821, 2095, 2185, 2213
Alw44I	GTGCAC	1 cut(s)	2414
AlwI	GGATC	5 cut(s)	469, 649, 1020, 1184, 2160
AlwNI	CAGNNNCTG	3 cut(s)	551, 1650, 2104
Ama87I	CYCGRG	1 cut(s)	1697
AoxI	GGCC	3 cut(s)	264, 1966, 2307
ApaLI	GTGCAC	1 cut(s)	2414
ApoI	RAATTY	3 cut(s)	68, 125, 340
ArsI	GACNNNNNNTTYG	2 cut(s)	128, 160
Asp700I	GAANNNNTTC	1 cut(s)	1842
Asp718I	GGTACC	1 cut(s)	440
AspS9I	GGNCC	3 cut(s)	212, 1309, 1966
AsuHPI	GGTGA	4 cut(s)	643, 822, 1540, 2390
AvaI	CYCGRG	1 cut(s)	1697
AvaII	GGWCC	2 cut(s)	212, 1309
BaeGI	GKGCMC	1 cut(s)	2418
BanI	GGYRCC	3 cut(s)	440, 1278, 1656
BanII	GRGCYC	1 cut(s)	569
BarI	GAAGNNNNNNTAC	6 cut(s)	1625, 1657, 1794, 1826, 2629, 2661
BbsI	GAAGAC	3 cut(s)	1861, 2195, 2235
Bbv12I	GWGCWC	2 cut(s)	569, 2418
BbvCI	CCTCAGC	3 cut(s)	199, 504, 1026
BccI	CCATC	9 cut(s)	38, 213, 422, 587, 1168, 1331, 2009, 2287, 2378
BceAI	ACGGC	1 cut(s)	1644
BciT130I	CCWGG	3 cut(s)	216, 834, 1598
BclI	TGATCA	1 cut(s)	2064
BcoDI	GTCTC	5 cut(s)	1064, 1821, 2095, 2185, 2213
BfaI	CTAG	8 cut(s)	1062, 1077, 1464, 1718, 2000, 2040, 2553, 2649
BfmI	CTRYAG	7 cut(s)	63, 498, 750, 951, 1108, 1608, 2004
BfuAI	ACCTGC	2 cut(s)	1201, 2116
BglII	AGATCT	1 cut(s)	2092
BmcAI	AGTACT	2 cut(s)	1634, 2466
Bme1390I	CCNGG	3 cut(s)	216, 834, 1598
Bme18I	GGWCC	2 cut(s)	212, 1309
BmeT110I	CYCGRG	1 cut(s)	1697
BmgBI	CACGTC	1 cut(s)	1913
BmgT120I	GGNCC	3 cut(s)	212, 1309, 1966
BmiI	GGNNCC	4 cut(s)	213, 442, 1280, 1658
BmrFI	CCNGG	3 cut(s)	216, 834, 1598
BpiI	GAAGAC	3 cut(s)	1861, 2195, 2235
BplI	GAGNNNNNCTC	4 cut(s)	1753, 1785, 2182, 2214
BpmI	CTGGAG	1 cut(s)	689
Bpu10I	CCTNAGC	4 cut(s)	199, 504, 957, 1026
BpuEI	CTTGAG	1 cut(s)	2209
Bsa29I	ATCGAT	1 cut(s)	1015
BsaAI	YACGTR	2 cut(s)	1130, 1805
BsaJI	CCNNGG	3 cut(s)	215, 471, 2247
BsaWI	WCCGGW	1 cut(s)	890
Bsc4I	CCNNNNNNNGG	4 cut(s)	809, 878, 1752, 2266
Bse1I	ACTGG	4 cut(s)	109, 325, 558, 2109
Bse3DI	GCAATG	1 cut(s)	1906
BseBI	CCWGG	3 cut(s)	216, 834, 1598
BseCI	ATCGAT	1 cut(s)	1015
BseDI	CCNNGG	3 cut(s)	215, 471, 2247
BseGI	GGATG	5 cut(s)	22, 782, 2241, 2335, 2428
BseLI	CCNNNNNNNGG	4 cut(s)	809, 878, 1752, 2266
BseMI	GCAATG	1 cut(s)	1906
BseMII	CTCAG	5 cut(s)	213, 495, 971, 1017, 1482
BseNI	ACTGG	4 cut(s)	109, 325, 558, 2109
BseRI	GAGGAG	3 cut(s)	521, 1715, 2522
BseSI	GKGCMC	1 cut(s)	2418
BsgI	GTGCAG	3 cut(s)	1140, 1229, 2307
Bsh1236I	CGCG	1 cut(s)	134
BshFI	GGCC	3 cut(s)	266, 1968, 2309
BshNI	GGYRCC	3 cut(s)	440, 1278, 1656
BshVI	ATCGAT	1 cut(s)	1015
BsiHKAI	GWGCWC	2 cut(s)	569, 2418
BsiHKCI	CYCGRG	1 cut(s)	1697
BsiSI	CCGG	1 cut(s)	891
BslFI	GGGAC	3 cut(s)	225, 419, 1178
BslI	CCNNNNNNNGG	4 cut(s)	809, 878, 1752, 2266
BsmAI	GTCTC	5 cut(s)	1064, 1821, 2095, 2185, 2213
BsmBI	CGTCTC	1 cut(s)	2213
BsmFI	GGGAC	3 cut(s)	225, 419, 1178
BsmI	GAATGC	3 cut(s)	1373, 2524, 2562
BsnI	GGCC	3 cut(s)	266, 1968, 2309
BsoBI	CYCGRG	1 cut(s)	1697
Bsp1286I	GDGCHC	2 cut(s)	569, 2418
Bsp143I	GATC	9 cut(s)	461, 641, 1012, 1016, 1189, 2064, 2092, 2165, 2627
BspACI	CCGC	4 cut(s)	1508, 1513, 1562, 1654
BspANI	GGCC	3 cut(s)	266, 1968, 2309
BspCNI	CTCAG	5 cut(s)	212, 496, 970, 1018, 1481
BspDI	ATCGAT	1 cut(s)	1015
BspFNI	CGCG	1 cut(s)	134
BspLI	GGNNCC	4 cut(s)	213, 442, 1280, 1658
BspMAI	CTGCAG	3 cut(s)	502, 955, 1612
BspMI	ACCTGC	2 cut(s)	1201, 2116
BspPI	GGATC	5 cut(s)	469, 649, 1020, 1184, 2160
BspT107I	GGYRCC	3 cut(s)	440, 1278, 1656
BsrDI	GCAATG	1 cut(s)	1906
BsrI	ACTGG	4 cut(s)	109, 325, 558, 2109
BssECI	CCNNGG	3 cut(s)	215, 471, 2247
BssMI	GATC	9 cut(s)	461, 641, 1012, 1016, 1189, 2064, 2092, 2165, 2627
BssT1I	CCWWGG	1 cut(s)	2247
Bst2UI	CCWGG	3 cut(s)	216, 834, 1598
Bst4CI	ACNGT	6 cut(s)	422, 795, 1118, 1138, 1169, 1229
Bst6I	CTCTTC	6 cut(s)	5, 131, 670, 793, 1518, 2499
BstBAI	YACGTR	2 cut(s)	1130, 1805
BstC8I	GCNNGC	5 cut(s)	38, 1283, 1425, 2487, 2562
BstDEI	CTNAG	9 cut(s)	199, 504, 957, 983, 1026, 1088, 1468, 1553, 2121
BstENI	CCTNNNNNAGG	1 cut(s)	1750
BstF5I	GGATG	5 cut(s)	22, 782, 2241, 2335, 2428
BstFNI	CGCG	1 cut(s)	134
BstKTI	GATC	9 cut(s)	464, 644, 1015, 1019, 1192, 2067, 2095, 2168, 2630
BstMAI	GTCTC	5 cut(s)	1064, 1821, 2095, 2185, 2213
BstMBI	GATC	9 cut(s)	461, 641, 1012, 1016, 1189, 2064, 2092, 2165, 2627
BstNI	CCWGG	3 cut(s)	216, 834, 1598
BstNSI	RCATGY	2 cut(s)	969, 1427
BstSCI	CCNGG	3 cut(s)	214, 832, 1596
BstSFI	CTRYAG	7 cut(s)	63, 498, 750, 951, 1108, 1608, 2004
BstSLI	GKGCMC	1 cut(s)	2418
BstUI	CGCG	1 cut(s)	134
BstV2I	GAAGAC	3 cut(s)	1861, 2195, 2235
BstX2I	RGATCY	4 cut(s)	461, 641, 2092, 2165
BstYI	RGATCY	4 cut(s)	461, 641, 2092, 2165
Bsu15I	ATCGAT	1 cut(s)	1015
BsuRI	GGCC	3 cut(s)	266, 1968, 2309
BsuTUI	ATCGAT	1 cut(s)	1015
BtrI	CACGTC	1 cut(s)	1913
BtsCI	GGATG	5 cut(s)	22, 782, 2241, 2335, 2428
BtsI	GCAGTG	1 cut(s)	2542
BtsIMutI	CAGTG	2 cut(s)	332, 2542
BveI	ACCTGC	2 cut(s)	1201, 2116
Cac8I	GCNNGC	5 cut(s)	38, 1283, 1425, 2487, 2562
CaiI	CAGNNNCTG	3 cut(s)	551, 1650, 2104
Cfr13I	GGNCC	3 cut(s)	212, 1309, 1966
ClaI	ATCGAT	1 cut(s)	1015
CsiI	ACCWGGT	1 cut(s)	1596
Csp6I	GTAC	6 cut(s)	418, 441, 1633, 1802, 2257, 2465
CviAII	CATG	7 cut(s)	221, 574, 584, 878, 966, 1424, 2667
CviQI	GTAC	6 cut(s)	418, 441, 1633, 1802, 2257, 2465
DdeI	CTNAG	9 cut(s)	199, 504, 957, 983, 1026, 1088, 1468, 1553, 2121
DpnI	GATC	9 cut(s)	463, 643, 1014, 1018, 1191, 2066, 2094, 2167, 2629
DpnII	GATC	9 cut(s)	461, 641, 1012, 1016, 1189, 2064, 2092, 2165, 2627
DraI	TTTAAA	3 cut(s)	73, 1672, 2440
DrdI	GACNNNNNNGTC	1 cut(s)	2199
DseDI	GACNNNNNNGTC	1 cut(s)	2199
Eam1104I	CTCTTC	6 cut(s)	5, 131, 670, 793, 1518, 2499
EarI	CTCTTC	6 cut(s)	5, 131, 670, 793, 1518, 2499
Ecl136II	GAGCTC	1 cut(s)	567
Eco130I	CCWWGG	1 cut(s)	2247
Eco147I	AGGCCT	2 cut(s)	266, 2309
Eco24I	GRGCYC	1 cut(s)	569
Eco47I	GGWCC	2 cut(s)	212, 1309
Eco53kI	GAGCTC	1 cut(s)	567
Eco57I	CTGAAG	8 cut(s)	270, 525, 573, 801, 963, 1627, 1884, 2081
Eco88I	CYCGRG	1 cut(s)	1697
EcoICRI	GAGCTC	1 cut(s)	567
EcoNI	CCTNNNNNAGG	1 cut(s)	1750
EcoO109I	RGGNCCY	1 cut(s)	212
EcoRI	GAATTC	2 cut(s)	125, 340
EcoRII	CCWGG	3 cut(s)	214, 832, 1596
EcoT14I	CCWWGG	1 cut(s)	2247
EcoT38I	GRGCYC	1 cut(s)	569
ErhI	CCWWGG	1 cut(s)	2247
Esp3I	CGTCTC	1 cut(s)	2213
FaeI	CATG	7 cut(s)	224, 577, 587, 881, 969, 1427, 2670
FalI	AAGNNNNNCTT	6 cut(s)	438, 470, 2187, 2219, 2310, 2342
FaqI	GGGAC	3 cut(s)	225, 419, 1178
FatI	CATG	7 cut(s)	220, 573, 583, 877, 965, 1423, 2666
FauNDI	CATATG	3 cut(s)	775, 2458, 2632
FbaI	TGATCA	1 cut(s)	2064
FblI	GTMKAC	2 cut(s)	513, 1742
FokI	GGATG	5 cut(s)	29, 769, 2228, 2322, 2435
FriOI	GRGCYC	1 cut(s)	569
FspBI	CTAG	8 cut(s)	1062, 1077, 1464, 1718, 2000, 2040, 2553, 2649
GsuI	CTGGAG	1 cut(s)	689
HaeIII	GGCC	3 cut(s)	266, 1968, 2309
HapII	CCGG	1 cut(s)	891
Hin1II	CATG	7 cut(s)	224, 577, 587, 881, 969, 1427, 2670
HindIII	AAGCTT	2 cut(s)	487, 1329
HinfI	GANTC	7 cut(s)	272, 769, 854, 923, 1375, 1647, 1907
HpaII	CCGG	1 cut(s)	891
HphI	GGTGA	4 cut(s)	643, 822, 1540, 2390
Hpy166II	GTNNAC	7 cut(s)	102, 112, 514, 1309, 1743, 1808, 2416
Hpy8I	GTNNAC	7 cut(s)	102, 112, 514, 1309, 1743, 1808, 2416
HpyAV	CCTTC	9 cut(s)	233, 440, 452, 591, 627, 1439, 1586, 2299, 2389
HpyCH4III	ACNGT	6 cut(s)	422, 795, 1118, 1138, 1169, 1229
HpyCH4IV	ACGT	4 cut(s)	96, 1129, 1804, 1912
HpyF3I	CTNAG	9 cut(s)	199, 504, 957, 983, 1026, 1088, 1468, 1553, 2121
HpySE526I	ACGT	4 cut(s)	96, 1129, 1804, 1912
Hsp92II	CATG	7 cut(s)	224, 577, 587, 881, 969, 1427, 2670
KpnI	GGTACC	1 cut(s)	444
Ksp22I	TGATCA	1 cut(s)	2064
Kzo9I	GATC	9 cut(s)	461, 641, 1012, 1016, 1189, 2064, 2092, 2165, 2627
LmnI	GCTCC	1 cut(s)	1761
MabI	ACCWGGT	1 cut(s)	1596
MaeI	CTAG	8 cut(s)	1062, 1077, 1464, 1718, 2000, 2040, 2553, 2649
MaeII	ACGT	4 cut(s)	96, 1129, 1804, 1912
MaeIII	GTNAC	4 cut(s)	422, 828, 2378, 2636
MalI	GATC	9 cut(s)	463, 643, 1014, 1018, 1191, 2066, 2094, 2167, 2629
MboI	GATC	9 cut(s)	461, 641, 1012, 1016, 1189, 2064, 2092, 2165, 2627
MfeI	CAATTG	1 cut(s)	1185
MflI	RGATCY	4 cut(s)	461, 641, 2092, 2165
MhlI	GDGCHC	2 cut(s)	569, 2418
MlyI	GAGTC	2 cut(s)	863, 1641
MmeI	TCCRAC	3 cut(s)	1120, 1248, 2372
MroXI	GAANNNNTTC	1 cut(s)	1842
MseI	TTAA	7 cut(s)	72, 185, 492, 519, 765, 1671, 2439
MslI	CAYNNNNRTG	1 cut(s)	2421
MspA1I	CMGCKG	4 cut(s)	176, 503, 950, 1925
MspI	CCGG	1 cut(s)	891
MspR9I	CCNGG	3 cut(s)	216, 834, 1598
MunI	CAATTG	1 cut(s)	1185
Mva1269I	GAATGC	3 cut(s)	1373, 2524, 2562
MvaI	CCWGG	3 cut(s)	216, 834, 1598
MvnI	CGCG	1 cut(s)	134
NdeI	CATATG	3 cut(s)	775, 2458, 2632
NdeII	GATC	9 cut(s)	461, 641, 1012, 1016, 1189, 2064, 2092, 2165, 2627
NlaIII	CATG	7 cut(s)	224, 577, 587, 881, 969, 1427, 2670
NlaIV	GGNNCC	4 cut(s)	213, 442, 1280, 1658
NmeAIII	GCCGAG	1 cut(s)	1444
NmuCI	GTSAC	3 cut(s)	422, 828, 2378
NspI	RCATGY	2 cut(s)	969, 1427
PaeI	GCATGC	1 cut(s)	1427
PaeR7I	CTCGAG	1 cut(s)	1697
PceI	AGGCCT	2 cut(s)	266, 2309
PctI	GAATGC	3 cut(s)	1373, 2524, 2562
PdmI	GAANNNNTTC	1 cut(s)	1842
PfeI	GAWTC	5 cut(s)	272, 769, 923, 1375, 1907
PflFI	GACNNNGTC	1 cut(s)	1598
PleI	GAGTC	2 cut(s)	862, 1641
PpsI	GAGTC	2 cut(s)	862, 1641
Ppu21I	YACGTR	2 cut(s)	1130, 1805
PpuMI	RGGWCCY	1 cut(s)	212
Psp124BI	GAGCTC	1 cut(s)	569
Psp5II	RGGWCCY	1 cut(s)	212
Psp6I	CCWGG	3 cut(s)	214, 832, 1596
PspGI	CCWGG	3 cut(s)	214, 832, 1596
PspN4I	GGNNCC	4 cut(s)	213, 442, 1280, 1658
PspPI	GGNCC	3 cut(s)	212, 1309, 1966
PspPPI	RGGWCCY	1 cut(s)	212
PspXI	VCTCGAGB	1 cut(s)	1697
PstI	CTGCAG	3 cut(s)	502, 955, 1612
PstNI	CAGNNNCTG	3 cut(s)	551, 1650, 2104
PsuI	RGATCY	4 cut(s)	461, 641, 2092, 2165
PsyI	GACNNNGTC	1 cut(s)	1598
PvuII	CAGCTG	4 cut(s)	176, 503, 950, 1925
RsaI	GTAC	6 cut(s)	419, 442, 1634, 1803, 2258, 2466
RsaNI	GTAC	6 cut(s)	418, 441, 1633, 1802, 2257, 2465
RseI	CAYNNNNRTG	1 cut(s)	2421
SacI	GAGCTC	1 cut(s)	569
SaqAI	TTAA	7 cut(s)	72, 185, 492, 519, 765, 1671, 2439
Sau3AI	GATC	9 cut(s)	461, 641, 1012, 1016, 1189, 2064, 2092, 2165, 2627
Sau96I	GGNCC	3 cut(s)	212, 1309, 1966
ScaI	AGTACT	2 cut(s)	1634, 2466
SchI	GAGTC	2 cut(s)	863, 1641
ScrFI	CCNGG	3 cut(s)	216, 834, 1598
SduI	GDGCHC	2 cut(s)	569, 2418
SexAI	ACCWGGT	1 cut(s)	1596
SfcI	CTRYAG	7 cut(s)	63, 498, 750, 951, 1108, 1608, 2004
Sfr274I	CTCGAG	1 cut(s)	1697
SinI	GGWCC	2 cut(s)	212, 1309
SlaI	CTCGAG	1 cut(s)	1697
SmiMI	CAYNNNNRTG	1 cut(s)	2421
SmlI	CTYRAG	2 cut(s)	1697, 2188
SmoI	CTYRAG	2 cut(s)	1697, 2188
SphI	GCATGC	1 cut(s)	1427
SseBI	AGGCCT	2 cut(s)	266, 2309
SsiI	CCGC	4 cut(s)	1508, 1513, 1562, 1654
SspMI	CTAG	8 cut(s)	1062, 1077, 1464, 1718, 2000, 2040, 2553, 2649
SstI	GAGCTC	1 cut(s)	569
StuI	AGGCCT	2 cut(s)	266, 2309
StyD4I	CCNGG	3 cut(s)	214, 832, 1596
StyI	CCWWGG	1 cut(s)	2247
TaaI	ACNGT	6 cut(s)	422, 795, 1118, 1138, 1169, 1229
TaiI	ACGT	4 cut(s)	99, 1132, 1807, 1915
TaqI	TCGA	4 cut(s)	563, 1015, 1698, 2329
TaqII	GACCGA	1 cut(s)	1326
TatI	WGTACW	2 cut(s)	1632, 2464
TfiI	GAWTC	5 cut(s)	272, 769, 923, 1375, 1907
Tru1I	TTAA	7 cut(s)	72, 185, 492, 519, 765, 1671, 2439
Tru9I	TTAA	7 cut(s)	72, 185, 492, 519, 765, 1671, 2439
TscAI	CASTG	2 cut(s)	332, 2542
TseFI	GTSAC	3 cut(s)	422, 828, 2378
Tsp45I	GTSAC	3 cut(s)	422, 828, 2378
TspDTI	ATGAA	7 cut(s)	17, 179, 387, 1458, 1502, 1536, 1851
TspGWI	ACGGA	1 cut(s)	288
TspRI	CASTG	2 cut(s)	332, 2542
Tth111I	GACNNNGTC	1 cut(s)	1598
VneI	GTGCAC	1 cut(s)	2414
VpaK11BI	GGWCC	2 cut(s)	212, 1309
XagI	CCTNNNNNAGG	1 cut(s)	1750
XapI	RAATTY	3 cut(s)	68, 125, 340
XbaI	TCTAGA	5 cut(s)	1061, 1076, 2039, 2552, 2648
XceI	RCATGY	2 cut(s)	969, 1427
XcmI	CCANNNNNNNNNTGG	2 cut(s)	212, 590
XhoI	CTCGAG	1 cut(s)	1697
XmiI	GTMKAC	2 cut(s)	513, 1742
XmnI	GAANNNNTTC	1 cut(s)	1842
XspI	CTAG	8 cut(s)	1062, 1077, 1464, 1718, 2000, 2040, 2553, 2649
ZrmI	AGTACT	2 cut(s)	1634, 2466

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.