Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0004583

Physical Location & Seq

Genomic Coordinates Forward (+)

21325297 .. 21334596

Gene Structure 9300 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g28360.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3669 bp

ATGTCGCCGGCGTTGCTAGAGTCCCCACCTCCGGCAACCACCACCGGTCAGATTTCTTTTTCTCTCCCTCTTTTCAATCAATCTAACACCATCATGAACCCTTCGAATGCCGGCTCCGATTTTAGCTTCAGTTCCTCGTCGCGCTCAGGTCTTTCGAGGCCGAGGCTTTTGAAGGTCCGGCGAGGCCTGAATTCTCAGGTCTTGGAACCATCGCCGTCGCCGGAGGCCGGGGCTCCTCCCGGCTTCAATCCGTTCCGGATTTCAGGCTCCGGAGATGACTCGGATTCGAATTTGAATAAGGGGAGAGGTGTGACTGAGCAAATGAGCGATTTGAGAATCGGGAGTGGCGTGGAGACGAAAGATGATTCAGGAAGTAGGTTGAGTTCAGCTGGAGGGTTTGTGTTTGGGGGGAGTAGTTCTAGTTTCGATGAAAGTGTTGCGTCGGATATGAGCAAGTTGAATATTGAGGGCTCTGGGAGTGGTGGAGCTGTTGAGAGAGGTAATGATGGGAGATTTGATAGTAGGACAGGGTTCGGGGTGGGGAGTAAGGACAATGTGGGTGGTTCTTTGGGTAGAAATGCGGATTCGGAGCTCCTCCATGAGTTGGAGAAGAAATTGAACATTAATGAGAATGAGCAGATGGGCGGCGCGCATAATGCTGATGGTGTGAATAAGTTTGTGTTTAGTACTAGCAAGTCCTTTGGTGGAAGCTCGGTGAATGCACTTCCTGATCAGATGAAGAATCTGAACGTAGGTCTTAGTTTCGATGGGGGAAAAGAGAGTATTCTGTTGAGAAAGATGGAGAGTTTGGATATAGGAGCCAAGGCTGGACACTCTACTCAATCAGATAGAGGGACATCATCCCACGAAACGCTTGTGAAGAACATGGAACCTGGAAACCGCGGTGACAGACCTGAGAGGGAGGAGGGATTTAACTTTACAAGCAAACAAGAGCATTTGAGCACATCCTCTGTAGAGTTTAAAACACCAAGCAGTAAAGCCAACTTGTTTTCTGGCATAAACAAGAAATTGGAATTCAATGCAAAGAGGGAGCCAGCAAGGTCTAGGGATACAAGAATGAATAAACCAAGTGGAAAACTAAGGAACTCTACTCCATCCCAGCTGTGGCACGGGCATGGTGCTGTTTCAAATATTGGTTCTCCTGTAAACGTTGAGGCTTCTGAATCCTATTCACCAATGGACATTTCTCCTTATCAAGAAACATTGGCTGGTAACCAATGTTCAAAAGAAAATTCTGCATCTTCTGAATCATTTAGTCTGGTCAACGACTATCTGGAAACTGATTCAGTCCCGAAAGCTTCAAATGATTCTATTGATGAAGATCTTGCTATGGCAACAGAATGTCTTAATATAAATAAAGTTGATGGAGTGAGCAGATCGTCGCAAGGTGAAGCTTTTGAGCATCGTTTAGGTGGAAGTGTTAATGCTGATGCAACTGTTGAAGGATATGTTTCTGGGGCTGAAACCGAAAGCTTTAAGTCTGCAACTGAGGAGGTAGACTATATTAGTGACACGGCTAATTCAGCAGAGAATGAAGTTAGTCCAAGCCCAAAGATGGAGAGATACGATACTGATGGCAGGATACACTTTGACTTTCATGCAAGCTCATCGAATAGAAGTGGATTAAACTTCACATTTGCTGCCTCTACTGCTGCTCAATCTCAATTATCACCATCAAAACGCTTGCACAAAAAGAAAAATATGGTGAAGATTGGTCAAGATGCCAATACTTTTGTTCCAAATGGTAAGGTTCCATATGGATCATCATCTGCAGAGTTTTCGCCATATTCTGGAGCTCCAGTACTTTCGACACTGGGGCTCCATCATGAAATTCCAATATCACAATGCAATGAAAATAATTCTGGGGTGCAGAAGGAAAAGGAGATCAAACAAGAGGCTGTCTCTTTGTCTGCTGAAACAGCTGCAGCTCAGGAAGCATGTGAGAAGTGGCGACTAAGGGGTAACCAAGCATATTCTAATGGGGATCTGTCTAAGGCCGAAGACTGCTATACCCAAGGGGTAAATCGTGTTTCTGAAAATGAGACATCTAGAAGTTGTCTCAGGGCACTGATGCTGTGCTATAGCAACCGTGCAGCAACACGTATGTCTCTTGGAAGAATTCAAGATGCACTTGGAGATTGTATGATGGCTGCTGCAATAGATCCCAACTTCCTCAAAGTGCAGGTTAGAGCTGCCAACTGTTATCTTACCCTTGGGGAGGTTCAAGATGCTTCACAACATTTTAGTAGGTGCCTCCACTTGGCAAGTGATGTCTGTGTGGACCAAAAGATTGCAGCAGAAGCCTCTGATGGATTACAAAAGGCGCAGAAAGTGTCAGAATGTCTGAATCTTTGTGCTGAACTTATGCAAAGGAAGACATCTATCAATGCAGAGCGTGCTTTGGAACTTATTGCTGAGGCTTTGGCAATAAGCCCTAGTTCAGAAAAGTTACATGAAATGAAGGCGGAGGCTCTTTTCACGATGCGGAGGTATGAAGAGGTGATTGAGCTTTGTGAGAAGACCCTTGGTTCTGCTGAAAAGAACTCCCCTTTAGTAGATACCTCCATTTCATTAGATGGTTATGAACTCTCAAAGACCTTGTACTTCAGACTTTGGCGGTGTCGTTTGATTTTTAAATCCTATTTCCATTTAGGAAAACTTGAGGAGGGCCTTGCTTCACTAGAGAAAGAAGAGGAAAAGGTATCTACAACGTATAGGAATTGGAGAAAAATTCTGGAATCATCTATTCCCGTTCTCATTGTTCGTGAGCTGTTATCTCATAAGGTTGCTGGGAATGAAGCATTTCAGGCAGGGAGGCATAATGAGGCTGTTGAGCATTATACTACTGCTTTGTCATGTAATACAGAATCACGTCCTTTCACAGCTGTTTGTTTTTGCAATCGTGCTGCTGCATACAAAGCATTAGGCCAGATCACTGATGCTATTGCAGATTGCAGCCTAGCTATAGCTCTTGATGGAAGTTATCTAAAGGCTATCTCTAGGCGAGCTACGTTATATGAGATGATCAGAGATTATGGACAAGCAGCTAAAGATCTTAATAGACTTGTATCTCTTCTCACTAAGCAGTTAGAGGAAAATATCAATCAGTGTGGAACCTTTGATATATCCAATAGCATCAAAAGTGATTTGAAACAAGCTCGTCTTCGTCTTTCAGAAGTAGAAGAAGAAGCTAGAAAGGACATCCCCTTGGATATGTACATTATTCTGGGAATCAAACCATCTATTTCAGCATCAGAAATTAAGAAAGCCTATCGGAAAGCTGCACTAAGACATCATCCTGACAAGGCTGTTCAATTCTTTGCTAGGAGTGAAACTGGTGATGATGGGCTCTGGAAGGAGATAGCAGAAGAAGTGCACAAGGATGCTGACAGGCTTTTTAAAATGATTGGGGAGGCATATGCAGTACTTTCAGACTCTGCCAAGCGTGCACGGTATGATGCTGAAGAGCAGACTAGGAATGGTCAAAAGAAACGCAGTGGAAGTAGCGCAGCTAGAATGCCTGCAGATGCTCAAAATTACCCATTTGAAAGAAGCGGAAGTAGCCGACAGTGGAGAGAGTCGTGGAGATCATATGGCAACTCATATTCCAGAGGGTCAGAAGCGACATGGTCTGATAGATATTCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001671 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0006457 GO:0006458 GO:0008047 GO:0008150 GO:0009987 GO:0030234 GO:0031072 GO:0031974 GO:0031981 GO:0032781 GO:0043085 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043462 GO:0044093 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0048583 GO:0050789 GO:0050790 GO:0050794 GO:0051084 GO:0051085 GO:0051336 GO:0051345 GO:0060589 GO:0060590 GO:0061077 GO:0065007 GO:0065009 GO:0070013 GO:0080134 GO:0080135 GO:0098772 GO:1900034

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DnaJ TPR_8

Protein Analysis

1223

Amino Acids

133.36

Weight (kDa)

5.89

Isoelectric Point (pI)

49.97

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DnaJ	PF00226	1078 - 1160	4.1e-15	DnaJ domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0004583)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G12430
fragaria_vesca	FvH4_3g28360 FvH4_3g28360 FvH4_3g28360 FvH4_3g28360
malus_domestica	MD03G1171100.v1.1 MD03G1171300.v1.1 MD11G1188500.v1.1 MD11G1188700.v1.1
prunus_persica	Prupe.4G255700_v2.0.a1 Prupe.4G255700_v2.0.a1 Prupe.4G255700_v2.0.a1 Prupe.4G255700_v2.0.a1
pyrus_communis	pycom03g12820 pycom03g12830 pycom03g12840 pycom03g12860 pycom11g16530 pycom15g27190
rosa_chinensis	RchiOBHm_Chr5g0053371
rosa_laevigata	RLG00000034766
rosa_multiflora	Rmu_sc0001966.1_g000003
rosa_roxburghii	Rroxscaffold_1G00029100
rosa_rugosa	Rorug05G0267200 Rorug05G0267300
rosa_samantha	Rh5AG339800 Rh5BG350200 Rh5CG376600 Rh5DG364200
rosa_wichuraiana	Rw5G032070 Rw5G032080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	2194
AccB1I	GGYRCC	1 cut(s)	2271
AccB7I	CCANNNNNTGG	2 cut(s)	604, 1811
AccI	GTMKAC	1 cut(s)	1518
AccII	CGCG	3 cut(s)	142, 650, 903
AccIII	TCCGGA	2 cut(s)	255, 269
AciI	CCGC	8 cut(s)	581, 645, 901, 903, 2486, 2506, 2638, 3576
AclI	AACGTT	1 cut(s)	1170
AclWI	GGATC	3 cut(s)	1789, 2013, 2177
AcsI	RAATTY	7 cut(s)	190, 289, 1034, 1252, 1851, 2139, 2751
AcuI	CTGAAG	3 cut(s)	112, 2611, 3504
AfaI	GTAC	5 cut(s)	688, 1824, 2624, 3239, 3447
AfiI	CCNNNNNNNGG	8 cut(s)	31, 227, 604, 1125, 1576, 1811, 2239, 2281
AflIII	ACRYGT	1 cut(s)	2120
AgeI	ACCGGT	1 cut(s)	44
AjiI	CACGTC	1 cut(s)	2894
AjnI	CCWGG	1 cut(s)	892
AjuI	GAANNNNNNNTTGG	2 cut(s)	1189, 1221
Alw21I	GWGCWC	5 cut(s)	594, 965, 1819, 3399, 3472
Alw26I	GTCTC	5 cut(s)	347, 1927, 2057, 2084, 2133
Alw44I	GTGCAC	2 cut(s)	3395, 3468
AlwI	GGATC	3 cut(s)	1789, 2013, 2177
AlwNI	CAGNNNCTG	1 cut(s)	3458
Aor13HI	TCCGGA	2 cut(s)	255, 269
AoxI	GGCC	6 cut(s)	158, 184, 225, 2016, 2689, 2947
ApaLI	GTGCAC	2 cut(s)	3395, 3468
ApoI	RAATTY	7 cut(s)	190, 289, 1034, 1252, 1851, 2139, 2751
AseI	ATTAAT	1 cut(s)	624
AsiGI	ACCGGT	1 cut(s)	44
Asp700I	GAANNNNTTC	1 cut(s)	2823
AspLEI	GCGC	5 cut(s)	144, 650, 652, 2347, 3530
AspS9I	GGNCC	3 cut(s)	175, 2302, 2689
AsuC2I	CCSGG	2 cut(s)	229, 240
AsuHPI	GGTGA	8 cut(s)	727, 917, 1185, 1421, 1683, 1738, 2533, 3371
AsuII	TTCGAA	2 cut(s)	104, 287
AvaII	GGWCC	2 cut(s)	175, 2302
BaeGI	GKGCMC	3 cut(s)	2089, 3399, 3472
BanI	GGYRCC	1 cut(s)	2271
BanII	GRGCYC	6 cut(s)	235, 473, 594, 1819, 1842, 3372
BbsI	GAAGAC	4 cut(s)	2028, 2402, 2546, 3176
Bbv12I	GWGCWC	5 cut(s)	594, 965, 1819, 3399, 3472
BbvCI	CCTCAGC	1 cut(s)	2436
BceAI	ACGGC	2 cut(s)	199, 1551
BcgI	CGANNNNNNTGC	4 cut(s)	1611, 1645, 1782, 1816
BciT130I	CCWGG	1 cut(s)	894
BciVI	GTATCC	2 cut(s)	1063, 1596
BclI	TGATCA	2 cut(s)	730, 3045
BcnI	CCSGG	2 cut(s)	229, 240
BcoDI	GTCTC	5 cut(s)	347, 1927, 2057, 2084, 2133
BfmI	CTRYAG	6 cut(s)	972, 1791, 1944, 2101, 2985, 3543
BfuAI	ACCTGC	1 cut(s)	2194
BfuI	GTATCC	2 cut(s)	1063, 1596
BglII	AGATCT	2 cut(s)	1342, 3073
BmcAI	AGTACT	3 cut(s)	688, 1824, 3447
Bme1390I	CCNGG	3 cut(s)	229, 240, 894
Bme18I	GGWCC	2 cut(s)	175, 2302
BmgBI	CACGTC	1 cut(s)	2894
BmgT120I	GGNCC	3 cut(s)	175, 2302, 2689
BmrFI	CCNGG	3 cut(s)	229, 240, 894
BmrI	ACTGGG	1 cut(s)	1844
BmuI	ACTGGG	1 cut(s)	1844
BpiI	GAAGAC	4 cut(s)	2028, 2402, 2546, 3176
BplI	GAGNNNNNCTC	2 cut(s)	1907, 1939
BpmI	CTGGAG	3 cut(s)	411, 1803, 1833
Bpu10I	CCTNAGC	3 cut(s)	145, 1950, 2436
Bpu14I	TTCGAA	2 cut(s)	104, 287
BpuEI	CTTGAG	1 cut(s)	2702
BpuMI	CCSGG	2 cut(s)	229, 240
BsaAI	YACGTR	1 cut(s)	2123
BsaBI	GATNNNNATC	2 cut(s)	1341, 1786
BsaJI	CCNNGG	8 cut(s)	161, 228, 822, 901, 2035, 2233, 2545, 3228
BsaWI	WCCGGW	3 cut(s)	44, 255, 269
BsaXI	ACNNNNNCTCC	6 cut(s)	384, 414, 1806, 1824, 1836, 1854
Bsc4I	CCNNNNNNNGG	8 cut(s)	31, 227, 604, 1125, 1576, 1811, 2239, 2281
Bse118I	RCCGGY	3 cut(s)	7, 44, 110
Bse1I	ACTGG	3 cut(s)	1820, 1839, 3361
Bse3DI	GCAATG	1 cut(s)	1876
Bse8I	GATNNNNATC	2 cut(s)	1341, 1786
BseAI	TCCGGA	2 cut(s)	255, 269
BseBI	CCWGG	1 cut(s)	894
BseDI	CCNNGG	8 cut(s)	161, 228, 822, 901, 2035, 2233, 2545, 3228
BseGI	GGATG	6 cut(s)	860, 965, 1115, 3222, 3316, 3409
BseJI	GATNNNNATC	2 cut(s)	1341, 1786
BseLI	CCNNNNNNNGG	8 cut(s)	31, 227, 604, 1125, 1576, 1811, 2239, 2281
BseMI	GCAATG	1 cut(s)	1876
BseMII	CTCAG	8 cut(s)	159, 209, 306, 906, 1500, 1964, 2095, 2427
BseNI	ACTGG	3 cut(s)	1820, 1839, 3361
BsePI	GCGCGC	1 cut(s)	648
BseRI	GAGGAG	5 cut(s)	225, 584, 938, 1526, 2699
BseSI	GKGCMC	3 cut(s)	2089, 3399, 3472
BseYI	CCCAGC	2 cut(s)	1119, 2810
BsgI	GTGCAG	4 cut(s)	1910, 2133, 2222, 3288
Bsh1236I	CGCG	3 cut(s)	142, 650, 903
BshFI	GGCC	6 cut(s)	160, 186, 227, 2018, 2691, 2949
BshNI	GGYRCC	1 cut(s)	2271
BshTI	ACCGGT	1 cut(s)	44
BsiHKAI	GWGCWC	5 cut(s)	594, 965, 1819, 3399, 3472
BslFI	GGGAC	3 cut(s)	7, 868, 1295
BslI	CCNNNNNNNGG	8 cut(s)	31, 227, 604, 1125, 1576, 1811, 2239, 2281
BsmAI	GTCTC	5 cut(s)	347, 1927, 2057, 2084, 2133
BsmBI	CGTCTC	1 cut(s)	347
BsmFI	GGGAC	3 cut(s)	7, 868, 1295
BsmI	GAATGC	3 cut(s)	112, 724, 3543
BsnI	GGCC	6 cut(s)	160, 186, 227, 2018, 2691, 2949
Bsp119I	TTCGAA	2 cut(s)	104, 287
Bsp13I	TCCGGA	2 cut(s)	255, 269
Bsp1407I	TGTACA	1 cut(s)	3237
BspACI	CCGC	8 cut(s)	581, 645, 901, 903, 2486, 2506, 2638, 3576
BspANI	GGCC	6 cut(s)	160, 186, 227, 2018, 2691, 2949
BspCNI	CTCAG	8 cut(s)	158, 208, 307, 907, 1501, 1963, 2094, 2428
BspEI	TCCGGA	2 cut(s)	255, 269
BspFNI	CGCG	3 cut(s)	142, 650, 903
BspHI	TCATGA	3 cut(s)	93, 1846, 3665
BspMAI	CTGCAG	3 cut(s)	1795, 1948, 3547
BspMI	ACCTGC	1 cut(s)	2194
BspPI	GGATC	3 cut(s)	1789, 2013, 2177
BspQI	GCTCTTC	1 cut(s)	3480
BspT104I	TTCGAA	2 cut(s)	104, 287
BspT107I	GGYRCC	1 cut(s)	2271
BsrDI	GCAATG	1 cut(s)	1876
BsrFI	RCCGGY	3 cut(s)	7, 44, 110
BsrGI	TGTACA	1 cut(s)	3237
BsrI	ACTGG	3 cut(s)	1820, 1839, 3361
BssAI	RCCGGY	3 cut(s)	7, 44, 110
BssECI	CCNNGG	8 cut(s)	161, 228, 822, 901, 2035, 2233, 2545, 3228
BssHII	GCGCGC	1 cut(s)	648
BssT1I	CCWWGG	5 cut(s)	822, 2035, 2233, 2545, 3228
Bst2UI	CCWGG	1 cut(s)	894
Bst4CI	ACNGT	5 cut(s)	1459, 2111, 2222, 3474, 3591
Bst6I	CTCTTC	4 cut(s)	2511, 2706, 3099, 3480
BstAPI	GCANNNNNTGC	1 cut(s)	2417
BstAUI	TGTACA	1 cut(s)	3237
BstBAI	YACGTR	1 cut(s)	2123
BstBI	TTCGAA	2 cut(s)	104, 287
BstDSI	CCRYGG	1 cut(s)	901
BstEII	GGTNACC	2 cut(s)	1232, 1982
BstENI	CCTNNNNNAGG	1 cut(s)	2237
BstF5I	GGATG	6 cut(s)	860, 965, 1115, 3222, 3316, 3409
BstFNI	CGCG	3 cut(s)	142, 650, 903
BstHHI	GCGC	5 cut(s)	144, 650, 652, 2347, 3530
BstMAI	GTCTC	5 cut(s)	347, 1927, 2057, 2084, 2133
BstNI	CCWGG	1 cut(s)	894
BstNSI	RCATGY	1 cut(s)	1962
BstPI	GGTNACC	2 cut(s)	1232, 1982
BstSCI	CCNGG	3 cut(s)	227, 238, 892
BstSFI	CTRYAG	6 cut(s)	972, 1791, 1944, 2101, 2985, 3543
BstSLI	GKGCMC	3 cut(s)	2089, 3399, 3472
BstUI	CGCG	3 cut(s)	142, 650, 903
BstV2I	GAAGAC	4 cut(s)	2028, 2402, 2546, 3176
BstX2I	RGATCY	4 cut(s)	1342, 2005, 2182, 3073
BstYI	RGATCY	4 cut(s)	1342, 2005, 2182, 3073
BsuI	GTATCC	2 cut(s)	1063, 1596
BsuRI	GGCC	6 cut(s)	160, 186, 227, 2018, 2691, 2949
BtgI	CCRYGG	1 cut(s)	901
BtgZI	GCGATG	1 cut(s)	195
BtrI	CACGTC	1 cut(s)	2894
BtsCI	GGATG	6 cut(s)	860, 965, 1115, 3222, 3316, 3409
BtsI	GCAGTG	1 cut(s)	3523
BtsIMutI	CAGTG	6 cut(s)	1832, 2087, 2955, 3134, 3523, 3596
BveI	ACCTGC	1 cut(s)	2194
CaiI	CAGNNNCTG	1 cut(s)	3458
CciI	TCATGA	3 cut(s)	93, 1846, 3665
CfoI	GCGC	5 cut(s)	144, 650, 652, 2347, 3530
Cfr10I	RCCGGY	3 cut(s)	7, 44, 110
Cfr13I	GGNCC	3 cut(s)	175, 2302, 2689
Cfr42I	CCGCGG	1 cut(s)	904
CseI	GACGC	1 cut(s)	429
Csp6I	GTAC	5 cut(s)	687, 1823, 2623, 3238, 3446
CspAI	ACCGGT	1 cut(s)	44
CspCI	CAANNNNNGTGG	4 cut(s)	541, 576, 3112, 3147
CviQI	GTAC	5 cut(s)	687, 1823, 2623, 3238, 3446
DraI	TTTAAA	3 cut(s)	982, 2656, 3421
Eam1104I	CTCTTC	4 cut(s)	2511, 2706, 3099, 3480
EarI	CTCTTC	4 cut(s)	2511, 2706, 3099, 3480
EciI	GGCGGA	1 cut(s)	2501
Ecl136II	GAGCTC	2 cut(s)	592, 1817
Eco130I	CCWWGG	5 cut(s)	822, 2035, 2233, 2545, 3228
Eco147I	AGGCCT	1 cut(s)	186
Eco24I	GRGCYC	6 cut(s)	235, 473, 594, 1819, 1842, 3372
Eco47I	GGWCC	2 cut(s)	175, 2302
Eco53kI	GAGCTC	2 cut(s)	592, 1817
Eco57I	CTGAAG	3 cut(s)	112, 2611, 3504
Eco91I	GGTNACC	2 cut(s)	1232, 1982
EcoICRI	GAGCTC	2 cut(s)	592, 1817
EcoNI	CCTNNNNNAGG	1 cut(s)	2237
EcoO109I	RGGNCCY	1 cut(s)	2689
EcoO65I	GGTNACC	2 cut(s)	1232, 1982
EcoRI	GAATTC	3 cut(s)	190, 1034, 2139
EcoRII	CCWGG	1 cut(s)	892
EcoT14I	CCWWGG	5 cut(s)	822, 2035, 2233, 2545, 3228
EcoT38I	GRGCYC	6 cut(s)	235, 473, 594, 1819, 1842, 3372
ErhI	CCWWGG	5 cut(s)	822, 2035, 2233, 2545, 3228
Esp3I	CGTCTC	1 cut(s)	347
FalI	AAGNNNNNCTT	4 cut(s)	2136, 2168, 3168, 3200
FaqI	GGGAC	3 cut(s)	7, 868, 1295
FauNDI	CATATG	3 cut(s)	1777, 3439, 3613
FbaI	TGATCA	2 cut(s)	730, 3045
FblI	GTMKAC	1 cut(s)	1518
FokI	GGATG	6 cut(s)	847, 952, 1102, 3209, 3303, 3416
FriOI	GRGCYC	6 cut(s)	235, 473, 594, 1819, 1842, 3372
GlaI	GCGC	5 cut(s)	143, 649, 651, 2346, 3529
GsaI	CCCAGC	2 cut(s)	1123, 2814
GsuI	CTGGAG	3 cut(s)	411, 1803, 1833
HaeIII	GGCC	6 cut(s)	160, 186, 227, 2018, 2691, 2949
HgaI	GACGC	1 cut(s)	429
HhaI	GCGC	5 cut(s)	144, 650, 652, 2347, 3530
Hin6I	GCGC	5 cut(s)	142, 648, 650, 2345, 3528
HinP1I	GCGC	5 cut(s)	142, 648, 650, 2345, 3528
HincII	GTYRAC	1 cut(s)	1285
HindII	GTYRAC	1 cut(s)	1285
HindIII	AAGCTT	3 cut(s)	1317, 1413, 1492
HphI	GGTGA	8 cut(s)	727, 917, 1185, 1421, 1683, 1738, 2533, 3371
Hpy166II	GTNNAC	6 cut(s)	1168, 1285, 1519, 2302, 3397, 3470
Hpy8I	GTNNAC	6 cut(s)	1168, 1285, 1519, 2302, 3397, 3470
Hpy99I	CGWCG	4 cut(s)	142, 220, 445, 1405
HpyAV	CCTTC	6 cut(s)	111, 166, 1457, 1888, 2476, 3370
HpyCH4III	ACNGT	5 cut(s)	1459, 2111, 2222, 3474, 3591
HpyCH4IV	ACGT	6 cut(s)	750, 1170, 2122, 2732, 2893, 3032
HpySE526I	ACGT	6 cut(s)	750, 1170, 2122, 2732, 2893, 3032
HspAI	GCGC	5 cut(s)	142, 648, 650, 2345, 3528
Kpn2I	TCCGGA	2 cut(s)	255, 269
KroI	GCCGGC	2 cut(s)	7, 110
KroNI	GCCGGC	2 cut(s)	9, 112
Ksp22I	TGATCA	2 cut(s)	730, 3045
KspI	CCGCGG	1 cut(s)	904
LguI	GCTCTTC	1 cut(s)	3480
MaeII	ACGT	6 cut(s)	750, 1170, 2122, 2732, 2893, 3032
MaeIII	GTNAC	6 cut(s)	310, 905, 1232, 1529, 1982, 2469
MflI	RGATCY	4 cut(s)	1342, 2005, 2182, 3073
MlyI	GAGTC	4 cut(s)	29, 272, 3449, 3608
MmeI	TCCRAC	2 cut(s)	423, 585
MreI	CGCCGGCG	1 cut(s)	7
MroI	TCCGGA	2 cut(s)	255, 269
MroNI	GCCGGC	2 cut(s)	7, 110
MroXI	GAANNNNTTC	1 cut(s)	2823
MslI	CAYNNNNRTG	3 cut(s)	92, 1134, 3402
MspA1I	CMGCKG	5 cut(s)	389, 903, 1123, 1943, 2906
MspR9I	CCNGG	3 cut(s)	229, 240, 894
Mva1269I	GAATGC	3 cut(s)	112, 724, 3543
MvaI	CCWGG	1 cut(s)	894
MvnI	CGCG	3 cut(s)	142, 650, 903
NaeI	GCCGGC	2 cut(s)	9, 112
NciI	CCSGG	2 cut(s)	229, 240
NdeI	CATATG	3 cut(s)	1777, 3439, 3613
NgoMIV	GCCGGC	2 cut(s)	7, 110
NmeAIII	GCCGAG	1 cut(s)	186
NmuCI	GTSAC	3 cut(s)	310, 905, 1529
NspI	RCATGY	1 cut(s)	1962
NspV	TTCGAA	2 cut(s)	104, 287
PagI	TCATGA	3 cut(s)	93, 1846, 3665
PauI	GCGCGC	1 cut(s)	648
PceI	AGGCCT	1 cut(s)	186
PciSI	GCTCTTC	1 cut(s)	3480
PcsI	WCGNNNNNNNCGW	1 cut(s)	345
PctI	GAATGC	3 cut(s)	112, 724, 3543
PdiI	GCCGGC	2 cut(s)	9, 112
PdmI	GAANNNNTTC	1 cut(s)	2823
PflFI	GACNNNGTC	1 cut(s)	3649
PflMI	CCANNNNNTGG	2 cut(s)	604, 1811
PinAI	ACCGGT	1 cut(s)	44
PleI	GAGTC	4 cut(s)	28, 272, 3449, 3607
PpsI	GAGTC	4 cut(s)	28, 272, 3449, 3607
Ppu21I	YACGTR	1 cut(s)	2123
PshBI	ATTAAT	1 cut(s)	624
Psp124BI	GAGCTC	2 cut(s)	594, 1819
Psp1406I	AACGTT	1 cut(s)	1170
Psp6I	CCWGG	1 cut(s)	892
PspEI	GGTNACC	2 cut(s)	1232, 1982
PspFI	CCCAGC	2 cut(s)	1119, 2810
PspGI	CCWGG	1 cut(s)	892
PspPI	GGNCC	3 cut(s)	175, 2302, 2689
PsrI	GAACNNNNNNTAC	4 cut(s)	367, 399, 1225, 1257
PstI	CTGCAG	3 cut(s)	1795, 1948, 3547
PstNI	CAGNNNCTG	1 cut(s)	3458
PsuI	RGATCY	4 cut(s)	1342, 2005, 2182, 3073
PsyI	GACNNNGTC	1 cut(s)	3649
PteI	GCGCGC	1 cut(s)	648
PvuII	CAGCTG	4 cut(s)	389, 1123, 1943, 2906
RsaI	GTAC	5 cut(s)	688, 1824, 2624, 3239, 3447
RsaNI	GTAC	5 cut(s)	687, 1823, 2623, 3238, 3446
RseI	CAYNNNNRTG	3 cut(s)	92, 1134, 3402
SacI	GAGCTC	2 cut(s)	594, 1819
SacII	CCGCGG	1 cut(s)	904
SapI	GCTCTTC	1 cut(s)	3480
Sau96I	GGNCC	3 cut(s)	175, 2302, 2689
ScaI	AGTACT	3 cut(s)	688, 1824, 3447
SchI	GAGTC	4 cut(s)	29, 272, 3449, 3608
ScrFI	CCNGG	3 cut(s)	229, 240, 894
SfcI	CTRYAG	6 cut(s)	972, 1791, 1944, 2101, 2985, 3543
Sfr303I	CCGCGG	1 cut(s)	904
SfuI	TTCGAA	2 cut(s)	104, 287
SgrAI	CRCCGGYG	1 cut(s)	7
SgrBI	CCGCGG	1 cut(s)	904
SinI	GGWCC	2 cut(s)	175, 2302
SmiMI	CAYNNNNRTG	3 cut(s)	92, 1134, 3402
SmlI	CTYRAG	1 cut(s)	2681
SmoI	CTYRAG	1 cut(s)	2681
SseBI	AGGCCT	1 cut(s)	186
SsiI	CCGC	8 cut(s)	581, 645, 901, 903, 2486, 2506, 2638, 3576
SspI	AATATT	2 cut(s)	463, 1153
SstI	GAGCTC	2 cut(s)	594, 1819
StuI	AGGCCT	1 cut(s)	186
StyD4I	CCNGG	3 cut(s)	227, 238, 892
StyI	CCWWGG	5 cut(s)	822, 2035, 2233, 2545, 3228
TaaI	ACNGT	5 cut(s)	1459, 2111, 2222, 3474, 3591
TaiI	ACGT	6 cut(s)	753, 1173, 2125, 2735, 2896, 3035
TaqI	TCGA	7 cut(s)	104, 155, 287, 426, 765, 1631, 1829
TatI	WGTACW	5 cut(s)	686, 1822, 2622, 3237, 3445
TauI	GCSGC	1 cut(s)	648
TscAI	CASTG	6 cut(s)	1839, 2094, 2962, 3134, 3523, 3596
TseFI	GTSAC	3 cut(s)	310, 905, 1529
Tsp45I	GTSAC	3 cut(s)	310, 905, 1529
TspGWI	ACGGA	1 cut(s)	240
TspRI	CASTG	6 cut(s)	1839, 2094, 2962, 3134, 3523, 3596
Tth111I	GACNNNGTC	1 cut(s)	3649
Van91I	CCANNNNNTGG	2 cut(s)	604, 1811
VneI	GTGCAC	2 cut(s)	3395, 3468
VpaK11BI	GGWCC	2 cut(s)	175, 2302
VspI	ATTAAT	1 cut(s)	624
XagI	CCTNNNNNAGG	1 cut(s)	2237
XapI	RAATTY	7 cut(s)	190, 289, 1034, 1252, 1851, 2139, 2751
XbaI	TCTAGA	1 cut(s)	2069
XceI	RCATGY	1 cut(s)	1962
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1122
XmiI	GTMKAC	1 cut(s)	1518
XmnI	GAANNNNTTC	1 cut(s)	2823
ZrmI	AGTACT	3 cut(s)	688, 1824, 3447

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.