Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr03

Orthogroup ID

OG0004583

Physical Location & Seq

Genomic Coordinates Forward (+)

23256139 .. 23265482

Gene Structure 9344 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD03G1171300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2100 bp

ATGTTTTCAGCGGCGCGTATCCTCCTACCGGTGTCACTGTCAGTGCTGGTCTTAATTTATAAGTACTTCAGATCCGGACGGGAATCGGAACCTTCTGAAGGTGTCGATCCTGAAATCCTTCATTGGATTCGGACACTCGACCCCGCCGTGCTCAATAGGATTAGGAATGGCGACCCTGCCCTCCTCGAAGTGATTCGGAACTTGGACCCTGCTTTCCCTTCGGAATTTTCTGGAAGCGTCGACGGTCCTCTAAATCCGCCGTCTGTTCCGTCTCCTGCGCCGGGAAGTTCAGAAAATAGAAGTGGGTCTAACCTCACCTTAGCTGCCTCTTCCGCTGCTCAAAGTCAAGTATCTGCGTCAAAAGGCCTCCAGAAAAAGAAAAGTCTGGTAAAGGCTGGACATTATCAGAAAAAAGAGTCATCTATCCCACAACCCAGGCATGGAGATAATACCGGAGTGCGTAAGGAACAGGAGATAAAGCAAGAATCTATTTCTTTGTCTGCTGAAGCAGCTGCAGCTCAGGAAGCATGTGAAAATTGGCGACTAAGGGGAAACCAAGCGTACAAAAATGGGGATATGTCTAAAGCTGAGGACTGCTACACACAAGGAGTGAATTGCGTTTCTACAAATGTGACATCTAGAAGCTCTCTTAGGGCATTGATGCTGTGCTATAGCAACCGTGCAGCAACACGTATGGCTCTTGGAAGAATAAGAGATGCACTTGGGGACTGTATGATGGCTACTGCAATTGATCCCAACTTCCTCAAAGTGCAGGTTAGAGCTTCCAAATGTTATCTTGCTCTTGGGGAAGTTGAAGATGCTTCACAACATTTTAGGAGGTGCCTGCAATTAGCAAATGATATCTGTTTGGACCGAAAGATTGCAAAAGAAGCTTCTGATGGCTTACAAAAAGCACAGGAAGTGTCTGAATGCCTGAATCATTGTGCTGAACTTTTGCCATGGAAAACATCTACGAATGCCGAGCGTGCTATACAACTTATTGATGAAGGTTTGGTAATAAGTCCTAGCTCAGAAAAATTACTTGAAATGAAAGCAGAGGCTCTTTTTGCGGTGCGGAGGTATGAAGAGGTGATTGAGCTGTGTGCGCAGACCCTGAGTTCTGTGGAAAAGAACAACCTTCCAGCAGATGACCAGGTCTCTGCAGATAATTCCGAACTCTCAAAGTACTTTTACTTCAGACTCTGGCGGTGCCGTATGATTTTTAAATCCTATTTTTATCTTGGAAAACTAGAGGAGGGTCTTGCTACACTAGATAAACATGAGGAAAAGATGTCTACCTCATATAGGAATCGGAGAACAACTCTGCAATCATCAGAACCCCTTGTTCTCGTTGTACGTAAACTTCTGTCTCATAAGGTTGCAGGGAATGAATCATTTCAGGCTGGAAGACATACTGAAGCTGTTGAGCATTATACTACTGCTTTGTGCTGCAATGTTGAATCACGTCCATTTACAGCTGTTTGTTTTTGCAATCGTGCTGCTGCATACAAAGCATTGGGCCGGATTACTGATGCTATTGCTGATTGCAGTTTAGCTATAGCTCTTGATGGAAATTATCTAAAGGCTATTTCTGGAAGAGCCTCATTATACAAGATGATCAGATATTATGGAGAAGCCGCTAAAGATCTTCGGAGACTGGTATCTATTCTCACTAAGCAGGAAGAGGAAAAAATTTATCTGTGTAGAACATCTGACAGATCCATTAGCGGCACAAATGTCCTGACACAAGCTCGTCTTCATCTTTCTAAAATAGAAGAAAAGGACAGAAAGGACATCCCCTTGGATATGTACCTTATTCTGGGAGTTGAACCATCTGTTTCGGCATCAGAAATCAAGAAGGCCTATCTGAAAGCTGCACTTCGACATCATCCTGACAAGGCTGGTCAATTCTTTTCAAGGAGCGATAATGGGTGTTGGAAGGAGATAGCAGAAGAAGTGCACAAGGATGCTGACAGGCTTTTTAAAATGATTGGGGAGGCATATGCAGTACTTTCAGACCCAACCAAGCGTGCAAGGTATGGCACCGAAGAGGAGATGAGGAATGCACAAAAGAAACGCAGTGGAAGCAGCACATCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001671 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0006457 GO:0006458 GO:0008047 GO:0008150 GO:0009987 GO:0030234 GO:0031072 GO:0031974 GO:0031981 GO:0032781 GO:0043085 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043462 GO:0044093 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0048583 GO:0050789 GO:0050790 GO:0050794 GO:0051084 GO:0051085 GO:0051336 GO:0051345 GO:0060589 GO:0060590 GO:0061077 GO:0065007 GO:0065009 GO:0070013 GO:0080134 GO:0080135 GO:0098772 GO:1900034

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DnaJ TPR_8

Protein Analysis

700

Amino Acids

77.78

Weight (kDa)

8.66

Isoelectric Point (pI)

50.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DnaJ	PF00226	602 - 680	1.9e-15	DnaJ domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004583)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G12430
fragaria_vesca	FvH4_3g28360 FvH4_3g28360 FvH4_3g28360 FvH4_3g28360
malus_domestica	MD03G1171100.v1.1 MD03G1171300.v1.1 MD11G1188500.v1.1 MD11G1188700.v1.1
prunus_persica	Prupe.4G255700_v2.0.a1 Prupe.4G255700_v2.0.a1 Prupe.4G255700_v2.0.a1 Prupe.4G255700_v2.0.a1
pyrus_communis	pycom03g12820 pycom03g12830 pycom03g12840 pycom03g12860 pycom11g16530 pycom15g27190
rosa_chinensis	RchiOBHm_Chr5g0053371
rosa_laevigata	RLG00000034766
rosa_multiflora	Rmu_sc0001966.1_g000003
rosa_roxburghii	Rroxscaffold_1G00029100
rosa_rugosa	Rorug05G0267200 Rorug05G0267300
rosa_samantha	Rh5AG339800 Rh5BG350200 Rh5CG376600 Rh5DG364200
rosa_wichuraiana	Rw5G032070 Rw5G032080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	60
Acc16I	TGCGCA	1 cut(s)	1107
Acc36I	ACCTGC	1 cut(s)	763
AccB1I	GGYRCC	3 cut(s)	840, 1209, 2042
AccI	GTMKAC	2 cut(s)	240, 1295
AccII	CGCG	1 cut(s)	16
AccIII	TCCGGA	1 cut(s)	74
AciI	CCGC	9 cut(s)	11, 144, 257, 333, 1070, 1075, 1207, 1638, 1728
AclWI	GGATC	4 cut(s)	66, 101, 746, 1713
AcsI	RAATTY	2 cut(s)	224, 1692
AcuI	CTGAAG	5 cut(s)	52, 117, 525, 1180, 1437
AfaI	GTAC	6 cut(s)	65, 563, 1187, 1356, 1811, 2010
AfiI	CCNNNNNNNGG	6 cut(s)	28, 98, 281, 440, 1305, 1819
AflIII	ACRYGT	1 cut(s)	689
AgeI	ACCGGT	1 cut(s)	28
AgsI	TTSAA	5 cut(s)	815, 1046, 1460, 1829, 1917
AjiI	CACGTC	1 cut(s)	1466
AjnI	CCWGG	2 cut(s)	434, 1152
Alw21I	GWGCWC	2 cut(s)	153, 1962
Alw26I	GTCTC	4 cut(s)	276, 1162, 1374, 1648
Alw44I	GTGCAC	1 cut(s)	1958
AlwI	GGATC	4 cut(s)	66, 101, 746, 1713
AlwNI	CAGNNNCTG	2 cut(s)	1114, 1203
Aor13HI	TCCGGA	1 cut(s)	74
AoxI	GGCC	3 cut(s)	364, 1519, 1860
ApaLI	GTGCAC	1 cut(s)	1958
ApoI	RAATTY	2 cut(s)	224, 1692
AsiGI	ACCGGT	1 cut(s)	28
Asp700I	GAANNNNTTC	3 cut(s)	117, 192, 1395
AspLEI	GCGC	3 cut(s)	16, 280, 1108
AspS9I	GGNCC	4 cut(s)	205, 245, 871, 1519
AsuC2I	CCSGG	1 cut(s)	282
AsuHPI	GGTGA	2 cut(s)	307, 1102
AvaII	GGWCC	3 cut(s)	205, 245, 871
BaeGI	GKGCMC	1 cut(s)	1962
BanI	GGYRCC	3 cut(s)	840, 1209, 2042
BarI	GAAGNNNNNNTAC	4 cut(s)	1178, 1210, 1347, 1379
BbsI	GAAGAC	2 cut(s)	1414, 1748
Bbv12I	GWGCWC	2 cut(s)	153, 1962
BbvCI	CCTCAGC	1 cut(s)	588
BccI	CCATC	4 cut(s)	730, 893, 1562, 1840
BceAI	ACGGC	3 cut(s)	131, 244, 1197
BciT130I	CCWGG	2 cut(s)	436, 1154
BciVI	GTATCC	1 cut(s)	29
BclI	TGATCA	1 cut(s)	1617
BcnI	CCSGG	1 cut(s)	282
BcoDI	GTCTC	4 cut(s)	276, 1162, 1374, 1648
BfaI	CTAG	4 cut(s)	639, 1026, 1250, 1271
BfmI	CTRYAG	4 cut(s)	513, 670, 1161, 1557
BfuAI	ACCTGC	1 cut(s)	763
BfuI	GTATCC	1 cut(s)	29
BglII	AGATCT	1 cut(s)	1645
BmcAI	AGTACT	3 cut(s)	65, 1187, 2010
Bme1390I	CCNGG	3 cut(s)	282, 436, 1154
Bme18I	GGWCC	3 cut(s)	205, 245, 871
BmgBI	CACGTC	1 cut(s)	1466
BmgT120I	GGNCC	4 cut(s)	205, 245, 871, 1519
BmiI	GGNNCC	5 cut(s)	90, 207, 842, 1211, 2044
BmrFI	CCNGG	3 cut(s)	282, 436, 1154
BmsI	GCATC	6 cut(s)	651, 706, 808, 1522, 1853, 1957
BpiI	GAAGAC	2 cut(s)	1414, 1748
BplI	GAGNNNNNCTC	2 cut(s)	1306, 1338
BpmI	CTGGAG	1 cut(s)	353
Bpu10I	CCTNAGC	3 cut(s)	319, 519, 588
BpuMI	CCSGG	1 cut(s)	282
BsaAI	YACGTR	2 cut(s)	692, 1358
BsaI	GGTCTC	1 cut(s)	1162
BsaJI	CCNNGG	3 cut(s)	434, 959, 1800
BsaWI	WCCGGW	3 cut(s)	28, 74, 452
Bsc4I	CCNNNNNNNGG	6 cut(s)	28, 98, 281, 440, 1305, 1819
Bse118I	RCCGGY	1 cut(s)	28
Bse1I	ACTGG	1 cut(s)	1662
Bse3DI	GCAATG	1 cut(s)	1459
BseAI	TCCGGA	1 cut(s)	74
BseBI	CCWGG	2 cut(s)	436, 1154
BseDI	CCNNGG	3 cut(s)	434, 959, 1800
BseGI	GGATG	3 cut(s)	1794, 1888, 1972
BseLI	CCNNNNNNNGG	6 cut(s)	28, 98, 281, 440, 1305, 1819
BseMI	GCAATG	1 cut(s)	1459
BseMII	CTCAG	4 cut(s)	533, 579, 1044, 1106
BseNI	ACTGG	1 cut(s)	1662
BseRI	GAGGAG	3 cut(s)	173, 1268, 2066
BseSI	GKGCMC	1 cut(s)	1962
BsgI	GTGCAG	3 cut(s)	702, 791, 1860
Bsh1236I	CGCG	1 cut(s)	16
BshFI	GGCC	3 cut(s)	366, 1521, 1862
BshNI	GGYRCC	3 cut(s)	840, 1209, 2042
BshTI	ACCGGT	1 cut(s)	28
BsiHKAI	GWGCWC	2 cut(s)	153, 1962
BsiSI	CCGG	5 cut(s)	29, 75, 281, 453, 1522
BslFI	GGGAC	1 cut(s)	740
BslI	CCNNNNNNNGG	6 cut(s)	28, 98, 281, 440, 1305, 1819
BsmAI	GTCTC	4 cut(s)	276, 1162, 1374, 1648
BsmBI	CGTCTC	1 cut(s)	276
BsmFI	GGGAC	1 cut(s)	740
BsmI	GAATGC	3 cut(s)	935, 982, 2068
BsnI	GGCC	3 cut(s)	366, 1521, 1862
Bso31I	GGTCTC	1 cut(s)	1162
Bsp1286I	GDGCHC	2 cut(s)	153, 1962
Bsp13I	TCCGGA	1 cut(s)	74
Bsp143I	GATC	6 cut(s)	71, 106, 751, 1617, 1645, 1718
Bsp19I	CCATGG	1 cut(s)	959
BspACI	CCGC	9 cut(s)	11, 144, 257, 333, 1070, 1075, 1207, 1638, 1728
BspANI	GGCC	3 cut(s)	366, 1521, 1862
BspCNI	CTCAG	4 cut(s)	532, 580, 1043, 1107
BspEI	TCCGGA	1 cut(s)	74
BspFNI	CGCG	1 cut(s)	16
BspLI	GGNNCC	5 cut(s)	90, 207, 842, 1211, 2044
BspMAI	CTGCAG	2 cut(s)	517, 1165
BspMI	ACCTGC	1 cut(s)	763
BspPI	GGATC	4 cut(s)	66, 101, 746, 1713
BspQI	GCTCTTC	1 cut(s)	1591
BspT107I	GGYRCC	3 cut(s)	840, 1209, 2042
BspTNI	GGTCTC	1 cut(s)	1162
BsrDI	GCAATG	1 cut(s)	1459
BsrFI	RCCGGY	1 cut(s)	28
BsrI	ACTGG	1 cut(s)	1662
BssAI	RCCGGY	1 cut(s)	28
BssECI	CCNNGG	3 cut(s)	434, 959, 1800
BssMI	GATC	6 cut(s)	71, 106, 751, 1617, 1645, 1718
BssT1I	CCWWGG	2 cut(s)	959, 1800
Bst2UI	CCWGG	2 cut(s)	436, 1154
Bst4CI	ACNGT	4 cut(s)	39, 245, 680, 731
Bst6I	CTCTTC	5 cut(s)	334, 1080, 1591, 1677, 2043
BstBAI	YACGTR	2 cut(s)	692, 1358
BstC8I	GCNNGC	3 cut(s)	845, 987, 2031
BstDEI	CTNAG	8 cut(s)	319, 519, 545, 588, 650, 1030, 1115, 1674
BstDSI	CCRYGG	1 cut(s)	959
BstENI	CCTNNNNNAGG	2 cut(s)	96, 1303
BstF5I	GGATG	3 cut(s)	1794, 1888, 1972
BstFNI	CGCG	1 cut(s)	16
BstHHI	GCGC	3 cut(s)	16, 280, 1108
BstKTI	GATC	6 cut(s)	74, 109, 754, 1620, 1648, 1721
BstMAI	GTCTC	4 cut(s)	276, 1162, 1374, 1648
BstMBI	GATC	6 cut(s)	71, 106, 751, 1617, 1645, 1718
BstNI	CCWGG	2 cut(s)	436, 1154
BstNSI	RCATGY	1 cut(s)	531
BstSCI	CCNGG	3 cut(s)	280, 434, 1152
BstSFI	CTRYAG	4 cut(s)	513, 670, 1161, 1557
BstSLI	GKGCMC	1 cut(s)	1962
BstSNI	TACGTA	1 cut(s)	1358
BstUI	CGCG	1 cut(s)	16
BstV2I	GAAGAC	2 cut(s)	1414, 1748
BstX2I	RGATCY	3 cut(s)	71, 1645, 1718
BstYI	RGATCY	3 cut(s)	71, 1645, 1718
BsuI	GTATCC	1 cut(s)	29
BsuRI	GGCC	3 cut(s)	366, 1521, 1862
BtgI	CCRYGG	1 cut(s)	959
BtrI	CACGTC	1 cut(s)	1466
BtsCI	GGATG	3 cut(s)	1794, 1888, 1972
BtsI	GCAGTG	1 cut(s)	2086
BtsIMutI	CAGTG	3 cut(s)	35, 48, 2086
BveI	ACCTGC	1 cut(s)	763
Cac8I	GCNNGC	3 cut(s)	845, 987, 2031
CaiI	CAGNNNCTG	2 cut(s)	1114, 1203
CfoI	GCGC	3 cut(s)	16, 280, 1108
Cfr10I	RCCGGY	1 cut(s)	28
Cfr13I	GGNCC	4 cut(s)	205, 245, 871, 1519
CseI	GACGC	2 cut(s)	226, 345
CsiI	ACCWGGT	1 cut(s)	1152
Csp6I	GTAC	6 cut(s)	64, 562, 1186, 1355, 1810, 2009
CspAI	ACCGGT	1 cut(s)	28
CviAII	CATG	4 cut(s)	440, 528, 960, 1280
CviQI	GTAC	6 cut(s)	64, 562, 1186, 1355, 1810, 2009
DdeI	CTNAG	8 cut(s)	319, 519, 545, 588, 650, 1030, 1115, 1674
DpnI	GATC	6 cut(s)	73, 108, 753, 1619, 1647, 1720
DpnII	GATC	6 cut(s)	71, 106, 751, 1617, 1645, 1718
DraI	TTTAAA	2 cut(s)	1225, 1984
Eam1104I	CTCTTC	5 cut(s)	334, 1080, 1591, 1677, 2043
EarI	CTCTTC	5 cut(s)	334, 1080, 1591, 1677, 2043
EciI	GGCGGA	1 cut(s)	246
Eco105I	TACGTA	1 cut(s)	1358
Eco130I	CCWWGG	2 cut(s)	959, 1800
Eco147I	AGGCCT	2 cut(s)	366, 1862
Eco31I	GGTCTC	1 cut(s)	1162
Eco32I	GATATC	1 cut(s)	862
Eco47I	GGWCC	3 cut(s)	205, 245, 871
Eco57I	CTGAAG	5 cut(s)	52, 117, 525, 1180, 1437
EcoNI	CCTNNNNNAGG	2 cut(s)	96, 1303
EcoRII	CCWGG	2 cut(s)	434, 1152
EcoRV	GATATC	1 cut(s)	862
EcoT14I	CCWWGG	2 cut(s)	959, 1800
ErhI	CCWWGG	2 cut(s)	959, 1800
Esp3I	CGTCTC	1 cut(s)	276
FaeI	CATG	4 cut(s)	443, 531, 963, 1283
FalI	AAGNNNNNCTT	4 cut(s)	1740, 1772, 1863, 1895
FaqI	GGGAC	1 cut(s)	740
FatI	CATG	4 cut(s)	439, 527, 959, 1279
FauI	CCCGC	1 cut(s)	151
FauNDI	CATATG	1 cut(s)	2002
FbaI	TGATCA	1 cut(s)	1617
FblI	GTMKAC	2 cut(s)	240, 1295
FokI	GGATG	3 cut(s)	1781, 1875, 1979
FspBI	CTAG	4 cut(s)	639, 1026, 1250, 1271
FspI	TGCGCA	1 cut(s)	1107
GlaI	GCGC	3 cut(s)	15, 279, 1107
GsuI	CTGGAG	1 cut(s)	353
HaeIII	GGCC	3 cut(s)	366, 1521, 1862
HapII	CCGG	5 cut(s)	29, 75, 281, 453, 1522
HgaI	GACGC	2 cut(s)	226, 345
HhaI	GCGC	3 cut(s)	16, 280, 1108
Hin1II	CATG	4 cut(s)	443, 531, 963, 1283
Hin6I	GCGC	3 cut(s)	14, 278, 1106
HinP1I	GCGC	3 cut(s)	14, 278, 1106
HincII	GTYRAC	1 cut(s)	241
HindII	GTYRAC	1 cut(s)	241
HindIII	AAGCTT	1 cut(s)	891
HpaII	CCGG	5 cut(s)	29, 75, 281, 453, 1522
HphI	GGTGA	2 cut(s)	307, 1102
Hpy166II	GTNNAC	4 cut(s)	241, 1296, 1361, 1960
Hpy8I	GTNNAC	4 cut(s)	241, 1296, 1361, 1960
Hpy99I	CGWCG	2 cut(s)	242, 245
HpyAV	CCTTC	8 cut(s)	92, 102, 128, 228, 1001, 1148, 1852, 1933
HpyCH4III	ACNGT	4 cut(s)	39, 245, 680, 731
HpyCH4IV	ACGT	3 cut(s)	691, 1357, 1465
HpyF3I	CTNAG	8 cut(s)	319, 519, 545, 588, 650, 1030, 1115, 1674
HpySE526I	ACGT	3 cut(s)	691, 1357, 1465
Hsp92II	CATG	4 cut(s)	443, 531, 963, 1283
HspAI	GCGC	3 cut(s)	14, 278, 1106
Kpn2I	TCCGGA	1 cut(s)	74
Ksp22I	TGATCA	1 cut(s)	1617
Kzo9I	GATC	6 cut(s)	71, 106, 751, 1617, 1645, 1718
LguI	GCTCTTC	1 cut(s)	1591
LmnI	GCTCC	1 cut(s)	1920
LweI	GCATC	6 cut(s)	651, 706, 808, 1522, 1853, 1957
MabI	ACCWGGT	1 cut(s)	1152
MaeI	CTAG	4 cut(s)	639, 1026, 1250, 1271
MaeII	ACGT	3 cut(s)	691, 1357, 1465
MaeIII	GTNAC	2 cut(s)	33, 631
MalI	GATC	6 cut(s)	73, 108, 753, 1619, 1647, 1720
MboI	GATC	6 cut(s)	71, 106, 751, 1617, 1645, 1718
MfeI	CAATTG	1 cut(s)	747
MflI	RGATCY	3 cut(s)	71, 1645, 1718
MhlI	GDGCHC	2 cut(s)	153, 1962
MlyI	GAGTC	2 cut(s)	425, 1194
MmeI	TCCRAC	1 cut(s)	1916
MroI	TCCGGA	1 cut(s)	74
MroXI	GAANNNNTTC	3 cut(s)	117, 192, 1395
MseI	TTAA	3 cut(s)	53, 1224, 1983
MslI	CAYNNNNRTG	1 cut(s)	1965
MspA1I	CMGCKG	4 cut(s)	11, 335, 512, 1478
MspI	CCGG	5 cut(s)	29, 75, 281, 453, 1522
MspR9I	CCNGG	3 cut(s)	282, 436, 1154
MunI	CAATTG	1 cut(s)	747
Mva1269I	GAATGC	3 cut(s)	935, 982, 2068
MvaI	CCWGG	2 cut(s)	436, 1154
MvnI	CGCG	1 cut(s)	16
NciI	CCSGG	1 cut(s)	282
NcoI	CCATGG	1 cut(s)	959
NdeI	CATATG	1 cut(s)	2002
NdeII	GATC	6 cut(s)	71, 106, 751, 1617, 1645, 1718
NlaIII	CATG	4 cut(s)	443, 531, 963, 1283
NlaIV	GGNNCC	5 cut(s)	90, 207, 842, 1211, 2044
NmeAIII	GCCGAG	1 cut(s)	1006
NmuCI	GTSAC	2 cut(s)	33, 631
NsbI	TGCGCA	1 cut(s)	1107
NspI	RCATGY	1 cut(s)	531
PceI	AGGCCT	2 cut(s)	366, 1862
PciSI	GCTCTTC	1 cut(s)	1591
PcsI	WCGNNNNNNNCGW	1 cut(s)	144
PctI	GAATGC	3 cut(s)	935, 982, 2068
PdmI	GAANNNNTTC	3 cut(s)	117, 192, 1395
PfeI	GAWTC	8 cut(s)	83, 127, 193, 485, 937, 1309, 1391, 1460
PflFI	GACNNNGTC	1 cut(s)	1154
PinAI	ACCGGT	1 cut(s)	28
PleI	GAGTC	2 cut(s)	424, 1194
PpsI	GAGTC	2 cut(s)	424, 1194
Ppu21I	YACGTR	2 cut(s)	692, 1358
PsiI	TTATAA	1 cut(s)	60
Psp6I	CCWGG	2 cut(s)	434, 1152
PspGI	CCWGG	2 cut(s)	434, 1152
PspN4I	GGNNCC	5 cut(s)	90, 207, 842, 1211, 2044
PspPI	GGNCC	4 cut(s)	205, 245, 871, 1519
PstI	CTGCAG	2 cut(s)	517, 1165
PstNI	CAGNNNCTG	2 cut(s)	1114, 1203
PsuI	RGATCY	3 cut(s)	71, 1645, 1718
PsyI	GACNNNGTC	1 cut(s)	1154
PvuII	CAGCTG	2 cut(s)	512, 1478
RsaI	GTAC	6 cut(s)	65, 563, 1187, 1356, 1811, 2010
RsaNI	GTAC	6 cut(s)	64, 562, 1186, 1355, 1810, 2009
RseI	CAYNNNNRTG	1 cut(s)	1965
SalI	GTCGAC	1 cut(s)	239
SapI	GCTCTTC	1 cut(s)	1591
SaqAI	TTAA	3 cut(s)	53, 1224, 1983
Sau3AI	GATC	6 cut(s)	71, 106, 751, 1617, 1645, 1718
Sau96I	GGNCC	4 cut(s)	205, 245, 871, 1519
ScaI	AGTACT	3 cut(s)	65, 1187, 2010
SchI	GAGTC	2 cut(s)	425, 1194
ScrFI	CCNGG	3 cut(s)	282, 436, 1154
SduI	GDGCHC	2 cut(s)	153, 1962
SexAI	ACCWGGT	1 cut(s)	1152
SfaNI	GCATC	6 cut(s)	651, 706, 808, 1522, 1853, 1957
SfcI	CTRYAG	4 cut(s)	513, 670, 1161, 1557
SgrDI	CGTCGACG	1 cut(s)	239
SinI	GGWCC	3 cut(s)	205, 245, 871
SmiMI	CAYNNNNRTG	1 cut(s)	1965
SnaBI	TACGTA	1 cut(s)	1358
SseBI	AGGCCT	2 cut(s)	366, 1862
SsiI	CCGC	9 cut(s)	11, 144, 257, 333, 1070, 1075, 1207, 1638, 1728
SspMI	CTAG	4 cut(s)	639, 1026, 1250, 1271
StuI	AGGCCT	2 cut(s)	366, 1862
StyD4I	CCNGG	3 cut(s)	280, 434, 1152
StyI	CCWWGG	2 cut(s)	959, 1800
TaaI	ACNGT	4 cut(s)	39, 245, 680, 731
TaiI	ACGT	3 cut(s)	694, 1360, 1468
TaqI	TCGA	5 cut(s)	105, 138, 186, 240, 1882
TaqII	GACCGA	1 cut(s)	888
TatI	WGTACW	3 cut(s)	63, 1185, 2008
TauI	GCSGC	3 cut(s)	14, 1640, 1731
TfiI	GAWTC	8 cut(s)	83, 127, 193, 485, 937, 1309, 1391, 1460
Tru1I	TTAA	3 cut(s)	53, 1224, 1983
Tru9I	TTAA	3 cut(s)	53, 1224, 1983
TscAI	CASTG	3 cut(s)	42, 48, 2086
TseFI	GTSAC	2 cut(s)	33, 631
Tsp45I	GTSAC	2 cut(s)	33, 631
TspDTI	ATGAA	6 cut(s)	110, 1020, 1064, 1098, 1404, 1748
TspGWI	ACGGA	1 cut(s)	258
TspRI	CASTG	3 cut(s)	42, 48, 2086
Tth111I	GACNNNGTC	1 cut(s)	1154
VneI	GTGCAC	1 cut(s)	1958
VpaK11BI	GGWCC	3 cut(s)	205, 245, 871
XagI	CCTNNNNNAGG	2 cut(s)	96, 1303
XapI	RAATTY	2 cut(s)	224, 1692
XbaI	TCTAGA	1 cut(s)	638
XceI	RCATGY	1 cut(s)	531
XmiI	GTMKAC	2 cut(s)	240, 1295
XmnI	GAANNNNTTC	3 cut(s)	117, 192, 1395
XspI	CTAG	4 cut(s)	639, 1026, 1250, 1271
ZrmI	AGTACT	3 cut(s)	65, 1187, 2010

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.