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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G03130 AT5G17160 |
| fragaria_vesca | FvH4_1g07490 FvH4_2g06690 FvH4_2g06700 FvH4_5g14120 FvH4_7g33621 FvH4_7g33621 FvH4_7g33621 FvH4_7g33621 |
| malus_domestica | MD01G1233900.v1.1 MD07G1306000.v1.1 |
| prunus_persica | Prupe.2G324100_v2.0.a1 |
| pyrus_communis | pycom01g24220 pycom07g27920 |
| rosa_chinensis | RchiOBHm_Chr1g0383881 RchiOBHm_Chr4g0397811 |
| rosa_laevigata | RLG00000009396 RLG00000013940 RLG00000026089 |
| rosa_multiflora | Rmu_co8173668.1_g000001 Rmu_co8232707.1_g000001 Rmu_sc0002148.1_g000005 Rmu_sc0002321.1_g000010 Rmu_sc0002321.1_g000020 Rmu_sc0002378.1_g000002 Rmu_sc0005139.1_g000031 Rmu_sc0012471.1_g000003 Rmu_sc0013807.1_g000006 Rmu_sc0020611.1_g000016 Rmu_sc0028224.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00277180 Rroxscaffold_5G00342610 |
| rosa_rugosa | Rorug01G0442700 |
| rosa_samantha | Rh1AG468700 Rh1BG426400 Rh1CG439100 Rh1DG459200 Rh4CG087100 Rh4CG091100 |
| rosa_wichuraiana | Rw1G040370 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 292 |
| Acc36I | ACCTGC | 2 cut(s) | 562, 1666 |
| AccI | GTMKAC | 3 cut(s) | 468, 813, 1002 |
| AciI | CCGC | 2 cut(s) | 161, 1283 |
| AclI | AACGTT | 2 cut(s) | 830, 978 |
| AclWI | GGATC | 3 cut(s) | 36, 1279, 1315 |
| AcoI | YGGCCR | 1 cut(s) | 510 |
| AcsI | RAATTY | 1 cut(s) | 1336 |
| AcuI | CTGAAG | 3 cut(s) | 405, 1263, 1487 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 401 |
| AgsI | TTSAA | 7 cut(s) | 35, 374, 526, 679, 1092, 1355, 1600 |
| AjnI | CCWGG | 4 cut(s) | 315, 488, 631, 1684 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 437, 469 |
| AluBI | AGCT | 8 cut(s) | 65, 187, 239, 701, 801, 986, 1247, 1471 |
| AluI | AGCT | 8 cut(s) | 65, 187, 239, 701, 801, 986, 1247, 1471 |
| Alw21I | GWGCWC | 2 cut(s) | 160, 387 |
| Alw26I | GTCTC | 4 cut(s) | 300, 941, 1046, 1151 |
| AlwI | GGATC | 3 cut(s) | 36, 1279, 1315 |
| AoxI | GGCC | 3 cut(s) | 510, 744, 837 |
| ApeKI | GCWGC | 4 cut(s) | 187, 398, 425, 1322 |
| ApoI | RAATTY | 1 cut(s) | 1336 |
| AspS9I | GGNCC | 4 cut(s) | 313, 457, 854, 1168 |
| AsuHPI | GGTGA | 6 cut(s) | 632, 1072, 1097, 1332, 1588, 1645 |
| AsuII | TTCGAA | 1 cut(s) | 1253 |
| AvaII | GGWCC | 4 cut(s) | 313, 457, 854, 1168 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1368, 1401 |
| BbsI | GAAGAC | 3 cut(s) | 230, 359, 533 |
| Bbv12I | GWGCWC | 2 cut(s) | 160, 387 |
| BbvCI | CCTCAGC | 1 cut(s) | 246 |
| BbvI | GCAGC | 4 cut(s) | 174, 410, 437, 1309 |
| BccI | CCATC | 4 cut(s) | 113, 259, 848, 1624 |
| BceAI | ACGGC | 3 cut(s) | 789, 1246, 1247 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1061, 1095 |
| BciT130I | CCWGG | 4 cut(s) | 317, 490, 633, 1686 |
| BclI | TGATCA | 1 cut(s) | 874 |
| BcoDI | GTCTC | 4 cut(s) | 300, 941, 1046, 1151 |
| BfaI | CTAG | 4 cut(s) | 207, 357, 477, 983 |
| BfmI | CTRYAG | 2 cut(s) | 469, 1701 |
| BfuAI | ACCTGC | 2 cut(s) | 562, 1666 |
| BglII | AGATCT | 2 cut(s) | 706, 889 |
| BisI | GCNGC | 4 cut(s) | 188, 399, 426, 1323 |
| BlpI | GCTNAGC | 2 cut(s) | 240, 1044 |
| BlsI | GCNGC | 4 cut(s) | 189, 400, 427, 1324 |
| Bme1390I | CCNGG | 4 cut(s) | 317, 490, 633, 1686 |
| Bme18I | GGWCC | 4 cut(s) | 313, 457, 854, 1168 |
| BmgT120I | GGNCC | 4 cut(s) | 313, 457, 854, 1168 |
| BmrFI | CCNGG | 4 cut(s) | 317, 490, 633, 1686 |
| BmsI | GCATC | 4 cut(s) | 82, 721, 1030, 1069 |
| BpiI | GAAGAC | 3 cut(s) | 230, 359, 533 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 280, 312, 1106, 1138 |
| BpmI | CTGGAG | 4 cut(s) | 324, 378, 723, 1643 |
| Bpu10I | CCTNAGC | 1 cut(s) | 246 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 240, 1044 |
| Bpu14I | TTCGAA | 1 cut(s) | 1253 |
| BpuEI | CTTGAG | 3 cut(s) | 128, 327, 731 |
| Bsa29I | ATCGAT | 1 cut(s) | 1584 |
| BsaJI | CCNNGG | 4 cut(s) | 84, 631, 654, 1685 |
| BsaWI | WCCGGW | 1 cut(s) | 1198 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 879, 909 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 401 |
| Bse1I | ACTGG | 6 cut(s) | 153, 174, 460, 613, 1626, 1656 |
| Bse3DI | GCAATG | 1 cut(s) | 367 |
| BseBI | CCWGG | 4 cut(s) | 317, 490, 633, 1686 |
| BseCI | ATCGAT | 1 cut(s) | 1584 |
| BseDI | CCNNGG | 4 cut(s) | 84, 631, 654, 1685 |
| BseGI | GGATG | 3 cut(s) | 454, 736, 1291 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 401 |
| BseMI | GCAATG | 1 cut(s) | 367 |
| BseMII | CTCAG | 9 cut(s) | 231, 260, 272, 509, 783, 936, 1035, 1122, 1239 |
| BseNI | ACTGG | 6 cut(s) | 153, 174, 460, 613, 1626, 1656 |
| BseRI | GAGGAG | 2 cut(s) | 1335, 1568 |
| BseXI | GCAGC | 4 cut(s) | 174, 410, 437, 1309 |
| BseYI | CCCAGC | 1 cut(s) | 61 |
| BsgI | GTGCAG | 1 cut(s) | 573 |
| BshFI | GGCC | 3 cut(s) | 512, 746, 839 |
| BshVI | ATCGAT | 1 cut(s) | 1584 |
| BsiHKAI | GWGCWC | 2 cut(s) | 160, 387 |
| BsiSI | CCGG | 1 cut(s) | 1199 |
| BslFI | GGGAC | 1 cut(s) | 253 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 401 |
| BsmAI | GTCTC | 4 cut(s) | 300, 941, 1046, 1151 |
| BsmFI | GGGAC | 1 cut(s) | 253 |
| BsmI | GAATGC | 1 cut(s) | 163 |
| BsnI | GGCC | 3 cut(s) | 512, 746, 839 |
| Bsp119I | TTCGAA | 1 cut(s) | 1253 |
| Bsp1286I | GDGCHC | 2 cut(s) | 160, 387 |
| Bsp143I | GATC | 9 cut(s) | 28, 482, 514, 706, 874, 889, 1137, 1271, 1307 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 240, 1044 |
| Bsp19I | CCATGG | 2 cut(s) | 84, 654 |
| BspACI | CCGC | 2 cut(s) | 161, 1283 |
| BspANI | GGCC | 3 cut(s) | 512, 746, 839 |
| BspCNI | CTCAG | 9 cut(s) | 232, 259, 271, 510, 784, 937, 1036, 1123, 1238 |
| BspDI | ATCGAT | 1 cut(s) | 1584 |
| BspMAI | CTGCAG | 1 cut(s) | 1705 |
| BspMI | ACCTGC | 2 cut(s) | 562, 1666 |
| BspPI | GGATC | 3 cut(s) | 36, 1279, 1315 |
| BspT104I | TTCGAA | 1 cut(s) | 1253 |
| BsrDI | GCAATG | 1 cut(s) | 367 |
| BsrI | ACTGG | 6 cut(s) | 153, 174, 460, 613, 1626, 1656 |
| BssECI | CCNNGG | 4 cut(s) | 84, 631, 654, 1685 |
| BssMI | GATC | 9 cut(s) | 28, 482, 514, 706, 874, 889, 1137, 1271, 1307 |
| BssT1I | CCWWGG | 2 cut(s) | 84, 654 |
| Bst2UI | CCWGG | 4 cut(s) | 317, 490, 633, 1686 |
| Bst4CI | ACNGT | 3 cut(s) | 541, 689, 1181 |
| Bst6I | CTCTTC | 5 cut(s) | 750, 1149, 1284, 1350, 1584 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1681 |
| BstBI | TTCGAA | 1 cut(s) | 1253 |
| BstC8I | GCNNGC | 1 cut(s) | 837 |
| BstDSI | CCRYGG | 2 cut(s) | 84, 654 |
| BstF5I | GGATG | 3 cut(s) | 454, 736, 1291 |
| BstKTI | GATC | 9 cut(s) | 31, 485, 517, 709, 877, 892, 1140, 1274, 1310 |
| BstMAI | GTCTC | 4 cut(s) | 300, 941, 1046, 1151 |
| BstMBI | GATC | 9 cut(s) | 28, 482, 514, 706, 874, 889, 1137, 1271, 1307 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 1328, 1468, 1681 |
| BstNI | CCWGG | 4 cut(s) | 317, 490, 633, 1686 |
| BstNSI | RCATGY | 1 cut(s) | 1025 |
| BstSCI | CCNGG | 4 cut(s) | 315, 488, 631, 1684 |
| BstSFI | CTRYAG | 2 cut(s) | 469, 1701 |
| BstV1I | GCAGC | 4 cut(s) | 174, 410, 437, 1309 |
| BstV2I | GAAGAC | 3 cut(s) | 230, 359, 533 |
| BstX2I | RGATCY | 4 cut(s) | 28, 706, 889, 1271 |
| BstYI | RGATCY | 4 cut(s) | 28, 706, 889, 1271 |
| Bsu15I | ATCGAT | 1 cut(s) | 1584 |
| BsuRI | GGCC | 3 cut(s) | 512, 746, 839 |
| BsuTUI | ATCGAT | 1 cut(s) | 1584 |
| BtgI | CCRYGG | 2 cut(s) | 84, 654 |
| BtsCI | GGATG | 3 cut(s) | 454, 736, 1291 |
| BtsI | GCAGTG | 1 cut(s) | 198 |
| BtsIMutI | CAGTG | 6 cut(s) | 160, 181, 198, 694, 942, 1186 |
| BveI | ACCTGC | 2 cut(s) | 562, 1666 |
| Cac8I | GCNNGC | 1 cut(s) | 837 |
| Cfr13I | GGNCC | 4 cut(s) | 313, 457, 854, 1168 |
| ClaI | ATCGAT | 1 cut(s) | 1584 |
| CviAII | CATG | 5 cut(s) | 85, 136, 655, 1022, 1498 |
| DpnI | GATC | 9 cut(s) | 30, 484, 516, 708, 876, 891, 1139, 1273, 1309 |
| DpnII | GATC | 9 cut(s) | 28, 482, 514, 706, 874, 889, 1137, 1271, 1307 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 292 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 292 |
| EaeI | YGGCCR | 1 cut(s) | 510 |
| Eam1104I | CTCTTC | 5 cut(s) | 750, 1149, 1284, 1350, 1584 |
| EarI | CTCTTC | 5 cut(s) | 750, 1149, 1284, 1350, 1584 |
| Eco130I | CCWWGG | 2 cut(s) | 84, 654 |
| Eco47I | GGWCC | 4 cut(s) | 313, 457, 854, 1168 |
| Eco57I | CTGAAG | 3 cut(s) | 405, 1263, 1487 |
| EcoRII | CCWGG | 4 cut(s) | 315, 488, 631, 1684 |
| EcoT14I | CCWWGG | 2 cut(s) | 84, 654 |
| ErhI | CCWWGG | 2 cut(s) | 84, 654 |
| FaeI | CATG | 5 cut(s) | 88, 139, 658, 1025, 1501 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 403, 435 |
| FaqI | GGGAC | 1 cut(s) | 253 |
| FatI | CATG | 5 cut(s) | 84, 135, 654, 1021, 1497 |
| FbaI | TGATCA | 1 cut(s) | 874 |
| FblI | GTMKAC | 3 cut(s) | 468, 813, 1002 |
| Fnu4HI | GCNGC | 4 cut(s) | 188, 399, 426, 1323 |
| FokI | GGATG | 3 cut(s) | 461, 743, 1298 |
| Fsp4HI | GCNGC | 4 cut(s) | 188, 399, 426, 1323 |
| FspBI | CTAG | 4 cut(s) | 207, 357, 477, 983 |
| GluI | GCNGC | 4 cut(s) | 188, 399, 426, 1323 |
| GsaI | CCCAGC | 1 cut(s) | 65 |
| GsuI | CTGGAG | 4 cut(s) | 324, 378, 723, 1643 |
| HaeIII | GGCC | 3 cut(s) | 512, 746, 839 |
| HapII | CCGG | 1 cut(s) | 1199 |
| Hin1II | CATG | 5 cut(s) | 88, 139, 658, 1025, 1501 |
| HincII | GTYRAC | 2 cut(s) | 1222, 1522 |
| HindII | GTYRAC | 2 cut(s) | 1222, 1522 |
| HpaI | GTTAAC | 1 cut(s) | 1522 |
| HpaII | CCGG | 1 cut(s) | 1199 |
| HphI | GGTGA | 6 cut(s) | 632, 1072, 1097, 1332, 1588, 1645 |
| Hpy166II | GTNNAC | 7 cut(s) | 469, 814, 1003, 1063, 1168, 1222, 1522 |
| Hpy188III | TCNNGA | 9 cut(s) | 107, 125, 344, 710, 878, 1031, 1112, 1305, 1352 |
| Hpy8I | GTNNAC | 7 cut(s) | 469, 814, 1003, 1063, 1168, 1222, 1522 |
| Hpy99I | CGWCG | 2 cut(s) | 222, 289 |
| HpyAV | CCTTC | 6 cut(s) | 18, 439, 845, 1307, 1567, 1630 |
| HpyCH4III | ACNGT | 3 cut(s) | 541, 689, 1181 |
| HpyCH4IV | ACGT | 2 cut(s) | 830, 978 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 1328, 1468, 1681 |
| HpySE526I | ACGT | 2 cut(s) | 830, 978 |
| Hsp92II | CATG | 5 cut(s) | 88, 139, 658, 1025, 1501 |
| Ksp22I | TGATCA | 1 cut(s) | 874 |
| KspAI | GTTAAC | 1 cut(s) | 1522 |
| Kzo9I | GATC | 9 cut(s) | 28, 482, 514, 706, 874, 889, 1137, 1271, 1307 |
| LmnI | GCTCC | 2 cut(s) | 163, 1336 |
| Lsp1109I | GCAGC | 4 cut(s) | 174, 410, 437, 1309 |
| LweI | GCATC | 4 cut(s) | 82, 721, 1030, 1069 |
| MaeI | CTAG | 4 cut(s) | 207, 357, 477, 983 |
| MaeII | ACGT | 2 cut(s) | 830, 978 |
| MaeIII | GTNAC | 4 cut(s) | 689, 769, 1576, 1658 |
| MalI | GATC | 9 cut(s) | 30, 484, 516, 708, 876, 891, 1139, 1273, 1309 |
| MboI | GATC | 9 cut(s) | 28, 482, 514, 706, 874, 889, 1137, 1271, 1307 |
| MflI | RGATCY | 4 cut(s) | 28, 706, 889, 1271 |
| MhlI | GDGCHC | 2 cut(s) | 160, 387 |
| MluCI | AATT | 8 cut(s) | 35, 452, 717, 1026, 1107, 1144, 1336, 1418 |
| MlyI | GAGTC | 4 cut(s) | 977, 1115, 1217, 1291 |
| MmeI | TCCRAC | 1 cut(s) | 194 |
| MseI | TTAA | 3 cut(s) | 644, 1451, 1521 |
| MslI | CAYNNNNRTG | 3 cut(s) | 957, 1215, 1502 |
| MspI | CCGG | 1 cut(s) | 1199 |
| MspR9I | CCNGG | 4 cut(s) | 317, 490, 633, 1686 |
| Mva1269I | GAATGC | 1 cut(s) | 163 |
| MvaI | CCWGG | 4 cut(s) | 317, 490, 633, 1686 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 1328, 1468, 1681 |
| NcoI | CCATGG | 2 cut(s) | 84, 654 |
| NdeII | GATC | 9 cut(s) | 28, 482, 514, 706, 874, 889, 1137, 1271, 1307 |
| NlaIII | CATG | 5 cut(s) | 88, 139, 658, 1025, 1501 |
| NmuCI | GTSAC | 2 cut(s) | 689, 1576 |
| NspI | RCATGY | 1 cut(s) | 1025 |
| NspV | TTCGAA | 1 cut(s) | 1253 |
| PctI | GAATGC | 1 cut(s) | 163 |
| PfeI | GAWTC | 9 cut(s) | 139, 149, 601, 788, 932, 1088, 1184, 1250, 1403 |
| PkrI | GCNGC | 4 cut(s) | 189, 400, 427, 1324 |
| PleI | GAGTC | 4 cut(s) | 976, 1115, 1217, 1291 |
| PpsI | GAGTC | 4 cut(s) | 976, 1115, 1217, 1291 |
| Psp1406I | AACGTT | 2 cut(s) | 830, 978 |
| Psp6I | CCWGG | 4 cut(s) | 315, 488, 631, 1684 |
| PspFI | CCCAGC | 1 cut(s) | 61 |
| PspGI | CCWGG | 4 cut(s) | 315, 488, 631, 1684 |
| PspPI | GGNCC | 4 cut(s) | 313, 457, 854, 1168 |
| PstI | CTGCAG | 1 cut(s) | 1705 |
| PsuI | RGATCY | 4 cut(s) | 28, 706, 889, 1271 |
| RseI | CAYNNNNRTG | 3 cut(s) | 957, 1215, 1502 |
| SaqAI | TTAA | 3 cut(s) | 644, 1451, 1521 |
| SatI | GCNGC | 4 cut(s) | 188, 399, 426, 1323 |
| Sau3AI | GATC | 9 cut(s) | 28, 482, 514, 706, 874, 889, 1137, 1271, 1307 |
| Sau96I | GGNCC | 4 cut(s) | 313, 457, 854, 1168 |
| SchI | GAGTC | 4 cut(s) | 977, 1115, 1217, 1291 |
| ScrFI | CCNGG | 4 cut(s) | 317, 490, 633, 1686 |
| SduI | GDGCHC | 2 cut(s) | 160, 387 |
| SfaNI | GCATC | 4 cut(s) | 82, 721, 1030, 1069 |
| SfcI | CTRYAG | 2 cut(s) | 469, 1701 |
| SfuI | TTCGAA | 1 cut(s) | 1253 |
| SinI | GGWCC | 4 cut(s) | 313, 457, 854, 1168 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 957, 1215, 1502 |
| SmlI | CTYRAG | 3 cut(s) | 107, 342, 710 |
| SmoI | CTYRAG | 3 cut(s) | 107, 342, 710 |
| Sse9I | AATT | 8 cut(s) | 35, 452, 717, 1026, 1107, 1144, 1336, 1418 |
| SsiI | CCGC | 2 cut(s) | 161, 1283 |
| SspMI | CTAG | 4 cut(s) | 207, 357, 477, 983 |
| StyD4I | CCNGG | 4 cut(s) | 315, 488, 631, 1684 |
| StyI | CCWWGG | 2 cut(s) | 84, 654 |
| TaaI | ACNGT | 3 cut(s) | 541, 689, 1181 |
| TaiI | ACGT | 2 cut(s) | 833, 981 |
| TaqI | TCGA | 4 cut(s) | 217, 284, 1253, 1584 |
| TaqII | GACCGA | 1 cut(s) | 454 |
| TasI | AATT | 8 cut(s) | 35, 452, 717, 1026, 1107, 1144, 1336, 1418 |
| TfiI | GAWTC | 9 cut(s) | 139, 149, 601, 788, 932, 1088, 1184, 1250, 1403 |
| Tru1I | TTAA | 3 cut(s) | 644, 1451, 1521 |
| Tru9I | TTAA | 3 cut(s) | 644, 1451, 1521 |
| TscAI | CASTG | 6 cut(s) | 160, 181, 205, 694, 949, 1186 |
| TseFI | GTSAC | 2 cut(s) | 689, 1576 |
| TseI | GCWGC | 4 cut(s) | 187, 398, 425, 1322 |
| Tsp45I | GTSAC | 2 cut(s) | 689, 1576 |
| TspGWI | ACGGA | 2 cut(s) | 235, 755 |
| TspRI | CASTG | 6 cut(s) | 160, 181, 205, 694, 949, 1186 |
| VpaK11BI | GGWCC | 4 cut(s) | 313, 457, 854, 1168 |
| XapI | RAATTY | 1 cut(s) | 1336 |
| XceI | RCATGY | 1 cut(s) | 1025 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 82 |
| XmiI | GTMKAC | 3 cut(s) | 468, 813, 1002 |
| XspI | CTAG | 4 cut(s) | 207, 357, 477, 983 |