No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G03130 AT5G17160 |
| fragaria_vesca | FvH4_1g07490 FvH4_2g06690 FvH4_2g06700 FvH4_5g14120 FvH4_7g33621 FvH4_7g33621 FvH4_7g33621 FvH4_7g33621 |
| malus_domestica | MD01G1233900.v1.1 MD07G1306000.v1.1 |
| prunus_persica | Prupe.2G324100_v2.0.a1 |
| pyrus_communis | pycom01g24220 pycom07g27920 |
| rosa_chinensis | RchiOBHm_Chr1g0383881 RchiOBHm_Chr4g0397811 |
| rosa_laevigata | RLG00000009396 RLG00000013940 RLG00000026089 |
| rosa_multiflora | Rmu_co8173668.1_g000001 Rmu_co8232707.1_g000001 Rmu_sc0002148.1_g000005 Rmu_sc0002321.1_g000010 Rmu_sc0002321.1_g000020 Rmu_sc0002378.1_g000002 Rmu_sc0005139.1_g000031 Rmu_sc0012471.1_g000003 Rmu_sc0013807.1_g000006 Rmu_sc0020611.1_g000016 Rmu_sc0028224.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00277180 Rroxscaffold_5G00342610 |
| rosa_rugosa | Rorug01G0442700 |
| rosa_samantha | Rh1AG468700 Rh1BG426400 Rh1CG439100 Rh1DG459200 Rh4CG087100 Rh4CG091100 |
| rosa_wichuraiana | Rw1G040370 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 224 |
| AccI | GTMKAC | 1 cut(s) | 5 |
| AcsI | RAATTY | 1 cut(s) | 161 |
| AcuI | CTGAAG | 2 cut(s) | 176, 209 |
| AfaI | GTAC | 2 cut(s) | 38, 267 |
| AleI | CACNNNNGTG | 1 cut(s) | 230 |
| AluBI | AGCT | 2 cut(s) | 63, 187 |
| AluI | AGCT | 2 cut(s) | 63, 187 |
| Alw26I | GTCTC | 2 cut(s) | 46, 143 |
| ApoI | RAATTY | 1 cut(s) | 161 |
| AspS9I | GGNCC | 1 cut(s) | 97 |
| AvaII | GGWCC | 1 cut(s) | 97 |
| BaeGI | GKGCMC | 1 cut(s) | 227 |
| BanI | GGYRCC | 1 cut(s) | 224 |
| BccI | CCATC | 1 cut(s) | 76 |
| BcoDI | GTCTC | 2 cut(s) | 46, 143 |
| BfmI | CTRYAG | 1 cut(s) | 6 |
| Bme18I | GGWCC | 1 cut(s) | 97 |
| BmgT120I | GGNCC | 1 cut(s) | 97 |
| BmiI | GGNNCC | 1 cut(s) | 226 |
| BpuEI | CTTGAG | 1 cut(s) | 122 |
| BsaJI | CCNNGG | 1 cut(s) | 228 |
| Bse3DI | GCAATG | 1 cut(s) | 39 |
| BseDI | CCNNGG | 1 cut(s) | 228 |
| BseGI | GGATG | 1 cut(s) | 97 |
| BseMI | GCAATG | 1 cut(s) | 39 |
| BseMII | CTCAG | 2 cut(s) | 69, 248 |
| BseSI | GKGCMC | 1 cut(s) | 227 |
| BshNI | GGYRCC | 1 cut(s) | 224 |
| BsmAI | GTCTC | 2 cut(s) | 46, 143 |
| BsmBI | CGTCTC | 1 cut(s) | 46 |
| Bsp1286I | GDGCHC | 1 cut(s) | 227 |
| BspCNI | CTCAG | 2 cut(s) | 70, 249 |
| BspLI | GGNNCC | 1 cut(s) | 226 |
| BspT107I | GGYRCC | 1 cut(s) | 224 |
| BsrDI | GCAATG | 1 cut(s) | 39 |
| BssECI | CCNNGG | 1 cut(s) | 228 |
| BssT1I | CCWWGG | 1 cut(s) | 228 |
| Bst4CI | ACNGT | 1 cut(s) | 71 |
| BstDEI | CTNAG | 3 cut(s) | 78, 171, 257 |
| BstF5I | GGATG | 1 cut(s) | 97 |
| BstMAI | GTCTC | 2 cut(s) | 46, 143 |
| BstSFI | CTRYAG | 1 cut(s) | 6 |
| BstSLI | GKGCMC | 1 cut(s) | 227 |
| BtsCI | GGATG | 1 cut(s) | 97 |
| BtsIMutI | CAGTG | 1 cut(s) | 254 |
| Cfr13I | GGNCC | 1 cut(s) | 97 |
| Csp6I | GTAC | 2 cut(s) | 37, 266 |
| CviJI | RGCY | 4 cut(s) | 63, 170, 187, 244 |
| CviKI_1 | RGCY | 4 cut(s) | 63, 170, 187, 244 |
| CviQI | GTAC | 2 cut(s) | 37, 266 |
| DdeI | CTNAG | 3 cut(s) | 78, 171, 257 |
| Eco130I | CCWWGG | 1 cut(s) | 228 |
| Eco47I | GGWCC | 1 cut(s) | 97 |
| Eco57I | CTGAAG | 2 cut(s) | 176, 209 |
| EcoO109I | RGGNCCY | 1 cut(s) | 97 |
| EcoT14I | CCWWGG | 1 cut(s) | 228 |
| ErhI | CCWWGG | 1 cut(s) | 228 |
| Esp3I | CGTCTC | 1 cut(s) | 46 |
| FaiI | YATR | 1 cut(s) | 179 |
| FblI | GTMKAC | 1 cut(s) | 5 |
| FokI | GGATG | 1 cut(s) | 104 |
| HindIII | AAGCTT | 1 cut(s) | 61 |
| HinfI | GANTC | 1 cut(s) | 151 |
| Hpy166II | GTNNAC | 1 cut(s) | 6 |
| Hpy188I | TCNGA | 2 cut(s) | 46, 156 |
| Hpy8I | GTNNAC | 1 cut(s) | 6 |
| HpyCH4III | ACNGT | 1 cut(s) | 71 |
| HpyCH4IV | ACGT | 1 cut(s) | 39 |
| HpyCH4V | TGCA | 2 cut(s) | 32, 254 |
| HpyF3I | CTNAG | 3 cut(s) | 78, 171, 257 |
| HpySE526I | ACGT | 1 cut(s) | 39 |
| LmnI | GCTCC | 1 cut(s) | 184 |
| LpnPI | CCDG | 1 cut(s) | 282 |
| MaeII | ACGT | 1 cut(s) | 39 |
| MboII | GAAGA | 4 cut(s) | 130, 133, 169, 202 |
| MhlI | GDGCHC | 1 cut(s) | 227 |
| MluCI | AATT | 3 cut(s) | 27, 161, 249 |
| MlyI | GAGTC | 1 cut(s) | 145 |
| MmeI | TCCRAC | 1 cut(s) | 121 |
| MnlI | CCTC | 5 cut(s) | 49, 88, 97, 124, 214 |
| MseI | TTAA | 1 cut(s) | 165 |
| MslI | CAYNNNNRTG | 1 cut(s) | 230 |
| NlaIV | GGNNCC | 1 cut(s) | 226 |
| OliI | CACNNNNGTG | 1 cut(s) | 230 |
| PleI | GAGTC | 1 cut(s) | 145 |
| PpsI | GAGTC | 1 cut(s) | 145 |
| PpuMI | RGGWCCY | 1 cut(s) | 97 |
| Psp5II | RGGWCCY | 1 cut(s) | 97 |
| PspN4I | GGNNCC | 1 cut(s) | 226 |
| PspPI | GGNCC | 1 cut(s) | 97 |
| PspPPI | RGGWCCY | 1 cut(s) | 97 |
| RsaI | GTAC | 2 cut(s) | 38, 267 |
| RsaNI | GTAC | 2 cut(s) | 37, 266 |
| RseI | CAYNNNNRTG | 1 cut(s) | 230 |
| SaqAI | TTAA | 1 cut(s) | 165 |
| Sau96I | GGNCC | 1 cut(s) | 97 |
| SchI | GAGTC | 1 cut(s) | 145 |
| SduI | GDGCHC | 1 cut(s) | 227 |
| SetI | ASST | 6 cut(s) | 42, 65, 102, 135, 189, 234 |
| SfcI | CTRYAG | 1 cut(s) | 6 |
| SgeI | CNNG | 7 cut(s) | 21, 76, 100, 113, 241, 258, 281 |
| SinI | GGWCC | 1 cut(s) | 97 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 230 |
| SmlI | CTYRAG | 1 cut(s) | 101 |
| SmoI | CTYRAG | 1 cut(s) | 101 |
| Sse9I | AATT | 3 cut(s) | 27, 161, 249 |
| StyI | CCWWGG | 1 cut(s) | 228 |
| TaaI | ACNGT | 1 cut(s) | 71 |
| TaiI | ACGT | 1 cut(s) | 42 |
| TasI | AATT | 3 cut(s) | 27, 161, 249 |
| Tru1I | TTAA | 1 cut(s) | 165 |
| Tru9I | TTAA | 1 cut(s) | 165 |
| TscAI | CASTG | 1 cut(s) | 261 |
| TspDTI | ATGAA | 1 cut(s) | 131 |
| TspRI | CASTG | 1 cut(s) | 261 |
| VpaK11BI | GGWCC | 1 cut(s) | 97 |
| XapI | RAATTY | 1 cut(s) | 161 |
| XmiI | GTMKAC | 1 cut(s) | 5 |