AT5G37590

Tetratricopeptide repeat

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0002412
Physical Location & Seq
Reverse (-)
14927185 .. 14932787
5603 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G37590.1

Sequence Viewer

Length: 1668 bp
ATGTCTCTGCTTCGAATTTTGTCGACTCTTTACAAAGGAACTCATCGGACTTCACGTTCCTTCTCTTCTTCGCGGAATCTGATCTGCACCACTTTCGCTAATCCACTCTCCGGGAAACCGAGGATTTCGTATCAGAATGATTATGGAGGCCATAGAACAAATTTGCATCTCTTGGATTCTCGGCTTTGGATTATCTTATCTGGACAAGCTGCAATCCTTGGGTTTTGTGGGAACACTGTATTGGCAGAGGATGAGTCTATGAAGTCGAAATCTGGAGATAATATGGATGAGAGTGGCAATACTGGGCTAGAAAAAATTGAGGACGGGTCGGTTGTATCTAATATACACACATCTAAGTGGAGGGTGTTTACTGATAGTGGAAGAGATTATTTCTTTCAGGGGAAACTCGAGCCGGCTGAGAGACTTTTCGGTTCGGCAATACAGGAAGCTAAGGAAGGTTTTGGAGAGAAGGATCCACATGTTGCATCTGCATGCAACAATCTGGCAGAGTTATATAGAGTCAAGAAAGAATTCGACAAAGCAGAGCCTTTATACCTAGAAGCTGTTAGTATCTTGGAGGAGTTCTACGGTCCTGACGATGTGCGTGTTGGTGCTACTCTCCACAACCTTGGACAACTCTATCTTGTCCAGCGAAAACTTGAGGAAGCTCGTGCGTGCTATGAGCGTGCTTTAAAGTTGAAAGGACGAGTCCTGGGGTATAATCATCCGGATTATGCAGAGACAATGTATCATCTTGGAACGGTATTACATATGCTAGGAAAAAATACAGATGCGGAAGCTCTTATTCTGGATTCTCTTAAAATACTTGAGGAAGGTGGTCAAGGAGAGTCCATGGCATATATCAGGAGACTGAGATATCTTTCTCAGATATATATACGATCCAATCGTCTGGCCGAGGCTGAAAAACTTCAAAGGAAATTATTGCACATGATGGAATTATCGAAGGGATGGAACTCAATGGAGGCAATAACTGCAGCTGAAGCATTGGCTCTCACTTTACGATTATCTGGGAAGCTGGGAGAAGCTCTAGAACTTTTTGAAAAGTGTCTCAATGCCCGAAAAAAATTACTTCCAGAAGGACATATCCAGATAGGTGGAAACTTGCTGCACATCGCAAAGACATTTATGCTTCAGGCTAGTCAGATGAGAAGAACTGATAACAGTGAAGCTCTATCCAAACTAGAAAAAGCAAAGAATTATCTTGAAAACTCAGCTAGGATAGCAAAGGACGTTCTGCATAAGCTTAAAAACCAAAAGAGCAAAGCGCAGAAAGACGAAAAATCCAGTGCAGCTCTTAGGAATTATGAACACGCGGCTTTAGTCATACTGCTGCAATCTCTTGAGAGTCTTGCAGCTTTGGAGATGAGCAAAAATGAGATCCATGAGCCAAAGGAAGAAAATCTGCATGCAGCTGAAGATTCACTTCTCCAATGTGTTACAGCTTACAAAGAGTTTGGTTATGGAACTCAGCTGCAAGATTCTTCTGAAGTAAAGTCAGAATACCTTTCGTGTCTTAAGCATCTCTCAGCTTTATTAGCAAAGAAAGAGACGACGCTTAACTCAAAGGCAAGTCCTATTTCTTTACCAGAGCTCAAGGAAGAAATTAAGCGTATTGACATCGATCTTCGTTCACAAAAGACAGGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TPR_10 TPR_12 TPR_7 TPR_8

Protein Analysis

555

Amino Acids

62.26

Weight (kDa)

7.99

Isoelectric Point (pI)

43.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_12 PF13424 127 - 194 7.3e-07 Tetratricopeptide repeat
TPR_MalT PF17874 130 - 232 3.5e-06 MalT-like TPR region
TPR_NPHP3 PF24885 157 - 236 8.2e-12 Nephrocystin-3 TPR domain
TPR_12 PF13424 163 - 233 1.6e-15 Tetratricopeptide repeat
TPR_NPHP3 PF24885 189 - 272 3.5e-06 Nephrocystin-3 TPR domain
TPR_MalT PF17874 204 - 356 1.4e-06 MalT-like TPR region
TPR_12 PF13424 205 - 278 1.1e-15 Tetratricopeptide repeat
TPR_10 PF13374 205 - 244 8.9e-10 Tetratricopeptide repeat
TPR_2 PF07719 206 - 233 3.3e-06 Tetratricopeptide repeat
TPR_1 PF00515 206 - 233 3.3e-06 Tetratricopeptide repeat
TPR_16 PF13432 209 - 271 1.7e-06 Tetratricopeptide repeat
TPR_12 PF13424 293 - 362 1.1e-06 Tetratricopeptide repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 23
AccII CGCG 2 cut(s) 73, 1334
AccIII TCCGGA 1 cut(s) 727
AciI CCGC 3 cut(s) 73, 794, 1334
AclWI GGATC 4 cut(s) 467, 480, 894, 1393
AcoI YGGCCR 1 cut(s) 912
AcsI RAATTY 3 cut(s) 15, 160, 530
AcuI CTGAAG 4 cut(s) 1020, 1136, 1455, 1527
AfiI CCNNNNNNNGG 1 cut(s) 110
AflII CTTAAG 1 cut(s) 1535
AflIII ACRYGT 1 cut(s) 478
AgsI TTSAA 4 cut(s) 700, 932, 1061, 1226
AjnI CCWGG 1 cut(s) 711
AjuI GAANNNNNNNTTGG 2 cut(s) 224, 256
AloI GAACNNNNNNTCC 2 cut(s) 40, 72
Alw21I GWGCWC 1 cut(s) 1614
Alw26I GTCTC 6 cut(s) 9, 415, 734, 862, 1073, 1562
AlwI GGATC 4 cut(s) 467, 480, 894, 1393
Ama87I CYCGRG 1 cut(s) 407
Aor13HI TCCGGA 1 cut(s) 727
AoxI GGCC 2 cut(s) 148, 912
ApeKI GCWGC 8 cut(s) 209, 995, 1126, 1310, 1351, 1373, 1430, 1492
ApoI RAATTY 3 cut(s) 15, 160, 530
Asp700I GAANNNNTTC 2 cut(s) 530, 927
AspLEI GCGC 1 cut(s) 1288
AspS9I GGNCC 1 cut(s) 590
AsuC2I CCSGG 1 cut(s) 112
AsuII TTCGAA 1 cut(s) 13
AvaI CYCGRG 1 cut(s) 407
AvaII GGWCC 1 cut(s) 590
BamHI GGATCC 1 cut(s) 472
BanII GRGCYC 1 cut(s) 1614
BauI CACGAG 1 cut(s) 669
Bbv12I GWGCWC 1 cut(s) 1614
BbvI GCAGC 8 cut(s) 196, 1007, 1113, 1322, 1338, 1385, 1442, 1479
BccI CCATC 2 cut(s) 946, 963
BcgI CGANNNNNNTGC 2 cut(s) 76, 110
BciT130I CCWGG 1 cut(s) 713
BcnI CCSGG 1 cut(s) 112
BcoDI GTCTC 6 cut(s) 9, 415, 734, 862, 1073, 1562
BfaI CTAG 7 cut(s) 308, 557, 776, 1049, 1158, 1202, 1236
BfmI CTRYAG 1 cut(s) 993
BfrI CTTAAG 1 cut(s) 1535
BisI GCNGC 9 cut(s) 210, 996, 1127, 1311, 1335, 1352, 1374, 1431, 1493
BlsI GCNGC 9 cut(s) 211, 997, 1128, 1312, 1336, 1353, 1375, 1432, 1494
Bme1390I CCNGG 2 cut(s) 112, 713
Bme18I GGWCC 1 cut(s) 590
BmeT110I CYCGRG 1 cut(s) 407
BmgT120I GGNCC 1 cut(s) 590
BmiI GGNNCC 1 cut(s) 474
BmrFI CCNGG 2 cut(s) 112, 713
BmrI ACTGGG 1 cut(s) 312
BmsI GCATC 4 cut(s) 175, 494, 781, 1549
BmuI ACTGGG 1 cut(s) 312
BpmI CTGGAG 1 cut(s) 294
Bpu10I CCTNAGC 1 cut(s) 450
Bpu14I TTCGAA 1 cut(s) 13
BpuEI CTTGAG 4 cut(s) 680, 848, 1382, 1598
BpuMI CCSGG 1 cut(s) 112
Bsa29I ATCGAT 1 cut(s) 1641
BsaJI CCNNGG 6 cut(s) 119, 217, 628, 712, 852, 915
BsaWI WCCGGW 1 cut(s) 727
Bsc4I CCNNNNNNNGG 1 cut(s) 110
Bse118I RCCGGY 1 cut(s) 412
Bse1I ACTGG 2 cut(s) 307, 1305
BseAI TCCGGA 1 cut(s) 727
BseBI CCWGG 1 cut(s) 713
BseCI ATCGAT 1 cut(s) 1641
BseDI CCNNGG 6 cut(s) 119, 217, 628, 712, 852, 915
BseGI GGATG 4 cut(s) 256, 292, 724, 974
BseLI CCNNNNNNNGG 1 cut(s) 110
BseMII CTCAG 6 cut(s) 408, 863, 899, 1245, 1502, 1560
BseNI ACTGG 2 cut(s) 307, 1305
BseRI GAGGAG 1 cut(s) 593
BseXI GCAGC 8 cut(s) 196, 1007, 1113, 1322, 1338, 1385, 1442, 1479
BseYI CCCAGC 1 cut(s) 1036
BsgI GTGCAG 3 cut(s) 70, 1112, 1329
Bsh1236I CGCG 2 cut(s) 73, 1334
BshFI GGCC 2 cut(s) 150, 914
BshVI ATCGAT 1 cut(s) 1641
BsiHKAI GWGCWC 1 cut(s) 1614
BsiHKCI CYCGRG 1 cut(s) 407
BsiSI CCGG 3 cut(s) 111, 413, 728
BslI CCNNNNNNNGG 1 cut(s) 110
BsmAI GTCTC 6 cut(s) 9, 415, 734, 862, 1073, 1562
BsmBI CGTCTC 1 cut(s) 1562
BsnI GGCC 2 cut(s) 150, 914
BsoBI CYCGRG 1 cut(s) 407
Bsp119I TTCGAA 1 cut(s) 13
Bsp1286I GDGCHC 1 cut(s) 1614
Bsp13I TCCGGA 1 cut(s) 727
Bsp143I GATC 5 cut(s) 81, 472, 899, 1398, 1642
Bsp19I CCATGG 1 cut(s) 852
BspACI CCGC 3 cut(s) 73, 794, 1334
BspANI GGCC 2 cut(s) 150, 914
BspCNI CTCAG 6 cut(s) 409, 864, 898, 1244, 1501, 1559
BspDI ATCGAT 1 cut(s) 1641
BspEI TCCGGA 1 cut(s) 727
BspFNI CGCG 2 cut(s) 73, 1334
BspLI GGNNCC 1 cut(s) 474
BspMAI CTGCAG 1 cut(s) 997
BspPI GGATC 4 cut(s) 467, 480, 894, 1393
BspT104I TTCGAA 1 cut(s) 13
BspTI CTTAAG 1 cut(s) 1535
BsrFI RCCGGY 1 cut(s) 412
BsrI ACTGG 2 cut(s) 307, 1305
BssAI RCCGGY 1 cut(s) 412
BssECI CCNNGG 6 cut(s) 119, 217, 628, 712, 852, 915
BssMI GATC 5 cut(s) 81, 472, 899, 1398, 1642
BssSI CACGAG 1 cut(s) 669
BssT1I CCWWGG 3 cut(s) 217, 628, 852
Bst2BI CACGAG 1 cut(s) 669
Bst2UI CCWGG 1 cut(s) 713
Bst4CI ACNGT 4 cut(s) 238, 590, 763, 1184
Bst6I CTCTTC 2 cut(s) 70, 376
BstAFI CTTAAG 1 cut(s) 1535
BstAPI GCANNNNNTGC 1 cut(s) 992
BstBI TTCGAA 1 cut(s) 13
BstC8I GCNNGC 5 cut(s) 414, 493, 676, 687, 1428
BstDEI CTNAG 9 cut(s) 354, 417, 450, 872, 885, 1231, 1316, 1488, 1546
BstDSI CCRYGG 1 cut(s) 852
BstF5I GGATG 4 cut(s) 256, 292, 724, 974
BstFNI CGCG 2 cut(s) 73, 1334
BstHHI GCGC 1 cut(s) 1288
BstKTI GATC 5 cut(s) 84, 475, 902, 1401, 1645
BstMAI GTCTC 6 cut(s) 9, 415, 734, 862, 1073, 1562
BstMBI GATC 5 cut(s) 81, 472, 899, 1398, 1642
BstMWI GCNNNNNNNGC 4 cut(s) 992, 1001, 1241, 1556
BstNI CCWGG 1 cut(s) 713
BstNSI RCATGY 3 cut(s) 482, 495, 1430
BstSCI CCNGG 2 cut(s) 110, 711
BstSFI CTRYAG 1 cut(s) 993
BstUI CGCG 2 cut(s) 73, 1334
BstV1I GCAGC 8 cut(s) 196, 1007, 1113, 1322, 1338, 1385, 1442, 1479
BstX2I RGATCY 2 cut(s) 472, 1398
BstXI CCANNNNNNTGG 3 cut(s) 629, 910, 1115
BstYI RGATCY 2 cut(s) 472, 1398
Bsu15I ATCGAT 1 cut(s) 1641
BsuRI GGCC 2 cut(s) 150, 914
BsuTUI ATCGAT 1 cut(s) 1641
BtgI CCRYGG 1 cut(s) 852
BtgZI GCGATG 1 cut(s) 1117
BtsCI GGATG 4 cut(s) 256, 292, 724, 974
BtsIMutI CAGTG 3 cut(s) 234, 1189, 1312
Cac8I GCNNGC 5 cut(s) 414, 493, 676, 687, 1428
CfoI GCGC 1 cut(s) 1288
Cfr10I RCCGGY 1 cut(s) 412
Cfr13I GGNCC 1 cut(s) 590
ClaI ATCGAT 1 cut(s) 1641
CseI GACGC 1 cut(s) 1582
CviAII CATG 6 cut(s) 479, 492, 853, 949, 1403, 1427
DdeI CTNAG 9 cut(s) 354, 417, 450, 872, 885, 1231, 1316, 1488, 1546
DpnI GATC 5 cut(s) 83, 474, 901, 1400, 1644
DpnII GATC 5 cut(s) 81, 472, 899, 1398, 1642
DraI TTTAAA 1 cut(s) 693
EaeI YGGCCR 1 cut(s) 912
Eam1104I CTCTTC 2 cut(s) 70, 376
EarI CTCTTC 2 cut(s) 70, 376
Ecl136II GAGCTC 1 cut(s) 1612
Eco130I CCWWGG 3 cut(s) 217, 628, 852
Eco24I GRGCYC 1 cut(s) 1614
Eco32I GATATC 1 cut(s) 878
Eco47I GGWCC 1 cut(s) 590
Eco53kI GAGCTC 1 cut(s) 1612
Eco57I CTGAAG 4 cut(s) 1020, 1136, 1455, 1527
Eco88I CYCGRG 1 cut(s) 407
EcoICRI GAGCTC 1 cut(s) 1612
EcoRI GAATTC 1 cut(s) 530
EcoRII CCWGG 1 cut(s) 711
EcoRV GATATC 1 cut(s) 878
EcoT14I CCWWGG 3 cut(s) 217, 628, 852
EcoT38I GRGCYC 1 cut(s) 1614
ErhI CCWWGG 3 cut(s) 217, 628, 852
Esp3I CGTCTC 1 cut(s) 1562
FaeI CATG 6 cut(s) 482, 495, 856, 952, 1406, 1430
FalI AAGNNNNNCTT 2 cut(s) 1428, 1460
FatI CATG 6 cut(s) 478, 491, 852, 948, 1402, 1426
FauNDI CATATG 1 cut(s) 771
FblI GTMKAC 1 cut(s) 23
Fnu4HI GCNGC 9 cut(s) 210, 996, 1127, 1311, 1335, 1352, 1374, 1431, 1493
FokI GGATG 4 cut(s) 263, 299, 711, 981
FriOI GRGCYC 1 cut(s) 1614
Fsp4HI GCNGC 9 cut(s) 210, 996, 1127, 1311, 1335, 1352, 1374, 1431, 1493
FspBI CTAG 7 cut(s) 308, 557, 776, 1049, 1158, 1202, 1236
GlaI GCGC 1 cut(s) 1287
GluI GCNGC 9 cut(s) 210, 996, 1127, 1311, 1335, 1352, 1374, 1431, 1493
GsaI CCCAGC 1 cut(s) 1040
GsuI CTGGAG 1 cut(s) 294
HaeIII GGCC 2 cut(s) 150, 914
HapII CCGG 3 cut(s) 111, 413, 728
HgaI GACGC 1 cut(s) 1582
HhaI GCGC 1 cut(s) 1288
Hin1II CATG 6 cut(s) 482, 495, 856, 952, 1406, 1430
Hin6I GCGC 1 cut(s) 1286
HinP1I GCGC 1 cut(s) 1286
HincII GTYRAC 1 cut(s) 24
HindII GTYRAC 1 cut(s) 24
HindIII AAGCTT 1 cut(s) 1262
HpaII CCGG 3 cut(s) 111, 413, 728
Hpy166II GTNNAC 3 cut(s) 24, 369, 1652
Hpy188I TCNGA 7 cut(s) 48, 81, 135, 888, 1164, 1507, 1519
Hpy8I GTNNAC 3 cut(s) 24, 369, 1652
Hpy99I CGWCG 1 cut(s) 1576
HpyAV CCTTC 6 cut(s) 70, 449, 463, 827, 958, 1091
HpyCH4III ACNGT 4 cut(s) 238, 590, 763, 1184
HpyCH4IV ACGT 2 cut(s) 55, 1251
HpyF10VI GCNNNNNNNGC 4 cut(s) 992, 1001, 1241, 1556
HpyF3I CTNAG 9 cut(s) 354, 417, 450, 872, 885, 1231, 1316, 1488, 1546
HpySE526I ACGT 2 cut(s) 55, 1251
Hsp92II CATG 6 cut(s) 482, 495, 856, 952, 1406, 1430
HspAI GCGC 1 cut(s) 1286
Kpn2I TCCGGA 1 cut(s) 727
KroI GCCGGC 1 cut(s) 412
KroNI GCCGGC 1 cut(s) 414
Kzo9I GATC 5 cut(s) 81, 472, 899, 1398, 1642
Lsp1109I GCAGC 8 cut(s) 196, 1007, 1113, 1322, 1338, 1385, 1442, 1479
LweI GCATC 4 cut(s) 175, 494, 781, 1549
MaeI CTAG 7 cut(s) 308, 557, 776, 1049, 1158, 1202, 1236
MaeII ACGT 2 cut(s) 55, 1251
MaeIII GTNAC 1 cut(s) 1456
MalI GATC 5 cut(s) 83, 474, 901, 1400, 1644
MboI GATC 5 cut(s) 81, 472, 899, 1398, 1642
MboII GAAGA 9 cut(s) 57, 60, 393, 1182, 1427, 1448, 1494, 1631, 1637
MflI RGATCY 2 cut(s) 472, 1398
MhlI GDGCHC 1 cut(s) 1614
MlyI GAGTC 6 cut(s) 19, 263, 528, 717, 857, 1375
MroI TCCGGA 1 cut(s) 727
MroNI GCCGGC 1 cut(s) 412
MroXI GAANNNNTTC 2 cut(s) 530, 927
MseI TTAA 6 cut(s) 692, 819, 1266, 1536, 1578, 1626
MslI CAYNNNNRTG 2 cut(s) 355, 490
MspA1I CMGCKG 3 cut(s) 998, 1433, 1492
MspCI CTTAAG 1 cut(s) 1535
MspI CCGG 3 cut(s) 111, 413, 728
MspR9I CCNGG 2 cut(s) 112, 713
MvaI CCWGG 1 cut(s) 713
MvnI CGCG 2 cut(s) 73, 1334
MwoI GCNNNNNNNGC 4 cut(s) 992, 1001, 1241, 1556
NaeI GCCGGC 1 cut(s) 414
NciI CCSGG 1 cut(s) 112
NcoI CCATGG 1 cut(s) 852
NdeI CATATG 1 cut(s) 771
NdeII GATC 5 cut(s) 81, 472, 899, 1398, 1642
NgoMIV GCCGGC 1 cut(s) 412
NlaIII CATG 6 cut(s) 482, 495, 856, 952, 1406, 1430
NlaIV GGNNCC 1 cut(s) 474
NmeAIII GCCGAG 2 cut(s) 160, 940
NspI RCATGY 3 cut(s) 482, 495, 1430
NspV TTCGAA 1 cut(s) 13
PaeI GCATGC 2 cut(s) 495, 1430
PaeR7I CTCGAG 1 cut(s) 407
PciI ACATGT 1 cut(s) 478
PcsI WCGNNNNNNNCGW 3 cut(s) 52, 594, 904
PdiI GCCGGC 1 cut(s) 414
PdmI GAANNNNTTC 2 cut(s) 530, 927
PfeI GAWTC 5 cut(s) 76, 176, 812, 1439, 1499
PfoI TCCNGGA 1 cut(s) 110
PkrI GCNGC 9 cut(s) 211, 997, 1128, 1312, 1336, 1353, 1375, 1432, 1494
PleI GAGTC 6 cut(s) 19, 262, 527, 716, 856, 1374
PpsI GAGTC 6 cut(s) 19, 262, 527, 716, 856, 1374
PscI ACATGT 1 cut(s) 478
Psp124BI GAGCTC 1 cut(s) 1614
Psp6I CCWGG 1 cut(s) 711
PspFI CCCAGC 1 cut(s) 1036
PspGI CCWGG 1 cut(s) 711
PspN4I GGNNCC 1 cut(s) 474
PspPI GGNCC 1 cut(s) 590
PspXI VCTCGAGB 1 cut(s) 407
PstI CTGCAG 1 cut(s) 997
PsuI RGATCY 2 cut(s) 472, 1398
PvuII CAGCTG 3 cut(s) 998, 1433, 1492
RseI CAYNNNNRTG 2 cut(s) 355, 490
SacI GAGCTC 1 cut(s) 1614
SalI GTCGAC 1 cut(s) 22
SaqAI TTAA 6 cut(s) 692, 819, 1266, 1536, 1578, 1626
SatI GCNGC 9 cut(s) 210, 996, 1127, 1311, 1335, 1352, 1374, 1431, 1493
Sau3AI GATC 5 cut(s) 81, 472, 899, 1398, 1642
Sau96I GGNCC 1 cut(s) 590
SchI GAGTC 6 cut(s) 19, 263, 528, 717, 857, 1375
ScrFI CCNGG 2 cut(s) 112, 713
SduI GDGCHC 1 cut(s) 1614
SfaNI GCATC 4 cut(s) 175, 494, 781, 1549
SfcI CTRYAG 1 cut(s) 993
Sfr274I CTCGAG 1 cut(s) 407
SfuI TTCGAA 1 cut(s) 13
SinI GGWCC 1 cut(s) 590
SlaI CTCGAG 1 cut(s) 407
SmiMI CAYNNNNRTG 2 cut(s) 355, 490
SmlI CTYRAG 6 cut(s) 407, 659, 827, 1361, 1535, 1613
SmoI CTYRAG 6 cut(s) 407, 659, 827, 1361, 1535, 1613
SphI GCATGC 2 cut(s) 495, 1430
SsiI CCGC 3 cut(s) 73, 794, 1334
SspMI CTAG 7 cut(s) 308, 557, 776, 1049, 1158, 1202, 1236
SstI GAGCTC 1 cut(s) 1614
StyD4I CCNGG 2 cut(s) 110, 711
StyI CCWWGG 3 cut(s) 217, 628, 852
TaaI ACNGT 4 cut(s) 238, 590, 763, 1184
TaiI ACGT 2 cut(s) 58, 1254
TaqI TCGA 7 cut(s) 13, 23, 266, 408, 534, 962, 1641
TauI GCSGC 1 cut(s) 1337
TfiI GAWTC 5 cut(s) 76, 176, 812, 1439, 1499
Tru1I TTAA 6 cut(s) 692, 819, 1266, 1536, 1578, 1626
Tru9I TTAA 6 cut(s) 692, 819, 1266, 1536, 1578, 1626
TscAI CASTG 3 cut(s) 241, 1189, 1312
TseI GCWGC 8 cut(s) 209, 995, 1126, 1310, 1351, 1373, 1430, 1492
TspDTI ATGAA 2 cut(s) 275, 1341
TspRI CASTG 3 cut(s) 241, 1189, 1312
Vha464I CTTAAG 1 cut(s) 1535
VpaK11BI GGWCC 1 cut(s) 590
XapI RAATTY 3 cut(s) 15, 160, 530
XbaI TCTAGA 1 cut(s) 1048
XceI RCATGY 3 cut(s) 482, 495, 1430
XhoI CTCGAG 1 cut(s) 407
XmiI GTMKAC 1 cut(s) 23
XmnI GAANNNNTTC 2 cut(s) 530, 927
XspI CTAG 7 cut(s) 308, 557, 776, 1049, 1158, 1202, 1236
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.