Rroxscaffold_6G00392930

kinesin light chain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
OG0002412
Physical Location & Seq
Forward (+)
12713816 .. 12729567
15752 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00392930.1

Sequence Viewer

Length: 2475 bp
ATGTCTTGTGTGCGGCGAGCGGTAGCTAAGGTGGTGAAGGAGAAGAGGCATATAGTAAACCGTTTGCTCTCTCCTTCTTCTTCAACTTCTAGAATCAGAACCGGAACCGGAACCATGACTGCTGCTCCTTTCTTCTCCGGCGGTACTGCAATTATTCTTGCCATAAATTCCAACACCGTCTTGGCAAAAGATGCATCACTTGATAATCAGGCACAGGGGATGGAAGGGGATGACACAATGCAATTACGCAGAGTTGAGGATGCTTCTGTCAAATCTAACATTCATACCTCTAAGTGGAGAGTTTTTACAGATAAAGGGAGGGAATTCTTCCTGCAGGCAAGCATCCTATGCCTATGTGGAAAAGTGGAGGAAGCTGAAAAGCTCTTTCTCGCGGCTTTACAGGAAGCTAAAGAAGGTTTTGGGAAGAGGGATCCACATGTTGCATCTGCAAGCAATAATTTAGCAGAGCTCTATAGAGTTAATAAGCTATATCATAAGGCAGAGCCATTGTATTTGGAGGCCATCAGCATACTGGAGGAGTCATTTGGTCCTGAAGATATACGAGTTGGGTCTGCCTTTCATAATCTGGGTCAGTTCTATATTGTACAGCGGAAGCTGGATGAAGCCCGTGTTTGCTATGAGATTAAACGCCATGTTCTGGGTCTTAACCATACGGGTTATGCAGATACTATGTATCATCTTGGAACGGTGCTACACCTCCAAGGAAAAGAAAAGGACTCTGAGGCCCTTGTTCAAGATTCCATTCGAATACTTGAGATATATCAGAAATCCAATCGCTTTGAGGAGGCCGAGAAGGTACAAAGAAAGATCCTGCATATAATGGAAATAACAAAGGGATGGAATGCATTGGATACAGCAATAACAGCTGAAGGGCTCGCACTGATCCTCCAATCCACTGGGAGCTTAAAGGAAGCTGAAGAGCTTCTTGAAAGATGTCTTGATGCTCGAAAAGCCTTACTTCCTCAGGATCACATTCAGATTGGTGTGAACTTGCTTCATATTGCTAGAGTGGCAATGCTCAATTCCGACCAACTGAAGAATATTGACTATCCAAAAGCAATTTCTGAGTTTGATAAGGCCAAAGAAGTTTTACATGAGTCCATGAGGATAGCACAGTGTTCCTTGGATAAATTGATGAAGCAAAATAAGAAGATTCGTAGTAATGGAGCACCAGGTGAATTGGGAAAGAATGGTCAGTTGCAAGCTTCTGATGCCCTTGGCCTTTTGGAGATCACAAAGAAACAATTAAAAGGGTCAAAGGTTAGTACTTATGGTCTTGAAGCACTAGGGTCTGCTCATAAACTCTGTTCTGAGCATGCACCTAATATCGAAGCTGAGAATGCACTATTTAAATGTATATCTGCTTACAGAGAGTTCGTAACTGAGAGATCAATCCCTGAGTCTCCTGAAACAAAGGCCGAGTATCTTAAATGTTTGAAGCATCTTTTGAGCTTGAATAGTGATAGCACTACAGAAAGAACACAGCAATCTACTGGAGTCAATTTGCAAGATCTGAGAGACGAAATTAAGCGTCTTGAAGCCATCGACAACGACACCCATCAGTTTGTGGCGATCAAACGGCTGAAGCCAGACGGCGATCCGTGGGCACATGTACCGGAAATCCGTGCTCTCACTAGGTTGGAGCACCCCAATATAGTGAGCCTCAAGGGTGTTGAATACCAAGACGACGACGTCTTCTTTGTTTTTGAGTACATGGAGGGGAGCCTTGGTGATCTTATTGATGAGAGGCTGAGCAGTAGAAACCCTTTCTCGGAGGCCGAAATCCGATCACTGAGCCGTCAGGTGTTGCAAGGCCTTGAATTCATGCATCACCAATGCGGGTTCATGCACCGGGATCTGAAGCCGGAGAATCTTTTGGTGAACAAGGGCATCATCAAAATTTCGGATTTGGGTACTGCTACGGAGATCGACTGCGGCGACCAAGTCCATCATCATTACGTGACCACAAGGTGGTACAGAGCACCGGAGATGCTCTTTCGAGTCTTCGTGATAAACGAGGGGCTTCGACCTTTTGAGTACGATGGGAAAGTCGACATGTGGGCAATGGGGACGATAATGGCAGAGCTGTTTCTGATGCGGCCTCTGTTCGAGGGTGACCATTCGCCGGATCAGCTGTACAGGATCTGCGAAGTCATAGGGGCTCCTCCTTCTAGGGATTCACGGATGATGCCTAAACTTGGGCCGGAGAATGGTGTGGGTCTTCGAGCATTGATGCCAAATGCCAGTGAATCGGTCATCGATCTCATAGAGTCTCTCTGTTCTTGGGATCCTTCGAAAAGGCCTAGTGCTAAGGAAGCTCTCCAGCATCCCTTCTTCAAGAGAGGGCAGAATGTTGACGCTCCTCCTGGGTTCTCATATTGCACTCATACAAGGAACAGTGTGGTTCCAAAGATGAGAGAGTTATCAACCATGCAGCCAATACTGGGAGTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TPR_10 TPR_12 TPR_7 TPR_8

Protein Analysis

824

Amino Acids

92.66

Weight (kDa)

6.43

Isoelectric Point (pI)

47.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_NPHP3 PF24885 142 - 212 6.9e-08 Nephrocystin-3 TPR domain
TPR_12 PF13424 147 - 214 5.8e-09 Tetratricopeptide repeat
TPR_12 PF13424 259 - 324 8.9e-08 Tetratricopeptide repeat
TPR_10 PF13374 292 - 332 2e-06 Tetratricopeptide repeat
Pkinase PF00069 520 - 786 5.2e-56 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 523 - 779 1.9e-23 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1712
AatII GACGTC 1 cut(s) 1716
AccB7I CCANNNNNTGG 2 cut(s) 658, 1992
AccBSI CCGCTC 1 cut(s) 20
AccI GTMKAC 1 cut(s) 2073
AccII CGCG 1 cut(s) 392
AciI CCGC 8 cut(s) 13, 20, 141, 392, 610, 1860, 1956, 2119
AcsI RAATTY 4 cut(s) 166, 323, 1841, 1920
AcuI CTGAAG 6 cut(s) 573, 909, 957, 1076, 1625, 1901
AcyI GRCGYC 1 cut(s) 1713
AdeI CACNNNGTG 2 cut(s) 1196, 1992
AfiI CCNNNNNNNGG 8 cut(s) 294, 658, 1792, 1992, 2146, 2219, 2231, 2465
AflIII ACRYGT 3 cut(s) 436, 1630, 2076
AjnI CCWGG 2 cut(s) 1192, 2386
AjuI GAANNNNNNNTTGG 2 cut(s) 1066, 1098
Alw21I GWGCWC 5 cut(s) 471, 1192, 1651, 1668, 2005
Alw26I GTCTC 3 cut(s) 1428, 1533, 2298
AlwNI CAGNNNCTG 1 cut(s) 2166
ApeKI GCWGC 2 cut(s) 122, 2455
ApoI RAATTY 4 cut(s) 166, 323, 1841, 1920
ArsI GACNNNNNNTTYG 2 cut(s) 1703, 1735
Asp700I GAANNNNTTC 1 cut(s) 942
AspS9I GGNCC 3 cut(s) 548, 745, 2222
AsuC2I CCSGG 1 cut(s) 1874
AsuHPI GGTGA 6 cut(s) 46, 1208, 1763, 1844, 1912, 2147
AsuII TTCGAA 2 cut(s) 766, 2315
AvaII GGWCC 1 cut(s) 548
AxyI CCTNAGG 1 cut(s) 984
BaeGI GKGCMC 1 cut(s) 1630
BamHI GGATCC 2 cut(s) 430, 2308
BanII GRGCYC 3 cut(s) 471, 897, 2185
BbsI GAAGAC 3 cut(s) 1708, 2017, 2234
Bbv12I GWGCWC 5 cut(s) 471, 1192, 1651, 1668, 2005
BbvI GCAGC 2 cut(s) 109, 2467
BccI CCATC 7 cut(s) 214, 530, 852, 1571, 1587, 1977, 2057
BceAI ACGGC 3 cut(s) 1616, 1630, 1803
BciT130I CCWGG 2 cut(s) 1194, 2388
BciVI GTATCC 1 cut(s) 865
BcnI CCSGG 1 cut(s) 1874
BcoDI GTCTC 3 cut(s) 1428, 1533, 2298
BfaI CTAG 6 cut(s) 90, 1026, 1307, 1656, 2193, 2325
BfmI CTRYAG 3 cut(s) 332, 472, 1491
BfuI GTATCC 1 cut(s) 865
BglII AGATCT 1 cut(s) 1531
BisI GCNGC 6 cut(s) 14, 123, 393, 1957, 2120, 2456
BlpI GCTNAGC 1 cut(s) 1772
BlsI GCNGC 6 cut(s) 15, 124, 394, 1958, 2121, 2457
BmcAI AGTACT 1 cut(s) 1288
Bme1390I CCNGG 3 cut(s) 1194, 1874, 2388
Bme18I GGWCC 1 cut(s) 548
BmgT120I GGNCC 3 cut(s) 548, 745, 2222
BmiI GGNNCC 7 cut(s) 106, 112, 432, 1745, 2184, 2310, 2427
BmrFI CCNGG 3 cut(s) 1194, 1874, 2388
BmrI ACTGGG 2 cut(s) 927, 2474
BmuI ACTGGG 2 cut(s) 927, 2474
BpiI GAAGAC 3 cut(s) 1708, 2017, 2234
BpmI CTGGAG 3 cut(s) 554, 1536, 2327
Bpu10I CCTNAGC 2 cut(s) 27, 2331
Bpu1102I GCTNAGC 1 cut(s) 1772
Bpu14I TTCGAA 2 cut(s) 766, 2315
BpuEI CTTGAG 2 cut(s) 794, 1670
BpuMI CCSGG 1 cut(s) 1874
Bsa29I ATCGAT 1 cut(s) 2280
BsaAI YACGTR 1 cut(s) 1981
BsaHI GRCGYC 1 cut(s) 1713
BsaJI CCNNGG 6 cut(s) 721, 1143, 1237, 1622, 1747, 2387
BsaWI WCCGGW 4 cut(s) 101, 107, 1636, 2005
BsaXI ACNNNNNCTCC 6 cut(s) 109, 139, 891, 921, 1735, 1765
Bsc4I CCNNNNNNNGG 8 cut(s) 294, 658, 1792, 1992, 2146, 2219, 2231, 2465
Bse1I ACTGG 5 cut(s) 537, 922, 1519, 2265, 2469
Bse21I CCTNAGG 1 cut(s) 984
Bse3DI GCAATG 2 cut(s) 1041, 2091
BseBI CCWGG 2 cut(s) 1194, 2388
BseCI ATCGAT 1 cut(s) 2280
BseDI CCNNGG 6 cut(s) 721, 1143, 1237, 1622, 1747, 2387
BseGI GGATG 8 cut(s) 225, 235, 265, 342, 625, 863, 2211, 2347
BseLI CCNNNNNNNGG 8 cut(s) 294, 658, 1792, 1992, 2146, 2219, 2231, 2465
BseMI GCAATG 2 cut(s) 1041, 2091
BseNI ACTGG 5 cut(s) 537, 922, 1519, 2265, 2469
BseRI GAGGAG 4 cut(s) 551, 818, 2175, 2373
BseSI GKGCMC 1 cut(s) 1630
BseXI GCAGC 2 cut(s) 109, 2467
Bsh1236I CGCG 1 cut(s) 392
BshVI ATCGAT 1 cut(s) 2280
BsiHKAI GWGCWC 5 cut(s) 471, 1192, 1651, 1668, 2005
BsiSI CCGG 9 cut(s) 102, 108, 138, 1637, 1873, 1886, 2006, 2147, 2225
BslFI GGGAC 1 cut(s) 2104
BslI CCNNNNNNNGG 8 cut(s) 294, 658, 1792, 1992, 2146, 2219, 2231, 2465
BsmAI GTCTC 3 cut(s) 1428, 1533, 2298
BsmBI CGTCTC 1 cut(s) 1533
BsmFI GGGAC 1 cut(s) 2104
BsmI GAATGC 2 cut(s) 868, 1366
Bsp119I TTCGAA 2 cut(s) 766, 2315
Bsp1286I GDGCHC 8 cut(s) 471, 897, 1192, 1630, 1651, 1668, 2005, 2185
Bsp1407I TGTACA 2 cut(s) 604, 2157
Bsp1720I GCTNAGC 1 cut(s) 1772
BspACI CCGC 8 cut(s) 13, 20, 141, 392, 610, 1860, 1956, 2119
BspDI ATCGAT 1 cut(s) 2280
BspFNI CGCG 1 cut(s) 392
BspLI GGNNCC 7 cut(s) 106, 112, 432, 1745, 2184, 2310, 2427
BspMAI CTGCAG 1 cut(s) 336
BspQI GCTCTTC 1 cut(s) 933
BspT104I TTCGAA 2 cut(s) 766, 2315
BsrBI CCGCTC 1 cut(s) 20
BsrDI GCAATG 2 cut(s) 1041, 2091
BsrGI TGTACA 2 cut(s) 604, 2157
BsrI ACTGG 5 cut(s) 537, 922, 1519, 2265, 2469
BssECI CCNNGG 6 cut(s) 721, 1143, 1237, 1622, 1747, 2387
BssNI GRCGYC 1 cut(s) 1713
BssT1I CCWWGG 4 cut(s) 721, 1143, 1237, 1747
Bst2UI CCWGG 2 cut(s) 1194, 2388
Bst4CI ACNGT 5 cut(s) 62, 178, 709, 1137, 2420
Bst6I CTCTTC 3 cut(s) 38, 419, 933
BstACI GRCGYC 1 cut(s) 1713
BstAPI GCANNNNNTGC 2 cut(s) 191, 348
BstAUI TGTACA 2 cut(s) 604, 2157
BstBAI YACGTR 1 cut(s) 1981
BstBI TTCGAA 2 cut(s) 766, 2315
BstC8I GCNNGC 7 cut(s) 18, 336, 340, 451, 897, 1224, 1338
BstDSI CCRYGG 1 cut(s) 1622
BstEII GGTNACC 1 cut(s) 2135
BstF5I GGATG 8 cut(s) 225, 235, 265, 342, 625, 863, 2211, 2347
BstFNI CGCG 1 cut(s) 392
BstMAI GTCTC 3 cut(s) 1428, 1533, 2298
BstMWI GCNNNNNNNGC 9 cut(s) 191, 348, 884, 971, 1031, 1232, 1361, 2152, 2336
BstNI CCWGG 2 cut(s) 1194, 2388
BstNSI RCATGY 4 cut(s) 440, 1340, 1634, 2080
BstPI GGTNACC 1 cut(s) 2135
BstSCI CCNGG 3 cut(s) 1192, 1872, 2386
BstSFI CTRYAG 3 cut(s) 332, 472, 1491
BstSLI GKGCMC 1 cut(s) 1630
BstUI CGCG 1 cut(s) 392
BstV1I GCAGC 2 cut(s) 109, 2467
BstV2I GAAGAC 3 cut(s) 1708, 2017, 2234
BstX2I RGATCY 6 cut(s) 430, 828, 1531, 1876, 2163, 2308
BstXI CCANNNNNNTGG 1 cut(s) 917
BstYI RGATCY 6 cut(s) 430, 828, 1531, 1876, 2163, 2308
Bsu15I ATCGAT 1 cut(s) 2280
Bsu36I CCTNAGG 1 cut(s) 984
BsuI GTATCC 1 cut(s) 865
BsuTUI ATCGAT 1 cut(s) 2280
BtgI CCRYGG 1 cut(s) 1622
BtsCI GGATG 8 cut(s) 225, 235, 265, 342, 625, 863, 2211, 2347
BtsIMutI CAGTG 6 cut(s) 899, 915, 1142, 1811, 2272, 2425
Cac8I GCNNGC 7 cut(s) 18, 336, 340, 451, 897, 1224, 1338
CaiI CAGNNNCTG 1 cut(s) 2166
Cfr13I GGNCC 3 cut(s) 548, 745, 2222
ClaI ATCGAT 1 cut(s) 2280
CseI GACGC 2 cut(s) 1541, 2387
CsiI ACCWGGT 1 cut(s) 1192
DraI TTTAAA 1 cut(s) 1372
DraIII CACNNNGTG 2 cut(s) 1196, 1992
DrdI GACNNNNNNGTC 1 cut(s) 1712
DseDI GACNNNNNNGTC 1 cut(s) 1712
Eam1104I CTCTTC 3 cut(s) 38, 419, 933
EarI CTCTTC 3 cut(s) 38, 419, 933
Ecl136II GAGCTC 1 cut(s) 469
Eco130I CCWWGG 4 cut(s) 721, 1143, 1237, 1747
Eco147I AGGCCT 2 cut(s) 1836, 2323
Eco24I GRGCYC 3 cut(s) 471, 897, 2185
Eco47I GGWCC 1 cut(s) 548
Eco53kI GAGCTC 1 cut(s) 469
Eco57I CTGAAG 6 cut(s) 573, 909, 957, 1076, 1625, 1901
Eco81I CCTNAGG 1 cut(s) 984
Eco91I GGTNACC 1 cut(s) 2135
EcoICRI GAGCTC 1 cut(s) 469
EcoO109I RGGNCCY 1 cut(s) 745
EcoO65I GGTNACC 1 cut(s) 2135
EcoRI GAATTC 2 cut(s) 323, 1841
EcoRII CCWGG 2 cut(s) 1192, 2386
EcoT14I CCWWGG 4 cut(s) 721, 1143, 1237, 1747
EcoT22I ATGCAT 3 cut(s) 196, 868, 1851
EcoT38I GRGCYC 3 cut(s) 471, 897, 2185
ErhI CCWWGG 4 cut(s) 721, 1143, 1237, 1747
Esp3I CGTCTC 1 cut(s) 1533
FalI AAGNNNNNCTT 4 cut(s) 930, 962, 963, 995
FaqI GGGAC 1 cut(s) 2104
FauI CCCGC 1 cut(s) 1853
FblI GTMKAC 1 cut(s) 2073
Fnu4HI GCNGC 6 cut(s) 14, 123, 393, 1957, 2120, 2456
FokI GGATG 8 cut(s) 232, 242, 272, 329, 632, 870, 2218, 2334
FriOI GRGCYC 3 cut(s) 471, 897, 2185
Fsp4HI GCNGC 6 cut(s) 14, 123, 393, 1957, 2120, 2456
FspBI CTAG 6 cut(s) 90, 1026, 1307, 1656, 2193, 2325
GluI GCNGC 6 cut(s) 14, 123, 393, 1957, 2120, 2456
GsuI CTGGAG 3 cut(s) 554, 1536, 2327
HapII CCGG 9 cut(s) 102, 108, 138, 1637, 1873, 1886, 2006, 2147, 2225
HgaI GACGC 2 cut(s) 1541, 2387
Hin1I GRCGYC 1 cut(s) 1713
HincII GTYRAC 2 cut(s) 2074, 2377
HindII GTYRAC 2 cut(s) 2074, 2377
HindIII AAGCTT 1 cut(s) 1224
HpaII CCGG 9 cut(s) 102, 108, 138, 1637, 1873, 1886, 2006, 2147, 2225
HphI GGTGA 6 cut(s) 46, 1208, 1763, 1844, 1912, 2147
Hpy166II GTNNAC 5 cut(s) 58, 1009, 1903, 2074, 2377
Hpy8I GTNNAC 5 cut(s) 58, 1009, 1903, 2074, 2377
Hpy99I CGWCG 2 cut(s) 1712, 1715
HpyAV CCTTC 9 cut(s) 31, 84, 218, 407, 808, 884, 2199, 2322, 2362
HpyCH4III ACNGT 5 cut(s) 62, 178, 709, 1137, 2420
HpyCH4IV ACGT 2 cut(s) 1713, 1980
HpyF10VI GCNNNNNNNGC 9 cut(s) 191, 348, 884, 971, 1031, 1232, 1361, 2152, 2336
HpySE526I ACGT 2 cut(s) 1713, 1980
Hsp92I GRCGYC 1 cut(s) 1713
LguI GCTCTTC 1 cut(s) 933
LmnI GCTCC 7 cut(s) 130, 921, 1187, 1663, 1743, 2188, 2386
Lsp1109I GCAGC 2 cut(s) 109, 2467
MabI ACCWGGT 1 cut(s) 1192
MaeI CTAG 6 cut(s) 90, 1026, 1307, 1656, 2193, 2325
MaeII ACGT 2 cut(s) 1713, 1980
MaeIII GTNAC 3 cut(s) 1399, 1981, 2135
MbiI CCGCTC 1 cut(s) 20
MflI RGATCY 6 cut(s) 430, 828, 1531, 1876, 2163, 2308
MhlI GDGCHC 8 cut(s) 471, 897, 1192, 1630, 1651, 1668, 2005, 2185
MlyI GAGTC 7 cut(s) 548, 731, 1127, 1430, 1527, 2031, 2300
MmeI TCCRAC 3 cut(s) 195, 1071, 1641
Mph1103I ATGCAT 3 cut(s) 196, 868, 1851
MroXI GAANNNNTTC 1 cut(s) 942
MseI TTAA 8 cut(s) 480, 645, 666, 926, 1268, 1371, 1449, 1548
MspA1I CMGCKG 3 cut(s) 610, 887, 2155
MspI CCGG 9 cut(s) 102, 108, 138, 1637, 1873, 1886, 2006, 2147, 2225
MspR9I CCNGG 3 cut(s) 1194, 1874, 2388
Mva1269I GAATGC 2 cut(s) 868, 1366
MvaI CCWGG 2 cut(s) 1194, 2388
MvnI CGCG 1 cut(s) 392
MwoI GCNNNNNNNGC 9 cut(s) 191, 348, 884, 971, 1031, 1232, 1361, 2152, 2336
NciI CCSGG 1 cut(s) 1874
NlaIV GGNNCC 7 cut(s) 106, 112, 432, 1745, 2184, 2310, 2427
NmeAIII GCCGAG 2 cut(s) 835, 1465
NmuCI GTSAC 2 cut(s) 1981, 2135
NsiI ATGCAT 3 cut(s) 196, 868, 1851
NspI RCATGY 4 cut(s) 440, 1340, 1634, 2080
NspV TTCGAA 2 cut(s) 766, 2315
PaeI GCATGC 1 cut(s) 1340
PceI AGGCCT 2 cut(s) 1836, 2323
PciI ACATGT 3 cut(s) 436, 1630, 2076
PciSI GCTCTTC 1 cut(s) 933
PcsI WCGNNNNNNNCGW 2 cut(s) 1956, 2034
PctI GAATGC 2 cut(s) 868, 1366
PdmI GAANNNNTTC 1 cut(s) 942
PfeI GAWTC 6 cut(s) 93, 758, 1174, 1891, 2198, 2270
PflFI GACNNNGTC 2 cut(s) 1712, 1964
PflMI CCANNNNNTGG 2 cut(s) 658, 1992
PkrI GCNGC 6 cut(s) 15, 124, 394, 1958, 2121, 2457
PleI GAGTC 7 cut(s) 547, 731, 1126, 1429, 1526, 2030, 2299
PpsI GAGTC 7 cut(s) 547, 731, 1126, 1429, 1526, 2030, 2299
Ppu21I YACGTR 1 cut(s) 1981
PscI ACATGT 3 cut(s) 436, 1630, 2076
Psp124BI GAGCTC 1 cut(s) 471
Psp6I CCWGG 2 cut(s) 1192, 2386
PspEI GGTNACC 1 cut(s) 2135
PspGI CCWGG 2 cut(s) 1192, 2386
PspN4I GGNNCC 7 cut(s) 106, 112, 432, 1745, 2184, 2310, 2427
PspPI GGNCC 3 cut(s) 548, 745, 2222
PstI CTGCAG 1 cut(s) 336
PstNI CAGNNNCTG 1 cut(s) 2166
PsuI RGATCY 6 cut(s) 430, 828, 1531, 1876, 2163, 2308
PsyI GACNNNGTC 2 cut(s) 1712, 1964
PvuII CAGCTG 2 cut(s) 887, 2155
SacI GAGCTC 1 cut(s) 471
SalI GTCGAC 1 cut(s) 2072
SapI GCTCTTC 1 cut(s) 933
SaqAI TTAA 8 cut(s) 480, 645, 666, 926, 1268, 1371, 1449, 1548
SatI GCNGC 6 cut(s) 14, 123, 393, 1957, 2120, 2456
Sau96I GGNCC 3 cut(s) 548, 745, 2222
SbfI CCTGCAGG 1 cut(s) 336
ScaI AGTACT 1 cut(s) 1288
SchI GAGTC 7 cut(s) 548, 731, 1127, 1430, 1527, 2031, 2300
ScrFI CCNGG 3 cut(s) 1194, 1874, 2388
SdaI CCTGCAGG 1 cut(s) 336
SduI GDGCHC 8 cut(s) 471, 897, 1192, 1630, 1651, 1668, 2005, 2185
SexAI ACCWGGT 1 cut(s) 1192
SfcI CTRYAG 3 cut(s) 332, 472, 1491
SfuI TTCGAA 2 cut(s) 766, 2315
SinI GGWCC 1 cut(s) 548
SmiI ATTTAAAT 1 cut(s) 1372
SmlI CTYRAG 2 cut(s) 773, 1685
SmoI CTYRAG 2 cut(s) 773, 1685
SphI GCATGC 1 cut(s) 1340
Sse8387I CCTGCAGG 1 cut(s) 336
SseBI AGGCCT 2 cut(s) 1836, 2323
SsiI CCGC 8 cut(s) 13, 20, 141, 392, 610, 1860, 1956, 2119
SspI AATATT 1 cut(s) 1063
SspMI CTAG 6 cut(s) 90, 1026, 1307, 1656, 2193, 2325
SstI GAGCTC 1 cut(s) 471
StuI AGGCCT 2 cut(s) 1836, 2323
StyD4I CCNGG 3 cut(s) 1192, 1872, 2386
StyI CCWWGG 4 cut(s) 721, 1143, 1237, 1747
SwaI ATTTAAAT 1 cut(s) 1372
TaaI ACNGT 5 cut(s) 62, 178, 709, 1137, 2420
TaiI ACGT 2 cut(s) 1716, 1983
TaqII GACCGA 1 cut(s) 2263
TatI WGTACW 4 cut(s) 604, 1286, 1731, 2157
TauI GCSGC 4 cut(s) 16, 395, 1959, 2122
TfiI GAWTC 6 cut(s) 93, 758, 1174, 1891, 2198, 2270
Tru1I TTAA 8 cut(s) 480, 645, 666, 926, 1268, 1371, 1449, 1548
Tru9I TTAA 8 cut(s) 480, 645, 666, 926, 1268, 1371, 1449, 1548
TscAI CASTG 6 cut(s) 906, 922, 1142, 1818, 2272, 2425
TseFI GTSAC 2 cut(s) 1981, 2135
TseI GCWGC 2 cut(s) 122, 2455
Tsp45I GTSAC 2 cut(s) 1981, 2135
TspDTI ATGAA 7 cut(s) 272, 569, 636, 1007, 1172, 1834, 1855
TspGWI ACGGA 4 cut(s) 1611, 1634, 1958, 2218
TspRI CASTG 6 cut(s) 906, 922, 1142, 1818, 2272, 2425
Tth111I GACNNNGTC 2 cut(s) 1712, 1964
Van91I CCANNNNNTGG 2 cut(s) 658, 1992
VpaK11BI GGWCC 1 cut(s) 548
XapI RAATTY 4 cut(s) 166, 323, 1841, 1920
XbaI TCTAGA 1 cut(s) 89
XceI RCATGY 4 cut(s) 440, 1340, 1634, 2080
XcmI CCANNNNNNNNNTGG 2 cut(s) 178, 529
XmiI GTMKAC 1 cut(s) 2073
XmnI GAANNNNTTC 1 cut(s) 942
XspI CTAG 6 cut(s) 90, 1026, 1307, 1656, 2193, 2325
ZraI GACGTC 1 cut(s) 1714
ZrmI AGTACT 1 cut(s) 1288
Zsp2I ATGCAT 3 cut(s) 196, 868, 1851
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.