AT5G51050

Belongs to the mitochondrial carrier (TC 2.A.29) family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Forward (+)
20753040 .. 20756137
3098 bp
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UTR
Exon/CDS
Intron
AT5G51050.1

Sequence Viewer

Length: 1497 bp
ATGTCGACGACTCATGTTGGTTTACCAACGAAAATGGAAGCTACGAAGTCGTCGAAACAAAATTGTTGCAACCCGGTTAAGAAACCCGGACCCGTTTCAATTGATCATGTTCTCTTAGCTCTCCGTGAGACAAGAGAAGAGCGAGATTTACGAATCAGGAGCTTATTCAGTTTCTTTGATTCTGAGAATGTTGGTTACTTAGATTGTGCTCAAATTGAGAAGGGGTTATGTGCGCTTCAAATCCCAAGTGGGTATAAATACGCTAAGGAGTTGTTTAGGGTTTGTGATGCGAATAGAGATGGGCGTGTGGATTATCATGAGTTTCGTAGATATATGGATGATAAGGAGCTTGAGCTGTATAGAATCTTTCAAGCTATTGATGTTGAGCATAATGGTTGTATTTCTCCTGAGGGACTTTGGGATTCACTCGTTAAAGCTGGGATTGAGATAAAAGATGAGGAGCTTGCTCGTTTTGTGGAACATGTTGACAAGGACAATGATGGAATCATTATGTTTGAAGAATGGAGAGATTTTCTTTTGCTGTACCCTCACGAAGCTACCATTGAAAATATATACCATCACTGGGAAAGAGTATGTCTTGTAGATATTGGAGAACAAGCTGTAATTCCAGAAGGCATCAGCAAACATATAAAGAGGAGTAACTATTTCATCGCAGGTGGCATAGCTGGTGCAGCTTCTAGGACTGCTACTGCACCTCTAGATCGCTTAAAAGTTCTTTTGCAAATTCAGAAAACCGATGCTAGAATCCGAGAAGCCATAAAGTTGATATGGAAGCAGGGTGGAGTTAGAGGTTTTTTTCGAGGTAACGGGTTGAATATTGTGAAGGTAGCACCAGAGAGTGCCATCAAGTTCTATGCATATGAGCTTTTCAAAAACGCTATCGGTGAAAACATGGGTGAAGACAAAGCGGATATAGGCACAACAGTTAGACTTTTTGCTGGAGGAATGGCTGGTGCAGTAGCTCAAGCCTCTATATACCCTTTAGATCTTGTGAAAACTCGGTTGCAGACTTACACGAGCCAAGCAGGTGTTGCTGTTCCCAGGCTTGGAACGCTCACCAAAGATATATTGGTTCATGAGGGTCCACGTGCCTTCTACAAAGGTCTTTTCCCTTCTCTTCTTGGGATTATTCCTTACGCGGGTATTGACCTTGCTGCATATGAGACATTAAAGGACTTGTCCAGGACATATATTCTTCAAGACGCTGAACCAGGTCCGCTCGTGCAACTAGGATGTGGAACAATCTCAGGAGCTCTTGGAGCAACCTGTGTCTATCCTTTGCAGGTTGTGAGAACAAGAATGCAAGCGGAACGAGCAAGAACCTCGATGTCAGGAGTATTCAGGAGAACAATAAGTGAAGAAGGTTACAGAGCACTCTACAAAGGGCTACTACCGAACCTTCTAAAGGTAGTTCCTGCTGCAAGCATTACATATATGGTTTACGAAGCAATGAAAAAGAGTCTAGAACTTGATTGA

Protein Analysis

498

Amino Acids

55.66

Weight (kDa)

7.13

Isoelectric Point (pI)

38.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EF-hand_7 PF13499 51 - 112 1.5e-06 EF-hand domain pair
EF-hand_7 PF13499 118 - 174 2.9e-07 EF-hand domain pair
Mito_carr PF00153 220 - 303 6.1e-24 Mitochondrial carrier protein
Mito_carr PF00153 315 - 401 2.6e-22 Mitochondrial carrier protein
Mito_carr PF00153 413 - 495 7.9e-24 Mitochondrial carrier protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 665, 1037
Acc36I ACCTGC 3 cut(s) 665, 1037, 1294
AccBSI CCGCTC 1 cut(s) 1240
AccI GTMKAC 1 cut(s) 5
AccII CGCG 1 cut(s) 1160
AciI CCGC 4 cut(s) 929, 1160, 1238, 1328
AcsI RAATTY 1 cut(s) 744
AcvI CACGTG 1 cut(s) 1109
AfaI GTAC 1 cut(s) 545
AfiI CCNNNNNNNGG 4 cut(s) 583, 1067, 1160, 1426
AflIII ACRYGT 1 cut(s) 481
AgsI TTSAA 8 cut(s) 99, 239, 371, 518, 566, 835, 892, 1220
AjnI CCWGG 3 cut(s) 1061, 1202, 1231
Alw21I GWGCWC 3 cut(s) 211, 1276, 1396
Alw26I GTCTC 2 cut(s) 122, 1178
ApeKI GCWGC 3 cut(s) 692, 1175, 1439
ApoI RAATTY 1 cut(s) 744
AspLEI GCGC 1 cut(s) 235
AspS9I GGNCC 3 cut(s) 89, 1103, 1235
AsuC2I CCSGG 2 cut(s) 74, 87
AsuHPI GGTGA 3 cut(s) 917, 929, 1069
AvaII GGWCC 3 cut(s) 89, 1103, 1235
AxyI CCTNAGG 1 cut(s) 408
BanII GRGCYC 1 cut(s) 1276
BauI CACGAG 2 cut(s) 1036, 1241
BbrPI CACGTG 1 cut(s) 1109
BbsI GAAGAC 1 cut(s) 927
Bbv12I GWGCWC 3 cut(s) 211, 1276, 1396
BbvI GCAGC 3 cut(s) 704, 1162, 1426
BccI CCATC 4 cut(s) 293, 494, 585, 872
BcgI CGANNNNNNTGC 2 cut(s) 1326, 1360
BciT130I CCWGG 3 cut(s) 1063, 1204, 1233
BclI TGATCA 1 cut(s) 103
BcnI CCSGG 2 cut(s) 74, 87
BcoDI GTCTC 2 cut(s) 122, 1178
BfaI CTAG 5 cut(s) 699, 719, 762, 1250, 1484
BfuAI ACCTGC 3 cut(s) 665, 1037, 1294
BglII AGATCT 1 cut(s) 1006
BisI GCNGC 3 cut(s) 693, 1176, 1440
BlsI GCNGC 3 cut(s) 694, 1177, 1441
Bme1390I CCNGG 5 cut(s) 74, 87, 1063, 1204, 1233
Bme18I GGWCC 3 cut(s) 89, 1103, 1235
BmgT120I GGNCC 3 cut(s) 89, 1103, 1235
BmiI GGNNCC 2 cut(s) 91, 1104
BmrFI CCNGG 5 cut(s) 74, 87, 1063, 1204, 1233
BmrI ACTGGG 1 cut(s) 592
BmsI GCATC 3 cut(s) 277, 645, 748
BmuI ACTGGG 1 cut(s) 592
BpiI GAAGAC 1 cut(s) 927
BpmI CTGGAG 1 cut(s) 981
Bpu10I CCTNAGC 1 cut(s) 264
BpuEI CTTGAG 2 cut(s) 371, 969
BpuMI CCSGG 2 cut(s) 74, 87
BsaAI YACGTR 1 cut(s) 1109
BsaJI CCNNGG 1 cut(s) 1061
Bsc4I CCNNNNNNNGG 4 cut(s) 583, 1067, 1160, 1426
Bse1I ACTGG 1 cut(s) 587
Bse21I CCTNAGG 1 cut(s) 408
Bse3DI GCAATG 1 cut(s) 1476
BseBI CCWGG 3 cut(s) 1063, 1204, 1233
BseDI CCNNGG 1 cut(s) 1061
BseGI GGATG 2 cut(s) 343, 1259
BseLI CCNNNNNNNGG 4 cut(s) 583, 1067, 1160, 1426
BseMI GCAATG 1 cut(s) 1476
BseMII CTCAG 3 cut(s) 174, 399, 1281
BseNI ACTGG 1 cut(s) 587
BseRI GAGGAG 2 cut(s) 473, 670
BseXI GCAGC 3 cut(s) 704, 1162, 1426
BseYI CCCAGC 1 cut(s) 437
BsgI GTGCAG 3 cut(s) 696, 711, 996
Bsh1236I CGCG 1 cut(s) 1160
BsiHKAI GWGCWC 3 cut(s) 211, 1276, 1396
BsiSI CCGG 2 cut(s) 74, 87
BslFI GGGAC 1 cut(s) 426
BslI CCNNNNNNNGG 4 cut(s) 583, 1067, 1160, 1426
BsmAI GTCTC 2 cut(s) 122, 1178
BsmFI GGGAC 1 cut(s) 426
BsmI GAATGC 1 cut(s) 1326
Bsp1286I GDGCHC 3 cut(s) 211, 1276, 1396
Bsp143I GATC 3 cut(s) 103, 721, 1006
BspACI CCGC 4 cut(s) 929, 1160, 1238, 1328
BspCNI CTCAG 3 cut(s) 175, 400, 1280
BspFNI CGCG 1 cut(s) 1160
BspHI TCATGA 2 cut(s) 316, 1096
BspLI GGNNCC 2 cut(s) 91, 1104
BspMI ACCTGC 3 cut(s) 665, 1037, 1294
BspQI GCTCTTC 1 cut(s) 132
BsrBI CCGCTC 1 cut(s) 1240
BsrDI GCAATG 1 cut(s) 1476
BsrI ACTGG 1 cut(s) 587
BssECI CCNNGG 1 cut(s) 1061
BssMI GATC 3 cut(s) 103, 721, 1006
BssSI CACGAG 2 cut(s) 1036, 1241
Bst2BI CACGAG 2 cut(s) 1036, 1241
Bst2UI CCWGG 3 cut(s) 1063, 1204, 1233
Bst4CI ACNGT 1 cut(s) 946
Bst6I CTCTTC 2 cut(s) 132, 1143
BstAPI GCANNNNNTGC 1 cut(s) 1052
BstBAI YACGTR 1 cut(s) 1109
BstC8I GCNNGC 3 cut(s) 465, 1326, 1444
BstDEI CTNAG 6 cut(s) 115, 183, 199, 264, 408, 1267
BstENI CCTNNNNNAGG 1 cut(s) 1424
BstF5I GGATG 2 cut(s) 343, 1259
BstFNI CGCG 1 cut(s) 1160
BstHHI GCGC 1 cut(s) 235
BstKTI GATC 3 cut(s) 106, 724, 1009
BstMAI GTCTC 2 cut(s) 122, 1178
BstMBI GATC 3 cut(s) 103, 721, 1006
BstMWI GCNNNNNNNGC 5 cut(s) 692, 1052, 1072, 1280, 1334
BstNI CCWGG 3 cut(s) 1063, 1204, 1233
BstNSI RCATGY 1 cut(s) 485
BstSCI CCNGG 5 cut(s) 72, 85, 1061, 1202, 1231
BstUI CGCG 1 cut(s) 1160
BstV1I GCAGC 3 cut(s) 704, 1162, 1426
BstV2I GAAGAC 1 cut(s) 927
BstX2I RGATCY 1 cut(s) 1006
BstYI RGATCY 1 cut(s) 1006
Bsu36I CCTNAGG 1 cut(s) 408
BtgZI GCGATG 1 cut(s) 655
BtsCI GGATG 2 cut(s) 343, 1259
BtsIMutI CAGTG 1 cut(s) 580
BveI ACCTGC 3 cut(s) 665, 1037, 1294
Cac8I GCNNGC 3 cut(s) 465, 1326, 1444
CciI TCATGA 2 cut(s) 316, 1096
CfoI GCGC 1 cut(s) 235
Cfr13I GGNCC 3 cut(s) 89, 1103, 1235
CseI GACGC 1 cut(s) 1232
CsiI ACCWGGT 1 cut(s) 1231
Csp6I GTAC 1 cut(s) 544
CviAII CATG 6 cut(s) 14, 107, 317, 482, 913, 1097
CviQI GTAC 1 cut(s) 544
DdeI CTNAG 6 cut(s) 115, 183, 199, 264, 408, 1267
DpnI GATC 3 cut(s) 105, 723, 1008
DpnII GATC 3 cut(s) 103, 721, 1006
Eam1104I CTCTTC 2 cut(s) 132, 1143
EarI CTCTTC 2 cut(s) 132, 1143
Ecl136II GAGCTC 1 cut(s) 1274
Eco24I GRGCYC 1 cut(s) 1276
Eco47I GGWCC 3 cut(s) 89, 1103, 1235
Eco53kI GAGCTC 1 cut(s) 1274
Eco72I CACGTG 1 cut(s) 1109
Eco81I CCTNAGG 1 cut(s) 408
EcoICRI GAGCTC 1 cut(s) 1274
EcoNI CCTNNNNNAGG 1 cut(s) 1424
EcoRII CCWGG 3 cut(s) 1061, 1202, 1231
EcoT22I ATGCAT 1 cut(s) 880
EcoT38I GRGCYC 1 cut(s) 1276
FaeI CATG 6 cut(s) 17, 110, 320, 485, 916, 1100
FaqI GGGAC 1 cut(s) 426
FatI CATG 6 cut(s) 13, 106, 316, 481, 912, 1096
FauI CCCGC 1 cut(s) 1153
FauNDI CATATG 2 cut(s) 880, 1180
FbaI TGATCA 1 cut(s) 103
FblI GTMKAC 1 cut(s) 5
Fnu4HI GCNGC 3 cut(s) 693, 1176, 1440
FokI GGATG 2 cut(s) 350, 1266
FriOI GRGCYC 1 cut(s) 1276
Fsp4HI GCNGC 3 cut(s) 693, 1176, 1440
FspBI CTAG 5 cut(s) 699, 719, 762, 1250, 1484
GlaI GCGC 1 cut(s) 234
GluI GCNGC 3 cut(s) 693, 1176, 1440
GsaI CCCAGC 1 cut(s) 441
GsuI CTGGAG 1 cut(s) 981
HapII CCGG 2 cut(s) 74, 87
HgaI GACGC 1 cut(s) 1232
HhaI GCGC 1 cut(s) 235
Hin1II CATG 6 cut(s) 17, 110, 320, 485, 916, 1100
Hin6I GCGC 1 cut(s) 233
HinP1I GCGC 1 cut(s) 233
HincII GTYRAC 2 cut(s) 6, 487
HindII GTYRAC 2 cut(s) 6, 487
HinfI GANTC 8 cut(s) 10, 153, 179, 363, 422, 504, 765, 1480
HpaII CCGG 2 cut(s) 74, 87
HphI GGTGA 3 cut(s) 917, 929, 1069
Hpy166II GTNNAC 5 cut(s) 6, 23, 487, 1106, 1462
Hpy188I TCNGA 3 cut(s) 184, 750, 770
Hpy8I GTNNAC 5 cut(s) 6, 23, 487, 1106, 1462
Hpy99I CGWCG 2 cut(s) 10, 55
HpyAV CCTTC 7 cut(s) 214, 626, 838, 1123, 1143, 1376, 1430
HpyCH4III ACNGT 1 cut(s) 946
HpyCH4IV ACGT 1 cut(s) 1108
HpyF10VI GCNNNNNNNGC 5 cut(s) 692, 1052, 1072, 1280, 1334
HpyF3I CTNAG 6 cut(s) 115, 183, 199, 264, 408, 1267
HpySE526I ACGT 1 cut(s) 1108
Hsp92II CATG 6 cut(s) 17, 110, 320, 485, 916, 1100
HspAI GCGC 1 cut(s) 233
Ksp22I TGATCA 1 cut(s) 103
Kzo9I GATC 3 cut(s) 103, 721, 1006
LguI GCTCTTC 1 cut(s) 132
LmnI GCTCC 5 cut(s) 159, 346, 460, 1271, 1280
Lsp1109I GCAGC 3 cut(s) 704, 1162, 1426
LweI GCATC 3 cut(s) 277, 645, 748
MabI ACCWGGT 1 cut(s) 1231
MaeI CTAG 5 cut(s) 699, 719, 762, 1250, 1484
MaeII ACGT 1 cut(s) 1108
MaeIII GTNAC 4 cut(s) 194, 659, 824, 1385
MalI GATC 3 cut(s) 105, 723, 1008
MbiI CCGCTC 1 cut(s) 1240
MboI GATC 3 cut(s) 103, 721, 1006
MboII GAAGA 6 cut(s) 149, 530, 932, 1130, 1208, 1391
MfeI CAATTG 1 cut(s) 99
MflI RGATCY 1 cut(s) 1006
MhlI GDGCHC 3 cut(s) 211, 1276, 1396
MluCI AATT 5 cut(s) 61, 99, 213, 624, 744
MlyI GAGTC 2 cut(s) 4, 1489
Mph1103I ATGCAT 1 cut(s) 880
MseI TTAA 4 cut(s) 78, 432, 728, 1190
MspI CCGG 2 cut(s) 74, 87
MspR9I CCNGG 5 cut(s) 74, 87, 1063, 1204, 1233
MunI CAATTG 1 cut(s) 99
Mva1269I GAATGC 1 cut(s) 1326
MvaI CCWGG 3 cut(s) 1063, 1204, 1233
MvnI CGCG 1 cut(s) 1160
MwoI GCNNNNNNNGC 5 cut(s) 692, 1052, 1072, 1280, 1334
NciI CCSGG 2 cut(s) 74, 87
NdeI CATATG 2 cut(s) 880, 1180
NdeII GATC 3 cut(s) 103, 721, 1006
NlaIII CATG 6 cut(s) 17, 110, 320, 485, 916, 1100
NlaIV GGNNCC 2 cut(s) 91, 1104
NsiI ATGCAT 1 cut(s) 880
NspI RCATGY 1 cut(s) 485
PagI TCATGA 2 cut(s) 316, 1096
PaqCI CACCTGC 2 cut(s) 665, 1037
PciI ACATGT 1 cut(s) 481
PciSI GCTCTTC 1 cut(s) 132
PcsI WCGNNNNNNNCGW 1 cut(s) 50
PctI GAATGC 1 cut(s) 1326
PfeI GAWTC 6 cut(s) 153, 179, 363, 422, 504, 765
PfoI TCCNGGA 1 cut(s) 1202
PkrI GCNGC 3 cut(s) 694, 1177, 1441
PleI GAGTC 2 cut(s) 4, 1488
PmaCI CACGTG 1 cut(s) 1109
PmlI CACGTG 1 cut(s) 1109
PpsI GAGTC 2 cut(s) 4, 1488
Ppu21I YACGTR 1 cut(s) 1109
PscI ACATGT 1 cut(s) 481
Psp124BI GAGCTC 1 cut(s) 1276
Psp6I CCWGG 3 cut(s) 1061, 1202, 1231
PspCI CACGTG 1 cut(s) 1109
PspFI CCCAGC 1 cut(s) 437
PspGI CCWGG 3 cut(s) 1061, 1202, 1231
PspN4I GGNNCC 2 cut(s) 91, 1104
PspPI GGNCC 3 cut(s) 89, 1103, 1235
PsuI RGATCY 1 cut(s) 1006
RsaI GTAC 1 cut(s) 545
RsaNI GTAC 1 cut(s) 544
SacI GAGCTC 1 cut(s) 1276
SalI GTCGAC 1 cut(s) 4
SapI GCTCTTC 1 cut(s) 132
SaqAI TTAA 4 cut(s) 78, 432, 728, 1190
SatI GCNGC 3 cut(s) 693, 1176, 1440
Sau3AI GATC 3 cut(s) 103, 721, 1006
Sau96I GGNCC 3 cut(s) 89, 1103, 1235
SchI GAGTC 2 cut(s) 4, 1489
ScrFI CCNGG 5 cut(s) 74, 87, 1063, 1204, 1233
SduI GDGCHC 3 cut(s) 211, 1276, 1396
SexAI ACCWGGT 1 cut(s) 1231
SfaNI GCATC 3 cut(s) 277, 645, 748
SinI GGWCC 3 cut(s) 89, 1103, 1235
SmlI CTYRAG 2 cut(s) 350, 984
SmoI CTYRAG 2 cut(s) 350, 984
Sse9I AATT 5 cut(s) 61, 99, 213, 624, 744
SsiI CCGC 4 cut(s) 929, 1160, 1238, 1328
SspI AATATT 1 cut(s) 838
SspMI CTAG 5 cut(s) 699, 719, 762, 1250, 1484
SstI GAGCTC 1 cut(s) 1276
StyD4I CCNGG 5 cut(s) 72, 85, 1061, 1202, 1231
TaaI ACNGT 1 cut(s) 946
TaiI ACGT 1 cut(s) 1111
TaqI TCGA 4 cut(s) 5, 53, 820, 1346
TasI AATT 5 cut(s) 61, 99, 213, 624, 744
TfiI GAWTC 6 cut(s) 153, 179, 363, 422, 504, 765
Tru1I TTAA 4 cut(s) 78, 432, 728, 1190
Tru9I TTAA 4 cut(s) 78, 432, 728, 1190
TscAI CASTG 1 cut(s) 587
TseI GCWGC 3 cut(s) 692, 1175, 1439
TspDTI ATGAA 3 cut(s) 658, 1085, 1487
TspGWI ACGGA 1 cut(s) 113
TspRI CASTG 1 cut(s) 587
VpaK11BI GGWCC 3 cut(s) 89, 1103, 1235
XagI CCTNNNNNAGG 1 cut(s) 1424
XapI RAATTY 1 cut(s) 744
XbaI TCTAGA 2 cut(s) 718, 1483
XceI RCATGY 1 cut(s) 485
XcmI CCANNNNNNNNNTGG 1 cut(s) 1087
XmiI GTMKAC 1 cut(s) 5
XspI CTAG 5 cut(s) 699, 719, 762, 1250, 1484
Zsp2I ATGCAT 1 cut(s) 880
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.