Rorug02G0596400

Belongs to the mitochondrial carrier (TC 2.A.29) family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Reverse (-)
71710829 .. 71722633
11805 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0596400.1

Sequence Viewer

Length: 3180 bp
ATGGAGAAGAAGATTAAGATTGGGGTTTGTGTGATGGAAAAGAAGGTGTTCTCGGCGCCGATGGGGCAGATTCTCGAGCGCCTTCAGGAATTTGGCGAATTCGAGATTACACATTTCGGTGACAAGGTCATTCTGGAAGATCCGGTTGAGAGCTGGCCGATTTGTGATTGCTTGATTGCCTTCCATTCCTCTGGCTATCCTCTGGAAAAGGCTGAAGCATATGCTAATTTAAGGAAACCTTTTCTTGTAAACGAGTTGGAGCCGCAACACCTTCTTCATGACCGAAGGAAGGTATATGAGCGTCTTGAAATGTTTGGAATTCCTGTTCCGAGATATGCCCTTGTAAATAGAGAAGCACCATATCAAGAGCTTGACTATTTTGTTGAGGAAGAAGATTTTGTTGAGGTTCATGGTCAACGTTTCTGGAAGCCATTTGTGGAGAAGCCTGTTGAGGGGAATGATCACAGTATAATGATATATTACCCTAGCTCGGCAGGTGGAGGAATGAAGGAGTTGTTTAGGAAGGTTGGTAACCGATCTAGTGAGTTCCATCCAGAGGTGAGAAGAGTGAGACGAGAAGGCTCCTATATATATGAGGAATTCATGCCAACTGGAGGCACAGATGTCAAGGTGTACACGGTGGGCCCTGAATATGCGCATGCTGAGGCAAGGAAATCTCCTGTTGTAGATGGTGTTGTCATGAGAAATCCTGATGGCAAGGAAGTGAGATATCCTGTTTTACTGACACCTACGGAGAAGCAAATGGCAAGGGAGGTCTGCATTGCATTTAGGCAAGCGGTTTGTGGGTTCGATCTTTTACGTTGCGAGGGACGCTCCTATGTCTGTGATGTGAATGGATGGAGTTTCGTGAAGAATTCCTATAAGTATTATGATGATGCTGCTTGTGTGCTCAGGAAGATATTTATAGATGCTAAAGCTCCTCATCTTTCTTCTGTAATTCCACCAACTTTACCATGGAAAATCAATGAACCAAGCCAACCTTCTGAGGGGCTAACTCGCCAAGGAAGTGGAATCATTGGCACATTTGGGCAGGCTGAGGAACTACGTTGCGTAATTGCCATTATTCGTCATGGTGATAGAACTCCCAAACAGAAAGTAAAGCTGAAGGTTACCGAGGAAAAGCTTCTAAACTTGATGCTAAAGTACAATGGGGGCCGACCTAGATCTGAGACAAAAATGAAAAGTGCTATCCAATTGCAAGATTTGTTGGATGCCACACGGATGCTTGTACCTCGTTCTAGACCAGGTCGAGAAAGTGACAGTGAGGCAGAAGACATTGAGCACGCTGAAAAGCTTCGTCAAGTTAAAGCAGTGCTCGAGGAGGGGGGACACTTCTCTGGCATTTATAGGAAAGTTCAGCTAAAGCCGCTGAAGTGGGATAAAGTTGCTAAAAGTAATGGTGAAGGTGAGGAAGAACGCCCTGTTGAAGCTTTGATGGTTCTTAAGTACGGGGGTGTCCTTACACATGCCGGCAGAAAGCAGGCTGAGGAACTGGGTAGATATTTTCGGAATAACATGTATCCAGGTGAAGGTACTGGCCTGCTTCGCCTTCATAGCACCTATCGCCATGATCTTAAAATCTACAGCTCTGATGAGGGCCGTGTGCAGATGTCTGCAGCTGCATTTGCCAAAGGCCTACTTGATCTAGAAGGGCAGCTAACACCAATCCTGGTTTCTCTTGTTAGCAAGGACTCCTCTATGTTGGATGGACTTGAAAATGCAAGTGTTGAGATGGAGGAAGCAAAGGCTAGGTTGAACGAGATTATAACTTCAGGTGTAAAGACAGCTCAAAGCAATGGAATACCTCCTTGGATGGCTGATGGAGGGGGACTGACACCAAATGCTTTGGAGCTTCTACCTGACTTGGTAAAGTTAACTAAGAAGGTCACTGAACAAGTAAGACAGCTAGCCAAGGATGAAGATGAGGAACTTATGACAAGCTCATATGACGTGATACTTCCTTATGACCAAGCAAAGGCCCTTGGTAAGACTAACATTGACGTTGATCGTATTGCTGCTGGATTACCCTGTGGTAGCGAGGGATTCCTGTTGATGTATGCTCGTTGGAGAAAGCTTGTAAGGGACTTGTACAATGAACGAAAAGAACGGTTCGACATAACGCAGATCCCAGATGTTTATGACTCCTGCAAATATGATCTTCTACACAACGGGCATCTGAATTTAGACGGTCTAGATGAGCTCTTCAAAGTTGCCCAGTTACTTGCTGATGGTGTCATCCCAAATGAGTATGGCATCAATCCAACACAGAAGCTCAAGATTGGTTCCAAGATCGCTCGTCGTTTACTGGGTAAAATAATGATTGATCTGAGGAATACTCGTGAAGAAGCCATCAGCATTGCAGAACCAAAGAGTACTCAGGATGAACCTTTGAAGTTAACAATTTCAGAGAAAGACGATAAGGAATACCACACAAAGCTTAATGTGAAGAATGATGACAGAAAATGTAGCACAAGTGATGTACCAAAGCTTCACAATAAGAATGAAGATACGAGGAGATCTAGTATTTCAAGTGAGATATCAATGGATCAGGAGGATGATGATGATAAAGAGATCAAATATCGTTTGGACCCGAAGTATGCAAATGTCAGAACACCTGAACGTCATGTTCGAACACGCCTTTACTTTACATCAGAATCTCATATCCATTCTCTAATGAATGTTCTCCGCTACTGCAACCTGGATGAATCTCTTCAAGGAGAGGATGGCCTTGTTTGTGAAAGTGCTTTAGAGCGTTTATACAACACTAAAGAGCTTGACTACATGAGTTATATAGTGCTGAGGATGTTCGAGAACACAGAAGTAGCCTTAGAAGACCCAAAAAGATTTCGTGTAGAAATGACCTTTAGTCGTGGTGCAGATCTATCGCCATTGGAGAAAAATGACGGTGAAGCTGCTTCATTGCATCAAGAGCACACACTGCCGATACTGGGTCCAGAGAGGCTGCAAGAAGTGGGATCGTATCTCACATTCGATAAAATGGAGAAAATGATTCGGTCATTTGCTATGCCAGCGGAAGATTTTCCTCCACCATCAACTCCAGCAGGATTCTCGGGCTATTTCTCGAAGAGTGCAGCAGTGCTAGAGCGCCTGGTAAATCTCTGGCCTTTCCATAAGCATGCTAGTTCTAATGGAAAGTAG

Protein Analysis

1059

Amino Acids

120.38

Weight (kDa)

5.92

Isoelectric Point (pI)

44.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPIP5K2_N PF18086 5 - 94 8.7e-39 Diphosphoinositol pentakisphosphate kinase 2 N-terminal domain
His_Phos_2 PF00328 354 - 962 1.5e-70 Histidine phosphatase superfamily (branch 2)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1787
AarI CACCTGC 1 cut(s) 485
Acc16I TGCGCA 1 cut(s) 657
Acc36I ACCTGC 1 cut(s) 485
AccB1I GGYRCC 1 cut(s) 55
AciI CCGC 5 cut(s) 263, 797, 1388, 2707, 3053
AclI AACGTT 1 cut(s) 418
AclWI GGATC 4 cut(s) 134, 2140, 2574, 3004
AcoI YGGCCR 1 cut(s) 155
AcsI RAATTY 6 cut(s) 89, 98, 318, 599, 874, 2200
AcuI CTGAAG 5 cut(s) 68, 234, 1145, 1412, 1776
AcyI GRCGYC 1 cut(s) 56
AfaI GTAC 8 cut(s) 635, 1166, 1251, 1469, 1555, 2111, 2395, 2502
AfiI CCNNNNNNNGG 9 cut(s) 289, 452, 490, 556, 614, 1007, 1550, 1996, 2969
AflII CTTAAG 1 cut(s) 1463
AflIII ACRYGT 1 cut(s) 1536
AgsI TTSAA 8 cut(s) 308, 1448, 1736, 1777, 2227, 2413, 2550, 2735
AhdI GACNNNNNGTC 1 cut(s) 2886
AjiI CACGTC 1 cut(s) 1972
AjnI CCWGG 5 cut(s) 1264, 1543, 1689, 2718, 3129
AjuI GAANNNNNNNTTGG 6 cut(s) 985, 1017, 1678, 1710, 1813, 1845
AloI GAACNNNNNNTCC 2 cut(s) 309, 341
Alw21I GWGCWC 5 cut(s) 912, 1305, 1338, 2223, 2955
Alw26I GTCTC 2 cut(s) 565, 1184
AlwI GGATC 4 cut(s) 134, 2140, 2574, 3004
Ama87I CYCGRG 3 cut(s) 74, 1337, 3091
AoxI GGCC 9 cut(s) 155, 643, 1174, 1558, 1618, 1654, 1998, 2746, 3143
ApaI GGGCCC 1 cut(s) 647
ApeKI GCWGC 8 cut(s) 899, 1637, 1640, 1675, 2036, 2933, 2983, 3113
ApoI RAATTY 6 cut(s) 89, 98, 318, 599, 874, 2200
Asp700I GAANNNNTTC 5 cut(s) 47, 1143, 1314, 2730, 3060
AspLEI GCGC 4 cut(s) 58, 81, 658, 3129
AspS9I GGNCC 7 cut(s) 643, 644, 1174, 1618, 1999, 2608, 2972
AsuHPI GGTGA 7 cut(s) 131, 571, 1106, 1433, 1439, 1559, 2939
AsuII TTCGAA 1 cut(s) 2650
AsuNHI GCTAGC 1 cut(s) 1927
AvaI CYCGRG 3 cut(s) 74, 1337, 3091
AvaII GGWCC 2 cut(s) 2608, 2972
BaeGI GKGCMC 1 cut(s) 647
BanI GGYRCC 1 cut(s) 55
BanII GRGCYC 2 cut(s) 647, 2223
BarI GAAGNNNNNNTAC 2 cut(s) 2493, 2525
BauI CACGAG 1 cut(s) 2358
BbsI GAAGAC 2 cut(s) 1299, 2859
Bbv12I GWGCWC 5 cut(s) 912, 1305, 1338, 2223, 2955
BbvCI CCTCAGC 4 cut(s) 663, 1056, 1506, 2819
BbvI GCAGC 8 cut(s) 886, 1627, 1649, 1687, 2023, 2920, 2970, 3125
BceAI ACGGC 1 cut(s) 1605
BcgI CGANNNNNNTGC 4 cut(s) 2886, 2920, 3072, 3106
BciT130I CCWGG 5 cut(s) 1266, 1545, 1691, 2720, 3131
BciVI GTATCC 1 cut(s) 1551
BclI TGATCA 1 cut(s) 460
BcoDI GTCTC 2 cut(s) 565, 1184
BfmI CTRYAG 2 cut(s) 1603, 1635
BfoI RGCGCY 3 cut(s) 59, 82, 3130
BfrI CTTAAG 1 cut(s) 1463
BfuAI ACCTGC 1 cut(s) 485
BfuI GTATCC 1 cut(s) 1551
BglI GCCNNNNNGGC 1 cut(s) 64
BglII AGATCT 3 cut(s) 1184, 2537, 2899
BmcAI AGTACT 1 cut(s) 2395
Bme1390I CCNGG 5 cut(s) 1266, 1545, 1691, 2720, 3131
Bme18I GGWCC 2 cut(s) 2608, 2972
BmeRI GACNNNNNGTC 1 cut(s) 2886
BmeT110I CYCGRG 3 cut(s) 74, 1337, 3091
BmgBI CACGTC 1 cut(s) 1972
BmgT120I GGNCC 7 cut(s) 643, 644, 1174, 1618, 1999, 2608, 2972
BmiI GGNNCC 8 cut(s) 57, 261, 583, 645, 1175, 2305, 2610, 2973
BmrFI CCNGG 5 cut(s) 1266, 1545, 1691, 2720, 3131
BmrI ACTGGG 4 cut(s) 1523, 2230, 2336, 2978
BmsI GCATC 8 cut(s) 886, 919, 1146, 1222, 1233, 2203, 2283, 2953
BmtI GCTAGC 1 cut(s) 1931
BmuI ACTGGG 4 cut(s) 1523, 2230, 2336, 2978
BpiI GAAGAC 2 cut(s) 1299, 2859
BplI GAGNNNNNCTC 4 cut(s) 818, 850, 2341, 2373
BpmI CTGGAG 2 cut(s) 633, 3063
Bpu10I CCTNAGC 5 cut(s) 663, 911, 1056, 1506, 2819
Bpu14I TTCGAA 1 cut(s) 2650
BpuEI CTTGAG 1 cut(s) 2279
BsaHI GRCGYC 1 cut(s) 56
BsaJI CCNNGG 6 cut(s) 974, 1021, 1134, 1829, 1932, 2002
BsaWI WCCGGW 1 cut(s) 142
BsaXI ACNNNNNCTCC 2 cut(s) 2527, 2557
Bsc4I CCNNNNNNNGG 9 cut(s) 289, 452, 490, 556, 614, 1007, 1550, 1996, 2969
Bse118I RCCGGY 1 cut(s) 1490
Bse1I ACTGG 6 cut(s) 616, 1518, 1561, 2236, 2331, 2973
Bse3DI GCAATG 4 cut(s) 780, 1822, 2376, 2939
BseBI CCWGG 5 cut(s) 1266, 1545, 1691, 2720, 3131
BseDI CCNNGG 6 cut(s) 974, 1021, 1134, 1829, 1932, 2002
BseLI CCNNNNNNNGG 9 cut(s) 289, 452, 490, 556, 614, 1007, 1550, 1996, 2969
BseMI GCAATG 4 cut(s) 780, 1822, 2376, 2939
BseMII CTCAG 9 cut(s) 654, 925, 996, 1047, 1179, 1497, 2339, 2411, 2810
BseNI ACTGG 6 cut(s) 616, 1518, 1561, 2236, 2331, 2973
BseRI GAGGAG 4 cut(s) 930, 1355, 1705, 2548
BseSI GKGCMC 1 cut(s) 647
BseXI GCAGC 8 cut(s) 886, 1627, 1649, 1687, 2023, 2920, 2970, 3125
BsgI GTGCAG 3 cut(s) 1646, 2916, 3132
BshFI GGCC 9 cut(s) 157, 645, 1176, 1560, 1620, 1656, 2000, 2748, 3145
BshNI GGYRCC 1 cut(s) 55
BsiHKAI GWGCWC 5 cut(s) 912, 1305, 1338, 2223, 2955
BsiHKCI CYCGRG 3 cut(s) 74, 1337, 3091
BsiSI CCGG 2 cut(s) 143, 1491
BslFI GGGAC 4 cut(s) 843, 1362, 1863, 2117
BslI CCNNNNNNNGG 9 cut(s) 289, 452, 490, 556, 614, 1007, 1550, 1996, 2969
BsmAI GTCTC 2 cut(s) 565, 1184
BsmBI CGTCTC 1 cut(s) 565
BsmFI GGGAC 4 cut(s) 843, 1362, 1863, 2117
BsnI GGCC 9 cut(s) 157, 645, 1176, 1560, 1620, 1656, 2000, 2748, 3145
BsoBI CYCGRG 3 cut(s) 74, 1337, 3091
Bsp119I TTCGAA 1 cut(s) 2650
Bsp120I GGGCCC 1 cut(s) 643
Bsp1286I GDGCHC 6 cut(s) 647, 912, 1305, 1338, 2223, 2955
Bsp1407I TGTACA 2 cut(s) 633, 2109
Bsp19I CCATGG 1 cut(s) 974
BspACI CCGC 5 cut(s) 263, 797, 1388, 2707, 3053
BspANI GGCC 9 cut(s) 157, 645, 1176, 1560, 1620, 1656, 2000, 2748, 3145
BspCNI CTCAG 9 cut(s) 655, 924, 997, 1048, 1180, 1498, 2340, 2410, 2811
BspHI TCATGA 2 cut(s) 277, 699
BspLI GGNNCC 8 cut(s) 57, 261, 583, 645, 1175, 2305, 2610, 2973
BspMAI CTGCAG 1 cut(s) 1639
BspMI ACCTGC 1 cut(s) 485
BspOI GCTAGC 1 cut(s) 1931
BspPI GGATC 4 cut(s) 134, 2140, 2574, 3004
BspQI GCTCTTC 1 cut(s) 2228
BspT104I TTCGAA 1 cut(s) 2650
BspT107I GGYRCC 1 cut(s) 55
BspTI CTTAAG 1 cut(s) 1463
BsrDI GCAATG 4 cut(s) 780, 1822, 2376, 2939
BsrFI RCCGGY 1 cut(s) 1490
BsrGI TGTACA 2 cut(s) 633, 2109
BsrI ACTGG 6 cut(s) 616, 1518, 1561, 2236, 2331, 2973
BssAI RCCGGY 1 cut(s) 1490
BssECI CCNNGG 6 cut(s) 974, 1021, 1134, 1829, 1932, 2002
BssNI GRCGYC 1 cut(s) 56
BssSI CACGAG 1 cut(s) 2358
BssT1I CCWWGG 5 cut(s) 974, 1021, 1829, 1932, 2002
Bst2BI CACGAG 1 cut(s) 2358
Bst2UI CCWGG 5 cut(s) 1266, 1545, 1691, 2720, 3131
Bst4CI ACNGT 6 cut(s) 467, 640, 1283, 2130, 2210, 2927
Bst6I CTCTTC 4 cut(s) 559, 2228, 2736, 3101
BstACI GRCGYC 1 cut(s) 56
BstAFI CTTAAG 1 cut(s) 1463
BstAPI GCANNNNNTGC 1 cut(s) 2959
BstAUI TGTACA 2 cut(s) 633, 2109
BstBI TTCGAA 1 cut(s) 2650
BstDSI CCRYGG 1 cut(s) 974
BstEII GGTNACC 2 cut(s) 530, 1129
BstH2I RGCGCY 3 cut(s) 59, 82, 3130
BstHHI GCGC 4 cut(s) 58, 81, 658, 3129
BstMAI GTCTC 2 cut(s) 565, 1184
BstNI CCWGG 5 cut(s) 1266, 1545, 1691, 2720, 3131
BstNSI RCATGY 4 cut(s) 662, 1490, 1540, 3161
BstPI GGTNACC 2 cut(s) 530, 1129
BstSCI CCNGG 5 cut(s) 1264, 1543, 1689, 2718, 3129
BstSFI CTRYAG 2 cut(s) 1603, 1635
BstSLI GKGCMC 1 cut(s) 647
BstV1I GCAGC 8 cut(s) 886, 1627, 1649, 1687, 2023, 2920, 2970, 3125
BstV2I GAAGAC 2 cut(s) 1299, 2859
BstX2I RGATCY 5 cut(s) 139, 1184, 2145, 2537, 2899
BstXI CCANNNNNNTGG 2 cut(s) 191, 1028
BstYI RGATCY 5 cut(s) 139, 1184, 2145, 2537, 2899
BsuI GTATCC 1 cut(s) 1551
BsuRI GGCC 9 cut(s) 157, 645, 1176, 1560, 1620, 1656, 2000, 2748, 3145
BtgI CCRYGG 1 cut(s) 974
BtrI CACGTC 1 cut(s) 1972
BtsI GCAGTG 3 cut(s) 1338, 2957, 3123
BtsIMutI CAGTG 5 cut(s) 1288, 1338, 1908, 2957, 3123
BveI ACCTGC 1 cut(s) 485
CciI TCATGA 2 cut(s) 277, 699
CfoI GCGC 4 cut(s) 58, 81, 658, 3129
Cfr10I RCCGGY 1 cut(s) 1490
Cfr13I GGNCC 7 cut(s) 643, 644, 1174, 1618, 1999, 2608, 2972
CseI GACGC 2 cut(s) 290, 840
CsiI ACCWGGT 1 cut(s) 1264
Csp6I GTAC 8 cut(s) 634, 1165, 1250, 1468, 1554, 2110, 2394, 2501
CviQI GTAC 8 cut(s) 634, 1165, 1250, 1468, 1554, 2110, 2394, 2501
DinI GGCGCC 1 cut(s) 57
DriI GACNNNNNGTC 1 cut(s) 2886
EaeI YGGCCR 1 cut(s) 155
Eam1104I CTCTTC 4 cut(s) 559, 2228, 2736, 3101
Eam1105I GACNNNNNGTC 1 cut(s) 2886
EarI CTCTTC 4 cut(s) 559, 2228, 2736, 3101
Ecl136II GAGCTC 1 cut(s) 2221
Eco130I CCWWGG 5 cut(s) 974, 1021, 1829, 1932, 2002
Eco147I AGGCCT 1 cut(s) 1656
Eco24I GRGCYC 2 cut(s) 647, 2223
Eco32I GATATC 2 cut(s) 731, 2559
Eco47I GGWCC 2 cut(s) 2608, 2972
Eco53kI GAGCTC 1 cut(s) 2221
Eco57I CTGAAG 5 cut(s) 68, 234, 1145, 1412, 1776
Eco88I CYCGRG 3 cut(s) 74, 1337, 3091
Eco91I GGTNACC 2 cut(s) 530, 1129
EcoICRI GAGCTC 1 cut(s) 2221
EcoO109I RGGNCCY 2 cut(s) 644, 1999
EcoO65I GGTNACC 2 cut(s) 530, 1129
EcoRI GAATTC 4 cut(s) 98, 318, 599, 874
EcoRII CCWGG 5 cut(s) 1264, 1543, 1689, 2718, 3129
EcoRV GATATC 2 cut(s) 731, 2559
EcoT14I CCWWGG 5 cut(s) 974, 1021, 1829, 1932, 2002
EcoT38I GRGCYC 2 cut(s) 647, 2223
EgeI GGCGCC 1 cut(s) 57
EheI GGCGCC 1 cut(s) 57
ErhI CCWWGG 5 cut(s) 974, 1021, 1829, 1932, 2002
Esp3I CGTCTC 1 cut(s) 565
FalI AAGNNNNNCTT 6 cut(s) 223, 255, 985, 1017, 1644, 1676
FaqI GGGAC 4 cut(s) 843, 1362, 1863, 2117
FauNDI CATATG 2 cut(s) 220, 1966
FbaI TGATCA 1 cut(s) 460
FriOI GRGCYC 2 cut(s) 647, 2223
FspAI RTGCGCAY 1 cut(s) 657
FspI TGCGCA 1 cut(s) 657
GlaI GCGC 4 cut(s) 57, 80, 657, 3128
GsuI CTGGAG 2 cut(s) 633, 3063
HaeII RGCGCY 3 cut(s) 59, 82, 3130
HaeIII GGCC 9 cut(s) 157, 645, 1176, 1560, 1620, 1656, 2000, 2748, 3145
HapII CCGG 2 cut(s) 143, 1491
HgaI GACGC 2 cut(s) 290, 840
HhaI GCGC 4 cut(s) 58, 81, 658, 3129
Hin1I GRCGYC 1 cut(s) 56
Hin6I GCGC 4 cut(s) 56, 79, 656, 3127
HinP1I GCGC 4 cut(s) 56, 79, 656, 3127
HincII GTYRAC 3 cut(s) 416, 1896, 2418
HindII GTYRAC 3 cut(s) 416, 1896, 2418
HindIII AAGCTT 6 cut(s) 1142, 1313, 1449, 2093, 2456, 2507
HinfI GANTC 9 cut(s) 70, 1032, 1712, 2064, 2162, 2675, 2726, 3031, 3087
HpaI GTTAAC 2 cut(s) 1896, 2418
HpaII CCGG 2 cut(s) 143, 1491
HphI GGTGA 7 cut(s) 131, 571, 1106, 1433, 1439, 1559, 2939
Hpy166II GTNNAC 7 cut(s) 250, 416, 634, 636, 1896, 2324, 2418
Hpy8I GTNNAC 7 cut(s) 250, 416, 634, 636, 1896, 2324, 2418
Hpy99I CGWCG 1 cut(s) 2322
HpyCH4III ACNGT 6 cut(s) 467, 640, 1283, 2130, 2210, 2927
HpyCH4IV ACGT 6 cut(s) 418, 820, 1066, 1971, 2022, 2641
HpySE526I ACGT 6 cut(s) 418, 820, 1066, 1971, 2022, 2641
Hsp92I GRCGYC 1 cut(s) 56
HspAI GCGC 4 cut(s) 56, 79, 656, 3127
KasI GGCGCC 1 cut(s) 55
KroI GCCGGC 1 cut(s) 1490
KroNI GCCGGC 1 cut(s) 1492
Ksp22I TGATCA 1 cut(s) 460
KspAI GTTAAC 2 cut(s) 1896, 2418
LguI GCTCTTC 1 cut(s) 2228
LmnI GCTCC 5 cut(s) 259, 587, 839, 943, 1870
Lsp1109I GCAGC 8 cut(s) 886, 1627, 1649, 1687, 2023, 2920, 2970, 3125
LweI GCATC 8 cut(s) 886, 919, 1146, 1222, 1233, 2203, 2283, 2953
MabI ACCWGGT 1 cut(s) 1264
MaeII ACGT 6 cut(s) 418, 820, 1066, 1971, 2022, 2641
MaeIII GTNAC 6 cut(s) 119, 530, 1129, 1277, 1906, 2238
MfeI CAATTG 1 cut(s) 1214
MflI RGATCY 5 cut(s) 139, 1184, 2145, 2537, 2899
MhlI GDGCHC 6 cut(s) 647, 912, 1305, 1338, 2223, 2955
Mly113I GGCGCC 1 cut(s) 56
MlyI GAGTC 2 cut(s) 1706, 2156
MmeI TCCRAC 5 cut(s) 237, 1209, 1704, 2066, 2306
MroNI GCCGGC 1 cut(s) 1490
MroXI GAANNNNTTC 5 cut(s) 47, 1143, 1314, 2730, 3060
MseI TTAA 8 cut(s) 15, 230, 1326, 1464, 1596, 1895, 2417, 2460
MslI CAYNNNNRTG 3 cut(s) 117, 1241, 3156
MspA1I CMGCKG 3 cut(s) 1390, 1640, 3053
MspCI CTTAAG 1 cut(s) 1463
MspI CCGG 2 cut(s) 143, 1491
MspR9I CCNGG 5 cut(s) 1266, 1545, 1691, 2720, 3131
MunI CAATTG 1 cut(s) 1214
MvaI CCWGG 5 cut(s) 1266, 1545, 1691, 2720, 3131
NaeI GCCGGC 1 cut(s) 1492
NarI GGCGCC 1 cut(s) 56
NcoI CCATGG 1 cut(s) 974
NdeI CATATG 2 cut(s) 220, 1966
NgoMIV GCCGGC 1 cut(s) 1490
NheI GCTAGC 1 cut(s) 1927
NlaIV GGNNCC 8 cut(s) 57, 261, 583, 645, 1175, 2305, 2610, 2973
NmeAIII GCCGAG 2 cut(s) 32, 470
NmuCI GTSAC 3 cut(s) 119, 1277, 1906
NsbI TGCGCA 1 cut(s) 657
NspI RCATGY 4 cut(s) 662, 1490, 1540, 3161
NspV TTCGAA 1 cut(s) 2650
PaeI GCATGC 2 cut(s) 662, 3161
PaeR7I CTCGAG 2 cut(s) 74, 1337
PagI TCATGA 2 cut(s) 277, 699
PaqCI CACCTGC 1 cut(s) 485
PceI AGGCCT 1 cut(s) 1656
PciI ACATGT 1 cut(s) 1536
PciSI GCTCTTC 1 cut(s) 2228
PcsI WCGNNNNNNNCGW 1 cut(s) 2647
PdiI GCCGGC 1 cut(s) 1492
PdmI GAANNNNTTC 5 cut(s) 47, 1143, 1314, 2730, 3060
PfeI GAWTC 7 cut(s) 70, 1032, 2064, 2675, 2726, 3031, 3087
PflFI GACNNNGTC 2 cut(s) 125, 1266
PleI GAGTC 2 cut(s) 1706, 2156
PluTI GGCGCC 1 cut(s) 59
PpsI GAGTC 2 cut(s) 1706, 2156
PscI ACATGT 1 cut(s) 1536
PsiI TTATAA 1 cut(s) 1787
Psp124BI GAGCTC 1 cut(s) 2223
Psp1406I AACGTT 1 cut(s) 418
Psp6I CCWGG 5 cut(s) 1264, 1543, 1689, 2718, 3129
PspEI GGTNACC 2 cut(s) 530, 1129
PspGI CCWGG 5 cut(s) 1264, 1543, 1689, 2718, 3129
PspN4I GGNNCC 8 cut(s) 57, 261, 583, 645, 1175, 2305, 2610, 2973
PspOMI GGGCCC 1 cut(s) 643
PspPI GGNCC 7 cut(s) 643, 644, 1174, 1618, 1999, 2608, 2972
PspXI VCTCGAGB 1 cut(s) 1337
PstI CTGCAG 1 cut(s) 1639
PsuI RGATCY 5 cut(s) 139, 1184, 2145, 2537, 2899
PsyI GACNNNGTC 2 cut(s) 125, 1266
PvuII CAGCTG 1 cut(s) 1640
RsaI GTAC 8 cut(s) 635, 1166, 1251, 1469, 1555, 2111, 2395, 2502
RsaNI GTAC 8 cut(s) 634, 1165, 1250, 1468, 1554, 2110, 2394, 2501
RseI CAYNNNNRTG 3 cut(s) 117, 1241, 3156
SacI GAGCTC 1 cut(s) 2223
SapI GCTCTTC 1 cut(s) 2228
SaqAI TTAA 8 cut(s) 15, 230, 1326, 1464, 1596, 1895, 2417, 2460
Sau96I GGNCC 7 cut(s) 643, 644, 1174, 1618, 1999, 2608, 2972
ScaI AGTACT 1 cut(s) 2395
SchI GAGTC 2 cut(s) 1706, 2156
ScrFI CCNGG 5 cut(s) 1266, 1545, 1691, 2720, 3131
SduI GDGCHC 6 cut(s) 647, 912, 1305, 1338, 2223, 2955
SexAI ACCWGGT 1 cut(s) 1264
SfaNI GCATC 8 cut(s) 886, 919, 1146, 1222, 1233, 2203, 2283, 2953
SfcI CTRYAG 2 cut(s) 1603, 1635
SfoI GGCGCC 1 cut(s) 57
Sfr274I CTCGAG 2 cut(s) 74, 1337
SfuI TTCGAA 1 cut(s) 2650
SinI GGWCC 2 cut(s) 2608, 2972
SlaI CTCGAG 2 cut(s) 74, 1337
SmiMI CAYNNNNRTG 3 cut(s) 117, 1241, 3156
SmlI CTYRAG 4 cut(s) 74, 1337, 1463, 2294
SmoI CTYRAG 4 cut(s) 74, 1337, 1463, 2294
SphI GCATGC 2 cut(s) 662, 3161
SseBI AGGCCT 1 cut(s) 1656
SsiI CCGC 5 cut(s) 263, 797, 1388, 2707, 3053
SspDI GGCGCC 1 cut(s) 55
SstI GAGCTC 1 cut(s) 2223
StuI AGGCCT 1 cut(s) 1656
StyD4I CCNGG 5 cut(s) 1264, 1543, 1689, 2718, 3129
StyI CCWWGG 5 cut(s) 974, 1021, 1829, 1932, 2002
TaaI ACNGT 6 cut(s) 467, 640, 1283, 2130, 2210, 2927
TaiI ACGT 6 cut(s) 421, 823, 1069, 1974, 2025, 2644
TaqII GACCGA 2 cut(s) 297, 3024
TatI WGTACW 4 cut(s) 633, 1164, 2109, 2393
TauI GCSGC 2 cut(s) 265, 1390
TfiI GAWTC 7 cut(s) 70, 1032, 2064, 2675, 2726, 3031, 3087
Tru1I TTAA 8 cut(s) 15, 230, 1326, 1464, 1596, 1895, 2417, 2460
Tru9I TTAA 8 cut(s) 15, 230, 1326, 1464, 1596, 1895, 2417, 2460
TscAI CASTG 5 cut(s) 1288, 1338, 1915, 2964, 3123
TseFI GTSAC 3 cut(s) 119, 1277, 1906
TseI GCWGC 8 cut(s) 899, 1637, 1640, 1675, 2036, 2933, 2983, 3113
Tsp45I GTSAC 3 cut(s) 119, 1277, 1906
TspGWI ACGGA 2 cut(s) 767, 1255
TspRI CASTG 5 cut(s) 1288, 1338, 1915, 2964, 3123
Tth111I GACNNNGTC 2 cut(s) 125, 1266
Vha464I CTTAAG 1 cut(s) 1463
VpaK11BI GGWCC 2 cut(s) 2608, 2972
XapI RAATTY 6 cut(s) 89, 98, 318, 599, 874, 2200
XbaI TCTAGA 3 cut(s) 1259, 1666, 2212
XceI RCATGY 4 cut(s) 662, 1490, 1540, 3161
XcmI CCANNNNNNNNNTGG 1 cut(s) 972
XhoI CTCGAG 2 cut(s) 74, 1337
XmnI GAANNNNTTC 5 cut(s) 47, 1143, 1314, 2730, 3060
ZrmI AGTACT 1 cut(s) 2395
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.