Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001417.1

Orthogroup ID

OG0000767

Physical Location & Seq

Genomic Coordinates Forward (+)

56329 .. 59491

Gene Structure 3163 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001417.1_g000014.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1611 bp

atggaggcaaaaccaagcaaggaaaagccatcaaatccggtagacaaagtgacgatggatcatgtgcttttggcactcggagagaccaaggaacagagggagctcagaattcgtaatctgttcaacttgtttgacactgcaaatgctgggtatttggactatgccctgattgaggcaggcctctctgccctcaagataccccctgagtacaagtttgccaaggatctgttaaatgtgtgtgatgcaaatcgagatggtcgtgtggattaccaagattttaagcattacatggacgataaagagctcgaactctatgccatctttcaggcaatagatgtgaaacacaatggttgcatcctacctgaagagctatgggatgcacttgtgagagcagggattgaaattgatgatgaggaacttgctctctttgttgagcgtgttgacaaggataataatggtgttataacatttgaagaatggagagattttcttctgctttaccctcaggaggcaaccatcgagaatatttatcattatttggaaagggtatgccttgttgatattggggaacagactgttactccagaagtcatgagtaaacatatccatgcaagtagatatttgattgccggtgcagtagcaggagcaacatcgcgtacagctaccgctcctcttgatcgcttgaaggttgttttgcaagtacagacacaacaagctcgtattatgcctgcagtaagggatatatggagacaagggggcatgctgggcttttttcgtggcaatggtttaaatgtcttcaaggtggctcctgaaagtgccatcaggttctatacttatgaaatgctgaaaagttatattctccatgctaatggtgaagaagataaggctaatattgggatgacaattcgccttgtttccggtggtttagcaggtgctgtggcacaagctgctatttatcccatggatcttgttaaaacacgaatacaaacttatgctggcgaaggtggaaggactccaagtcttggatctctgtctaaagaaatatgggttcaggagggaccccgggcattttatagaggccttgttccatctctacttgggattatcccttatgctggcatcgatcttgctgcttatgataccttgaaagacatgtccaagaaatatattctgcatgacagcgaacctggtcctcttgtgcaattgggatgtgggacggtatcaggtgctctgagtgcttcatgtgtttacccattgcaggttgtcaggacaagaatgcaagcccagcgcttgaacaaagactctgcttatgagggaatggctgatgtgttcaggagaaccttgcaacgtgaagggtttaggggattatacaagggaatatttcccaatctccttaaacccatccacaaggcccaatcttctgatctggacacccaaaagctgggcacccgggtatggctgaccgccaccaaccgaggccacatctgcaccttcggcgtcatcaaagccgccgccataaaggacgtcatctgcagccgcttacgcccgactcaccaccgacctccccaaaccaccaatcagccttggcttatgagacttaaggcactctaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000295 GO:0003674 GO:0005215 GO:0005346 GO:0005347 GO:0005488 GO:0005509 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0006810 GO:0006811 GO:0006820 GO:0006839 GO:0006855 GO:0006862 GO:0006950 GO:0006979 GO:0008150 GO:0008509 GO:0008514 GO:0009987 GO:0010035 GO:0010038 GO:0010941 GO:0015075 GO:0015215 GO:0015216 GO:0015217 GO:0015238 GO:0015605 GO:0015711 GO:0015748 GO:0015865 GO:0015866 GO:0015867 GO:0015868 GO:0015893 GO:0015931 GO:0015932 GO:0016020 GO:0016021 GO:0019866 GO:0022857 GO:0031090 GO:0031224 GO:0031966 GO:0031967 GO:0031975 GO:0033554 GO:0034220 GO:0034599 GO:0042221 GO:0042493 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0046872 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051503 GO:0051592 GO:0051716 GO:0055085 GO:0065007 GO:0070887 GO:0071241 GO:0071248 GO:0071277 GO:0071702 GO:0071705 GO:0098656 GO:1901264 GO:1901505 GO:1901679

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

EF-hand_5 EF-hand_7 EF-hand_8 Mito_carr

Protein Analysis

536

Amino Acids

60.06

Weight (kDa)

7.62

Isoelectric Point (pI)

39.25

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000767)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G07320 AT5G51050 AT5G61810 AT5G61810
fragaria_vesca	FvH4_5g09810 FvH4_5g09810 FvH4_5g09810 FvH4_6g54390 FvH4_6g54390 FvH4_6g54390 FvH4_6g54390 FvH4_6g54390 FvH4_6g54390 FvH4_6g54390 FvH4_6g54390 FvH4_6g54390 FvH4_6g54390 FvH4_6g54390 FvH4_6g54390 FvH4_6g54390 FvH4_6g54390 FvH4_6g54390 FvH4_6g54390 FvH4_6g54390
malus_domestica	MD00G1075800.v1.1 MD14G1145100.v1.1 MD17G1005800.v1.1
prunus_persica	Prupe.3G314500_v2.0.a1 Prupe.3G314500_v2.0.a1 Prupe.3G314500_v2.0.a1 Prupe.3G314500_v2.0.a1 Prupe.3G314500_v2.0.a1 Prupe.5G139700_v2.0.a1 Prupe.5G139700_v2.0.a1 Prupe.5G139700_v2.0.a1
pyrus_communis	pycom06g11980 pycom111g00140 pycom17g00150
rosa_chinensis	RchiOBHm_Chr2g0176621 RchiOBHm_Chr7g0188421
rosa_laevigata	RLG00000004696 RLG00000022430
rosa_multiflora	Rmu_sc0000952.1_g000002 Rmu_sc0001417.1_g000014
rosa_roxburghii	Rroxscaffold_2G00076260 Rroxscaffold_3G00266430
rosa_rugosa	Rorug02G0596400 Rorug02G0596500 Rorug02G0596600 Rorug02G0596600 Rorug02G0596600 Rorug02G0596600 Rorug02G0596600 Rorug02G0596600 Rorug02G0596700 Rorug02G0596800 Rorug02G0596900 Rorug06G0490400 Rorug06G0490400
rosa_samantha	Rh2AG674500 Rh2BG685600 Rh2CG648900 Rh2DG699800 Rh7AG095100 Rh7BG096600 Rh7CG097300 Rh7DG096800
rosa_wichuraiana	Rw0G015640 Rw2G055350 Rw7G008200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	464
AarI	CACCTGC	1 cut(s)	920
AatII	GACGTC	1 cut(s)	1527
Acc36I	ACCTGC	2 cut(s)	920, 1249
AccB1I	GGYRCC	1 cut(s)	1445
AccB7I	CCANNNNNTGG	2 cut(s)	1022, 1441
AccBSI	CCGCTC	1 cut(s)	668
AccI	GTMKAC	1 cut(s)	42
AccII	CGCG	1 cut(s)	655
AciI	CCGC	5 cut(s)	666, 1464, 1509, 1512, 1537
AclWI	GGATC	4 cut(s)	66, 231, 972, 1033
AcsI	RAATTY	1 cut(s)	108
AcuI	CTGAAG	1 cut(s)	384
AcyI	GRCGYC	2 cut(s)	1497, 1524
AfaI	GTAC	3 cut(s)	209, 658, 702
AfeI	AGCGCT	1 cut(s)	1289
AfiI	CCNNNNNNNGG	7 cut(s)	172, 508, 1022, 1115, 1258, 1441, 1455
AflII	CTTAAG	1 cut(s)	1598
AflIII	ACRYGT	1 cut(s)	1152
AgsI	TTSAA	7 cut(s)	124, 401, 473, 685, 799, 1147, 1294
AhdI	GACNNNNNGTC	1 cut(s)	1017
AjnI	CCWGG	1 cut(s)	1186
AluBI	AGCT	7 cut(s)	103, 304, 370, 662, 716, 947, 1441
AluI	AGCT	7 cut(s)	103, 304, 370, 662, 716, 947, 1441
Alw21I	GWGCWC	3 cut(s)	105, 306, 1231
Alw26I	GTCTC	3 cut(s)	77, 742, 1588
AlwI	GGATC	4 cut(s)	66, 231, 972, 1033
AlwNI	CAGNNNCTG	1 cut(s)	935
Ama87I	CYCGRG	2 cut(s)	1062, 1449
Aor51HI	AGCGCT	1 cut(s)	1289
AoxI	GGCC	4 cut(s)	178, 1078, 1410, 1477
ApeKI	GCWGC	3 cut(s)	947, 1130, 1533
ApoI	RAATTY	1 cut(s)	108
AspLEI	GCGC	1 cut(s)	1290
AspS9I	GGNCC	3 cut(s)	1058, 1190, 1411
AsuC2I	CCSGG	4 cut(s)	1063, 1064, 1450, 1451
AsuHPI	GGTGA	2 cut(s)	884, 1544
AvaI	CYCGRG	2 cut(s)	1062, 1449
AvaII	GGWCC	2 cut(s)	1058, 1190
AxyI	CCTNAGG	1 cut(s)	504
BaeGI	GKGCMC	1 cut(s)	1448
BanI	GGYRCC	1 cut(s)	1445
BanII	GRGCYC	2 cut(s)	105, 306
BbsI	GAAGAC	1 cut(s)	787
Bbv12I	GWGCWC	3 cut(s)	105, 306, 1231
BbvI	GCAGC	3 cut(s)	934, 1117, 1545
BccI	CCATC	8 cut(s)	37, 49, 248, 326, 524, 827, 1096, 1409
BcgI	CGANNNNNNTGC	4 cut(s)	296, 330, 1112, 1146
BciT130I	CCWGG	1 cut(s)	1188
BcnI	CCSGG	4 cut(s)	1063, 1064, 1450, 1451
BcoDI	GTCTC	3 cut(s)	77, 742, 1588
BfmI	CTRYAG	2 cut(s)	729, 1531
BfoI	RGCGCY	1 cut(s)	1291
BfrI	CTTAAG	1 cut(s)	1598
BfuAI	ACCTGC	2 cut(s)	920, 1249
BisI	GCNGC	6 cut(s)	948, 1131, 1509, 1512, 1534, 1537
BlsI	GCNGC	6 cut(s)	949, 1132, 1510, 1513, 1535, 1538
Bme1390I	CCNGG	5 cut(s)	1063, 1064, 1188, 1450, 1451
Bme18I	GGWCC	2 cut(s)	1058, 1190
BmeRI	GACNNNNNGTC	1 cut(s)	1017
BmeT110I	CYCGRG	2 cut(s)	1062, 1449
BmgT120I	GGNCC	3 cut(s)	1058, 1190, 1411
BmiI	GGNNCC	4 cut(s)	807, 1059, 1060, 1447
BmrFI	CCNGG	5 cut(s)	1063, 1064, 1188, 1450, 1451
BmsI	GCATC	4 cut(s)	232, 363, 367, 1128
BpiI	GAAGAC	1 cut(s)	787
BpmI	CTGGAG	1 cut(s)	567
BpuEI	CTTGAG	1 cut(s)	176
BpuMI	CCSGG	4 cut(s)	1063, 1064, 1450, 1451
Bsa29I	ATCGAT	1 cut(s)	1122
BsaBI	GATNNNNATC	1 cut(s)	246
BsaHI	GRCGYC	2 cut(s)	1497, 1524
BsaI	GGTCTC	1 cut(s)	77
BsaJI	CCNNGG	8 cut(s)	87, 219, 960, 1061, 1062, 1449, 1474, 1583
BsaWI	WCCGGW	2 cut(s)	37, 917
BsaXI	ACNNNNNCTCC	2 cut(s)	565, 595
Bsc4I	CCNNNNNNNGG	7 cut(s)	172, 508, 1022, 1115, 1258, 1441, 1455
Bse118I	RCCGGY	1 cut(s)	629
Bse21I	CCTNAGG	1 cut(s)	504
Bse3DI	GCAATG	2 cut(s)	787, 1253
Bse8I	GATNNNNATC	1 cut(s)	246
BseBI	CCWGG	1 cut(s)	1188
BseCI	ATCGAT	1 cut(s)	1122
BseDI	CCNNGG	8 cut(s)	87, 219, 960, 1061, 1062, 1449, 1474, 1583
BseGI	GGATG	5 cut(s)	354, 382, 903, 1214, 1401
BseJI	GATNNNNATC	1 cut(s)	246
BseLI	CCNNNNNNNGG	7 cut(s)	172, 508, 1022, 1115, 1258, 1441, 1455
BseMI	GCAATG	2 cut(s)	787, 1253
BseMII	CTCAG	4 cut(s)	118, 195, 518, 1223
BseRI	GAGGAG	1 cut(s)	660
BseSI	GKGCMC	1 cut(s)	1448
BseXI	GCAGC	3 cut(s)	934, 1117, 1545
BseYI	CCCAGC	4 cut(s)	146, 763, 1284, 1441
BsgI	GTGCAG	2 cut(s)	654, 1471
Bsh1236I	CGCG	1 cut(s)	655
BshFI	GGCC	4 cut(s)	180, 1080, 1412, 1479
BshNI	GGYRCC	1 cut(s)	1445
BshVI	ATCGAT	1 cut(s)	1122
BsiHKAI	GWGCWC	3 cut(s)	105, 306, 1231
BsiHKCI	CYCGRG	2 cut(s)	1062, 1449
BsiSI	CCGG	5 cut(s)	38, 630, 918, 1063, 1450
BslFI	GGGAC	2 cut(s)	1071, 1228
BslI	CCNNNNNNNGG	7 cut(s)	172, 508, 1022, 1115, 1258, 1441, 1455
BsmAI	GTCTC	3 cut(s)	77, 742, 1588
BsmFI	GGGAC	2 cut(s)	1071, 1228
BsmI	GAATGC	1 cut(s)	1281
BsnI	GGCC	4 cut(s)	180, 1080, 1412, 1479
Bso31I	GGTCTC	1 cut(s)	77
BsoBI	CYCGRG	2 cut(s)	1062, 1449
Bsp1286I	GDGCHC	4 cut(s)	105, 306, 1231, 1448
Bsp143I	GATC	7 cut(s)	58, 223, 676, 964, 1025, 1123, 1423
Bsp19I	CCATGG	1 cut(s)	960
BspACI	CCGC	5 cut(s)	666, 1464, 1509, 1512, 1537
BspANI	GGCC	4 cut(s)	180, 1080, 1412, 1479
BspCNI	CTCAG	4 cut(s)	117, 196, 517, 1224
BspDI	ATCGAT	1 cut(s)	1122
BspFNI	CGCG	1 cut(s)	655
BspHI	TCATGA	1 cut(s)	591
BspLI	GGNNCC	4 cut(s)	807, 1059, 1060, 1447
BspMAI	CTGCAG	2 cut(s)	733, 1535
BspMI	ACCTGC	2 cut(s)	920, 1249
BspPI	GGATC	4 cut(s)	66, 231, 972, 1033
BspQI	GCTCTTC	1 cut(s)	360
BspT107I	GGYRCC	1 cut(s)	1445
BspTI	CTTAAG	1 cut(s)	1598
BspTNI	GGTCTC	1 cut(s)	77
BsrBI	CCGCTC	1 cut(s)	668
BsrDI	GCAATG	2 cut(s)	787, 1253
BsrFI	RCCGGY	1 cut(s)	629
BssAI	RCCGGY	1 cut(s)	629
BssECI	CCNNGG	8 cut(s)	87, 219, 960, 1061, 1062, 1449, 1474, 1583
BssMI	GATC	7 cut(s)	58, 223, 676, 964, 1025, 1123, 1423
BssNI	GRCGYC	2 cut(s)	1497, 1524
BssT1I	CCWWGG	4 cut(s)	87, 219, 960, 1583
Bst2UI	CCWGG	1 cut(s)	1188
Bst4CI	ACNGT	2 cut(s)	577, 1219
Bst6I	CTCTTC	1 cut(s)	360
BstACI	GRCGYC	2 cut(s)	1497, 1524
BstAFI	CTTAAG	1 cut(s)	1598
BstAPI	GCANNNNNTGC	1 cut(s)	947
BstC8I	GCNNGC	6 cut(s)	178, 729, 761, 997, 1117, 1281
BstDEI	CTNAG	4 cut(s)	104, 204, 504, 1232
BstDSI	CCRYGG	1 cut(s)	960
BstENI	CCTNNNNNAGG	1 cut(s)	170
BstF5I	GGATG	5 cut(s)	354, 382, 903, 1214, 1401
BstFNI	CGCG	1 cut(s)	655
BstH2I	RGCGCY	1 cut(s)	1291
BstHHI	GCGC	1 cut(s)	1290
BstKTI	GATC	7 cut(s)	61, 226, 679, 967, 1028, 1126, 1426
BstMAI	GTCTC	3 cut(s)	77, 742, 1588
BstMBI	GATC	7 cut(s)	58, 223, 676, 964, 1025, 1123, 1423
BstMWI	GCNNNNNNNGC	7 cut(s)	765, 947, 1235, 1285, 1485, 1494, 1542
BstNI	CCWGG	1 cut(s)	1188
BstNSI	RCATGY	2 cut(s)	763, 1156
BstSCI	CCNGG	5 cut(s)	1061, 1062, 1186, 1448, 1449
BstSFI	CTRYAG	2 cut(s)	729, 1531
BstSLI	GKGCMC	1 cut(s)	1448
BstUI	CGCG	1 cut(s)	655
BstV1I	GCAGC	3 cut(s)	934, 1117, 1545
BstV2I	GAAGAC	1 cut(s)	787
BstX2I	RGATCY	3 cut(s)	223, 964, 1025
BstXI	CCANNNNNNTGG	1 cut(s)	869
BstYI	RGATCY	3 cut(s)	223, 964, 1025
Bsu15I	ATCGAT	1 cut(s)	1122
Bsu36I	CCTNAGG	1 cut(s)	504
BsuRI	GGCC	4 cut(s)	180, 1080, 1412, 1479
BsuTUI	ATCGAT	1 cut(s)	1122
BtgI	CCRYGG	1 cut(s)	960
BtgZI	GCGATG	1 cut(s)	636
BtsCI	GGATG	5 cut(s)	354, 382, 903, 1214, 1401
BtsI	GCAGTG	1 cut(s)	135
BtsIMutI	CAGTG	1 cut(s)	135
BveI	ACCTGC	2 cut(s)	920, 1249
Cac8I	GCNNGC	6 cut(s)	178, 729, 761, 997, 1117, 1281
CaiI	CAGNNNCTG	1 cut(s)	935
CciI	TCATGA	1 cut(s)	591
CfoI	GCGC	1 cut(s)	1290
Cfr10I	RCCGGY	1 cut(s)	629
Cfr13I	GGNCC	3 cut(s)	1058, 1190, 1411
Cfr9I	CCCGGG	2 cut(s)	1062, 1449
ClaI	ATCGAT	1 cut(s)	1122
CseI	GACGC	1 cut(s)	1486
CsiI	ACCWGGT	1 cut(s)	1186
Csp6I	GTAC	3 cut(s)	208, 657, 701
CviQI	GTAC	3 cut(s)	208, 657, 701
DdeI	CTNAG	4 cut(s)	104, 204, 504, 1232
DpnI	GATC	7 cut(s)	60, 225, 678, 966, 1027, 1125, 1425
DpnII	GATC	7 cut(s)	58, 223, 676, 964, 1025, 1123, 1423
DraI	TTTAAA	1 cut(s)	789
DriI	GACNNNNNGTC	1 cut(s)	1017
Eam1104I	CTCTTC	1 cut(s)	360
Eam1105I	GACNNNNNGTC	1 cut(s)	1017
EarI	CTCTTC	1 cut(s)	360
Ecl136II	GAGCTC	2 cut(s)	103, 304
Eco130I	CCWWGG	4 cut(s)	87, 219, 960, 1583
Eco147I	AGGCCT	2 cut(s)	180, 1080
Eco24I	GRGCYC	2 cut(s)	105, 306
Eco31I	GGTCTC	1 cut(s)	77
Eco47I	GGWCC	2 cut(s)	1058, 1190
Eco47III	AGCGCT	1 cut(s)	1289
Eco53kI	GAGCTC	2 cut(s)	103, 304
Eco57I	CTGAAG	1 cut(s)	384
Eco81I	CCTNAGG	1 cut(s)	504
Eco88I	CYCGRG	2 cut(s)	1062, 1449
EcoICRI	GAGCTC	2 cut(s)	103, 304
EcoNI	CCTNNNNNAGG	1 cut(s)	170
EcoO109I	RGGNCCY	1 cut(s)	1058
EcoRI	GAATTC	1 cut(s)	108
EcoRII	CCWGG	1 cut(s)	1186
EcoT14I	CCWWGG	4 cut(s)	87, 219, 960, 1583
EcoT38I	GRGCYC	2 cut(s)	105, 306
ErhI	CCWWGG	4 cut(s)	87, 219, 960, 1583
FaqI	GGGAC	2 cut(s)	1071, 1228
FblI	GTMKAC	1 cut(s)	42
Fnu4HI	GCNGC	6 cut(s)	948, 1131, 1509, 1512, 1534, 1537
FokI	GGATG	5 cut(s)	341, 389, 910, 1221, 1388
FriOI	GRGCYC	2 cut(s)	105, 306
Fsp4HI	GCNGC	6 cut(s)	948, 1131, 1509, 1512, 1534, 1537
GlaI	GCGC	1 cut(s)	1289
GluI	GCNGC	6 cut(s)	948, 1131, 1509, 1512, 1534, 1537
GsaI	CCCAGC	4 cut(s)	150, 767, 1288, 1445
GsuI	CTGGAG	1 cut(s)	567
HaeII	RGCGCY	1 cut(s)	1291
HaeIII	GGCC	4 cut(s)	180, 1080, 1412, 1479
HapII	CCGG	5 cut(s)	38, 630, 918, 1063, 1450
HgaI	GACGC	1 cut(s)	1486
HhaI	GCGC	1 cut(s)	1290
Hin1I	GRCGYC	2 cut(s)	1497, 1524
Hin6I	GCGC	1 cut(s)	1288
HinP1I	GCGC	1 cut(s)	1288
HincII	GTYRAC	1 cut(s)	442
HindII	GTYRAC	1 cut(s)	442
HinfI	GANTC	3 cut(s)	1012, 1301, 1549
HpaII	CCGG	5 cut(s)	38, 630, 918, 1063, 1450
HphI	GGTGA	2 cut(s)	884, 1544
Hpy166II	GTNNAC	4 cut(s)	43, 442, 599, 1249
Hpy188I	TCNGA	4 cut(s)	80, 107, 1233, 1423
Hpy8I	GTNNAC	4 cut(s)	43, 442, 599, 1249
HpyAV	CCTTC	5 cut(s)	679, 995, 1002, 1346, 1501
HpyCH4III	ACNGT	2 cut(s)	577, 1219
HpyCH4IV	ACGT	2 cut(s)	1348, 1524
HpyF10VI	GCNNNNNNNGC	7 cut(s)	765, 947, 1235, 1285, 1485, 1494, 1542
HpyF3I	CTNAG	4 cut(s)	104, 204, 504, 1232
HpySE526I	ACGT	2 cut(s)	1348, 1524
Hsp92I	GRCGYC	2 cut(s)	1497, 1524
HspAI	GCGC	1 cut(s)	1288
KflI	GGGWCCC	1 cut(s)	1058
Kzo9I	GATC	7 cut(s)	58, 223, 676, 964, 1025, 1123, 1423
LguI	GCTCTTC	1 cut(s)	360
LmnI	GCTCC	4 cut(s)	100, 644, 673, 811
Lsp1109I	GCAGC	3 cut(s)	934, 1117, 1545
LweI	GCATC	4 cut(s)	232, 363, 367, 1128
MabI	ACCWGGT	1 cut(s)	1186
MaeII	ACGT	2 cut(s)	1348, 1524
MaeIII	GTNAC	2 cut(s)	49, 577
MalI	GATC	7 cut(s)	60, 225, 678, 966, 1027, 1125, 1425
MbiI	CCGCTC	1 cut(s)	668
MboI	GATC	7 cut(s)	58, 223, 676, 964, 1025, 1123, 1423
MboII	GAAGA	7 cut(s)	377, 482, 485, 787, 887, 890, 1410
MfeI	CAATTG	1 cut(s)	1202
MflI	RGATCY	3 cut(s)	223, 964, 1025
MhlI	GDGCHC	4 cut(s)	105, 306, 1231, 1448
MluCI	AATT	4 cut(s)	108, 402, 903, 1202
MlyI	GAGTC	3 cut(s)	1006, 1295, 1543
MseI	TTAA	6 cut(s)	230, 279, 788, 972, 1395, 1599
MslI	CAYNNNNRTG	2 cut(s)	606, 867
MspCI	CTTAAG	1 cut(s)	1598
MspI	CCGG	5 cut(s)	38, 630, 918, 1063, 1450
MspR9I	CCNGG	5 cut(s)	1063, 1064, 1188, 1450, 1451
MunI	CAATTG	1 cut(s)	1202
Mva1269I	GAATGC	1 cut(s)	1281
MvaI	CCWGG	1 cut(s)	1188
MvnI	CGCG	1 cut(s)	655
MwoI	GCNNNNNNNGC	7 cut(s)	765, 947, 1235, 1285, 1485, 1494, 1542
NciI	CCSGG	4 cut(s)	1063, 1064, 1450, 1451
NcoI	CCATGG	1 cut(s)	960
NdeII	GATC	7 cut(s)	58, 223, 676, 964, 1025, 1123, 1423
NlaIV	GGNNCC	4 cut(s)	807, 1059, 1060, 1447
NmuCI	GTSAC	1 cut(s)	49
NspI	RCATGY	2 cut(s)	763, 1156
PaeI	GCATGC	1 cut(s)	763
PagI	TCATGA	1 cut(s)	591
PaqCI	CACCTGC	1 cut(s)	920
PceI	AGGCCT	2 cut(s)	180, 1080
PciI	ACATGT	1 cut(s)	1152
PciSI	GCTCTTC	1 cut(s)	360
PcsI	WCGNNNNNNNCGW	1 cut(s)	256
PctI	GAATGC	1 cut(s)	1281
PflMI	CCANNNNNTGG	2 cut(s)	1022, 1441
PkrI	GCNGC	6 cut(s)	949, 1132, 1510, 1513, 1535, 1538
PleI	GAGTC	3 cut(s)	1006, 1295, 1543
PpsI	GAGTC	3 cut(s)	1006, 1295, 1543
PpuMI	RGGWCCY	1 cut(s)	1058
PscI	ACATGT	1 cut(s)	1152
PsiI	TTATAA	1 cut(s)	464
Psp124BI	GAGCTC	2 cut(s)	105, 306
Psp5II	RGGWCCY	1 cut(s)	1058
Psp6I	CCWGG	1 cut(s)	1186
PspFI	CCCAGC	4 cut(s)	146, 763, 1284, 1441
PspGI	CCWGG	1 cut(s)	1186
PspN4I	GGNNCC	4 cut(s)	807, 1059, 1060, 1447
PspPI	GGNCC	3 cut(s)	1058, 1190, 1411
PspPPI	RGGWCCY	1 cut(s)	1058
PstI	CTGCAG	2 cut(s)	733, 1535
PstNI	CAGNNNCTG	1 cut(s)	935
PsuI	RGATCY	3 cut(s)	223, 964, 1025
RsaI	GTAC	3 cut(s)	209, 658, 702
RsaNI	GTAC	3 cut(s)	208, 657, 701
RseI	CAYNNNNRTG	2 cut(s)	606, 867
SacI	GAGCTC	2 cut(s)	105, 306
SapI	GCTCTTC	1 cut(s)	360
SaqAI	TTAA	6 cut(s)	230, 279, 788, 972, 1395, 1599
SatI	GCNGC	6 cut(s)	948, 1131, 1509, 1512, 1534, 1537
Sau3AI	GATC	7 cut(s)	58, 223, 676, 964, 1025, 1123, 1423
Sau96I	GGNCC	3 cut(s)	1058, 1190, 1411
SchI	GAGTC	3 cut(s)	1006, 1295, 1543
ScrFI	CCNGG	5 cut(s)	1063, 1064, 1188, 1450, 1451
SduI	GDGCHC	4 cut(s)	105, 306, 1231, 1448
SexAI	ACCWGGT	1 cut(s)	1186
SfaNI	GCATC	4 cut(s)	232, 363, 367, 1128
SfcI	CTRYAG	2 cut(s)	729, 1531
SinI	GGWCC	2 cut(s)	1058, 1190
SmaI	CCCGGG	2 cut(s)	1064, 1451
SmiMI	CAYNNNNRTG	2 cut(s)	606, 867
SmlI	CTYRAG	2 cut(s)	191, 1598
SmoI	CTYRAG	2 cut(s)	191, 1598
SphI	GCATGC	1 cut(s)	763
Sse9I	AATT	4 cut(s)	108, 402, 903, 1202
SseBI	AGGCCT	2 cut(s)	180, 1080
SsiI	CCGC	5 cut(s)	666, 1464, 1509, 1512, 1537
SspI	AATATT	3 cut(s)	526, 892, 1380
SstI	GAGCTC	2 cut(s)	105, 306
StuI	AGGCCT	2 cut(s)	180, 1080
StyD4I	CCNGG	5 cut(s)	1061, 1062, 1186, 1448, 1449
StyI	CCWWGG	4 cut(s)	87, 219, 960, 1583
TaaI	ACNGT	2 cut(s)	577, 1219
TaiI	ACGT	2 cut(s)	1351, 1527
TaqI	TCGA	4 cut(s)	250, 306, 519, 1122
TasI	AATT	4 cut(s)	108, 402, 903, 1202
TatI	WGTACW	2 cut(s)	207, 700
TauI	GCSGC	3 cut(s)	1511, 1514, 1539
Tru1I	TTAA	6 cut(s)	230, 279, 788, 972, 1395, 1599
Tru9I	TTAA	6 cut(s)	230, 279, 788, 972, 1395, 1599
TscAI	CASTG	1 cut(s)	142
TseFI	GTSAC	1 cut(s)	49
TseI	GCWGC	3 cut(s)	947, 1130, 1533
Tsp45I	GTSAC	1 cut(s)	49
TspDTI	ATGAA	2 cut(s)	852, 1230
TspMI	CCCGGG	2 cut(s)	1062, 1449
TspRI	CASTG	1 cut(s)	142
Van91I	CCANNNNNTGG	2 cut(s)	1022, 1441
Vha464I	CTTAAG	1 cut(s)	1598
VpaK11BI	GGWCC	2 cut(s)	1058, 1190
XagI	CCTNNNNNAGG	1 cut(s)	170
XapI	RAATTY	1 cut(s)	108
XceI	RCATGY	2 cut(s)	763, 1156
XmaI	CCCGGG	2 cut(s)	1062, 1449
XmiI	GTMKAC	1 cut(s)	42
ZraI	GACGTC	1 cut(s)	1525

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.