Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0000767

Physical Location & Seq

Genomic Coordinates Forward (+)

61501132 .. 61503538

Gene Structure 2407 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000004696

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1527 bp

ATGTCAGGGGCAAAGCCGGCCGCGGACCATGTCGGCTTTCCCATGATGGCAGACACCAACCCCGGCGCCGCCGCCGACGGCTGCTGCAACCCCGTCAAGAAGTCCGGGCCCATCACCATGGATCACGTTCTTCTAGCTCTGCGCGAGACCAAGGAGGAGAGGGAGCTCAGGATTCGGAGCCTCTTCAATTTCTTCGACTCTGCCAATCTGGGTTACTTGGACTATGCTCAGATCGAGGCCGGGCTCTCGGCGCTTCAGATTCCGCCCGAGTATAAGTACGCAAAGGATTTGCTCAAGGTTTGTGATGCTGATAGGGATGGAAGGGTCAATTACCACGAGTTTCGACAGTATATGGATGACAAGGAGCTGGAGCTGTACCGCATTTTCCAGGCCATTGATGTGGAGCACAATGGCTGCATTCTGCCGGAGGAGCTCTGGGAGGCGCTCGTCAAGGCTGGGATTGAAATGGATGATGAGGAACTTGCTCATTTTGTGGAGCATGTTGACAAGGATAACAATGGAATTATAACTTTTGAGGAATGGAGAGATTTTCTGCTGCTTTATCCGCATGAAGCAACTATTGAGAACATATATCATCACTGGGAAAGGGTATGCCTTGTGGACATTGGAGAACAGGCTGTTATTCCAGAAGGCATCAGTAAGCATGTTCATAGGAGTAGATACTTTATTGCAGGGGCTATAGCAGGAGCTGCTTCTCGTACTGCTACTGCTCCTCTTGATCGGTTGAAGGTGGTTTTGCAAGTTCAGACATCACGTGCATCTGTTGTGCCTGCGATAAGGAAGATATTTAAGGAAGATGGTTTTTTGGGGTTTTTCCGAGGTAATGGAATAAATGTAGTGAAGGTGGCACCTGAAAGCGCCATCAAGTTCTATACATATGAATTGTTAAAAAATATTATTGGAGAAACTATGGGGGAGAACAAGGATGATATTGGTACTGCCGGTAGACTTTTGGCTGGTGGTATGGCAGGTGCCGTGGCACAAACTGCTATATACCCACTGGATCTTGTGAAGACTCGGTTACAGACTTGTGCTTCAGAAGCTGGAAAGGGTCCTAAATTGGGGATACTGACCAAGGAAATTTTGACTCATGAGGGACCACGGGCCTTCTATAAAGGACTACTACCATCTCTTCTTGGGATTGTCCCCTATGCTGGCATTGACCTGGCTGCCTATGAGACCTTAAAAGATATGTCAAAGACATATTTTCTTCATGATAATAGTGATCCTGGCCCTCTCATCCAATTGGGATGTGGGACAGTCTCTGGAGCTCTTGGAGCAACATGTGTTTATCCCTTGCAGGTTATTCGTACCAGAATGCAAGCTCAACGTTCTAACTCAGCAGAAGCTTATAGAGGAATGTCTGATGTATTCTGGAGAACGCTTCAGCGTGAAGGATATAGAGGTTTCTACAAGGGGTTGTTTCCAAATCTTCTCAAGGTTGTGCCAGCAGCAAGCATTACATATATGGTATATGAAGCCATGAAGAAGAGACTAGATCTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000295 GO:0003674 GO:0005215 GO:0005346 GO:0005347 GO:0005488 GO:0005509 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0006810 GO:0006811 GO:0006820 GO:0006839 GO:0006855 GO:0006862 GO:0006950 GO:0006979 GO:0008150 GO:0008509 GO:0008514 GO:0009987 GO:0010035 GO:0010038 GO:0010941 GO:0015075 GO:0015215 GO:0015216 GO:0015217 GO:0015238 GO:0015605 GO:0015711 GO:0015748 GO:0015865 GO:0015866 GO:0015867 GO:0015868 GO:0015893 GO:0015931 GO:0015932 GO:0016020 GO:0016021 GO:0019866 GO:0022857 GO:0031090 GO:0031224 GO:0031966 GO:0031967 GO:0031975 GO:0033554 GO:0034220 GO:0034599 GO:0042221 GO:0042493 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0046872 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051503 GO:0051592 GO:0051716 GO:0055085 GO:0065007 GO:0070887 GO:0071241 GO:0071248 GO:0071277 GO:0071702 GO:0071705 GO:0098656 GO:1901264 GO:1901505 GO:1901679

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

EF-hand_5 EF-hand_7 EF-hand_8 Mito_carr

Protein Analysis

509

Amino Acids

56.48

Weight (kDa)

5.87

Isoelectric Point (pI)

32.28

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
EF-hand_7	PF13499	57 - 118	6.9e-07	EF-hand domain pair
EF-hand_7	PF13499	124 - 180	2.3e-10	EF-hand domain pair
Mito_carr	PF00153	226 - 308	1.8e-24	Mitochondrial carrier protein
Mito_carr	PF00153	320 - 407	2.4e-24	Mitochondrial carrier protein
Mito_carr	PF00153	419 - 506	3.1e-25	Mitochondrial carrier protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0000767)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G07320 AT5G51050 AT5G61810 AT5G61810
fragaria_vesca	FvH4_5g09810 FvH4_5g09810 FvH4_5g09810 FvH4_6g54390 FvH4_6g54390 FvH4_6g54390 FvH4_6g54390 FvH4_6g54390 FvH4_6g54390 FvH4_6g54390 FvH4_6g54390 FvH4_6g54390 FvH4_6g54390 FvH4_6g54390 FvH4_6g54390 FvH4_6g54390 FvH4_6g54390 FvH4_6g54390 FvH4_6g54390 FvH4_6g54390
malus_domestica	MD00G1075800.v1.1 MD14G1145100.v1.1 MD17G1005800.v1.1
prunus_persica	Prupe.3G314500_v2.0.a1 Prupe.3G314500_v2.0.a1 Prupe.3G314500_v2.0.a1 Prupe.3G314500_v2.0.a1 Prupe.3G314500_v2.0.a1 Prupe.5G139700_v2.0.a1 Prupe.5G139700_v2.0.a1 Prupe.5G139700_v2.0.a1
pyrus_communis	pycom06g11980 pycom111g00140 pycom17g00150
rosa_chinensis	RchiOBHm_Chr2g0176621 RchiOBHm_Chr7g0188421
rosa_laevigata	RLG00000004696 RLG00000022430
rosa_multiflora	Rmu_sc0000952.1_g000002 Rmu_sc0001417.1_g000014
rosa_roxburghii	Rroxscaffold_2G00076260 Rroxscaffold_3G00266430
rosa_rugosa	Rorug02G0596400 Rorug02G0596500 Rorug02G0596600 Rorug02G0596600 Rorug02G0596600 Rorug02G0596600 Rorug02G0596600 Rorug02G0596600 Rorug02G0596700 Rorug02G0596800 Rorug02G0596900 Rorug06G0490400 Rorug06G0490400
rosa_samantha	Rh2AG674500 Rh2BG685600 Rh2CG648900 Rh2DG699800 Rh7AG095100 Rh7BG096600 Rh7CG097300 Rh7DG096800
rosa_wichuraiana	Rw0G015640 Rw2G055350 Rw7G008200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	527
AarI	CACCTGC	1 cut(s)	980
Acc36I	ACCTGC	2 cut(s)	980, 1312
AccB1I	GGYRCC	3 cut(s)	65, 868, 992
AccI	GTMKAC	1 cut(s)	967
AccII	CGCG	2 cut(s)	23, 144
AciI	CCGC	7 cut(s)	21, 23, 69, 72, 263, 379, 566
AclI	AACGTT	1 cut(s)	1351
AclWI	GGATC	3 cut(s)	129, 1032, 1241
AcoI	YGGCCR	1 cut(s)	18
AcsI	RAATTY	1 cut(s)	1101
AcuI	CTGAAG	3 cut(s)	239, 1041, 1391
AcvI	CACGTG	1 cut(s)	776
AcyI	GRCGYC	1 cut(s)	66
AfaI	GTAC	5 cut(s)	278, 377, 721, 958, 1333
AfiI	CCNNNNNNNGG	2 cut(s)	1082, 1175
AflIII	ACRYGT	1 cut(s)	1304
AgsI	TTSAA	3 cut(s)	187, 464, 748
AjnI	CCWGG	3 cut(s)	387, 1185, 1249
Alw21I	GWGCWC	4 cut(s)	168, 408, 435, 1294
Alw26I	GTCTC	4 cut(s)	140, 1193, 1288, 1507
AlwI	GGATC	3 cut(s)	129, 1032, 1241
AlwNI	CAGNNNCTG	3 cut(s)	710, 1064, 1286
Ama87I	CYCGRG	1 cut(s)	266
AoxI	GGCC	6 cut(s)	18, 107, 237, 390, 1125, 1252
ApaI	GGGCCC	1 cut(s)	111
ApeKI	GCWGC	7 cut(s)	81, 84, 414, 556, 710, 1190, 1472
ApoI	RAATTY	1 cut(s)	1101
AspLEI	GCGC	5 cut(s)	68, 144, 253, 445, 881
AspS9I	GGNCC	7 cut(s)	25, 107, 108, 1073, 1118, 1125, 1253
AsuC2I	CCSGG	3 cut(s)	63, 106, 241
AsuHPI	GGTGA	1 cut(s)	106
AvaI	CYCGRG	1 cut(s)	266
AvaII	GGWCC	3 cut(s)	25, 1073, 1118
BaeGI	GKGCMC	1 cut(s)	111
BanI	GGYRCC	3 cut(s)	65, 868, 992
BanII	GRGCYC	5 cut(s)	111, 168, 246, 435, 1294
BauI	CACGAG	1 cut(s)	335
BbrPI	CACGTG	1 cut(s)	776
BbsI	GAAGAC	1 cut(s)	1040
Bbv12I	GWGCWC	4 cut(s)	168, 408, 435, 1294
BbvI	GCAGC	7 cut(s)	68, 71, 401, 543, 697, 1177, 1484
BccI	CCATC	6 cut(s)	40, 119, 311, 812, 890, 1156
BceAI	ACGGC	2 cut(s)	94, 980
BcgI	CGANNNNNNTGC	2 cut(s)	1310, 1344
BciT130I	CCWGG	3 cut(s)	389, 1187, 1251
BciVI	GTATCC	1 cut(s)	1080
BcnI	CCSGG	3 cut(s)	63, 106, 241
BcoDI	GTCTC	4 cut(s)	140, 1193, 1288, 1507
BfaI	CTAG	2 cut(s)	134, 1517
BfmI	CTRYAG	2 cut(s)	699, 1523
BfoI	RGCGCY	4 cut(s)	69, 254, 446, 882
BfuAI	ACCTGC	2 cut(s)	980, 1312
BfuI	GTATCC	1 cut(s)	1080
BglII	AGATCT	1 cut(s)	1519
Bme1390I	CCNGG	6 cut(s)	63, 106, 241, 389, 1187, 1251
Bme18I	GGWCC	3 cut(s)	25, 1073, 1118
BmeT110I	CYCGRG	1 cut(s)	266
BmgT120I	GGNCC	7 cut(s)	25, 107, 108, 1073, 1118, 1125, 1253
BmiI	GGNNCC	7 cut(s)	67, 109, 179, 870, 994, 1074, 1119
BmrFI	CCNGG	6 cut(s)	63, 106, 241, 389, 1187, 1251
BmrI	ACTGGG	1 cut(s)	610
BmsI	GCATC	3 cut(s)	295, 663, 788
BmuI	ACTGGG	1 cut(s)	610
BpiI	GAAGAC	1 cut(s)	1040
BpmI	CTGGAG	3 cut(s)	389, 1308, 1417
Bpu10I	CCTNAGC	1 cut(s)	167
BpuEI	CTTGAG	2 cut(s)	278, 1442
BpuMI	CCSGG	3 cut(s)	63, 106, 241
BsaAI	YACGTR	1 cut(s)	776
BsaHI	GRCGYC	1 cut(s)	66
BsaI	GGTCTC	2 cut(s)	140, 1193
BsaJI	CCNNGG	8 cut(s)	21, 61, 117, 150, 838, 996, 1095, 1121
Bsc4I	CCNNNNNNNGG	2 cut(s)	1082, 1175
Bse118I	RCCGGY	2 cut(s)	16, 962
Bse1I	ACTGG	2 cut(s)	605, 1026
BseBI	CCWGG	3 cut(s)	389, 1187, 1251
BseDI	CCNNGG	8 cut(s)	21, 61, 117, 150, 838, 996, 1095, 1121
BseGI	GGATG	6 cut(s)	322, 361, 475, 952, 1260, 1277
BseLI	CCNNNNNNNGG	2 cut(s)	1082, 1175
BseMII	CTCAG	3 cut(s)	181, 242, 1374
BseNI	ACTGG	2 cut(s)	605, 1026
BseRI	GAGGAG	3 cut(s)	170, 443, 723
BseSI	GKGCMC	1 cut(s)	111
BseX3I	CGGCCG	1 cut(s)	18
BseXI	GCAGC	7 cut(s)	68, 71, 401, 543, 697, 1177, 1484
BseYI	CCCAGC	1 cut(s)	455
Bsh1236I	CGCG	2 cut(s)	23, 144
Bsh1285I	CGRYCG	1 cut(s)	21
BshFI	GGCC	6 cut(s)	20, 109, 239, 392, 1127, 1254
BshNI	GGYRCC	3 cut(s)	65, 868, 992
BsiEI	CGRYCG	1 cut(s)	21
BsiHKAI	GWGCWC	4 cut(s)	168, 408, 435, 1294
BsiHKCI	CYCGRG	1 cut(s)	266
BsiSI	CCGG	6 cut(s)	17, 63, 105, 240, 425, 963
BslFI	GGGAC	3 cut(s)	1131, 1151, 1291
BslI	CCNNNNNNNGG	2 cut(s)	1082, 1175
BsmAI	GTCTC	4 cut(s)	140, 1193, 1288, 1507
BsmFI	GGGAC	3 cut(s)	1131, 1151, 1291
BsmI	GAATGC	2 cut(s)	417, 1344
BsnI	GGCC	6 cut(s)	20, 109, 239, 392, 1127, 1254
Bso31I	GGTCTC	2 cut(s)	140, 1193
BsoBI	CYCGRG	1 cut(s)	266
Bsp120I	GGGCCC	1 cut(s)	107
Bsp1286I	GDGCHC	6 cut(s)	111, 168, 246, 408, 435, 1294
Bsp143I	GATC	6 cut(s)	121, 231, 739, 1024, 1246, 1519
Bsp19I	CCATGG	1 cut(s)	117
BspACI	CCGC	7 cut(s)	21, 23, 69, 72, 263, 379, 566
BspANI	GGCC	6 cut(s)	20, 109, 239, 392, 1127, 1254
BspCNI	CTCAG	3 cut(s)	180, 241, 1373
BspFNI	CGCG	2 cut(s)	23, 144
BspHI	TCATGA	2 cut(s)	1111, 1234
BspLI	GGNNCC	7 cut(s)	67, 109, 179, 870, 994, 1074, 1119
BspMI	ACCTGC	2 cut(s)	980, 1312
BspPI	GGATC	3 cut(s)	129, 1032, 1241
BspT107I	GGYRCC	3 cut(s)	65, 868, 992
BspTNI	GGTCTC	2 cut(s)	140, 1193
BsrFI	RCCGGY	2 cut(s)	16, 962
BsrI	ACTGG	2 cut(s)	605, 1026
BssAI	RCCGGY	2 cut(s)	16, 962
BssECI	CCNNGG	8 cut(s)	21, 61, 117, 150, 838, 996, 1095, 1121
BssMI	GATC	6 cut(s)	121, 231, 739, 1024, 1246, 1519
BssNI	GRCGYC	1 cut(s)	66
BssSI	CACGAG	1 cut(s)	335
BssT1I	CCWWGG	3 cut(s)	117, 150, 1095
Bst2BI	CACGAG	1 cut(s)	335
Bst2UI	CCWGG	3 cut(s)	389, 1187, 1251
Bst4CI	ACNGT	2 cut(s)	348, 1282
Bst6I	CTCTTC	3 cut(s)	188, 1158, 1505
BstACI	GRCGYC	1 cut(s)	66
BstAPI	GCANNNNNTGC	2 cut(s)	710, 1007
BstBAI	YACGTR	1 cut(s)	776
BstC8I	GCNNGC	6 cut(s)	18, 792, 1177, 1344, 1470, 1477
BstDEI	CTNAG	3 cut(s)	167, 228, 1360
BstDSI	CCRYGG	4 cut(s)	21, 117, 996, 1121
BstF5I	GGATG	6 cut(s)	322, 361, 475, 952, 1260, 1277
BstFNI	CGCG	2 cut(s)	23, 144
BstH2I	RGCGCY	4 cut(s)	69, 254, 446, 882
BstHHI	GCGC	5 cut(s)	68, 144, 253, 445, 881
BstKTI	GATC	6 cut(s)	124, 234, 742, 1027, 1249, 1522
BstMAI	GTCTC	4 cut(s)	140, 1193, 1288, 1507
BstMBI	GATC	6 cut(s)	121, 231, 739, 1024, 1246, 1519
BstMCI	CGRYCG	1 cut(s)	21
BstMWI	GCNNNNNNNGC	8 cut(s)	17, 250, 430, 565, 710, 1007, 1061, 1298
BstNI	CCWGG	3 cut(s)	389, 1187, 1251
BstNSI	RCATGY	3 cut(s)	503, 668, 1308
BstSCI	CCNGG	6 cut(s)	61, 104, 239, 387, 1185, 1249
BstSFI	CTRYAG	2 cut(s)	699, 1523
BstSLI	GKGCMC	1 cut(s)	111
BstUI	CGCG	2 cut(s)	23, 144
BstV1I	GCAGC	7 cut(s)	68, 71, 401, 543, 697, 1177, 1484
BstV2I	GAAGAC	1 cut(s)	1040
BstX2I	RGATCY	2 cut(s)	1024, 1519
BstXI	CCANNNNNNTGG	2 cut(s)	118, 400
BstYI	RGATCY	2 cut(s)	1024, 1519
BstZI	CGGCCG	1 cut(s)	18
BsuI	GTATCC	1 cut(s)	1080
BsuRI	GGCC	6 cut(s)	20, 109, 239, 392, 1127, 1254
BtgI	CCRYGG	4 cut(s)	21, 117, 996, 1121
BtsCI	GGATG	6 cut(s)	322, 361, 475, 952, 1260, 1277
BtsIMutI	CAGTG	2 cut(s)	598, 1019
BveI	ACCTGC	2 cut(s)	980, 1312
Cac8I	GCNNGC	6 cut(s)	18, 792, 1177, 1344, 1470, 1477
CaiI	CAGNNNCTG	3 cut(s)	710, 1064, 1286
CciI	TCATGA	2 cut(s)	1111, 1234
CfoI	GCGC	5 cut(s)	68, 144, 253, 445, 881
Cfr10I	RCCGGY	2 cut(s)	16, 962
Cfr13I	GGNCC	7 cut(s)	25, 107, 108, 1073, 1118, 1125, 1253
Cfr42I	CCGCGG	1 cut(s)	24
Csp6I	GTAC	5 cut(s)	277, 376, 720, 957, 1332
CviQI	GTAC	5 cut(s)	277, 376, 720, 957, 1332
DdeI	CTNAG	3 cut(s)	167, 228, 1360
DinI	GGCGCC	1 cut(s)	67
DpnI	GATC	6 cut(s)	123, 233, 741, 1026, 1248, 1521
DpnII	GATC	6 cut(s)	121, 231, 739, 1024, 1246, 1519
EaeI	YGGCCR	1 cut(s)	18
EagI	CGGCCG	1 cut(s)	18
Eam1104I	CTCTTC	3 cut(s)	188, 1158, 1505
EarI	CTCTTC	3 cut(s)	188, 1158, 1505
EciI	GGCGGA	1 cut(s)	252
Ecl136II	GAGCTC	3 cut(s)	166, 433, 1292
EclXI	CGGCCG	1 cut(s)	18
Eco130I	CCWWGG	3 cut(s)	117, 150, 1095
Eco24I	GRGCYC	5 cut(s)	111, 168, 246, 435, 1294
Eco31I	GGTCTC	2 cut(s)	140, 1193
Eco47I	GGWCC	3 cut(s)	25, 1073, 1118
Eco52I	CGGCCG	1 cut(s)	18
Eco53kI	GAGCTC	3 cut(s)	166, 433, 1292
Eco57I	CTGAAG	3 cut(s)	239, 1041, 1391
Eco72I	CACGTG	1 cut(s)	776
Eco88I	CYCGRG	1 cut(s)	266
EcoICRI	GAGCTC	3 cut(s)	166, 433, 1292
EcoO109I	RGGNCCY	1 cut(s)	1073
EcoRII	CCWGG	3 cut(s)	387, 1185, 1249
EcoT14I	CCWWGG	3 cut(s)	117, 150, 1095
EcoT38I	GRGCYC	5 cut(s)	111, 168, 246, 435, 1294
EgeI	GGCGCC	1 cut(s)	67
EheI	GGCGCC	1 cut(s)	67
ErhI	CCWWGG	3 cut(s)	117, 150, 1095
FaqI	GGGAC	3 cut(s)	1131, 1151, 1291
FauNDI	CATATG	1 cut(s)	898
FblI	GTMKAC	1 cut(s)	967
FokI	GGATG	6 cut(s)	329, 368, 482, 959, 1247, 1284
FriOI	GRGCYC	5 cut(s)	111, 168, 246, 435, 1294
FspBI	CTAG	2 cut(s)	134, 1517
GlaI	GCGC	5 cut(s)	67, 143, 252, 444, 880
GsaI	CCCAGC	1 cut(s)	459
GsuI	CTGGAG	3 cut(s)	389, 1308, 1417
HaeII	RGCGCY	4 cut(s)	69, 254, 446, 882
HaeIII	GGCC	6 cut(s)	20, 109, 239, 392, 1127, 1254
HapII	CCGG	6 cut(s)	17, 63, 105, 240, 425, 963
HhaI	GCGC	5 cut(s)	68, 144, 253, 445, 881
Hin1I	GRCGYC	1 cut(s)	66
Hin6I	GCGC	5 cut(s)	66, 142, 251, 443, 879
HinP1I	GCGC	5 cut(s)	66, 142, 251, 443, 879
HincII	GTYRAC	1 cut(s)	505
HindII	GTYRAC	1 cut(s)	505
HindIII	AAGCTT	1 cut(s)	1368
HinfI	GANTC	5 cut(s)	172, 197, 259, 1036, 1108
HpaII	CCGG	6 cut(s)	17, 63, 105, 240, 425, 963
HphI	GGTGA	1 cut(s)	106
Hpy166II	GTNNAC	3 cut(s)	505, 622, 968
Hpy188I	TCNGA	7 cut(s)	177, 231, 258, 768, 839, 1060, 1387
Hpy188III	TCNNGA	8 cut(s)	97, 169, 647, 737, 1112, 1235, 1287, 1396
Hpy8I	GTNNAC	3 cut(s)	505, 622, 968
Hpy99I	CGWCG	1 cut(s)	80
HpyAV	CCTTC	6 cut(s)	315, 644, 742, 856, 1138, 1409
HpyCH4III	ACNGT	2 cut(s)	348, 1282
HpyCH4IV	ACGT	3 cut(s)	126, 775, 1351
HpyCH4V	TGCA	7 cut(s)	87, 417, 692, 760, 779, 1321, 1342
HpyF10VI	GCNNNNNNNGC	8 cut(s)	17, 250, 430, 565, 710, 1007, 1061, 1298
HpyF3I	CTNAG	3 cut(s)	167, 228, 1360
HpySE526I	ACGT	3 cut(s)	126, 775, 1351
Hsp92I	GRCGYC	1 cut(s)	66
HspAI	GCGC	5 cut(s)	66, 142, 251, 443, 879
KasI	GGCGCC	1 cut(s)	65
KroI	GCCGGC	1 cut(s)	16
KroNI	GCCGGC	1 cut(s)	18
KspI	CCGCGG	1 cut(s)	24
Kzo9I	GATC	6 cut(s)	121, 231, 739, 1024, 1246, 1519
Lsp1109I	GCAGC	7 cut(s)	68, 71, 401, 543, 697, 1177, 1484
LweI	GCATC	3 cut(s)	295, 663, 788
MaeI	CTAG	2 cut(s)	134, 1517
MaeII	ACGT	3 cut(s)	126, 775, 1351
MaeIII	GTNAC	2 cut(s)	212, 1041
MalI	GATC	6 cut(s)	123, 233, 741, 1026, 1248, 1521
MboI	GATC	6 cut(s)	121, 231, 739, 1024, 1246, 1519
MfeI	CAATTG	1 cut(s)	1265
MflI	RGATCY	2 cut(s)	1024, 1519
MhlI	GDGCHC	6 cut(s)	111, 168, 246, 408, 435, 1294
MluCI	AATT	7 cut(s)	187, 328, 522, 902, 1079, 1101, 1265
Mly113I	GGCGCC	1 cut(s)	66
MlyI	GAGTC	3 cut(s)	191, 1030, 1102
MroNI	GCCGGC	1 cut(s)	16
MseI	TTAA	3 cut(s)	810, 908, 1205
MslI	CAYNNNNRTG	2 cut(s)	116, 398
MspA1I	CMGCKG	1 cut(s)	23
MspI	CCGG	6 cut(s)	17, 63, 105, 240, 425, 963
MspR9I	CCNGG	6 cut(s)	63, 106, 241, 389, 1187, 1251
MunI	CAATTG	1 cut(s)	1265
Mva1269I	GAATGC	2 cut(s)	417, 1344
MvaI	CCWGG	3 cut(s)	389, 1187, 1251
MvnI	CGCG	2 cut(s)	23, 144
MwoI	GCNNNNNNNGC	8 cut(s)	17, 250, 430, 565, 710, 1007, 1061, 1298
NaeI	GCCGGC	1 cut(s)	18
NarI	GGCGCC	1 cut(s)	66
NciI	CCSGG	3 cut(s)	63, 106, 241
NcoI	CCATGG	1 cut(s)	117
NdeI	CATATG	1 cut(s)	898
NdeII	GATC	6 cut(s)	121, 231, 739, 1024, 1246, 1519
NgoMIV	GCCGGC	1 cut(s)	16
NlaIV	GGNNCC	7 cut(s)	67, 109, 179, 870, 994, 1074, 1119
NmeAIII	GCCGAG	1 cut(s)	227
NspI	RCATGY	3 cut(s)	503, 668, 1308
PagI	TCATGA	2 cut(s)	1111, 1234
PaqCI	CACCTGC	1 cut(s)	980
PciI	ACATGT	1 cut(s)	1304
PctI	GAATGC	2 cut(s)	417, 1344
PdiI	GCCGGC	1 cut(s)	18
PfeI	GAWTC	2 cut(s)	172, 259
PflFI	GACNNNGTC	1 cut(s)	29
PleI	GAGTC	3 cut(s)	191, 1030, 1102
PluTI	GGCGCC	1 cut(s)	69
PmaCI	CACGTG	1 cut(s)	776
PmlI	CACGTG	1 cut(s)	776
PpsI	GAGTC	3 cut(s)	191, 1030, 1102
Ppu21I	YACGTR	1 cut(s)	776
PpuMI	RGGWCCY	1 cut(s)	1073
PscI	ACATGT	1 cut(s)	1304
PsiI	TTATAA	1 cut(s)	527
Psp124BI	GAGCTC	3 cut(s)	168, 435, 1294
Psp1406I	AACGTT	1 cut(s)	1351
Psp5II	RGGWCCY	1 cut(s)	1073
Psp6I	CCWGG	3 cut(s)	387, 1185, 1249
PspCI	CACGTG	1 cut(s)	776
PspFI	CCCAGC	1 cut(s)	455
PspGI	CCWGG	3 cut(s)	387, 1185, 1249
PspN4I	GGNNCC	7 cut(s)	67, 109, 179, 870, 994, 1074, 1119
PspOMI	GGGCCC	1 cut(s)	107
PspPI	GGNCC	7 cut(s)	25, 107, 108, 1073, 1118, 1125, 1253
PspPPI	RGGWCCY	1 cut(s)	1073
PstNI	CAGNNNCTG	3 cut(s)	710, 1064, 1286
PsuI	RGATCY	2 cut(s)	1024, 1519
PsyI	GACNNNGTC	1 cut(s)	29
RsaI	GTAC	5 cut(s)	278, 377, 721, 958, 1333
RsaNI	GTAC	5 cut(s)	277, 376, 720, 957, 1332
RseI	CAYNNNNRTG	2 cut(s)	116, 398
SacI	GAGCTC	3 cut(s)	168, 435, 1294
SacII	CCGCGG	1 cut(s)	24
SaqAI	TTAA	3 cut(s)	810, 908, 1205
Sau3AI	GATC	6 cut(s)	121, 231, 739, 1024, 1246, 1519
Sau96I	GGNCC	7 cut(s)	25, 107, 108, 1073, 1118, 1125, 1253
SchI	GAGTC	3 cut(s)	191, 1030, 1102
ScrFI	CCNGG	6 cut(s)	63, 106, 241, 389, 1187, 1251
SduI	GDGCHC	6 cut(s)	111, 168, 246, 408, 435, 1294
SfaNI	GCATC	3 cut(s)	295, 663, 788
SfcI	CTRYAG	2 cut(s)	699, 1523
SfoI	GGCGCC	1 cut(s)	67
Sfr303I	CCGCGG	1 cut(s)	24
SgrBI	CCGCGG	1 cut(s)	24
SinI	GGWCC	3 cut(s)	25, 1073, 1118
SmiMI	CAYNNNNRTG	2 cut(s)	116, 398
SmlI	CTYRAG	2 cut(s)	293, 1457
SmoI	CTYRAG	2 cut(s)	293, 1457
Sse9I	AATT	7 cut(s)	187, 328, 522, 902, 1079, 1101, 1265
SsiI	CCGC	7 cut(s)	21, 23, 69, 72, 263, 379, 566
SspDI	GGCGCC	1 cut(s)	65
SspI	AATATT	1 cut(s)	916
SspMI	CTAG	2 cut(s)	134, 1517
SstI	GAGCTC	3 cut(s)	168, 435, 1294
StyD4I	CCNGG	6 cut(s)	61, 104, 239, 387, 1185, 1249
StyI	CCWWGG	3 cut(s)	117, 150, 1095
TaaI	ACNGT	2 cut(s)	348, 1282
TaiI	ACGT	3 cut(s)	129, 778, 1354
TaqI	TCGA	3 cut(s)	195, 234, 343
TasI	AATT	7 cut(s)	187, 328, 522, 902, 1079, 1101, 1265
TauI	GCSGC	3 cut(s)	23, 71, 74
TfiI	GAWTC	2 cut(s)	172, 259
Tru1I	TTAA	3 cut(s)	810, 908, 1205
Tru9I	TTAA	3 cut(s)	810, 908, 1205
TscAI	CASTG	2 cut(s)	605, 1026
TseI	GCWGC	7 cut(s)	81, 84, 414, 556, 710, 1190, 1472
TspDTI	ATGAA	6 cut(s)	585, 659, 915, 1223, 1512, 1520
TspRI	CASTG	2 cut(s)	605, 1026
Tth111I	GACNNNGTC	1 cut(s)	29
VpaK11BI	GGWCC	3 cut(s)	25, 1073, 1118
XapI	RAATTY	1 cut(s)	1101
XceI	RCATGY	3 cut(s)	503, 668, 1308
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1271
XmiI	GTMKAC	1 cut(s)	967
XspI	CTAG	2 cut(s)	134, 1517

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.