Rh7BG096600

Belongs to the mitochondrial carrier (TC 2.A.29) family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
Physical Location & Seq
Reverse (-)
7133509 .. 7136550
3042 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG096600.1

Sequence Viewer

Length: 1062 bp
ATGGATGATGAGGAACTTGCTCATTTTGTGGAGCATGTTGACAAGGATAACAATGGAATTATAACTTTTGAGGAATGGAGAGATTTTCTGCTGCTTTATCCGCATGAAGCAACTATTGAGAACATATATCATCACTGGGAAAGGGTATGCCTTGTGGACATTGGAGAACAGGCTGTTATTCCAGAAGGCATCAGTAAGCATGTTCATAGGAGTAGATACTTTATTGCAGGGGCTATAGCAGGAGCTGCTTCTCGTACTGCTACTGCTCCTCTTGATCGGTTGAAGGTGATTTTGCAAGTTCAGACATCACGTGCATCTGTTGTGCCTGCGATAAGGAAGATATTTAAGGAAGATGGTTTTTTCGGGTTTTTCCGAGGTAATGGAATAAATGTTGTGAAGGTGGCACCTGAAAGTGCCATCAAGTTCTATACGTATGAATTGTTAAAAAATGTTATTGGAGAAACTATGGGGGAGAACAAGGATGATATTGGTACTGCGGGTAGACTTTTGGCTGGTGGTATGGCAGGTGCTGTGGCACAAACTGCTATATACCCACTGGATCTTGTGAAGACTCGGTTACAGACTTGTGCTTCAGAAGCTGGAAAGGGTCCTAAATTGGGGATACTGACCAAGGAAATTTTGACTCATGAGGGACCGCGGGCCTTCTATAAAGGACTACTACCATCTCTTCTTGGGATTGTCCCCTATGCTGGCATTGACTTGGCTGCCTATGAGACCTTAAAAGATATGTCAAAGACATATTTTCTTCATGATAATAGTGATCCTGGCCCTCTCATCCAATTGGGATGTGGGACAGTCTCTGGAGCTCTTGGAGCAACATGTGTTTATCCCTTGCAGGTTATTCGTACCAGAATGCAAGCTCAACGTTCTAACTCAGCAGAAGCTTATAGAGGAATGTCTGATGTATTCTGGAGAACGCTTCAGCGTGAAGGATATAGAGGTTTCTACAAGGGGTTGTTTCCAAATCTTCTCAAGGTTGTGCCAGCTGCAAGCATTACATATATGGTATATGAAGCCATGAAGAAGAGACTAGATCTATAG

Protein Analysis

353

Amino Acids

39.08

Weight (kDa)

7.69

Isoelectric Point (pI)

28.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Mito_carr PF00153 71 - 153 8.8e-25 Mitochondrial carrier protein
Mito_carr PF00153 165 - 252 1.3e-24 Mitochondrial carrier protein
Mito_carr PF00153 264 - 351 1.7e-25 Mitochondrial carrier protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 62
AarI CACCTGC 1 cut(s) 515
Acc36I ACCTGC 2 cut(s) 515, 847
AccB1I GGYRCC 1 cut(s) 403
AccI GTMKAC 1 cut(s) 502
AccII CGCG 1 cut(s) 658
AciI CCGC 4 cut(s) 101, 497, 656, 658
AclI AACGTT 1 cut(s) 886
AclWI GGATC 2 cut(s) 567, 776
AcsI RAATTY 1 cut(s) 636
AcuI CTGAAG 2 cut(s) 576, 926
AcvI CACGTG 1 cut(s) 311
AfaI GTAC 3 cut(s) 256, 493, 868
AfiI CCNNNNNNNGG 2 cut(s) 617, 710
AflIII ACRYGT 1 cut(s) 839
AgsI TTSAA 1 cut(s) 283
AjnI CCWGG 1 cut(s) 784
AluBI AGCT 6 cut(s) 245, 599, 827, 881, 905, 1007
AluI AGCT 6 cut(s) 245, 599, 827, 881, 905, 1007
Alw21I GWGCWC 1 cut(s) 829
Alw26I GTCTC 3 cut(s) 728, 823, 1042
AlwI GGATC 2 cut(s) 567, 776
AlwNI CAGNNNCTG 4 cut(s) 245, 530, 599, 821
AoxI GGCC 2 cut(s) 660, 787
ApeKI GCWGC 4 cut(s) 91, 245, 725, 1007
ApoI RAATTY 1 cut(s) 636
AspS9I GGNCC 4 cut(s) 608, 653, 660, 788
AsuHPI GGTGA 1 cut(s) 298
AvaII GGWCC 2 cut(s) 608, 653
BanI GGYRCC 1 cut(s) 403
BanII GRGCYC 1 cut(s) 829
BbrPI CACGTG 1 cut(s) 311
BbsI GAAGAC 1 cut(s) 575
Bbv12I GWGCWC 1 cut(s) 829
BbvI GCAGC 4 cut(s) 78, 232, 712, 994
BccI CCATC 3 cut(s) 347, 425, 691
BcgI CGANNNNNNTGC 2 cut(s) 845, 879
BciT130I CCWGG 1 cut(s) 786
BciVI GTATCC 1 cut(s) 615
BcoDI GTCTC 3 cut(s) 728, 823, 1042
BfaI CTAG 1 cut(s) 1052
BfmI CTRYAG 2 cut(s) 234, 1058
BfuAI ACCTGC 2 cut(s) 515, 847
BfuI GTATCC 1 cut(s) 615
BglII AGATCT 1 cut(s) 1054
BisI GCNGC 4 cut(s) 92, 246, 726, 1008
BlsI GCNGC 4 cut(s) 93, 247, 727, 1009
Bme1390I CCNGG 1 cut(s) 786
Bme18I GGWCC 2 cut(s) 608, 653
BmgT120I GGNCC 4 cut(s) 608, 653, 660, 788
BmiI GGNNCC 3 cut(s) 405, 609, 654
BmrFI CCNGG 1 cut(s) 786
BmrI ACTGGG 1 cut(s) 145
BmsI GCATC 2 cut(s) 198, 323
BmuI ACTGGG 1 cut(s) 145
BpiI GAAGAC 1 cut(s) 575
BpmI CTGGAG 2 cut(s) 843, 952
BpuEI CTTGAG 1 cut(s) 977
BsaAI YACGTR 2 cut(s) 311, 432
BsaI GGTCTC 1 cut(s) 728
BsaJI CCNNGG 3 cut(s) 373, 630, 656
Bsc4I CCNNNNNNNGG 2 cut(s) 617, 710
Bse1I ACTGG 2 cut(s) 140, 561
BseBI CCWGG 1 cut(s) 786
BseDI CCNNGG 3 cut(s) 373, 630, 656
BseGI GGATG 4 cut(s) 10, 487, 795, 812
BseLI CCNNNNNNNGG 2 cut(s) 617, 710
BseMII CTCAG 1 cut(s) 909
BseNI ACTGG 2 cut(s) 140, 561
BseRI GAGGAG 1 cut(s) 258
BseXI GCAGC 4 cut(s) 78, 232, 712, 994
Bsh1236I CGCG 1 cut(s) 658
BshFI GGCC 2 cut(s) 662, 789
BshNI GGYRCC 1 cut(s) 403
BsiHKAI GWGCWC 1 cut(s) 829
BslFI GGGAC 3 cut(s) 666, 686, 826
BslI CCNNNNNNNGG 2 cut(s) 617, 710
BsmAI GTCTC 3 cut(s) 728, 823, 1042
BsmFI GGGAC 3 cut(s) 666, 686, 826
BsmI GAATGC 1 cut(s) 879
BsnI GGCC 2 cut(s) 662, 789
Bso31I GGTCTC 1 cut(s) 728
Bsp1286I GDGCHC 1 cut(s) 829
Bsp143I GATC 4 cut(s) 274, 559, 781, 1054
BspACI CCGC 4 cut(s) 101, 497, 656, 658
BspANI GGCC 2 cut(s) 662, 789
BspCNI CTCAG 1 cut(s) 908
BspFNI CGCG 1 cut(s) 658
BspHI TCATGA 2 cut(s) 646, 769
BspLI GGNNCC 3 cut(s) 405, 609, 654
BspMI ACCTGC 2 cut(s) 515, 847
BspPI GGATC 2 cut(s) 567, 776
BspT107I GGYRCC 1 cut(s) 403
BspTNI GGTCTC 1 cut(s) 728
BsrI ACTGG 2 cut(s) 140, 561
BssECI CCNNGG 3 cut(s) 373, 630, 656
BssMI GATC 4 cut(s) 274, 559, 781, 1054
BssT1I CCWWGG 1 cut(s) 630
Bst2UI CCWGG 1 cut(s) 786
Bst4CI ACNGT 1 cut(s) 817
Bst6I CTCTTC 2 cut(s) 693, 1040
BstAPI GCANNNNNTGC 2 cut(s) 245, 542
BstBAI YACGTR 2 cut(s) 311, 432
BstC8I GCNNGC 6 cut(s) 327, 660, 712, 879, 1005, 1012
BstDEI CTNAG 1 cut(s) 895
BstDSI CCRYGG 1 cut(s) 656
BstF5I GGATG 4 cut(s) 10, 487, 795, 812
BstFNI CGCG 1 cut(s) 658
BstKTI GATC 4 cut(s) 277, 562, 784, 1057
BstMAI GTCTC 3 cut(s) 728, 823, 1042
BstMBI GATC 4 cut(s) 274, 559, 781, 1054
BstMWI GCNNNNNNNGC 5 cut(s) 100, 245, 542, 596, 833
BstNI CCWGG 1 cut(s) 786
BstNSI RCATGY 3 cut(s) 38, 203, 843
BstSCI CCNGG 1 cut(s) 784
BstSFI CTRYAG 2 cut(s) 234, 1058
BstSNI TACGTA 1 cut(s) 432
BstUI CGCG 1 cut(s) 658
BstV1I GCAGC 4 cut(s) 78, 232, 712, 994
BstV2I GAAGAC 1 cut(s) 575
BstX2I RGATCY 2 cut(s) 559, 1054
BstYI RGATCY 2 cut(s) 559, 1054
BsuI GTATCC 1 cut(s) 615
BsuRI GGCC 2 cut(s) 662, 789
BtgI CCRYGG 1 cut(s) 656
BtsCI GGATG 4 cut(s) 10, 487, 795, 812
BtsIMutI CAGTG 2 cut(s) 133, 554
BveI ACCTGC 2 cut(s) 515, 847
Cac8I GCNNGC 6 cut(s) 327, 660, 712, 879, 1005, 1012
CaiI CAGNNNCTG 4 cut(s) 245, 530, 599, 821
CciI TCATGA 2 cut(s) 646, 769
Cfr13I GGNCC 4 cut(s) 608, 653, 660, 788
Cfr42I CCGCGG 1 cut(s) 659
Csp6I GTAC 3 cut(s) 255, 492, 867
CviAII CATG 7 cut(s) 35, 104, 200, 647, 770, 840, 1039
CviQI GTAC 3 cut(s) 255, 492, 867
DdeI CTNAG 1 cut(s) 895
DpnI GATC 4 cut(s) 276, 561, 783, 1056
DpnII GATC 4 cut(s) 274, 559, 781, 1054
Eam1104I CTCTTC 2 cut(s) 693, 1040
EarI CTCTTC 2 cut(s) 693, 1040
Ecl136II GAGCTC 1 cut(s) 827
Eco105I TACGTA 1 cut(s) 432
Eco130I CCWWGG 1 cut(s) 630
Eco24I GRGCYC 1 cut(s) 829
Eco31I GGTCTC 1 cut(s) 728
Eco47I GGWCC 2 cut(s) 608, 653
Eco53kI GAGCTC 1 cut(s) 827
Eco57I CTGAAG 2 cut(s) 576, 926
Eco72I CACGTG 1 cut(s) 311
EcoICRI GAGCTC 1 cut(s) 827
EcoO109I RGGNCCY 1 cut(s) 608
EcoRII CCWGG 1 cut(s) 784
EcoT14I CCWWGG 1 cut(s) 630
EcoT38I GRGCYC 1 cut(s) 829
ErhI CCWWGG 1 cut(s) 630
FaeI CATG 7 cut(s) 38, 107, 203, 650, 773, 843, 1042
FaqI GGGAC 3 cut(s) 666, 686, 826
FatI CATG 7 cut(s) 34, 103, 199, 646, 769, 839, 1038
FauI CCCGC 2 cut(s) 490, 651
FblI GTMKAC 1 cut(s) 502
Fnu4HI GCNGC 4 cut(s) 92, 246, 726, 1008
FokI GGATG 4 cut(s) 17, 494, 782, 819
FriOI GRGCYC 1 cut(s) 829
Fsp4HI GCNGC 4 cut(s) 92, 246, 726, 1008
FspBI CTAG 1 cut(s) 1052
GluI GCNGC 4 cut(s) 92, 246, 726, 1008
GsuI CTGGAG 2 cut(s) 843, 952
HaeIII GGCC 2 cut(s) 662, 789
Hin1II CATG 7 cut(s) 38, 107, 203, 650, 773, 843, 1042
HincII GTYRAC 1 cut(s) 40
HindII GTYRAC 1 cut(s) 40
HindIII AAGCTT 1 cut(s) 903
HinfI GANTC 2 cut(s) 571, 643
HphI GGTGA 1 cut(s) 298
Hpy166II GTNNAC 3 cut(s) 40, 157, 503
Hpy188I TCNGA 4 cut(s) 303, 374, 595, 922
Hpy188III TCNNGA 6 cut(s) 182, 272, 647, 770, 822, 931
Hpy8I GTNNAC 3 cut(s) 40, 157, 503
HpyAV CCTTC 5 cut(s) 179, 277, 391, 673, 944
HpyCH4III ACNGT 1 cut(s) 817
HpyCH4IV ACGT 3 cut(s) 310, 431, 886
HpyCH4V TGCA 6 cut(s) 227, 295, 314, 856, 877, 1010
HpyF10VI GCNNNNNNNGC 5 cut(s) 100, 245, 542, 596, 833
HpyF3I CTNAG 1 cut(s) 895
HpySE526I ACGT 3 cut(s) 310, 431, 886
Hsp92II CATG 7 cut(s) 38, 107, 203, 650, 773, 843, 1042
KspI CCGCGG 1 cut(s) 659
Kzo9I GATC 4 cut(s) 274, 559, 781, 1054
LmnI GCTCC 5 cut(s) 31, 242, 271, 824, 833
Lsp1109I GCAGC 4 cut(s) 78, 232, 712, 994
LweI GCATC 2 cut(s) 198, 323
MaeI CTAG 1 cut(s) 1052
MaeII ACGT 3 cut(s) 310, 431, 886
MaeIII GTNAC 1 cut(s) 576
MalI GATC 4 cut(s) 276, 561, 783, 1056
MboI GATC 4 cut(s) 274, 559, 781, 1054
MboII GAAGA 8 cut(s) 349, 362, 580, 680, 758, 980, 1054, 1057
MfeI CAATTG 1 cut(s) 800
MflI RGATCY 2 cut(s) 559, 1054
MhlI GDGCHC 1 cut(s) 829
MluCI AATT 5 cut(s) 57, 437, 614, 636, 800
MlyI GAGTC 2 cut(s) 565, 637
MnlI CCTC 8 cut(s) 4, 64, 279, 368, 643, 801, 905, 953
MseI TTAA 3 cut(s) 345, 443, 740
MspA1I CMGCKG 2 cut(s) 658, 1007
MspR9I CCNGG 1 cut(s) 786
MunI CAATTG 1 cut(s) 800
Mva1269I GAATGC 1 cut(s) 879
MvaI CCWGG 1 cut(s) 786
MvnI CGCG 1 cut(s) 658
MwoI GCNNNNNNNGC 5 cut(s) 100, 245, 542, 596, 833
NdeII GATC 4 cut(s) 274, 559, 781, 1054
NlaIII CATG 7 cut(s) 38, 107, 203, 650, 773, 843, 1042
NlaIV GGNNCC 3 cut(s) 405, 609, 654
NspI RCATGY 3 cut(s) 38, 203, 843
PagI TCATGA 2 cut(s) 646, 769
PaqCI CACCTGC 1 cut(s) 515
PciI ACATGT 1 cut(s) 839
PctI GAATGC 1 cut(s) 879
PkrI GCNGC 4 cut(s) 93, 247, 727, 1009
PleI GAGTC 2 cut(s) 565, 637
PmaCI CACGTG 1 cut(s) 311
PmlI CACGTG 1 cut(s) 311
PpsI GAGTC 2 cut(s) 565, 637
Ppu21I YACGTR 2 cut(s) 311, 432
PpuMI RGGWCCY 1 cut(s) 608
PscI ACATGT 1 cut(s) 839
PsiI TTATAA 1 cut(s) 62
Psp124BI GAGCTC 1 cut(s) 829
Psp1406I AACGTT 1 cut(s) 886
Psp5II RGGWCCY 1 cut(s) 608
Psp6I CCWGG 1 cut(s) 784
PspCI CACGTG 1 cut(s) 311
PspGI CCWGG 1 cut(s) 784
PspN4I GGNNCC 3 cut(s) 405, 609, 654
PspPI GGNCC 4 cut(s) 608, 653, 660, 788
PspPPI RGGWCCY 1 cut(s) 608
PstNI CAGNNNCTG 4 cut(s) 245, 530, 599, 821
PsuI RGATCY 2 cut(s) 559, 1054
PvuII CAGCTG 1 cut(s) 1007
RsaI GTAC 3 cut(s) 256, 493, 868
RsaNI GTAC 3 cut(s) 255, 492, 867
SacI GAGCTC 1 cut(s) 829
SacII CCGCGG 1 cut(s) 659
SaqAI TTAA 3 cut(s) 345, 443, 740
SatI GCNGC 4 cut(s) 92, 246, 726, 1008
Sau3AI GATC 4 cut(s) 274, 559, 781, 1054
Sau96I GGNCC 4 cut(s) 608, 653, 660, 788
SchI GAGTC 2 cut(s) 565, 637
ScrFI CCNGG 1 cut(s) 786
SduI GDGCHC 1 cut(s) 829
SfaNI GCATC 2 cut(s) 198, 323
SfcI CTRYAG 2 cut(s) 234, 1058
Sfr303I CCGCGG 1 cut(s) 659
SgrBI CCGCGG 1 cut(s) 659
SinI GGWCC 2 cut(s) 608, 653
SmlI CTYRAG 1 cut(s) 992
SmoI CTYRAG 1 cut(s) 992
SnaBI TACGTA 1 cut(s) 432
Sse9I AATT 5 cut(s) 57, 437, 614, 636, 800
SsiI CCGC 4 cut(s) 101, 497, 656, 658
SspMI CTAG 1 cut(s) 1052
SstI GAGCTC 1 cut(s) 829
StyD4I CCNGG 1 cut(s) 784
StyI CCWWGG 1 cut(s) 630
TaaI ACNGT 1 cut(s) 817
TaiI ACGT 3 cut(s) 313, 434, 889
TasI AATT 5 cut(s) 57, 437, 614, 636, 800
Tru1I TTAA 3 cut(s) 345, 443, 740
Tru9I TTAA 3 cut(s) 345, 443, 740
TscAI CASTG 2 cut(s) 140, 561
TseI GCWGC 4 cut(s) 91, 245, 725, 1007
TspDTI ATGAA 6 cut(s) 120, 194, 450, 758, 1047, 1055
TspRI CASTG 2 cut(s) 140, 561
VpaK11BI GGWCC 2 cut(s) 608, 653
XapI RAATTY 1 cut(s) 636
XceI RCATGY 3 cut(s) 38, 203, 843
XcmI CCANNNNNNNNNTGG 1 cut(s) 806
XmiI GTMKAC 1 cut(s) 502
XspI CTAG 1 cut(s) 1052
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.