Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0000767

Physical Location & Seq

Genomic Coordinates Forward (+)

59697051 .. 59700204

Gene Structure 3154 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00266430.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1485 bp

ATGACGGCAGACACCAACCCCCGCGCCGCCGCCGACGGCTGCTGCAACCCCGTCAAGAAGTCCGGGCCCATCACCATGGATCACGTTCTTCTAGCTCTGCGCGAGACCAAGGAGGAGAGAGAGCTCAGGATTCGGAGCCTCTTCAATTTCTTCGACTCTGCCAATCTGGGTTACTTGGACTATGCTCAGATCGAGGCCGGCCTCTCGGCGCTTCAGATTCCGCCCGAGTATAAGTACGCAAAGGATTTGCTCAAGGTTTGTGATGCTGATAGAGATGGAAGGGTCAATTACCACGAGTTTCGACAGTATATGGATGACAAGGAGCTGGAGCTGTACCGCATTTTCCAGGCCATTGATGTGGAGCACAATGGCTGCATTCTGCCGGAGGAGCTCTGGGAGGCGCTCGTCAAGGCTGGGATTGAAATGGATGATGAGGAACTTGCTCATTTTGTGGAGCATGTTGACAAGGATAACAATGGAATTATAACTTTTGAGGAATGGAGAGATTTTCTGCTGCTTTATCCGCATGAAGCAACTATTGAGAACATATATCATCACTGGGAAAGGGTATGCCTTGTGGACATTGGAGAACAGGCTGTTATTCCAGAAGGCATCAGTAAGCATGTTCATAGGAGTAGATACTTTATTGCAGGGGCTATAGCAGGAGCTGCTTCTCGTACTGCTACTGCTCCTCTTGATCGGTTGAAGGTGGTTTTGCAAGTTCAGACATCACGTGCGTCTGTTGTGCCTGCGATAAGGAAGATATTTAAGGAAGATGGTTTTTTGGGGTTTTTCCGAGGTAATGGAATAAATGTTGTGAAGGTGGCACCCGAAAGTGCCATCAAGTTCTATACGTATGAATTGTTAAAAAATATTATTGGAGAAACTATGGGGGAGAACAAGGATGATATTGGTACTGCGGGTAGACTTTTGGCTGGTGGTATGGCAGGTGCCGTGGCACAAACTGCTATATACCCACTGGATCTTGTGAAGACTCGGTTACAGACTTGTGCTTCAGAAGCTGGAAAGGGTCCTAAATTGGGGATACTGACCAAGGAAATTTTGACTCATGAGGGACCACGGGCCTTCTATAAAGGACTACTACCATCTCTTCTTGGGATTGTCCCCTATGCTGGCATTGACCTGGCTGCCTATGAGACCTTAAAAGATATGTCAAAGACATATTTTCTTCATGATAATAGTGATCCTGGCCCTCTCATCCAATTGGGATGTGGGACAGTCTCTGGAGCTCTTGGAGCAACATGTGTTTATCCCTTGCAGGTTATTCGTACCAGAATGCAAGCTCAACGTTCTAACTCAGCAGAAGCTTATAGAGGAATGTCTGATGTATTCTGGAGAACGCTTCAGCGTGAAGGATATAGAGGTTTCTACAAGGGGTTGTTTCCAAATCTTCTCAAGGTTGTGCCAGCTGCAAGCATTACATATATGGTATATGAAGCCATGAAGAAGAGACTAGATCTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000295 GO:0003674 GO:0005215 GO:0005346 GO:0005347 GO:0005488 GO:0005509 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0006810 GO:0006811 GO:0006820 GO:0006839 GO:0006855 GO:0006862 GO:0006950 GO:0006979 GO:0008150 GO:0008509 GO:0008514 GO:0009987 GO:0010035 GO:0010038 GO:0010941 GO:0015075 GO:0015215 GO:0015216 GO:0015217 GO:0015238 GO:0015605 GO:0015711 GO:0015748 GO:0015865 GO:0015866 GO:0015867 GO:0015868 GO:0015893 GO:0015931 GO:0015932 GO:0016020 GO:0016021 GO:0019866 GO:0022857 GO:0031090 GO:0031224 GO:0031966 GO:0031967 GO:0031975 GO:0033554 GO:0034220 GO:0034599 GO:0042221 GO:0042493 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0046872 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051503 GO:0051592 GO:0051716 GO:0055085 GO:0065007 GO:0070887 GO:0071241 GO:0071248 GO:0071277 GO:0071702 GO:0071705 GO:0098656 GO:1901264 GO:1901505 GO:1901679

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

EF-hand_5 EF-hand_7 EF-hand_8 Mito_carr

Protein Analysis

494

Amino Acids

55.19

Weight (kDa)

5.91

Isoelectric Point (pI)

31.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
EF-hand_7	PF13499	43 - 104	6.6e-07	EF-hand domain pair
EF-hand_7	PF13499	110 - 166	2.2e-10	EF-hand domain pair
Mito_carr	PF00153	212 - 294	1.7e-24	Mitochondrial carrier protein
Mito_carr	PF00153	306 - 393	2.3e-24	Mitochondrial carrier protein
Mito_carr	PF00153	405 - 492	3e-25	Mitochondrial carrier protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0000767)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G07320 AT5G51050 AT5G61810 AT5G61810
fragaria_vesca	FvH4_5g09810 FvH4_5g09810 FvH4_5g09810 FvH4_6g54390 FvH4_6g54390 FvH4_6g54390 FvH4_6g54390 FvH4_6g54390 FvH4_6g54390 FvH4_6g54390 FvH4_6g54390 FvH4_6g54390 FvH4_6g54390 FvH4_6g54390 FvH4_6g54390 FvH4_6g54390 FvH4_6g54390 FvH4_6g54390 FvH4_6g54390 FvH4_6g54390
malus_domestica	MD00G1075800.v1.1 MD14G1145100.v1.1 MD17G1005800.v1.1
prunus_persica	Prupe.3G314500_v2.0.a1 Prupe.3G314500_v2.0.a1 Prupe.3G314500_v2.0.a1 Prupe.3G314500_v2.0.a1 Prupe.3G314500_v2.0.a1 Prupe.5G139700_v2.0.a1 Prupe.5G139700_v2.0.a1 Prupe.5G139700_v2.0.a1
pyrus_communis	pycom06g11980 pycom111g00140 pycom17g00150
rosa_chinensis	RchiOBHm_Chr2g0176621 RchiOBHm_Chr7g0188421
rosa_laevigata	RLG00000004696 RLG00000022430
rosa_multiflora	Rmu_sc0000952.1_g000002 Rmu_sc0001417.1_g000014
rosa_roxburghii	Rroxscaffold_2G00076260 Rroxscaffold_3G00266430
rosa_rugosa	Rorug02G0596400 Rorug02G0596500 Rorug02G0596600 Rorug02G0596600 Rorug02G0596600 Rorug02G0596600 Rorug02G0596600 Rorug02G0596600 Rorug02G0596700 Rorug02G0596800 Rorug02G0596900 Rorug06G0490400 Rorug06G0490400
rosa_samantha	Rh2AG674500 Rh2BG685600 Rh2CG648900 Rh2DG699800 Rh7AG095100 Rh7BG096600 Rh7CG097300 Rh7DG096800
rosa_wichuraiana	Rw0G015640 Rw2G055350 Rw7G008200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	485
AarI	CACCTGC	1 cut(s)	938
Acc36I	ACCTGC	2 cut(s)	938, 1270
AccB1I	GGYRCC	2 cut(s)	826, 950
AccI	GTMKAC	1 cut(s)	925
AccII	CGCG	2 cut(s)	24, 102
AciI	CCGC	7 cut(s)	22, 27, 30, 221, 337, 524, 920
AclI	AACGTT	1 cut(s)	1309
AclWI	GGATC	3 cut(s)	87, 990, 1199
AcsI	RAATTY	1 cut(s)	1059
AcuI	CTGAAG	3 cut(s)	197, 999, 1349
AcvI	CACGTG	1 cut(s)	734
AfaI	GTAC	5 cut(s)	236, 335, 679, 916, 1291
AfiI	CCNNNNNNNGG	2 cut(s)	1040, 1133
AflIII	ACRYGT	1 cut(s)	1262
AgsI	TTSAA	3 cut(s)	145, 422, 706
AjnI	CCWGG	3 cut(s)	345, 1143, 1207
Alw21I	GWGCWC	4 cut(s)	126, 366, 393, 1252
Alw26I	GTCTC	4 cut(s)	98, 1151, 1246, 1465
AlwI	GGATC	3 cut(s)	87, 990, 1199
AlwNI	CAGNNNCTG	3 cut(s)	668, 1022, 1244
Ama87I	CYCGRG	1 cut(s)	224
AoxI	GGCC	6 cut(s)	65, 195, 199, 348, 1083, 1210
ApaI	GGGCCC	1 cut(s)	69
ApeKI	GCWGC	7 cut(s)	39, 42, 372, 514, 668, 1148, 1430
ApoI	RAATTY	1 cut(s)	1059
AspLEI	GCGC	4 cut(s)	26, 102, 211, 403
AspS9I	GGNCC	6 cut(s)	65, 66, 1031, 1076, 1083, 1211
AsuC2I	CCSGG	1 cut(s)	64
AsuHPI	GGTGA	1 cut(s)	64
AvaI	CYCGRG	1 cut(s)	224
AvaII	GGWCC	2 cut(s)	1031, 1076
BaeGI	GKGCMC	1 cut(s)	69
BanI	GGYRCC	2 cut(s)	826, 950
BanII	GRGCYC	4 cut(s)	69, 126, 393, 1252
BauI	CACGAG	1 cut(s)	293
BbrPI	CACGTG	1 cut(s)	734
BbsI	GAAGAC	1 cut(s)	998
Bbv12I	GWGCWC	4 cut(s)	126, 366, 393, 1252
BbvI	GCAGC	7 cut(s)	26, 29, 359, 501, 655, 1135, 1417
BccI	CCATC	5 cut(s)	77, 269, 770, 848, 1114
BceAI	ACGGC	3 cut(s)	21, 52, 938
BcgI	CGANNNNNNTGC	2 cut(s)	1268, 1302
BciT130I	CCWGG	3 cut(s)	347, 1145, 1209
BciVI	GTATCC	1 cut(s)	1038
BcnI	CCSGG	1 cut(s)	64
BcoDI	GTCTC	4 cut(s)	98, 1151, 1246, 1465
BfaI	CTAG	2 cut(s)	92, 1475
BfmI	CTRYAG	2 cut(s)	657, 1481
BfoI	RGCGCY	2 cut(s)	212, 404
BfuAI	ACCTGC	2 cut(s)	938, 1270
BfuI	GTATCC	1 cut(s)	1038
BglII	AGATCT	1 cut(s)	1477
BisI	GCNGC	9 cut(s)	27, 30, 40, 43, 373, 515, 669, 1149, 1431
BlsI	GCNGC	9 cut(s)	28, 31, 41, 44, 374, 516, 670, 1150, 1432
Bme1390I	CCNGG	4 cut(s)	64, 347, 1145, 1209
Bme18I	GGWCC	2 cut(s)	1031, 1076
BmeT110I	CYCGRG	1 cut(s)	224
BmgT120I	GGNCC	6 cut(s)	65, 66, 1031, 1076, 1083, 1211
BmiI	GGNNCC	6 cut(s)	67, 137, 828, 952, 1032, 1077
BmrFI	CCNGG	4 cut(s)	64, 347, 1145, 1209
BmrI	ACTGGG	1 cut(s)	568
BmsI	GCATC	2 cut(s)	253, 621
BmuI	ACTGGG	1 cut(s)	568
BpiI	GAAGAC	1 cut(s)	998
BpmI	CTGGAG	3 cut(s)	347, 1266, 1375
Bpu10I	CCTNAGC	1 cut(s)	125
BpuEI	CTTGAG	2 cut(s)	236, 1400
BpuMI	CCSGG	1 cut(s)	64
BsaAI	YACGTR	2 cut(s)	734, 855
BsaI	GGTCTC	2 cut(s)	98, 1151
BsaJI	CCNNGG	6 cut(s)	75, 108, 796, 954, 1053, 1079
Bsc4I	CCNNNNNNNGG	2 cut(s)	1040, 1133
Bse118I	RCCGGY	1 cut(s)	197
Bse1I	ACTGG	2 cut(s)	563, 984
BseBI	CCWGG	3 cut(s)	347, 1145, 1209
BseDI	CCNNGG	6 cut(s)	75, 108, 796, 954, 1053, 1079
BseGI	GGATG	5 cut(s)	319, 433, 910, 1218, 1235
BseLI	CCNNNNNNNGG	2 cut(s)	1040, 1133
BseMII	CTCAG	3 cut(s)	139, 200, 1332
BseNI	ACTGG	2 cut(s)	563, 984
BseRI	GAGGAG	3 cut(s)	128, 401, 681
BseSI	GKGCMC	1 cut(s)	69
BseXI	GCAGC	7 cut(s)	26, 29, 359, 501, 655, 1135, 1417
BseYI	CCCAGC	1 cut(s)	413
Bsh1236I	CGCG	2 cut(s)	24, 102
BshFI	GGCC	6 cut(s)	67, 197, 201, 350, 1085, 1212
BshNI	GGYRCC	2 cut(s)	826, 950
BsiHKAI	GWGCWC	4 cut(s)	126, 366, 393, 1252
BsiHKCI	CYCGRG	1 cut(s)	224
BsiSI	CCGG	3 cut(s)	63, 198, 383
BslFI	GGGAC	3 cut(s)	1089, 1109, 1249
BslI	CCNNNNNNNGG	2 cut(s)	1040, 1133
BsmAI	GTCTC	4 cut(s)	98, 1151, 1246, 1465
BsmFI	GGGAC	3 cut(s)	1089, 1109, 1249
BsmI	GAATGC	2 cut(s)	375, 1302
BsnI	GGCC	6 cut(s)	67, 197, 201, 350, 1085, 1212
Bso31I	GGTCTC	2 cut(s)	98, 1151
BsoBI	CYCGRG	1 cut(s)	224
Bsp120I	GGGCCC	1 cut(s)	65
Bsp1286I	GDGCHC	5 cut(s)	69, 126, 366, 393, 1252
Bsp143I	GATC	6 cut(s)	79, 189, 697, 982, 1204, 1477
Bsp19I	CCATGG	1 cut(s)	75
BspACI	CCGC	7 cut(s)	22, 27, 30, 221, 337, 524, 920
BspANI	GGCC	6 cut(s)	67, 197, 201, 350, 1085, 1212
BspCNI	CTCAG	3 cut(s)	138, 199, 1331
BspFNI	CGCG	2 cut(s)	24, 102
BspHI	TCATGA	2 cut(s)	1069, 1192
BspLI	GGNNCC	6 cut(s)	67, 137, 828, 952, 1032, 1077
BspMI	ACCTGC	2 cut(s)	938, 1270
BspPI	GGATC	3 cut(s)	87, 990, 1199
BspT107I	GGYRCC	2 cut(s)	826, 950
BspTNI	GGTCTC	2 cut(s)	98, 1151
BsrFI	RCCGGY	1 cut(s)	197
BsrI	ACTGG	2 cut(s)	563, 984
BssAI	RCCGGY	1 cut(s)	197
BssECI	CCNNGG	6 cut(s)	75, 108, 796, 954, 1053, 1079
BssMI	GATC	6 cut(s)	79, 189, 697, 982, 1204, 1477
BssSI	CACGAG	1 cut(s)	293
BssT1I	CCWWGG	3 cut(s)	75, 108, 1053
Bst2BI	CACGAG	1 cut(s)	293
Bst2UI	CCWGG	3 cut(s)	347, 1145, 1209
Bst4CI	ACNGT	2 cut(s)	306, 1240
Bst6I	CTCTTC	3 cut(s)	146, 1116, 1463
BstAPI	GCANNNNNTGC	2 cut(s)	668, 965
BstBAI	YACGTR	2 cut(s)	734, 855
BstC8I	GCNNGC	6 cut(s)	199, 750, 1135, 1302, 1428, 1435
BstDEI	CTNAG	3 cut(s)	125, 186, 1318
BstDSI	CCRYGG	3 cut(s)	75, 954, 1079
BstF5I	GGATG	5 cut(s)	319, 433, 910, 1218, 1235
BstFNI	CGCG	2 cut(s)	24, 102
BstH2I	RGCGCY	2 cut(s)	212, 404
BstHHI	GCGC	4 cut(s)	26, 102, 211, 403
BstKTI	GATC	6 cut(s)	82, 192, 700, 985, 1207, 1480
BstMAI	GTCTC	4 cut(s)	98, 1151, 1246, 1465
BstMBI	GATC	6 cut(s)	79, 189, 697, 982, 1204, 1477
BstMWI	GCNNNNNNNGC	6 cut(s)	388, 523, 668, 965, 1019, 1256
BstNI	CCWGG	3 cut(s)	347, 1145, 1209
BstNSI	RCATGY	3 cut(s)	461, 626, 1266
BstSCI	CCNGG	4 cut(s)	62, 345, 1143, 1207
BstSFI	CTRYAG	2 cut(s)	657, 1481
BstSLI	GKGCMC	1 cut(s)	69
BstSNI	TACGTA	1 cut(s)	855
BstUI	CGCG	2 cut(s)	24, 102
BstV1I	GCAGC	7 cut(s)	26, 29, 359, 501, 655, 1135, 1417
BstV2I	GAAGAC	1 cut(s)	998
BstX2I	RGATCY	2 cut(s)	982, 1477
BstXI	CCANNNNNNTGG	2 cut(s)	76, 358
BstYI	RGATCY	2 cut(s)	982, 1477
BsuI	GTATCC	1 cut(s)	1038
BsuRI	GGCC	6 cut(s)	67, 197, 201, 350, 1085, 1212
BtgI	CCRYGG	3 cut(s)	75, 954, 1079
BtsCI	GGATG	5 cut(s)	319, 433, 910, 1218, 1235
BtsIMutI	CAGTG	2 cut(s)	556, 977
BveI	ACCTGC	2 cut(s)	938, 1270
Cac8I	GCNNGC	6 cut(s)	199, 750, 1135, 1302, 1428, 1435
CaiI	CAGNNNCTG	3 cut(s)	668, 1022, 1244
CciI	TCATGA	2 cut(s)	1069, 1192
CfoI	GCGC	4 cut(s)	26, 102, 211, 403
Cfr10I	RCCGGY	1 cut(s)	197
Cfr13I	GGNCC	6 cut(s)	65, 66, 1031, 1076, 1083, 1211
CseI	GACGC	1 cut(s)	726
Csp6I	GTAC	5 cut(s)	235, 334, 678, 915, 1290
CviAII	CATG	8 cut(s)	76, 458, 527, 623, 1070, 1193, 1263, 1462
CviQI	GTAC	5 cut(s)	235, 334, 678, 915, 1290
DdeI	CTNAG	3 cut(s)	125, 186, 1318
DpnI	GATC	6 cut(s)	81, 191, 699, 984, 1206, 1479
DpnII	GATC	6 cut(s)	79, 189, 697, 982, 1204, 1477
Eam1104I	CTCTTC	3 cut(s)	146, 1116, 1463
EarI	CTCTTC	3 cut(s)	146, 1116, 1463
EciI	GGCGGA	1 cut(s)	210
Ecl136II	GAGCTC	3 cut(s)	124, 391, 1250
Eco105I	TACGTA	1 cut(s)	855
Eco130I	CCWWGG	3 cut(s)	75, 108, 1053
Eco24I	GRGCYC	4 cut(s)	69, 126, 393, 1252
Eco31I	GGTCTC	2 cut(s)	98, 1151
Eco47I	GGWCC	2 cut(s)	1031, 1076
Eco53kI	GAGCTC	3 cut(s)	124, 391, 1250
Eco57I	CTGAAG	3 cut(s)	197, 999, 1349
Eco72I	CACGTG	1 cut(s)	734
Eco88I	CYCGRG	1 cut(s)	224
EcoICRI	GAGCTC	3 cut(s)	124, 391, 1250
EcoO109I	RGGNCCY	1 cut(s)	1031
EcoRII	CCWGG	3 cut(s)	345, 1143, 1207
EcoT14I	CCWWGG	3 cut(s)	75, 108, 1053
EcoT38I	GRGCYC	4 cut(s)	69, 126, 393, 1252
ErhI	CCWWGG	3 cut(s)	75, 108, 1053
FaeI	CATG	8 cut(s)	79, 461, 530, 626, 1073, 1196, 1266, 1465
FaqI	GGGAC	3 cut(s)	1089, 1109, 1249
FatI	CATG	8 cut(s)	75, 457, 526, 622, 1069, 1192, 1262, 1461
FauI	CCCGC	2 cut(s)	29, 913
FblI	GTMKAC	1 cut(s)	925
Fnu4HI	GCNGC	9 cut(s)	27, 30, 40, 43, 373, 515, 669, 1149, 1431
FokI	GGATG	5 cut(s)	326, 440, 917, 1205, 1242
FriOI	GRGCYC	4 cut(s)	69, 126, 393, 1252
FseI	GGCCGGCC	1 cut(s)	201
Fsp4HI	GCNGC	9 cut(s)	27, 30, 40, 43, 373, 515, 669, 1149, 1431
FspBI	CTAG	2 cut(s)	92, 1475
GlaI	GCGC	4 cut(s)	25, 101, 210, 402
GluI	GCNGC	9 cut(s)	27, 30, 40, 43, 373, 515, 669, 1149, 1431
GsaI	CCCAGC	1 cut(s)	417
GsuI	CTGGAG	3 cut(s)	347, 1266, 1375
HaeII	RGCGCY	2 cut(s)	212, 404
HaeIII	GGCC	6 cut(s)	67, 197, 201, 350, 1085, 1212
HapII	CCGG	3 cut(s)	63, 198, 383
HgaI	GACGC	1 cut(s)	726
HhaI	GCGC	4 cut(s)	26, 102, 211, 403
Hin1II	CATG	8 cut(s)	79, 461, 530, 626, 1073, 1196, 1266, 1465
Hin6I	GCGC	4 cut(s)	24, 100, 209, 401
HinP1I	GCGC	4 cut(s)	24, 100, 209, 401
HincII	GTYRAC	1 cut(s)	463
HindII	GTYRAC	1 cut(s)	463
HindIII	AAGCTT	1 cut(s)	1326
HinfI	GANTC	5 cut(s)	130, 155, 217, 994, 1066
HpaII	CCGG	3 cut(s)	63, 198, 383
HphI	GGTGA	1 cut(s)	64
Hpy166II	GTNNAC	3 cut(s)	463, 580, 926
Hpy188I	TCNGA	7 cut(s)	135, 189, 216, 726, 797, 1018, 1345
Hpy188III	TCNNGA	8 cut(s)	55, 127, 605, 695, 1070, 1193, 1245, 1354
Hpy8I	GTNNAC	3 cut(s)	463, 580, 926
Hpy99I	CGWCG	1 cut(s)	38
HpyAV	CCTTC	6 cut(s)	273, 602, 700, 814, 1096, 1367
HpyCH4III	ACNGT	2 cut(s)	306, 1240
HpyCH4IV	ACGT	4 cut(s)	84, 733, 854, 1309
HpyCH4V	TGCA	7 cut(s)	45, 375, 650, 718, 1279, 1300, 1433
HpyF10VI	GCNNNNNNNGC	6 cut(s)	388, 523, 668, 965, 1019, 1256
HpyF3I	CTNAG	3 cut(s)	125, 186, 1318
HpySE526I	ACGT	4 cut(s)	84, 733, 854, 1309
Hsp92II	CATG	8 cut(s)	79, 461, 530, 626, 1073, 1196, 1266, 1465
HspAI	GCGC	4 cut(s)	24, 100, 209, 401
KroI	GCCGGC	1 cut(s)	197
KroNI	GCCGGC	1 cut(s)	199
Kzo9I	GATC	6 cut(s)	79, 189, 697, 982, 1204, 1477
Lsp1109I	GCAGC	7 cut(s)	26, 29, 359, 501, 655, 1135, 1417
LweI	GCATC	2 cut(s)	253, 621
MaeI	CTAG	2 cut(s)	92, 1475
MaeII	ACGT	4 cut(s)	84, 733, 854, 1309
MaeIII	GTNAC	2 cut(s)	170, 999
MalI	GATC	6 cut(s)	81, 191, 699, 984, 1206, 1479
MboI	GATC	6 cut(s)	79, 189, 697, 982, 1204, 1477
MfeI	CAATTG	1 cut(s)	1223
MflI	RGATCY	2 cut(s)	982, 1477
MhlI	GDGCHC	5 cut(s)	69, 126, 366, 393, 1252
MluCI	AATT	7 cut(s)	145, 286, 480, 860, 1037, 1059, 1223
MlyI	GAGTC	3 cut(s)	149, 988, 1060
MroNI	GCCGGC	1 cut(s)	197
MseI	TTAA	3 cut(s)	768, 866, 1163
MslI	CAYNNNNRTG	2 cut(s)	74, 356
MspA1I	CMGCKG	1 cut(s)	1430
MspI	CCGG	3 cut(s)	63, 198, 383
MspR9I	CCNGG	4 cut(s)	64, 347, 1145, 1209
MunI	CAATTG	1 cut(s)	1223
Mva1269I	GAATGC	2 cut(s)	375, 1302
MvaI	CCWGG	3 cut(s)	347, 1145, 1209
MvnI	CGCG	2 cut(s)	24, 102
MwoI	GCNNNNNNNGC	6 cut(s)	388, 523, 668, 965, 1019, 1256
NaeI	GCCGGC	1 cut(s)	199
NciI	CCSGG	1 cut(s)	64
NcoI	CCATGG	1 cut(s)	75
NdeII	GATC	6 cut(s)	79, 189, 697, 982, 1204, 1477
NgoMIV	GCCGGC	1 cut(s)	197
NlaIII	CATG	8 cut(s)	79, 461, 530, 626, 1073, 1196, 1266, 1465
NlaIV	GGNNCC	6 cut(s)	67, 137, 828, 952, 1032, 1077
NmeAIII	GCCGAG	1 cut(s)	185
NspI	RCATGY	3 cut(s)	461, 626, 1266
PagI	TCATGA	2 cut(s)	1069, 1192
PaqCI	CACCTGC	1 cut(s)	938
PciI	ACATGT	1 cut(s)	1262
PctI	GAATGC	2 cut(s)	375, 1302
PdiI	GCCGGC	1 cut(s)	199
PfeI	GAWTC	2 cut(s)	130, 217
PkrI	GCNGC	9 cut(s)	28, 31, 41, 44, 374, 516, 670, 1150, 1432
PleI	GAGTC	3 cut(s)	149, 988, 1060
PmaCI	CACGTG	1 cut(s)	734
PmlI	CACGTG	1 cut(s)	734
PpsI	GAGTC	3 cut(s)	149, 988, 1060
Ppu21I	YACGTR	2 cut(s)	734, 855
PpuMI	RGGWCCY	1 cut(s)	1031
PscI	ACATGT	1 cut(s)	1262
PsiI	TTATAA	1 cut(s)	485
Psp124BI	GAGCTC	3 cut(s)	126, 393, 1252
Psp1406I	AACGTT	1 cut(s)	1309
Psp5II	RGGWCCY	1 cut(s)	1031
Psp6I	CCWGG	3 cut(s)	345, 1143, 1207
PspCI	CACGTG	1 cut(s)	734
PspFI	CCCAGC	1 cut(s)	413
PspGI	CCWGG	3 cut(s)	345, 1143, 1207
PspN4I	GGNNCC	6 cut(s)	67, 137, 828, 952, 1032, 1077
PspOMI	GGGCCC	1 cut(s)	65
PspPI	GGNCC	6 cut(s)	65, 66, 1031, 1076, 1083, 1211
PspPPI	RGGWCCY	1 cut(s)	1031
PstNI	CAGNNNCTG	3 cut(s)	668, 1022, 1244
PsuI	RGATCY	2 cut(s)	982, 1477
PvuII	CAGCTG	1 cut(s)	1430
RigI	GGCCGGCC	1 cut(s)	201
RsaI	GTAC	5 cut(s)	236, 335, 679, 916, 1291
RsaNI	GTAC	5 cut(s)	235, 334, 678, 915, 1290
RseI	CAYNNNNRTG	2 cut(s)	74, 356
SacI	GAGCTC	3 cut(s)	126, 393, 1252
SaqAI	TTAA	3 cut(s)	768, 866, 1163
SatI	GCNGC	9 cut(s)	27, 30, 40, 43, 373, 515, 669, 1149, 1431
Sau3AI	GATC	6 cut(s)	79, 189, 697, 982, 1204, 1477
Sau96I	GGNCC	6 cut(s)	65, 66, 1031, 1076, 1083, 1211
SchI	GAGTC	3 cut(s)	149, 988, 1060
ScrFI	CCNGG	4 cut(s)	64, 347, 1145, 1209
SduI	GDGCHC	5 cut(s)	69, 126, 366, 393, 1252
SfaNI	GCATC	2 cut(s)	253, 621
SfcI	CTRYAG	2 cut(s)	657, 1481
SinI	GGWCC	2 cut(s)	1031, 1076
SmiMI	CAYNNNNRTG	2 cut(s)	74, 356
SmlI	CTYRAG	2 cut(s)	251, 1415
SmoI	CTYRAG	2 cut(s)	251, 1415
SnaBI	TACGTA	1 cut(s)	855
Sse9I	AATT	7 cut(s)	145, 286, 480, 860, 1037, 1059, 1223
SsiI	CCGC	7 cut(s)	22, 27, 30, 221, 337, 524, 920
SspI	AATATT	1 cut(s)	874
SspMI	CTAG	2 cut(s)	92, 1475
SstI	GAGCTC	3 cut(s)	126, 393, 1252
StyD4I	CCNGG	4 cut(s)	62, 345, 1143, 1207
StyI	CCWWGG	3 cut(s)	75, 108, 1053
TaaI	ACNGT	2 cut(s)	306, 1240
TaiI	ACGT	4 cut(s)	87, 736, 857, 1312
TaqI	TCGA	3 cut(s)	153, 192, 301
TasI	AATT	7 cut(s)	145, 286, 480, 860, 1037, 1059, 1223
TauI	GCSGC	2 cut(s)	29, 32
TfiI	GAWTC	2 cut(s)	130, 217
Tru1I	TTAA	3 cut(s)	768, 866, 1163
Tru9I	TTAA	3 cut(s)	768, 866, 1163
TscAI	CASTG	2 cut(s)	563, 984
TseI	GCWGC	7 cut(s)	39, 42, 372, 514, 668, 1148, 1430
TspDTI	ATGAA	6 cut(s)	543, 617, 873, 1181, 1470, 1478
TspRI	CASTG	2 cut(s)	563, 984
VpaK11BI	GGWCC	2 cut(s)	1031, 1076
XapI	RAATTY	1 cut(s)	1059
XceI	RCATGY	3 cut(s)	461, 626, 1266
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1229
XmiI	GTMKAC	1 cut(s)	925
XspI	CTAG	2 cut(s)	92, 1475

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.