pycom06g11980

Belongs to the mitochondrial carrier (TC 2.A.29) family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr6
Physical Location & Seq
Reverse (-)
17164577 .. 17166513
1937 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom06g11980.4

Sequence Viewer

Length: 1338 bp
ATGCTGAGGATCTTGGGTATTTGGATTATTCTCAGATCGAGGCCGGATTGTCGGCCCTTCAGATTCCGCCGGAATACAAGTGTCCGGGACGCCAATGATCTTCTGAAGGTCTGTGATGCTAACAGAGATGGAAGGGTCGATTATCTTGAGTTCCGGCGGTACATGGATGACAAGGAGCTCGAGCTCTACCGCATTTTTCAGGCCATTGATGTTGAGCACAACGGCTGCATTCTGCCCGAGGAGCTTTGGGATGCCCTTGTCAAGGCTGGGATTGAAATGGATGATGAGGAACTTGCGCGTTTTGTGGAGCATGTTGATAAGGATAACAATGGAATTATAACTTTTGAAGAATGGAGAGATTTTCTTCTACTTTATCCGCATGAAGCAACAATTGAGAACATATATCATCACTGGGAAAGGGTGTTTCTTGTGGATATTGGAGAGCAGGCTGTTATTCCAGAAGGAATTGGTAGGCATGTTCATAGGAGCAGATACTTTATTGCAGGGGCTGTAGCTGGAGCCGCCTCTCGTACTGCCACCGCTCCTCTTGATCGCTTGAAAGTGGTTTTGCAAGTTCAGACATCTCGTGCTTCTGTAGTACCAGCTATCAAGAAGATACTGAAGGATGACGGTATTCTGGGGTTTTTCCGAGGTAACGGAATAAATGTTGTGAAGGTAGCACCTGAAAGTGCCATCAAGTTCTATACTTATGAAATGTTAAAGAAAGTCATTGGAGATAATATGGGGGCAGACGAGGGAGATATTGGTACTGCTGGTAGACTTTTGGCTGGTGGTATGGCAGGTGCAGTGGCACAAACTTCTATATATCCCTTGGATCTTGTGAAAACTCGGTTACAGACTTGCACTTCAGAAGCTGGAAAGAGTCCTCGGTTGAGGACATTAACTAAAGAAATATGGATTCATGAGGGACCTCGGGCCTTCTATAAAGGTCTGTGTCCGTCACTTCTTGGGATTGTTCCCTACGCTGGCATCGACCTTGCGACCTATGAGACCTTAAAAGATATGTCAAAGACATATTTTCTTCACGATAATAGCGAACCTGGTCCTCTTATTCAGCTGGGATGTGGGACAGTATCTGGAGCTCTAGGAGCAACATGTGTTTATCCATTGCAGGTTATCCGAACAAGATTGCAAGCTCAACGTTCTAATACAGCTACTGCATATAAGGGAATGTCTGATGTATTCTGGAGAACCCTTCAACACGAAGGCTATAGAGGTTTCTACAAGGGATTGTTTCCAAATCTTCTCAAAGTTGTTCCAGCTGCAAGCATTACATATATGGTATATGAAGCCATGAAAAAGAAACTAGATCTGTAG

Protein Analysis

446

Amino Acids

50.1

Weight (kDa)

8.05

Isoelectric Point (pI)

36.91

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 338
AarI CACCTGC 1 cut(s) 791
Acc36I ACCTGC 2 cut(s) 791, 1123
AccBSI CCGCTC 1 cut(s) 542
AccI GTMKAC 1 cut(s) 778
AccII CGCG 1 cut(s) 298
AciI CCGC 6 cut(s) 67, 157, 190, 377, 522, 540
AclI AACGTT 1 cut(s) 1162
AclWI GGATC 2 cut(s) 17, 843
AcuI CTGAAG 4 cut(s) 43, 125, 641, 852
AcyI GRCGYC 1 cut(s) 90
AfaI GTAC 4 cut(s) 161, 532, 600, 769
AfiI CCNNNNNNNGG 2 cut(s) 262, 986
AflIII ACRYGT 1 cut(s) 1115
AgsI TTSAA 4 cut(s) 275, 347, 559, 1220
AjnI CCWGG 1 cut(s) 1060
Alw21I GWGCWC 4 cut(s) 180, 186, 219, 1105
Alw26I GTCTC 1 cut(s) 1004
AlwI GGATC 2 cut(s) 17, 843
AlwNI CAGNNNCTG 4 cut(s) 509, 875, 1097, 1178
Ama87I CYCGRG 3 cut(s) 179, 236, 933
AoxI GGCC 4 cut(s) 41, 53, 201, 936
ApeKI GCWGC 2 cut(s) 225, 1283
AspLEI GCGC 1 cut(s) 298
AspS9I GGNCC 4 cut(s) 54, 929, 936, 1064
AsuC2I CCSGG 1 cut(s) 86
AvaI CYCGRG 3 cut(s) 179, 236, 933
AvaII GGWCC 2 cut(s) 929, 1064
BanII GRGCYC 3 cut(s) 180, 186, 1105
BauI CACGAG 1 cut(s) 585
Bbv12I GWGCWC 4 cut(s) 180, 186, 219, 1105
BbvCI CCTCAGC 1 cut(s) 5
BbvI GCAGC 2 cut(s) 212, 1270
BccI CCATC 2 cut(s) 122, 701
BceAI ACGGC 1 cut(s) 238
BciT130I CCWGG 1 cut(s) 1062
BcnI CCSGG 1 cut(s) 86
BcoDI GTCTC 1 cut(s) 1004
BfaI CTAG 2 cut(s) 1106, 1328
BfmI CTRYAG 4 cut(s) 510, 594, 1231, 1334
BfuAI ACCTGC 2 cut(s) 791, 1123
BglII AGATCT 1 cut(s) 1330
BisI GCNGC 3 cut(s) 226, 522, 1284
BlsI GCNGC 3 cut(s) 227, 523, 1285
Bme1390I CCNGG 2 cut(s) 86, 1062
Bme18I GGWCC 2 cut(s) 929, 1064
BmeT110I CYCGRG 3 cut(s) 179, 236, 933
BmgT120I GGNCC 4 cut(s) 54, 929, 936, 1064
BmiI GGNNCC 2 cut(s) 520, 930
BmrFI CCNGG 2 cut(s) 86, 1062
BmrI ACTGGG 1 cut(s) 421
BmsI GCATC 3 cut(s) 106, 241, 999
BmuI ACTGGG 1 cut(s) 421
BpmI CTGGAG 3 cut(s) 537, 1119, 1228
Bpu10I CCTNAGC 1 cut(s) 5
BpuEI CTTGAG 1 cut(s) 167
BpuMI CCSGG 1 cut(s) 86
BsaHI GRCGYC 1 cut(s) 90
BsaI GGTCTC 1 cut(s) 1004
BsaJI CCNNGG 5 cut(s) 237, 649, 831, 887, 932
Bsc4I CCNNNNNNNGG 2 cut(s) 262, 986
Bse1I ACTGG 1 cut(s) 416
Bse3DI GCAATG 1 cut(s) 1127
BseBI CCWGG 1 cut(s) 1062
BseDI CCNNGG 5 cut(s) 237, 649, 831, 887, 932
BseGI GGATG 5 cut(s) 172, 256, 286, 631, 1088
BseLI CCNNNNNNNGG 2 cut(s) 262, 986
BseMI GCAATG 1 cut(s) 1127
BseMII CTCAG 1 cut(s) 46
BseNI ACTGG 1 cut(s) 416
BseRI GAGGAG 2 cut(s) 254, 534
BseXI GCAGC 2 cut(s) 212, 1270
BseYI CCCAGC 2 cut(s) 266, 1078
BsgI GTGCAG 1 cut(s) 825
Bsh1236I CGCG 1 cut(s) 298
BshFI GGCC 4 cut(s) 43, 55, 203, 938
BsiHKAI GWGCWC 4 cut(s) 180, 186, 219, 1105
BsiHKCI CYCGRG 3 cut(s) 179, 236, 933
BsiSI CCGG 4 cut(s) 44, 70, 85, 154
BslFI GGGAC 3 cut(s) 101, 942, 1102
BslI CCNNNNNNNGG 2 cut(s) 262, 986
BsmAI GTCTC 1 cut(s) 1004
BsmFI GGGAC 3 cut(s) 101, 942, 1102
BsmI GAATGC 1 cut(s) 228
BsnI GGCC 4 cut(s) 43, 55, 203, 938
Bso31I GGTCTC 1 cut(s) 1004
BsoBI CYCGRG 3 cut(s) 179, 236, 933
Bsp1286I GDGCHC 4 cut(s) 180, 186, 219, 1105
Bsp143I GATC 6 cut(s) 9, 35, 97, 550, 835, 1330
BspACI CCGC 6 cut(s) 67, 157, 190, 377, 522, 540
BspANI GGCC 4 cut(s) 43, 55, 203, 938
BspCNI CTCAG 1 cut(s) 45
BspFNI CGCG 1 cut(s) 298
BspHI TCATGA 1 cut(s) 922
BspLI GGNNCC 2 cut(s) 520, 930
BspMI ACCTGC 2 cut(s) 791, 1123
BspPI GGATC 2 cut(s) 17, 843
BspTNI GGTCTC 1 cut(s) 1004
BsrBI CCGCTC 1 cut(s) 542
BsrDI GCAATG 1 cut(s) 1127
BsrI ACTGG 1 cut(s) 416
BssECI CCNNGG 5 cut(s) 237, 649, 831, 887, 932
BssMI GATC 6 cut(s) 9, 35, 97, 550, 835, 1330
BssNI GRCGYC 1 cut(s) 90
BssSI CACGAG 1 cut(s) 585
BssT1I CCWWGG 1 cut(s) 831
Bst2BI CACGAG 1 cut(s) 585
Bst2UI CCWGG 1 cut(s) 1062
Bst4CI ACNGT 2 cut(s) 632, 1093
BstACI GRCGYC 1 cut(s) 90
BstC8I GCNNGC 4 cut(s) 447, 988, 1155, 1288
BstDEI CTNAG 2 cut(s) 5, 32
BstENI CCTNNNNNAGG 1 cut(s) 260
BstF5I GGATG 5 cut(s) 172, 256, 286, 631, 1088
BstFNI CGCG 1 cut(s) 298
BstHHI GCGC 1 cut(s) 298
BstKTI GATC 6 cut(s) 12, 38, 100, 553, 838, 1333
BstMAI GTCTC 1 cut(s) 1004
BstMBI GATC 6 cut(s) 9, 35, 97, 550, 835, 1330
BstMWI GCNNNNNNNGC 3 cut(s) 241, 521, 1109
BstNI CCWGG 1 cut(s) 1062
BstNSI RCATGY 3 cut(s) 314, 479, 1119
BstSCI CCNGG 2 cut(s) 84, 1060
BstSFI CTRYAG 4 cut(s) 510, 594, 1231, 1334
BstUI CGCG 1 cut(s) 298
BstV1I GCAGC 2 cut(s) 212, 1270
BstX2I RGATCY 3 cut(s) 9, 835, 1330
BstYI RGATCY 3 cut(s) 9, 835, 1330
BsuRI GGCC 4 cut(s) 43, 55, 203, 938
BtsCI GGATG 5 cut(s) 172, 256, 286, 631, 1088
BtsI GCAGTG 1 cut(s) 813
BtsIMutI CAGTG 2 cut(s) 409, 813
BveI ACCTGC 2 cut(s) 791, 1123
Cac8I GCNNGC 4 cut(s) 447, 988, 1155, 1288
CaiI CAGNNNCTG 4 cut(s) 509, 875, 1097, 1178
CciI TCATGA 1 cut(s) 922
CfoI GCGC 1 cut(s) 298
Cfr13I GGNCC 4 cut(s) 54, 929, 936, 1064
CseI GACGC 1 cut(s) 98
CsiI ACCWGGT 1 cut(s) 1060
Csp6I GTAC 4 cut(s) 160, 531, 599, 768
CviAII CATG 7 cut(s) 163, 311, 380, 476, 923, 1116, 1315
CviQI GTAC 4 cut(s) 160, 531, 599, 768
DdeI CTNAG 2 cut(s) 5, 32
DpnI GATC 6 cut(s) 11, 37, 99, 552, 837, 1332
DpnII GATC 6 cut(s) 9, 35, 97, 550, 835, 1330
EciI GGCGGA 1 cut(s) 56
Ecl136II GAGCTC 3 cut(s) 178, 184, 1103
Eco130I CCWWGG 1 cut(s) 831
Eco24I GRGCYC 3 cut(s) 180, 186, 1105
Eco31I GGTCTC 1 cut(s) 1004
Eco47I GGWCC 2 cut(s) 929, 1064
Eco53kI GAGCTC 3 cut(s) 178, 184, 1103
Eco57I CTGAAG 4 cut(s) 43, 125, 641, 852
Eco88I CYCGRG 3 cut(s) 179, 236, 933
EcoICRI GAGCTC 3 cut(s) 178, 184, 1103
EcoNI CCTNNNNNAGG 1 cut(s) 260
EcoO109I RGGNCCY 1 cut(s) 929
EcoRII CCWGG 1 cut(s) 1060
EcoT14I CCWWGG 1 cut(s) 831
EcoT38I GRGCYC 3 cut(s) 180, 186, 1105
ErhI CCWWGG 1 cut(s) 831
FaeI CATG 7 cut(s) 166, 314, 383, 479, 926, 1119, 1318
FaqI GGGAC 3 cut(s) 101, 942, 1102
FatI CATG 7 cut(s) 162, 310, 379, 475, 922, 1115, 1314
FblI GTMKAC 1 cut(s) 778
Fnu4HI GCNGC 3 cut(s) 226, 522, 1284
FokI GGATG 5 cut(s) 179, 263, 293, 638, 1095
FriOI GRGCYC 3 cut(s) 180, 186, 1105
Fsp4HI GCNGC 3 cut(s) 226, 522, 1284
FspBI CTAG 2 cut(s) 1106, 1328
GlaI GCGC 1 cut(s) 297
GluI GCNGC 3 cut(s) 226, 522, 1284
GsaI CCCAGC 2 cut(s) 270, 1082
GsuI CTGGAG 3 cut(s) 537, 1119, 1228
HaeIII GGCC 4 cut(s) 43, 55, 203, 938
HapII CCGG 4 cut(s) 44, 70, 85, 154
HgaI GACGC 1 cut(s) 98
HhaI GCGC 1 cut(s) 298
Hin1I GRCGYC 1 cut(s) 90
Hin1II CATG 7 cut(s) 166, 314, 383, 479, 926, 1119, 1318
Hin6I GCGC 1 cut(s) 296
HinP1I GCGC 1 cut(s) 296
HinfI GANTC 3 cut(s) 63, 883, 919
HpaII CCGG 4 cut(s) 44, 70, 85, 154
Hpy166II GTNNAC 1 cut(s) 779
Hpy188I TCNGA 8 cut(s) 35, 62, 105, 579, 650, 871, 1142, 1198
Hpy188III TCNNGA 8 cut(s) 146, 458, 548, 610, 923, 1046, 1098, 1207
Hpy8I GTNNAC 1 cut(s) 779
HpyAV CCTTC 9 cut(s) 67, 100, 126, 455, 616, 667, 949, 1220, 1226
HpyCH4III ACNGT 2 cut(s) 632, 1093
HpyCH4IV ACGT 1 cut(s) 1162
HpyCH4V TGCA 9 cut(s) 228, 503, 571, 806, 864, 1132, 1153, 1181, 1286
HpyF10VI GCNNNNNNNGC 3 cut(s) 241, 521, 1109
HpyF3I CTNAG 2 cut(s) 5, 32
HpySE526I ACGT 1 cut(s) 1162
Hsp92I GRCGYC 1 cut(s) 90
Hsp92II CATG 7 cut(s) 166, 314, 383, 479, 926, 1119, 1318
HspAI GCGC 1 cut(s) 296
Kzo9I GATC 6 cut(s) 9, 35, 97, 550, 835, 1330
LmnI GCTCC 8 cut(s) 175, 241, 307, 486, 518, 547, 1100, 1109
Lsp1109I GCAGC 2 cut(s) 212, 1270
LweI GCATC 3 cut(s) 106, 241, 999
MabI ACCWGGT 1 cut(s) 1060
MaeI CTAG 2 cut(s) 1106, 1328
MaeII ACGT 1 cut(s) 1162
MaeIII GTNAC 3 cut(s) 653, 852, 960
MalI GATC 6 cut(s) 11, 37, 99, 552, 837, 1332
MbiI CCGCTC 1 cut(s) 542
MboI GATC 6 cut(s) 9, 35, 97, 550, 835, 1330
MboII GAAGA 6 cut(s) 92, 356, 359, 625, 1034, 1256
MfeI CAATTG 1 cut(s) 390
MflI RGATCY 3 cut(s) 9, 835, 1330
MhlI GDGCHC 4 cut(s) 180, 186, 219, 1105
MluCI AATT 3 cut(s) 333, 390, 465
MlyI GAGTC 1 cut(s) 892
MseI TTAA 3 cut(s) 719, 902, 1016
MspA1I CMGCKG 2 cut(s) 1078, 1283
MspI CCGG 4 cut(s) 44, 70, 85, 154
MspR9I CCNGG 2 cut(s) 86, 1062
MunI CAATTG 1 cut(s) 390
Mva1269I GAATGC 1 cut(s) 228
MvaI CCWGG 1 cut(s) 1062
MvnI CGCG 1 cut(s) 298
MwoI GCNNNNNNNGC 3 cut(s) 241, 521, 1109
NciI CCSGG 1 cut(s) 86
NdeII GATC 6 cut(s) 9, 35, 97, 550, 835, 1330
NlaIII CATG 7 cut(s) 166, 314, 383, 479, 926, 1119, 1318
NlaIV GGNNCC 2 cut(s) 520, 930
NmuCI GTSAC 1 cut(s) 960
NspI RCATGY 3 cut(s) 314, 479, 1119
PaeR7I CTCGAG 1 cut(s) 179
PagI TCATGA 1 cut(s) 922
PaqCI CACCTGC 1 cut(s) 791
PciI ACATGT 1 cut(s) 1115
PcsI WCGNNNNNNNCGW 2 cut(s) 990, 1053
PctI GAATGC 1 cut(s) 228
PfeI GAWTC 2 cut(s) 63, 919
PfoI TCCNGGA 1 cut(s) 84
PkrI GCNGC 3 cut(s) 227, 523, 1285
PleI GAGTC 1 cut(s) 891
PpsI GAGTC 1 cut(s) 891
PpuMI RGGWCCY 1 cut(s) 929
PscI ACATGT 1 cut(s) 1115
PsiI TTATAA 1 cut(s) 338
Psp124BI GAGCTC 3 cut(s) 180, 186, 1105
Psp1406I AACGTT 1 cut(s) 1162
Psp5II RGGWCCY 1 cut(s) 929
Psp6I CCWGG 1 cut(s) 1060
PspFI CCCAGC 2 cut(s) 266, 1078
PspGI CCWGG 1 cut(s) 1060
PspN4I GGNNCC 2 cut(s) 520, 930
PspPI GGNCC 4 cut(s) 54, 929, 936, 1064
PspPPI RGGWCCY 1 cut(s) 929
PspXI VCTCGAGB 1 cut(s) 179
PstNI CAGNNNCTG 4 cut(s) 509, 875, 1097, 1178
PsuI RGATCY 3 cut(s) 9, 835, 1330
PvuII CAGCTG 2 cut(s) 1078, 1283
RsaI GTAC 4 cut(s) 161, 532, 600, 769
RsaNI GTAC 4 cut(s) 160, 531, 599, 768
SacI GAGCTC 3 cut(s) 180, 186, 1105
SaqAI TTAA 3 cut(s) 719, 902, 1016
SatI GCNGC 3 cut(s) 226, 522, 1284
Sau3AI GATC 6 cut(s) 9, 35, 97, 550, 835, 1330
Sau96I GGNCC 4 cut(s) 54, 929, 936, 1064
SchI GAGTC 1 cut(s) 892
ScrFI CCNGG 2 cut(s) 86, 1062
SduI GDGCHC 4 cut(s) 180, 186, 219, 1105
SexAI ACCWGGT 1 cut(s) 1060
SfaNI GCATC 3 cut(s) 106, 241, 999
SfcI CTRYAG 4 cut(s) 510, 594, 1231, 1334
Sfr274I CTCGAG 1 cut(s) 179
SinI GGWCC 2 cut(s) 929, 1064
SlaI CTCGAG 1 cut(s) 179
SmlI CTYRAG 2 cut(s) 146, 179
SmoI CTYRAG 2 cut(s) 146, 179
Sse9I AATT 3 cut(s) 333, 390, 465
SsiI CCGC 6 cut(s) 67, 157, 190, 377, 522, 540
SspMI CTAG 2 cut(s) 1106, 1328
SstI GAGCTC 3 cut(s) 180, 186, 1105
StyD4I CCNGG 2 cut(s) 84, 1060
StyI CCWWGG 1 cut(s) 831
TaaI ACNGT 2 cut(s) 632, 1093
TaiI ACGT 1 cut(s) 1165
TaqI TCGA 4 cut(s) 38, 138, 180, 993
TasI AATT 3 cut(s) 333, 390, 465
TauI GCSGC 1 cut(s) 524
TfiI GAWTC 2 cut(s) 63, 919
Tru1I TTAA 3 cut(s) 719, 902, 1016
Tru9I TTAA 3 cut(s) 719, 902, 1016
TscAI CASTG 2 cut(s) 416, 813
TseFI GTSAC 1 cut(s) 960
TseI GCWGC 2 cut(s) 225, 1283
Tsp45I GTSAC 1 cut(s) 960
TspDTI ATGAA 6 cut(s) 396, 470, 726, 911, 1323, 1331
TspGWI ACGGA 2 cut(s) 672, 948
TspRI CASTG 2 cut(s) 416, 813
VpaK11BI GGWCC 2 cut(s) 929, 1064
XagI CCTNNNNNAGG 1 cut(s) 260
XceI RCATGY 3 cut(s) 314, 479, 1119
XhoI CTCGAG 1 cut(s) 179
XmiI GTMKAC 1 cut(s) 778
XspI CTAG 2 cut(s) 1106, 1328
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.